Pregenerated sensors for PNMA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046204Ensembl transcript IDs: ENSMUST00000089236.11, ENSMUST00000122431.3
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACGCCTGCAGGATGCACAAGGCTGATGCAGTGGTGGGCAACATaGCATCAGTGTTCTGAAACATGCAGGAAGCTGATGGACTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: QTPAGCTRLMQWWAT*HQCSETCRKLMDWP Trigger: AGGCCAGTCCATCAGCTTCCTGCATGTTTCAGAACACTGATGTCATGTTGCCCACCACTGCATCAGCCTTGTGCATCCTGCAGGCGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 90 bp | ATGCACAAGGCTGATGCAGTGGTGGGCAACATGACATCAGTGTTCTaGAACATGCAGGAAGCTGATGGACTGGCCTGCAGCTTGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: MHKADAVVGNMTSVF*NMQEADGLACSLHQ Trigger: CTGGTGCAAGCTGCAGGCCAGTCCATCAGCTTCCTGCATGTTTCAGAACACTGATGTCATGTTGCCCACCACTGCATCAGCCTTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR GCA 90 bp | GCCCGAGCTCTGCCTGGCAGGCAACTAAGCAGTGTTTGTTTATGGTaGCCTAGTACTCTTGACCTGGCACACATACTCACAAGGCGCTAT | + |
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Preference number: 1 (lower is better) Translates to: ARALPGRQLSSVCLW*PSTLDLAHILTRRY Trigger: ATAGCGCCTTGTGAGTATGTGTGCCAGGTCAAGAGTACTAGGGCACCATAAACAAACACTGCTTAGTTGCCTGCCAGGCAGAGCTCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR GCA 90 bp | ATGAAGTGTACCACAAGCCCCACCCCTCCTCCACACACACATACATaGATGCAAGCGCACACACACACACACCCTATAAAGAGTAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: MKCTTSPTPPPHTHT*MQAHTHTHPIKSRL Trigger: CAACCTACTCTTTATAGGGTGTGTGTGTGTGTGCGCTTGCATGCATGTATGTGTGTGTGGAGGAGGGGTGGGGCTTGTGGTACACTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 90 bp | TGCGATCTGAACTCCTCCAAAAGAATAGCAAATGTGCTTAATGGCTaGGCATCCCTCCAGCCCCTGCCTGGCCAATTCCTATCTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: CDLNSSKRIANVLNG*ASLQPLPGQFLSPV Trigger: AACAGGAGATAGGAATTGGCCAGGCAGGGGCTGGAGGGATGCTCAGCCATTAAGCACATTTGCTATTCTTTTGGAGGAGTTCAGATCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR CCA 90 bp | AAAGCTATTCCCAGGAACATAATGCCACGTGGAGTCAGGCTAGAGTaGTCAAGGACAATCCCATCACTGACATCACTGTGGCTGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: KAIPRNIMPRGVRLE*SRTIPSLTSLWLDS Trigger: ACTGTCCAGCCACAGTGATGTCAGTGATGGGATTGTCCTTGACCACTCTAGCCTGACTCCACGTGGCATTATGTTCCTGGGAATAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CCA 90 bp | ACCTTCCAGTCTTTCTTGGGTAGAGGGGACAGAGCAGATTTTTACTaGGGCTACAAGGTCTGTAGAACCTTGGGAACAAGACAAGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: TFQSFLGRGDRADFY*GYKVCRTLGTRQGF Trigger: GAACCCTTGTCTTGTTCCCAAGGTTCTACAGACCTTGTAGCCCCAGTAAAAATCTGCTCTGTCCCCTCTACCCAAGAAAGACTGGAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 90 bp | TCTTGGATTGTTCCATCCTTAAGGGTTAGGAGTGGAGATAAGACTTaGGGTGAGAGTCCTGGGAGGAGTTTGTTCAAACCATGGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: SWIVPSLRVRSGDKT*GESPGRSLFKPWEQ Trigger: CTGTTCCCATGGTTTGAACAAACTCCTCCCAGGACTCTCACCTCAAGTCTTATCTCCACTCCTAACCCTTAAGGATGGAACAATCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 90 bp | CAAAGAGACCAGAAGAAGGTGTTGGATCCCCGTTATAGAGAATTGTaGACCACTACATGGGTGCTGCGATCTGAACTCCTCCAAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: QRDQKKVLDPRYREL*TTTWVLRSELLQKN Trigger: ATTCTTTTGGAGGAGTTCAGATCGCAGCACCCATGTAGTGGTTCACAATTCTCTATAACGGGGATCCAACACCTTCTTCTGGTCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR TCA 90 bp | AAGAGGGATATAGAGAAAAAGAAGAGAGAAAGCCACGCTTTCTTTTaGGTGGGTAGAGGGTTAGCATGCAGCCACATGGAGAGAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: KRDIEKKKRESHAFF*VGRGLACSHMERVK Trigger: TTTCACTCTCTCCATGTGGCTGCATGCTAACCCTCTACCCACTCAAAAGAAAGCGTGGCTTTCTCTCTTCTTTTTCTCTATATCCCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR CCA 90 bp | CTCCCTCTGAAGAGAATGGTAAGTAACTTGATCAACCGAGCTGTCTaGCCAACCCTGGTGTACTTAAAGGAAACTAAAGTTCAGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LPLKRMVSNLINRAV*PTLVYLKETKVQKF Trigger: AAACTTCTGAACTTTAGTTTCCTTTAAGTACACCAGGGTTGGCCAGACAGCTCGGTTGATCAAGTTACTTACCATTCTCTTCAGAGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR CCA 90 bp | TTATTTGTACATGTGTGTGTGTGTAAAATGACAGCTTGCAGGAATTaGTTCTCTCCTTCTACCCTATGGCTTATGGGGATCAAACATACC | + |
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Preference number: 1 (lower is better) Translates to: LFVHVCVCKMTACRN*FSPSTLWLMGIKHT Trigger: GGTATGTTTGATCCCCATAAGCCATAGGGTAGAAGGAGAGAACCAATTCCTGCAAGCTGTCATTTTACACACACACACATGTACAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR TCA 90 bp | CTTGTTTCCATACAATGGAAACAATCAAGAGAACATGCATTGAGCTaGCAACTATCACAAAAATACAAAGATCCTCAGTATATGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LVSIQWKQSREHALS*QLSQKYKDPQYMEG Trigger: CCCCTCCATATACTGAGGATCTTTGTATTTTTGTGATAGTTGTCAGCTCAATGCATGTTCTCTTGATTGTTTCCATTGTATGGAAACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | AGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGCCTCCAGCCCCTGCCTaGCCAATTCCTATCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RGQWEIRAPCEVHAPEDQPPAPA*PIPISC Trigger: ACAGGAGATAGGAATTGGCCAGGCAGGGGCTGGAGG...CTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR TCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGAAATGTGCTTAATGGCTaGGCATCCCTCCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGNVLNG*ASLQPL Trigger: CAGGGGCTGGAGGGATGCTCAGCCATTAAGCACATT...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAAACTTGTTCTGGGCCTCTaGTCTGGTTTCACTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AHHCQQGALFCSPGSVWKLVLGL*SGFTSE Trigger: CTCAGAAGTGAAACCAGAGCAGAGGCCCAGAACAAG...TTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAAACCTAAAGTCTTGTTCTaGGCCTCTGCTCTGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: AHHCQQGALFCSPGSVWKPKVLF*ASALVS Trigger: TGAAACCAGAGCAGAGGCCCAGAACAAGACTTTAGG...TTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CAA 90 bp | CCCTCCAGCCCCTGCCTGGCCAATTCCTATCTCCTGTTCACATTATaGCTCCCTCTGAAGAGAATGGTAAGTAACTTGATCAACCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSSPCLANSYLLFTL*LPLKRMVSNLINRA Trigger: AGCTCGGTTGATCAAGTTACTTACCATTCTCTTCAGAGGGAGCAATAATGTGAACAGGAGATAGGAATTGGCCAGGCAGGGGCTGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR TCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACTCAATTTGGGAGGTTaGGGCAGGAAGAATGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGLNLGG*GRKNVS Trigger: ACTGACATTCTTCCTGCCTCAACCTCCCAAATTGAG...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGAGAGTGAAACAGCTCAAAGTACTAAAGAATGTGCGCTTAGGCCTGAATGTGCTTAATGGCTaGGCATCCCTCCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: HMERVKQLKVLKNVRLGLNVLNG*ASLQPL Trigger: CAGGGGCTGGAGGGATGCTCAGCCATTAAGCACATT...CAGGCCTAAGCGCACATTCTTTAGTACTTTGAGCTGTTTCACTCTCTCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR GCA 90 bp | GCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGGCATCCCTCCAGCCCCTaGCTGGCCAATTCCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: ACMHVYHICKVPKETRRRHPSSP*LANSYL Trigger: GAGATAGGAATTGGCCAGGCAGGGGCTGGAGGGATG...CCTTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR CAA 90 bp | TCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTaGGAAACAAAAGCAAGCTTGGTGAACACGGAGATACTGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: SPLPAGSFVLQSWVS*ETKASLVNTEILRL Trigger: AAGTCTCAGTATCTCCGTGTTCACCAAGCTTGCTTTTGTTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CAA 90 bp | TTCAAGTCTGTGCACAATTACAGGGCTTTTGGAATAGGCTCACCATaGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: FKSVHNYRAFGIGSP*PAGSFVLQSWVSLE Trigger: TTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGCCTATTCCAAAAGCCCTGTAATTGTGCACAGACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAACCTCCAGCCCCTGCCTaGCCAATTCCTATCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHVCMCTTYAKYPKRPEEPPAPA*PIPISC Trigger: ACAGGAGATAGGAATTGGCCAGGCAGGGGCTGGAGG...TTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTGCTAACCACACAGGGATCTACCACAGGCTGCACACTAACTGTGCCCGACTGACCAGAAGGCAATaGTTTTCTCTTAATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: QLANHTGIYHRLHTNCARLTRRQ*FSLNET Trigger: AGTCTCATTAAGAGAAAACCATTGCCTTCTGGTCAG...TCGGGCACAGTTAGTGTGCAGCCTGTGGTAGATCCCTGTGTGGTTAGCAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGAAAGAAAAACCGAGATaGGGAACTAGTGGTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: SELLVRFMHQKTRDTFGMKEKPR*GTSGGM Trigger: CATCCCACCACTAGTTCCCCATCTCGGTTTTTCTTT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAAAGGGATCAAACATACCTaGAAGAGGGATATAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AHHCQQGALFCSPGSVWKGIKHT*KRDIEK Trigger: TTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCC...TTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CAA 90 bp | AAAGTCTTGTTCTGGGCCTCTGCTCTGGTTTCACTTCTGAGCATTTaGGTGCTGAGGCCATTTAACTTAGTTGACCTTTGCATCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: KVLFWASALVSLLSI*VLRPFNLVDLCIFP Trigger: GGGAAAGATGCAAAGGTCAACTAAGTTAAATGGCCTCAGCACCAAAATGCTCAGAAGTGAAACCAGAGCAGAGGCCCAGAACAAGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTAACCTTCAGGAAGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCCATGTGTACCACATATaGAAAGTACCCAAAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: KCNLQEGDNGKSELLVRFHVYHI*KVPKET Trigger: GGTCTCTTTGGGTACTTTGCATATGTGGTACACATG...GAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGAAGGTTACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR GCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGATTTATGTGTATGGTCTaGATGTATGCATGTGTACCA | + |
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Preference number: 2 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGFMCMV*MYACVP Trigger: TGGTACACATGCATACATGCAGACCATACACATAAA...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR CCA 90 bp | GCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGGAAAGAAAAACCGAGATaGGGAACTAGTGGTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: ACMHVYHICKVPKETRRRKEKPR*GTSGGM Trigger: CATCCCACCACTAGTTCCCCATCTCGGTTTTTCTTT...CCTTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR TCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGCTCAATTTGGGAGGTTaGGGCAGGAAGAATGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKLNLGG*GRKNVS Trigger: ACTGACATTCTTCCTGCCTCAACCTCCCAAATTGAG...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR TCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGAAATGGATTAGTGTCTaGCTGAAGGTCCCACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKKWISV*LKVPPS Trigger: TGAGGGTGGGACCTTCAGTCAGACACTAATCCATTT...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACAAGACAAGGGTTCAGTTAAGGATATGGGTGACAGGCATTCAATCAAGCATGTGTACCACATATaGAAAGTACCCAAAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: WEQDKGSVKDMGDRHSIKHVYHI*KVPKET Trigger: GGTCTCTTTGGGTACTTTGCATATGTGGTACACATG...CTTGATTGAATGCCTGTCACCCATATCCTTAACTGAACCCTTGTCTTGTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCTTAAAACTCAGGCATATAGGAAGCAGAAAACAACTCACGATTTCACTTCAGGAAGGGGACAATaGGAAATCAGAGCTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KLLKTQAYRKQKTTHDFTSGRGQ*EIRAPC Trigger: ACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGA...AGTGAAATCGTGAGTTGTTTTCTGCTTCCTATATGCCTGAGTTTTAAGGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCTTAAAACTCAGGCATATAGGAAGCAGAAAACAACTCACGATTTCACTACTCACAAGGCGCTATaGCTTTTCAAGTCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KLLKTQAYRKQKTTHDFTTHKAL*LFKSVH Trigger: GTGCACAGACTTGAAAAGCCATAGCGCCTTGTGAGT...AGTGAAATCGTGAGTTGTTTTCTGCTTCCTATATGCCTGAGTTTTAAGGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGAGGCCATTTAACTTAGTTGACCTTTGCATCTTTCCCTTTATGAAGTGTTTAACGCTTATGTTTTaGTTAGCTTGCAATGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VLRPFNLVDLCIFPFMKCLTLMF*LACNGR Trigger: CCTACCATTGCAAGCTAACCAAAACATAAGCGTTAA...ACACTTCATAAAGGGAAAGATGCAAAGGTCAACTAAGTTAAATGGCCTCAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR GCA 72 bp | GTGAGTGCCTTGCGTGTAGTTTGGGAAGCAGACGCCTaGAGGATGCACAAGGCTGATGCAGTGGTGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: VSALRVVWEADA*RMHKADAVVGN Trigger: GTTGCCCACCACTGCATCAGCCTTGTGCATCCTGCAGGCGTCTGCTTCCCAAACTACACGCAAGGCACTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 72 bp | GCTGATGCAGTGGTGGGCAACATGACATCAGTGTTCTaGAACATGCAGGAAGCTGATGGACTGGCCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ADAVVGNMTSVF*NMQEADGLACS Trigger: GCTGCAGGCCAGTCCATCAGCTTCCTGCATGTTTCAGAACACTGATGTCATGTTGCCCACCACTGCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR GCA 72 bp | ACCACAAGCCCCACCCCTCCTCCACACACACATACATaGATGCAAGCGCACACACACACACACCCTATAAAG | + |
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Preference number: 3 (lower is better) Translates to: TTSPTPPPHTHT*MQAHTHTHPIK Trigger: CTTTATAGGGTGTGTGTGTGTGTGCGCTTGCATGCATGTATGTGTGTGTGGAGGAGGGGTGGGGCTTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CCA 72 bp | GCGACGCACAGAGGGTGGATCCCTAAAGTCTTGTTCTaGGCCTCTGCTCTGGTTTCACTTCTGAGCATTTTG | + |
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Preference number: 3 (lower is better) Translates to: ATHRGWIPKVLF*ASALVSLLSIL Trigger: CAAAATGCTCAGAAGTGAAACCAGAGCAGAGGCCCAGAACAAGACTTTAGGGATCCACCCTCTGTGCGTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CCA 72 bp | CCCAGGAACATAATGCCACGTGGAGTCAGGCTAGAGTaGTCAAGGACAATCCCATCACTGACATCACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PRNIMPRGVRLE*SRTIPSLTSLW Trigger: CCACAGTGATGTCAGTGATGGGATTGTCCTTGACCACTCTAGCCTGACTCCACGTGGCATTATGTTCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 72 bp | CAACATGACATCAGTGTTCTGAAACATGCAGGAAGCTaGTGGACTGGCCTGCAGCTTGCACCAGGAACACCT | + |
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Preference number: 3 (lower is better) Translates to: QHDISVLKHAGS*WTGLQLAPGTP Trigger: AGGTGTTCCTGGTGCAAGCTGCAGGCCAGTCCATCAGCTTCCTGCATGTTTCAGAACACTGATGTCATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 72 bp | GCAGGATGCACAAGGCTGATGCAGTGGTGGGCAACATaGCATCAGTGTTCTGAAACATGCAGGAAGCTGATG | + |
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Preference number: 3 (lower is better) Translates to: AGCTRLMQWWAT*HQCSETCRKLM Trigger: CATCAGCTTCCTGCATGTTTCAGAACACTGATGTCATGTTGCCCACCACTGCATCAGCCTTGTGCATCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR CCA 72 bp | CAACGGCAAAGCTATTCCCAGGAACATAATGCCACGTaGAGTCAGGCTAGAGTGGTCAAGGACAATCCCATC | + |
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Preference number: 3 (lower is better) Translates to: QRQSYSQEHNAT*SQARVVKDNPI Trigger: GATGGGATTGTCCTTGACCACTCTAGCCTGACTCCACGTGGCATTATGTTCCTGGGAATAGCTTTGCCGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
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| 3UTR TCA 72 bp | AACTCCTCCAAAAGAATAGCAAATGTGCTTAATGGCTaGGCATCCCTCCAGCCCCTGCCTGGCCAATTCCTA | + |
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Preference number: 3 (lower is better) Translates to: NSSKRIANVLNG*ASLQPLPGQFL Trigger: TAGGAATTGGCCAGGCAGGGGCTGGAGGGATGCTCAGCCATTAAGCACATTTGCTATTCTTTTGGAGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| 3UTR TCA 72 bp | TTCAGGAAGGGGACAATGGGAAATCAGAGCTCCTTGTaGGGTTCATGCACCAGAAGACCAGGGACACTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRKGTMGNQSSL*GSCTRRPGTLL Trigger: CAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR GCA 72 bp | CAAATGTGCTTAATGGCTGAGCATCCCTCCAGCCCCTaGCTGGCCAATTCCTATCTCCTGTTCACATTATTG | + |
|
Preference number: 3 (lower is better) Translates to: QMCLMAEHPSSP*LANSYLLFTLL Trigger: CAATAATGTGAACAGGAGATAGGAATTGGCCAGGCAGGGGCTGGAGGGATGCTCAGCCATTAAGCACATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR GCA 72 bp | CTGCCTGGCAGGCAACTAAGCAGTGTTTGTTTATGGTaGCCTAGTACTCTTGACCTGGCACACATACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LPGRQLSSVCLW*PSTLDLAHILT Trigger: TGTGAGTATGTGTGCCAGGTCAAGAGTACTAGGGCACCATAAACAAACACTGCTTAGTTGCCTGCCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CCA 72 bp | TGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTaGAATGCCTGGAAACTGCCTAGCCAGGTTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CEVHAPEDQGHF*NAWKLPSQVLF Trigger: GAAAAGAACCTGGCTAGGCAGTTTCCAGGCATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CCA 72 bp | TGGTGGGATGTTCCTCTAATCCCAGAACTCTCAATTTaGGAGGTTGAGGCAGGAAGAATGTCAGTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WWDVPLIPELSI*EVEAGRMSVQG Trigger: GCCTTGAACTGACATTCTTCCTGCCTCAACCTCCCAAATTGAGAGTTCTGGGATTAGAGGAACATCCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR-3UTR CAA 90 bp | CACATGGAGAGAGTGAAACAGCTCAAAGTACTAAAGAATGTGCGCTTAGGCCTGTCTCAATTTGGGAGGTaGAGGCAGGAAGAATGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HMERVKQLKVLKNVRLGLSQFGR*RQEECQ Trigger: CTGACATTCTTCCTGCCTCAACCTCCCAAATTGAGA...CAGGCCTAAGCGCACATTCTTTAGTACTTTGAGCTGTTTCACTCTCTCCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR TCA 72 bp | TGTTCCTCTAATCCCAGAACTCTCAATTTGGGAGGTTaGGGCAGGAAGAATGTCAGTTCAAGGCCAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSSNPRTLNLGG*GRKNVSSRPTW Trigger: CCAAGTTGGCCTTGAACTGACATTCTTCCTGCCTCAACCTCCCAAATTGAGAGTTCTGGGATTAGAGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR TCA 72 bp | GTTCCATCCTTAAGGGTTAGGAGTGGAGATAAGACTTaGGGTGAGAGTCCTGGGAGGAGTTTGTTCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLRVRSGDKT*GESPGRSLFKP Trigger: TGGTTTGAACAAACTCCTCCCAGGACTCTCACCTCAAGTCTTATCTCCACTCCTAACCCTTAAGGATGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CCA 72 bp | CATGCACCAGAAGACCAGGGACACTTTTGGAATGCCTaGAAACTGCCTAGCCAGGTTCTTTTCTTCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HAPEDQGHFWNA*KLPSQVLFFLK Trigger: CTTTAAGAAGAAAAGAACCTGGCTAGGCAGTTTCCAGGCATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CCA 72 bp | CTTTGGATAACAGCCATCCAGATAATTAGGTCTGAGTaGATAGTGGGTGGTGGGCAGAGGGATGAACACATA | + |
|
Preference number: 3 (lower is better) Translates to: LWITAIQIIRSE*IVGGGQRDEHI Trigger: TATGTGTTCATCCCTCTGCCCACCACCCACTATCCACTCAGACCTAATTATCTGGATGGCTGTTATCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGGTCTCAATTTGGGAGGTaGAGGCAGGAAGAATGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACMHVYHICKVPKETRRRSQFGR*RQEECQ Trigger: CTGACATTCTTCCTGCCTCAACCTCCCAAATTGAGA...CCTTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR TCA 72 bp | ATAGAGAAAAAGAAGAGAGAAAGCCACGCTTTCTTTTaGGTGGGTAGAGGGTTAGCATGCAGCCACATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IEKKKRESHAFF*VGRGLACSHME Trigger: CTCCATGTGGCTGCATGCTAACCCTCTACCCACTCAAAAGAAAGCGTGGCTTTCTCTCTTCTTTTTCTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CCA 72 bp | AAAAGCAAGCTTGGTGAACACGGAGATACTGAGACTTaGTCATTAGCACACTTGATACTACCTGCTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KSKLGEHGDTET*SLAHLILPAGC Trigger: ACACCCAGCAGGTAGTATCAAGTGTGCTAATGACCAAGTCTCAGTATCTCCGTGTTCACCAAGCTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGGCTCCTGTTCACATTATaGCTCCCTCTGAAGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: ACMHVYHICKVPKETRRRLLFTL*LPLKRM Trigger: CATTCTCTTCAGAGGGAGCAATAATGTGAACAGGAG...CCTTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAACAAGACAAGGGTTCAGTTAAGGATATGGGTGACAGGCATTCAATCAAGGAAACAAAAGCAAGCTaGGTGAACACGGAGATACTG | + |
|
Preference number: 3 (lower is better) Translates to: WEQDKGSVKDMGDRHSIKETKAS*VNTEIL Trigger: CAGTATCTCCGTGTTCACCAAGCTTGCTTTTGTTTC...CTTGATTGAATGCCTGTCACCCATATCCTTAACTGAACCCTTGTCTTGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR TCA 72 bp | CCTAATTCTAACACTATCCACAAATGGATTAGTGTCTaGCTGAAGGTCCCACCCTCAAGTGTAACCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PNSNTIHKWISV*LKVPPSSVTFR Trigger: CCTGAAGGTTACACTTGAGGGTGGGACCTTCAGTCAGACACTAATCCATTTGTGGATAGTGTTAGAATTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CCA 72 bp | CCAAAGTCAAGTCGATTAACAGTCACCAACTACTTCTaGAATACTTACCACAAATGTGGACGGCCAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PKSSRLTVTNYF*NTYHKCGRPAS Trigger: ACTAGCTGGCCGTCCACATTTGTGGTAAGTATTCCAGAAGTAGTTGGTGACTGTTAATCGACTTGACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR GCA 72 bp | ATTTTGGTGCTGAGGCCATTTAACTTAGTTGACCTTTaGATCTTTCCCTTTATGAAGTGTACCACAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILVLRPFNLVDL*IFPFMKCTTSP Trigger: GGGGCTTGTGGTACACTTCATAAAGGGAAAGATGCAAAGGTCAACTAAGTTAAATGGCCTCAGCACCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CCA 72 bp | AAGAGAATGGTAAGTAACTTGATCAACCGAGCTGTCTaGCCAACCCTGGTGTACTTAAAGGAAACTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KRMVSNLINRAV*PTLVYLKETKV Trigger: AACTTTAGTTTCCTTTAAGTACACCAGGGTTGGCCAGACAGCTCGGTTGATCAAGTTACTTACCATTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR TCA 72 bp | GGAGCATCCCGACTGGAATGTAAGTCTGTTACTTTGTaGCTTGTTTCCATACAATGGAAACAATCAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GASRLECKSVTL*LVSIQWKQSRE Trigger: TTCTCTTGATTGTTTCCATTGTATGGAAACAAGTCACAAAGTAACAGACTTACATTCCAGTCGGGATGCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR TCA 72 bp | AATCCCATCACTGACATCACTGTGGCTGGACAGTGTTaGGAAATATATTTCCGAAAGATAAACCATCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NPITDITVAGQC*EIYFRKINHHR Trigger: TCTGTGATGGTTTATCTTTCGGAAATATATTTCTCAACACTGTCCAGCCACAGTGATGTCAGTGATGGGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR TCA 72 bp | TTTCCATACAATGGAAACAATCAAGAGAACATGCATTaGGCTGACAACTATCACAAAAATACAAAGATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FPYNGNNQENMH*ADNYHKNTKIL Trigger: GAGGATCTTTGTATTTTTGTGATAGTTGTCAGCTCAATGCATGTTCTCTTGATTGTTTCCATTGTATGGAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGCTAACCACACAGGGATCTACCACAGGCTGCACACTAACTGTGCCCGAGCAGGGTGGGGTGGCTaGAGACACTCCCTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLANHTGIYHRLHTNCARAGWGG*RHSLML Trigger: AAGCATGAGGGAGTGTCTCCAGCCACCCCACCCTGC...TCGGGCACAGTTAGTGTGCAGCCTGTGGTAGATCCCTGTGTGGTTAGCAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR GCA 90 bp | GCTCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAAAATAACTCAGGGGACGTaGAGGGTGGGGTGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHHCQQGALFCSPGSVWKITQGT*RVGWLE Trigger: CTCCAGCCACCCCACCCTGCACGTCCCCTGAGTTAT...TTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGCACCAGCCATGACCTaGTCCAGGCGTACCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQWEIRAPCEVHAPEDQAPAMT*SRRTWS Trigger: TGACCAGGTACGCCTGGAGCAGGTCATGGCTGGTGC...CTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGAAAGGGCTCCTCCTCTaGGGCAGCTGCTGTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMKGLLL*GSCCAP Trigger: GGGAGCACAGCAGCTGCCCCAGAGGAGGAGCCCTTT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGATAACTCAGGGGACGTaGAGGGTGGGGTGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMITQGT*RVGWLE Trigger: CTCCAGCCACCCCACCCTGCACGTCCCCTGAGTTAT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGGCACCAGCCATGACCTaGTCCAGGCGTACCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMAPAMT*SRRTWS Trigger: TGACCAGGTACGCCTGGAGCAGGTCATGGCTGGTGC...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGTCCAGACACCTCCCTTaGCCTGTACCTCACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMSRHLP*PVPHWG Trigger: TCCCCAGTGAGGTACAGGGCAAGGGAGGTGTCTGGA...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGAGCCACGGAGGCTCTCTaGCACCCACCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGATEAL*HPPFLF Trigger: GAAAAGAAAAGGTGGGTGGCAGAGAGCCTCCGTGGC...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | GCTCACCATTGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTCAGTTTGGAAAGGATGGGCCATTCCTTaGCTATCTCAGTGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHHCQQGALFCSPGSVWKGWAIP*LSQWPV Trigger: AACAGGCCACTGAGATAGCCAAGGAATGGCCCATCC...TTTCCAAACTGACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CAA 72 bp | GTGCACAATTACAGGGCTTTTGGAATAGGCTCACCATaGCCAGCAGGGAGCTTTGTTCTGCAGTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHNYRAFGIGSP*PAGSFVLQSWV Trigger: GACCCAGGACTGCAGAACAAAGCTCCCTGCTGGCAATGGTGAGCCTATTCCAAAAGCCCTGTAATTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR TCA 90 bp | CACATGGAGAGAGTGAAACAGCTCAAAGTACTAAAGAATGTGCGCTTAGGCCTGCCTGTACTATGTGCATaGGGTCCAGGGCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HMERVKQLKVLKNVRLGLPVLCA*GPGQGH Trigger: GTGGCCCTGCCCTGGACCTCATGCACATAGTACAGG...CAGGCCTAAGCGCACATTCTTTAGTACTTTGAGCTGTTTCACTCTCTCCATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGATCAGCTGCAAAAAGGTaGGGAGTGGGCCCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGSAAKR*GVGPDL Trigger: AAGATCAGGGCCCACTCCCCACCTTTTTGCAGCTGA...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGAGCTTCTGGAATATCTTaGCTAGTAGCCGGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGASGIS*LVAGSC Trigger: GCAGCTACCGGCTACTAGGCAAGATATTCCAGAAGC...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGCTGGGGCAGCTGCTGTaGTCCCAGAGAATATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMLGQLL*SQRIFS Trigger: TGAGAATATTCTCTGGGAGCACAGCAGCTGCCCCAG...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGAGTGCTCCCAAACACCTaGTTAAAGGCCTCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGVLPNT*LKASRH Trigger: ATGTCTGGAGGCCTTTAAGCAGGTGTTTGGGAGCAC...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGTAACCTTCAGGAAGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCTCAGCTCCTGTAGCCTaGACCACAGAACGTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KCNLQEGDNGKSELLVRFSAPVA*TTERCR Trigger: TCGGCAACGTTCTGTGGTGCAGGCTACAGGAGCTGA...GAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGAAGGTTACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGATCACCTTCATCAGCTaGAAAAAGGTGGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQWEIRAPCEVHAPEDQITFIS*KKVGSG Trigger: CCCACTCCCCACCTTTTTGCAGCTGATGAAGGTGAT...CTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | GCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGGGCAGGGTGGGGTGGCTaGAGACACTCCCTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACMHVYHICKVPKETRRRAGWGG*RHSLML Trigger: AAGCATGAGGGAGTGTCTCCAGCCACCCCACCCTGC...CCTTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGTCAGCTGCAAAAAGGTaGGGAGTGGGCCCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMSAAKR*GVGPDL Trigger: AAGATCAGGGCCCACTCCCCACCTTTTTGCAGCTGA...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGGCTTCTGGAATATCTTaGCTAGTAGCCGGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMASGIS*LVAGSC Trigger: GCAGCTACCGGCTACTAGGCAAGATATTCCAGAAGC...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGTAACCTTCAGGAAGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCTGCCCTGTACCTCACTaGGGACCACAGACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCNLQEGDNGKSELLVRFCPVPH*GPQTYL Trigger: CAGATATGTCTGTGGTCCCCAGTGAGGTACAGGGCA...GAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGAAGGTTACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGATTTCTGCTTCAGGGATaGGCCATTCCTTGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGFLLQG*AIPWLS Trigger: AGATAGCCAAGGAATGGCCCATCCCTGAAGCAGAAA...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CAA 72 bp | CGGAGAGTTGAAGCAGCTTTAAGGCCTCCAAAGGCCTaGGAATTGGAGTTACAGATACTTAGGAGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVEAALRPPKA*ELELQILRSHQ Trigger: CTGGTGGCTCCTAAGTATCTGTAACTCCAATTCCAAGGCCTTTGGAGGCCTTAAAGCTGCTTCAACTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR TCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGCCTGTACTATGTGCATaGGGTCCAGGGCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKPVLCA*GPGQGH Trigger: GTGGCCCTGCCCTGGACCTCATGCACATAGTACAGG...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | CACATGGAGAGAGTGAAACAGCTCAAAGTACTAAAGAATGTGCGCTTAGGCCTGCTGGGGCAGCTGCTGTaGTCCCAGAGAATATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMERVKQLKVLKNVRLGLLGQLL*SQRIFS Trigger: TGAGAATATTCTCTGGGAGCACAGCAGCTGCCCCAG...CAGGCCTAAGCGCACATTCTTTAGTACTTTGAGCTGTTTCACTCTCTCCATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAAGACAAGGGTTCAGTTAAGGATATGGGTGACAGGCATTCAATCAAGGCCACGGAGGCTCTCTaGCACCCACCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WEQDKGSVKDMGDRHSIKATEAL*HPPFLF Trigger: GAAAAGAAAAGGTGGGTGGCAGAGAGCCTCCGTGGC...CTTGATTGAATGCCTGTCACCCATATCCTTAACTGAACCCTTGTCTTGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGAGAAACTCAGTGTCCTaGTTAGGGGTCTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SELLVRFMHQKTRDTFGMRNSVS*LGVLKI Trigger: GATCTTCAAGACCCCTAATCAGGACACTGAGTTTCT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGATCAGCTCCTGTAGCCTaGACCACAGAACGTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SACMHVYHICKVPKETRRSAPVA*TTERCR Trigger: TCGGCAACGTTCTGTGGTGCAGGCTACAGGAGCTGA...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | AACCGAGCTGTCTGGCCAACCCTGGTGTACTTAAAGGAAACTAAAGTTCAGAAGATCACCTTCATCAGCTaGAAAAAGGTGGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRAVWPTLVYLKETKVQKITFIS*KKVGSG Trigger: CCCACTCCCCACCTTTTTGCAGCTGATGAAGGTGAT...CTTCTGAACTTTAGTTTCCTTTAAGTACACCAGGGTTGGCCAGACAGCTCGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGATGCCCTGTACCTCACTaGGGACCACAGACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SACMHVYHICKVPKETRRCPVPH*GPQTYL Trigger: CAGATATGTCTGTGGTCCCCAGTGAGGTACAGGGCA...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | CTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGTGCTCCCAAACACCTaGTTAAAGGCCTCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHVCMCTTYAKYPKRPEEVLPNT*LKASRH Trigger: ATGTCTGGAGGCCTTTAAGCAGGTGTTTGGGAGCAC...TTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGGGATGGGCCATTCCTTaGCTATCTCAGTGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKGWAIP*LSQWPV Trigger: AACAGGCCACTGAGATAGCCAAGGAATGGCCCATCC...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| 3UTR CAA 72 bp | CCCTGCCTGGCCAATTCCTATCTCCTGTTCACATTATaGCTCCCTCTGAAGAGAATGGTAAGTAACTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PCLANSYLLFTL*LPLKRMVSNLI Trigger: GATCAAGTTACTTACCATTCTCTTCAGAGGGAGCAATAATGTGAACAGGAGATAGGAATTGGCCAGGCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGACCACCTTTTCTTTTCTaGTTCAGGGATGGGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SACMHVYHICKVPKETRRPPFLF*FRDGPF Trigger: GAATGGCCCATCCCTGAAGCAGAAAAGAAAAGGTGG...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAGAAACTCAGTGTCCTaGTTAGGGGTCTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SACMHVYHICKVPKETRRRNSVS*LGVLKI Trigger: GATCTTCAAGACCCCTAATCAGGACACTGAGTTTCT...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAACACTGGTGTTGTCCTaGTTCTGGAATATCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SACMHVYHICKVPKETRRTLVLS*FWNILP Trigger: AGGCAAGATATTCCAGAAGCAGGACAACACCAGTGT...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGCCACCTTTTCTTTTCTaGTTCAGGGATGGGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKPPFLF*FRDGPF Trigger: GAATGGCCCATCCCTGAAGCAGAAAAGAAAAGGTGG...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CCA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGTTTCTGCTTCAGGGATaGGCCATTCCTTGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKFLLQG*AIPWLS Trigger: AGATAGCCAAGGAATGGCCCATCCCTGAAGCAGAAA...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTTAAAACTCAGGCATATAGGAAGCAGAAAACAACTCACGATTTCACTACACTGGTGTTGTCCTaGTTCTGGAATATCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLKTQAYRKQKTTHDFTTLVLS*FWNILP Trigger: AGGCAAGATATTCCAGAAGCAGGACAACACCAGTGT...AGTGAAATCGTGAGTTGTTTTCTGCTTCCTATATGCCTGAGTTTTAAGGAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CAA 72 bp | GGGATGTCCAGAAGATCTGATGAACATACTAGACATTaGATAATAAAAGTGAGTGCCTTGCGTGTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMSRRSDEHTRH*IIKVSALRVVW Trigger: CCAAACTACACGCAAGGCACTCACTTTTATTATCAAATGTCTAGTATGTTCATCAGATCTTCTGGACATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| 3UTR CAA 72 bp | CATCCCGACTGGAATGTAAGTCTGTTACTTTGTGACTaGTTTCCATACAATGGAAACAATCAAGAGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HPDWNVSLLLCD*FPYNGNNQENM Trigger: CATGTTCTCTTGATTGTTTCCATTGTATGGAAACAAGTCACAAAGTAACAGACTTACATTCCAGTCGGGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089236.11 |
||
| CDS GCA 90 bp | AGACATTCCCCCACACTGATGGAAGGGTTGTCTGCCTGTACTATGTaGATGAGGTCCAGGGCAGGGCCACGGAGGCTCTCTGCCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHSPTLMEGLSACTM*MRSRAGPRRLSATH Trigger: GTGGGTGGCAGAGAGCCTCCGTGGCCCTGCCCTGGACCTCATGCACATAGTACAGGCAGACAACCCTTCCATCAGTGTGGGGGAATGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 90 bp | CTGTACTATGTGCATGAGGTCCAGGGCAGGGCCACGGAGGCTCTCTaGCACCCACCTTTTCTTTTCTGCTTCAGGGATGGGCCATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYYVHEVQGRATEAL*HPPFLFCFRDGPFL Trigger: AAGGAATGGCCCATCCCTGAAGCAGAAAAGAAAAGGTGGGTGGCAGAGAGCCTCCGTGGCCCTGCCCTGGACCTCATGCACATAGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CCA 90 bp | CACGGAGGCTCTCTGCCACCCACCTTTTCTTTTCTGCTTCAGGGATaGGCCATTCCTTGGCTATCTCAGTGGCCTGTTCCAACCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: HGGSLPPTFSFLLQG*AIPWLSQWPVPTRP Trigger: AGGTCTGGTTGGAACAGGCCACTGAGATAGCCAAGGAATGGCCCATCCCTGAAGCAGAAAAGAAAAGGTGGGTGGCAGAGAGCCTCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGAGAACGTTGCCGAGGTaGGCACCAGCCATGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SELLVRFMHQKTRDTFGMRTLPR*APAMTC Trigger: GCAGGTCATGGCTGGTGCCAACCTCGGCAACGTTCT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CCA 90 bp | TATCTCAGTGGCCTGTTCCAACCAGACCTCAAAGGGCTCCTCCTCTaGGGCAGCTGCTGTGCTCCCAGAGAATATTCTCATCTTACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YLSGLFQPDLKGLLL*GSCCAPREYSHLTV Trigger: TACTGTAAGATGAGAATATTCTCTGGGAGCACAGCAGCTGCCCCAGAGGAGGAGCCCTTTGAGGTCTGGTTGGAACAGGCCACTGAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CCA 90 bp | CTTCTTCTTCTTCCTCACGTATCACCTTCATCAGCTGCAAAAAGGTaGGGAGTGGGCCCTGATCTTTCAGCTCCTGTAGCCTGCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPHVSPSSAAKR*GVGPDLSAPVACTT Trigger: TGTGGTGCAGGCTACAGGAGCTGAAAGATCAGGGCCCACTCCCCACCTTTTTGCAGCTGATGAAGGTGATACGTGAGGAAGAAGAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | GGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACTCCTCCCTGCTCTCTaGTTCAAAGTAGGCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQWEIRAPCEVHAPEDQGLLPAL*FKVGVF Trigger: GAAGACGCCTACTTTGAACAAGAGAGCAGGGAGGAG...TCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGATTTCCCATTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | CTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAAGAACGTTGCCGAGGTaGGCACCAGCCATGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHVCMCTTYAKYPKRPEERTLPR*APAMTC Trigger: GCAGGTCATGGCTGGTGCCAACCTCGGCAACGTTCT...TTCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | CACATGGAGAGAGTGAAACAGCTCAAAGTACTAAAGAATGTGCGCTTAGGCCTGCTCCTCCCTGCTCTCTaGTTCAAAGTAGGCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMERVKQLKVLKNVRLGLLLPAL*FKVGVF Trigger: GAAGACGCCTACTTTGAACAAGAGAGCAGGGAGGAG...CAGGCCTAAGCGCACATTCTTTAGTACTTTGAGCTGTTTCACTCTCTCCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCTCCTTGTGAGGTTCATGCACCAGAAGACCAGGGACACTTTTGGAATGAAAGAGGTTCAGTCTTaGGAGAAACTCAGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SELLVRFMHQKTRDTFGMKEVQS*EKLSVL Trigger: CAGGACACTGAGTTTCTCCAAAGACTGAACCTCTTT...CATTCCAAAAGTGTCCCTGGTCTTCTGGTGCATGAACCTCACAAGGAGCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | CTATGGCTTATGGGGATCAAACATACCTGGAAGAGGGATATAGAGAAAAAGAAGGGGATGGGCCATTCCTaGGCTATCTCAGTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWLMGIKHTWKRDIEKKKGMGHS*AISVAC Trigger: ACAGGCCACTGAGATAGCCAAGGAATGGCCCATCCC...CTTCTTTTTCTCTATATCCCTCTTCCAGGTATGTTTGATCCCCATAAGCCATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGTAACCTTCAGGAAGGGGACAATGGGAAATCAGAGCTCCTTGTGAGGTTCAAGACAACACTGGTGTaGTCCTGCTTCTGGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: KCNLQEGDNGKSELLVRFKTTLV*SCFWNI Trigger: GATATTCCAGAAGCAGGACAACACCAGTGTTGTCTT...GAACCTCACAAGGAGCTCTGATTTCCCATTGTCCCCTTCCTGAAGGTTACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS TCA 90 bp | TCTTTTTCTAGAAAGAGGTTCAGTCTTTGGAGAAACTCAGTGTCCTaGTTAGGGGTCTTGAAGATCACTTTCCAGACACCTCCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSRKRFSLWRNSVS*LGVLKITFQTPPLP Trigger: GGGCAAGGGAGGTGTCTGGAAAGTGATCTTCAAGACCCCTAATCAGGACACTGAGTTTCTCCAAAGACTGAACCTCTTTCTAGAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | AACCGAGCTGTCTGGCCAACCCTGGTGTACTTAAAGGAAACTAAAGTTCAGAAGAAGACAACACTGGTGTaGTCCTGCTTCTGGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: NRAVWPTLVYLKETKVQKKTTLV*SCFWNI Trigger: GATATTCCAGAAGCAGGACAACACCAGTGTTGTCTT...CTTCTGAACTTTAGTTTCCTTTAAGTACACCAGGGTTGGCCAGACAGCTCGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS-3UTR CAA 90 bp | TCTGCATGTATGCATGTGTACCACATATGCAAAGTACCCAAAGAGACCAGAAGAAAAGAGGTTCAGTCTTaGGAGAAACTCAGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SACMHVYHICKVPKETRRKEVQS*EKLSVL Trigger: CAGGACACTGAGTTTCTCCAAAGACTGAACCTCTTT...TCTTCTGGTCTCTTTGGGTACTTTGCATATGTGGTACACATGCATACATGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 72 bp | GACGTGCAGGGTGGGGTGGCTGGAGACACTCCCTCATaGTTAAGGGCTCGGAACATCCCTGCGACCGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DVQGGVAGDTPS*LRARNIPATVC Trigger: GCAGACGGTCGCAGGGATGTTCCGAGCCCTTAAGCATGAGGGAGTGTCTCCAGCCACCCCACCCTGCACGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 72 bp | CACAGAACGTTGCCGAGGTTGGCACCAGCCATGACCTaGTCCAGGCGTACCTGGTCAGCAATGTTCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRTLPRLAPAMT*SRRTWSAMFRG Trigger: CCCCCGGAACATTGCTGACCAGGTACGCCTGGAGCAGGTCATGGCTGGTGCCAACCTCGGCAACGTTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CAA 72 bp | AGCTCCTGTAGCCTGCACCACAGAACGTTGCCGAGGTaGGCACCAGCCATGACCTGCTCCAGGCGTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCSLHHRTLPR*APAMTCSRRTW Trigger: CCAGGTACGCCTGGAGCAGGTCATGGCTGGTGCCAACCTCGGCAACGTTCTGTGGTGCAGGCTACAGGAGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS TCA 72 bp | TGCACCACAGAACGTTGCCGAGGTTGGCACCAGCCATaGCCTGCTCCAGGCGTACCTGGTCAGCAATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTTERCRGWHQP*PAPGVPGQQCS Trigger: GGAACATTGCTGACCAGGTACGCCTGGAGCAGGTCATGGCTGGTGCCAACCTCGGCAACGTTCTGTGGTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 72 bp | CCCACACTGATGGAAGGGTTGTCTGCCTGTACTATGTaGATGAGGTCCAGGGCAGGGCCACGGAGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PTLMEGLSACTM*MRSRAGPRRLS Trigger: AGAGAGCCTCCGTGGCCCTGCCCTGGACCTCATGCACATAGTACAGGCAGACAACCCTTCCATCAGTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CAA 90 bp | ACCTGCTTAAAGGCCTCCAGACATTCCCCCACACTGATGGAAGGGTaGTCTGCCTGTACTATGTGCATGAGGTCCAGGGCAGGGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: TCLKASRHSPTLMEG*SACTMCMRSRAGPR Trigger: CCGTGGCCCTGCCCTGGACCTCATGCACATAGTACAGGCAGACAACCCTTCCATCAGTGTGGGGGAATGTCTGGAGGCCTTTAAGCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS TCA 72 bp | CAACCACCAGCAGTGACTTCTGGACGTCTACACCCATaGTCTTACACCACTCCTCCAGCAGGGCCACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPPAVTSGRLHP*SYTTPPAGPPP Trigger: TGGCGGTGGCCCTGCTGGAGGAGTGGTGTAAGATCATGGGTGTAGACGTCCAGAAGTCACTGCTGGTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 72 bp | CTCCAGACATTCCCCCACACTGATGGAAGGGTTGTCTaGCTGTACTATGTGCATGAGGTCCAGGGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQTFPHTDGRVV*LYYVHEVQGRA Trigger: GGCCCTGCCCTGGACCTCATGCACATAGTACAGGCAGACAACCCTTCCATCAGTGTGGGGGAATGTCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CAA 72 bp | ACTTCACAGGCAACAGAGGCCTCTGGCCGTGAACCATaGCCTGCCCCGTCAAATGGGCCAATAACTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSQATEASGREP*PAPSNGPITQG Trigger: CCCCTGAGTTATTGGCCCATTTGACGGGGCAGGCAATGGTTCACGGCCAGAGGCCTCTGTTGCCTGTGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CCA 72 bp | CTGCCGACACACTTCAGAGCCTCCTGGAGGACTGTCTaGATCTCAGGTTCACCACAGTCCACCGGAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPTHFRASWRTV*ISGSPQSTGMS Trigger: TGACATTCCGGTGGACTGTGGTGAACCTGAGATCCAGACAGTCCTCCAGGAGGCTCTGAAGTGTGTCGGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS CCA 72 bp | CTGCTTCAGGGATGGGCCATTCCTTGGCTATCTCAGTaGCCTGTTCCAACCAGACCTCAAAGGGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQGWAIPWLSQ*PVPTRPQRAPP Trigger: AGGAGGAGCCCTTTGAGGTCTGGTTGGAACAGGCCACTGAGATAGCCAAGGAATGGCCCATCCCTGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS TCA 72 bp | ACCTTCATCAGCTGCAAAAAGGTGGGGAGTGGGCCCTaGTCTTTCAGCTCCTGTAGCCTGCACCACAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: TFISCKKVGSGP*SFSSCSLHHRT Trigger: CGTTCTGTGGTGCAGGCTACAGGAGCTGAAAGATCAGGGCCCACTCCCCACCTTTTTGCAGCTGATGAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
||
| CDS GCA 72 bp | TGTGAGGTTCTACGGCTCTCCGTGCTCCCAAACACCTaGTTAAAGGCCTCCAGACATTCCCCCACACTGATG | + |
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Preference number: 6 (lower is better) Translates to: CEVLRLSVLPNT*LKASRHSPTLM Trigger: CATCAGTGTGGGGGAATGTCTGGAGGCCTTTAAGCAGGTGTTTGGGAGCACGGAGAGCCGTAGAACCTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS CAA 72 bp | AAGGCCTCCAGACATTCCCCCACACTGATGGAAGGGTaGTCTGCCTGTACTATGTGCATGAGGTCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: KASRHSPTLMEG*SACTMCMRSRA Trigger: TGCCCTGGACCTCATGCACATAGTACAGGCAGACAACCCTTCCATCAGTGTGGGGGAATGTCTGGAGGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS CAA 90 bp | TCTGCCACCCACCTTTTCTTTTCTGCTTCAGGGATGGGCCATTCCTaGGCTATCTCAGTGGCCTGTTCCAACCAGACCTCAAAGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SATHLFFSASGMGHS*AISVACSNQTSKGS Trigger: GGAGCCCTTTGAGGTCTGGTTGGAACAGGCCACTGAGATAGCCAAGGAATGGCCCATCCCTGAAGCAGAAAAGAAAAGGTGGGTGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS TCA 72 bp | TTACAGTACTTCACAGGCAACAGAGGCCTCTGGCCGTaGACCATTGCCTGCCCCGTCAAATGGGCCAATAAC | + |
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Preference number: 6 (lower is better) Translates to: LQYFTGNRGLWP*TIACPVKWANN Trigger: GTTATTGGCCCATTTGACGGGGCAGGCAATGGTTCACGGCCAGAGGCCTCTGTTGCCTGTGAAGTACTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS CCA 72 bp | CTTCCTCACGTATCACCTTCATCAGCTGCAAAAAGGTaGGGAGTGGGCCCTGATCTTTCAGCTCCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPHVSPSSAAKR*GVGPDLSAPVA Trigger: GGCTACAGGAGCTGAAAGATCAGGGCCCACTCCCCACCTTTTTGCAGCTGATGAAGGTGATACGTGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS GCA 72 bp | CAACCAGACCTCAAAGGGCTCCTCCTCTGGGGCAGCTaGTGTGCTCCCAGAGAATATTCTCATCTTACAGTA | + |
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Preference number: 6 (lower is better) Translates to: QPDLKGLLLWGS*CAPREYSHLTV Trigger: TACTGTAAGATGAGAATATTCTCTGGGAGCACAGCAGCTGCCCCAGAGGAGGAGCCCTTTGAGGTCTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS CAA 72 bp | TTAGGGGTCTTGAAGATCACTTTCCAGACACCTCCCTaGCCCTGTACCTCACTGGGGACCACAGACATATCT | + |
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Preference number: 6 (lower is better) Translates to: LGVLKITFQTPP*PCTSLGTTDIS Trigger: AGATATGTCTGTGGTCCCCAGTGAGGTACAGGGCAAGGGAGGTGTCTGGAAAGTGATCTTCAAGACCCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS CAA 72 bp | GTGTCCTCCATAAGTTCCACTAAGACAACACTGGTGTaGTCCTGCTTCTGGAATATCTTGCCTAGTAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: VSSISSTKTTLV*SCFWNILPSSR Trigger: CCGGCTACTAGGCAAGATATTCCAGAAGCAGGACAACACCAGTGTTGTCTTAGTGGAACTTATGGAGGACAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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| CDS TCA 72 bp | AGAAAGAGGTTCAGTCTTTGGAGAAACTCAGTGTCCTaGTTAGGGGTCTTGAAGATCACTTTCCAGACACCT | + |
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Preference number: 6 (lower is better) Translates to: RKRFSLWRNSVS*LGVLKITFQTP Trigger: AGGTGTCTGGAAAGTGATCTTCAAGACCCCTAATCAGGACACTGAGTTTCTCCAAAGACTGAACCTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089236.11 ENSMUST00000122431.3 |
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