Pregenerated sensors for PNLDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073460Ensembl transcript IDs: ENSMUST00000163394.3, ENSMUST00000232982.2, ENSMUST00000233098.2, ENSMUST00000233189.2, ENSMUST00000233474.2, ENSMUST00000233548.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCACCATCTGCTGCAGGCCTCGCAAAGGGTCACTACATGGACCTaGCAAATGCTGGCCTTGACACCATCCCAGGGTCAGGAGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GHHLLQASQRVTTWT*QMLALTPSQGQESR Trigger: CCTGCTCTCCTGACCCTGGGATGGTGTCAAGGCCAGCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 90 bp | GCTTGGGGTCACCATCTGCTGCAGGCCTCGCAAAGGGTCACTACATaGACCTGGCAAATGCTGGCCTTGACACCATCCCAGGGTCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AWGHHLLQASQRVTT*TWQMLALTPSQGQE Trigger: CTCCTGACCCTGGGATGGTGTCAAGGCCAGCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 90 bp | CTATGCTGCAGACCCTGTCAACAGCGGCTTGACAACTCACAGCAGTaGCCAGAACCAGACCACATGGGACCCCAGCAGGCAGAGGCACTT | + |
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Preference number: 1 (lower is better) Translates to: LCCRPCQQRLDNSQQ*PEPDHMGPQQAEAL Trigger: AAGTGCCTCTGCCTGCTGGGGTCCCATGTGGTCTGGTTCTGGCCACTGCTGTGAGTTGTCAAGCCGCTGTTGACAGGGTCTGCAGCATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| 3UTR GCA 90 bp | CAGGTGATGTTGGGGGAATGTCTCCAGGACCGGTACAAGGAGACCTaGAGGGTTGGGTGGTTCCTGTACTCCTTCAAGACACTGCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QVMLGECLQDRYKET*RVGWFLYSFKTLRA Trigger: TGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACATTCCCCCAACATCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR TCA 90 bp | TTCCAAGAGGTTGGAGACCCGTGGGAAACGCAGTTCCTGCAATCATaGAGAACGGAGCACTGTGCTTGGGGTCACCATCTGCTGCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: FQEVGDPWETQFLQS*RTEHCAWGHHLLQA Trigger: GGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATGATTGCAGGAACTGCGTTTCCCACGGGTCTCCAACCTCTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR GCA 90 bp | CGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTaGTCTCAGGGCATGGGTCTTCCCAGGAGAAATGCAATCATGGCC | + |
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Preference number: 1 (lower is better) Translates to: RGPSPETKTEAEVAH*SQGMGLPRRNAIMA Trigger: GGCCATGATTGCATTTCTCCTGGGAAGACCCATGCCCTGAGAGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233098.2 ENSMUST00000233474.2 |
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| 3UTR CCA 90 bp | ACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTaGCTCACTGCTCTCAGGGCATGGGTCTTCCCAGGAGAAATGCAA | + |
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Preference number: 1 (lower is better) Translates to: TSHEGHLQRLRQKLR*LTALRAWVFPGEMQ Trigger: TTGCATTTCTCCTGGGAAGACCCATGCCCTGAGAGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233098.2 ENSMUST00000233474.2 |
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| 3UTR TCA 90 bp | AGGGCATGGGTCTTCCCAGGAGAAATGCAATCATGGCCCAGGTGGTaGCTATGCTGCAGACCCTGTCAACAGCGGCTTGACAACTCACAG | + |
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Preference number: 1 (lower is better) Translates to: RAWVFPGEMQSWPRW*LCCRPCQQRLDNSQ Trigger: CTGTGAGTTGTCAAGCCGCTGTTGACAGGGTCTGCAGCATAGTCACCACCTGGGCCATGATTGCATTTCTCCTGGGAAGACCCATGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| 3UTR GCA 90 bp | TGCAATCATGAAGAACGGAGCACTGTGCTTGGGGTCACCATCTGCTaGAGGCCTCGCAAAGGGTCACTACATGGACCTGGCAAATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CNHEERSTVLGVTIC*RPRKGSLHGPGKCW Trigger: CCAGCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATGATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR GCA 90 bp | TCCTGCAATCATGAAGAACGGAGCACTGTGCTTGGGGTCACCATCTaGTGCAGGCCTCGCAAAGGGTCACTACATGGACCTGGCAAATGC | + |
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Preference number: 1 (lower is better) Translates to: SCNHEERSTVLGVTI*CRPRKGSLHGPGKC Trigger: GCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATGATTGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 90 bp | GTTGGGGGAATGTCTCCAGGACCGGTACAAGGAGACCTGCAGGGTTaGGTGGTTCCTGTACTCCTTCAAGACACTGCGGGCATCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: VGGMSPGPVQGDLQG*VVPVLLQDTAGILK Trigger: TTTAAGGATGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACATTCCCCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR GCA 90 bp | TCGTACACTTCCAAGAGGTTGGAGACCCGTGGGAAACGCAGTTCCTaGAATCATGAAGAACGGAGCACTGTGCTTGGGGTCACCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: SYTSKRLETRGKRSS*NHEERSTVLGVTIC Trigger: GCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATGATTGCAGGAACTGCGTTTCCCACGGGTCTCCAACCTCTTGGAAGTGTACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 90 bp | GGGGAATGTCTCCAGGACCGGTACAAGGAGACCTGCAGGGTTGGGTaGTTCCTGTACTCCTTCAAGACACTGCGGGCATCCTTAAACTTA | + |
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Preference number: 1 (lower is better) Translates to: GECLQDRYKETCRVG*FLYSFKTLRASLNL Trigger: TAAGTTTAAGGATGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACATTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR CCA 90 bp | AAGACACTGCGGGCATCCTTAAACTTATTGGTCAGGAGCAGGAACTaGCTTCGAGTGAACCGCCTGACATCGAACTTGCAGAGATTCTGG | + |
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Preference number: 1 (lower is better) Translates to: KTLRASLNLLVRSRN*LRVNRLTSNLQRFW Trigger: CCAGAATCTCTGCAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCCCGCAGTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR CAA 90 bp | CAGGCCTCGCAAAGGGTCACTACATGGACCTGGCAAATGCTGGCCTaGACACCATCCCAGGGTCAGGAGAGCAGGACTCTGGGGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: QASQRVTTWTWQMLA*TPSQGQESRTLGAS Trigger: TGATGCCCCCAGAGTCCTGCTCTCCTGACCCTGGGATGGTGTCAAGGCCAGCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CAA 90 bp | GATAAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATaGGGGGAAGGCAGGCTCGTGCACAGCACCGTTGCCATGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: DKVHLVHVRRQHIKV*GEGRLVHSTVAMHP Trigger: AGGGTGCATGGCAACGGTGCTGTGCACGAGCCTGCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGAATGTCTCACGGAGCACTGTGCTTaGGGTCACCATCTGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VVTMLQTCNRQVMLGECLTEHCA*GHHLLQ Trigger: CTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGT...GAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCCAGGTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGCTCTGCAGGAGCAAGTaGGCCACTTTCAAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: MAQVVTMLQTCNRQVMLGLCRSK*ATFKRT Trigger: AGTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAG...CCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCACCTGGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR CAA 90 bp | TGGTTCCTGTACTCCTTCAAGACACTGCGGGCATCCTTAAACTTATaGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCG | + |
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Preference number: 2 (lower is better) Translates to: WFLYSFKTLRASLNL*VRSRNWLRVNRLTS Trigger: CGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCCCGCAGTGTCTTGAAGGAGTACAGGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR-3UTR GCA 90 bp | GGAATGTCTCCAGGACCGGTACAAGGAGACCTGCAGGGTTGGGTGGTTCCTGTAAGGACCGCAAGGGTCTaGATGAAAACAAACTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GMSPGPVQGDLQGWVVPVRTARV*MKTNWF Trigger: AAACCAGTTTGTTTTCATGCAGACCCTTGCGGTCCT...TACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAGTTACTGCTCAGCACCTTGGGGTCACCATCTaGTGCAGGCCTCGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VNNHRSRILSGIQVTAQHLGVTI*CRPRKG Trigger: CCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAG...GTGCTGAGCAGTAACTTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACAAGGAGACCTGCAGGGTTGGGTGGTTCCTGTACTCCTTCAAGACACTGCCGGAAGAACTTCTCATaGAGATGCAGTAGGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: GTRRPAGLGGSCTPSRHCRKNFS*RCSRSI Trigger: GATGGACCTACTGCATCTCCATGAGAAGTTCTTCCG...GCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233548.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGGAAGGCCTCTGCAGGAGCAAGTaGGCCACTTTCAAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: KVHLVHVRRQHIKVLGEGLCRSK*ATFKRT Trigger: AGTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAG...GCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACGGGAAACGCAGTTCCTaGAATCATGAAGAACGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NLLVRSRNWLRVNRLTSNGKRSS*NHEERS Trigger: GCTCCGTTCTTCATGATTGCAGGAACTGCGTTTCCC...GTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGAATGTCTCCCGCAAGGGTCTGCATaGAAACAAACTGGTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: VVTMLQTCNRQVMLGECLPQGSA*KQTGLY Trigger: GTATAAACCAGTTTGTTTTCATGCAGACCCTTGCGG...GAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACCTCTGCAGGAGCAAGTaGGCCACTTTCAAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: NLLVRSRNWLRVNRLTSNLCRSK*ATFKRT Trigger: AGTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAG...GTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTGCAGAGATTCAACTTCTCATGGAGATaGAGTAGGTCCATCATCATG | + |
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Preference number: 2 (lower is better) Translates to: RSRNWLRVNRLTSNLQRFNFSWR*SRSIIM Trigger: CATGATGATGGACCTACTGCATCTCCATGAGAAGTT...GAATCTCTGCAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233548.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCACAGCACCGTTGCCATGCACCCTCTGCAGGAGCAAGTGAGCCACTTTCAATGCATGAAAACAAACTaGTTTATACAAACGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VHSTVAMHPLQEQVSHFQCMKTN*FIQTSH Trigger: GTGGCTCGTTTGTATAAACCAGTTTGTTTTCATGCA...TTGAAAGTGGCTCACTTGCTCCTGCAGAGGGTGCATGGCAACGGTGCTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGACAACTCACAGCAGTaGCCAGAACCAGACCACATG | + |
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Preference number: 2 (lower is better) Translates to: AIFTESHIYNTTDYVQRTDNSQQ*PEPDHM Trigger: CATGTGGTCTGGTTCTGGCCACTGCTGTGAGTTGTC...GGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| 3UTR GCA 72 bp | GGTATTGGGGGAAGGCAGGCTCGTGCACAGCACCGTTaGCATGCACCCTCTGCAGGAGCAAGTGAGCCACTT | + |
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Preference number: 3 (lower is better) Translates to: GIGGRQARAQHR*HAPSAGASEPL Trigger: AAGTGGCTCACTTGCTCCTGCAGAGGGTGCATGGCAACGGTGCTGTGCACGAGCCTGCCTTCCCCCAATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR GCA 72 bp | GAAGAACGGAGCACTGTGCTTGGGGTCACCATCTGCTaGAGGCCTCGCAAAGGGTCACTACATGGACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: EERSTVLGVTIC*RPRKGSLHGPG Trigger: GCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 72 bp | CTGCTGCAGGCCTCGCAAAGGGTCACTACATGGACCTaGCAAATGCTGGCCTTGACACCATCCCAGGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LLQASQRVTTWT*QMLALTPSQGQ Trigger: CTGACCCTGGGATGGTGTCAAGGCCAGCATTTGCCAGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR CCA 72 bp | AGACCCTGTCAACAGCGGCTTGACAACTCACAGCAGTaGCCAGAACCAGACCACATGGGACCCCAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RPCQQRLDNSQQ*PEPDHMGPQQA Trigger: TGCCTGCTGGGGTCCCATGTGGTCTGGTTCTGGCCACTGCTGTGAGTTGTCAAGCCGCTGTTGACAGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| 3UTR CCA 72 bp | ATGTCTCCAGGACCGGTACAAGGAGACCTGCAGGGTTaGGTGGTTCCTGTACTCCTTCAAGACACTGCGGGC | + |
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Preference number: 3 (lower is better) Translates to: MSPGPVQGDLQG*VVPVLLQDTAG Trigger: GCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR GCA 72 bp | CATGAAGAACGGAGCACTGTGCTTGGGGTCACCATCTaGTGCAGGCCTCGCAAAGGGTCACTACATGGACCT | + |
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Preference number: 3 (lower is better) Translates to: HEERSTVLGVTI*CRPRKGSLHGP Trigger: AGGTCCATGTAGTGACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR TCA 72 bp | GTTGGAGACCCGTGGGAAACGCAGTTCCTGCAATCATaGAGAACGGAGCACTGTGCTTGGGGTCACCATCTG | + |
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Preference number: 3 (lower is better) Translates to: VGDPWETQFLQS*RTEHCAWGHHL Trigger: CAGATGGTGACCCCAAGCACAGTGCTCCGTTCTTCATGATTGCAGGAACTGCGTTTCCCACGGGTCTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR TCA 72 bp | GTGGTGACTATGCTGCAGACCCTGTCAACAGCGGCTTaGCAACTCACAGCAGTGGCCAGAACCAGACCACAT | + |
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Preference number: 3 (lower is better) Translates to: VVTMLQTLSTAA*QLTAVARTRPH Trigger: ATGTGGTCTGGTTCTGGCCACTGCTGTGAGTTGTCAAGCCGCTGTTGACAGGGTCTGCAGCATAGTCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| 3UTR GCA 72 bp | TTGGGGGAATGTCTCCAGGACCGGTACAAGGAGACCTaGAGGGTTGGGTGGTTCCTGTACTCCTTCAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LGECLQDRYKET*RVGWFLYSFKT Trigger: TGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACATTCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGATAAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGAACGGAGCACTGTGCTaGGGGTCACCATCTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SDKVHLVHVRRQHIKVLGNGALC*GSPSAA Trigger: TGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTT...CCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR TCA 72 bp | ACAGCACCGTTGCCATGCACCCTCTGCAGGAGCAAGTaGGCCACTTTCAAAAGAACTGACCCGCAGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: TAPLPCTLCRSK*ATFKRTDPQRK Trigger: TTTCCTCTGCGGGTCAGTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAGGGTGCATGGCAACGGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR GCA 72 bp | TCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTaGTCTCAGGGCATGGGTCTTCCCAGGAGAAATGCA | + |
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Preference number: 3 (lower is better) Translates to: SPETKTEAEVAH*SQGMGLPRRNA Trigger: TGCATTTCTCCTGGGAAGACCCATGCCCTGAGAGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233098.2 ENSMUST00000233474.2 |
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| 3UTR-3UTR CAA 90 bp | AGACAGAAGCTGAGGTGGCTCACTGCTCTCAGGGCATGGGTCTTCCCAGGAGAAGCATCCTTAAACTTATaGGTCAGGAGCAGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: RQKLRWLTALRAWVFPGEASLNL*VRSRNW Trigger: CCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGC...TTCTCCTGGGAAGACCCATGCCCTGAGAGCAGTGAGCCACCTCAGCTTCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| 3UTR-3UTR CAA 90 bp | CTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTTCGGATAAGGTTCACTaGGTTCACGTAAGGCGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LIGQEQELASSEPPDIELSDKVH*VHVRRQ Trigger: CTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGA...AAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| 3UTR CCA 72 bp | GTACAGAGGACCGCAAGGGTCTGCATGAAAACAAACTaGTTTATACAAACGAGCCACGAGGGCCATCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VQRTARVCMKTN*FIQTSHEGHLQ Trigger: CTGGAGATGGCCCTCGTGGCTCGTTTGTATAAACCAGTTTGTTTTCATGCAGACCCTTGCGGTCCTCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233098.2 ENSMUST00000233474.2 |
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| 3UTR GCA 72 bp | AACACAACAGACTATGTACAGAGGACCGCAAGGGTCTaGATGAAAACAAACTGGTTTATACAAACGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: NTTDYVQRTARV*MKTNWFIQTSH Trigger: GTGGCTCGTTTGTATAAACCAGTTTGTTTTCATGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233098.2 ENSMUST00000233474.2 |
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| 3UTR CAA 72 bp | CACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATaGGGGGAAGGCAGGCTCGTGCACAGCACCGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLVHVRRQHIKV*GEGRLVHSTVA Trigger: GGCAACGGTGCTGTGCACGAGCCTGCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGAATGTCTCCAGGACCGGATGTTGGGGAGGGCCTaGCTCAGCACCAGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: MLQTCNRQVMLGECLQDRMLGRA*LSTSWT Trigger: GGTCCAACTGGTGCTGAGGCAGGCCCTCCCCAACAT...CCGGTCCTGGAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTCCAGGACCGGTACAAGGAGACCTGCAGGGTTGGGTGGTTCCTGTACTCATGTTGGGGAGGGCCTaGCTCAGCACCAGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: MSPGPVQGDLQGWVVPVLMLGRA*LSTSWT Trigger: GGTCCAACTGGTGCTGAGGCAGGCCCTCCCCAACAT...GAGTACAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCGGTCCTGGAGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | CGGGCATCCTTAAACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCCCGCGACAAGCTCCTaGAGGAGTGGAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RASLNLLVRSRNWLRVNRPATSS*RSGRLC Trigger: GCAGAGCCTTCCACTCCTGCAGGAGCTTGTCGCGGG...GCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTCCAGGCAGAGTCATCTaGTCACCTTCCTCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHEGHLQRLRQKLRWLTAPGRVI*SPSSAR Trigger: CCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGG...AGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTGCAGAGAGCACTGTCCAGATGTTaGGGAGGGCCTGCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRSRNWLRVNRLTSNLQRALSRC*GGPASA Trigger: TGCTGAGGCAGGCCCTCCCCAACATCTGGACAGTGC...TCTCTGCAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | CAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCCCTGTAACAGGCAGGTaGTGTTGGGGGAATGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSHEGHLQRLRQKLRWLPVTGR*CWGNVS Trigger: GGAGACATTCCCCCAACATCACCTGCCTGTTACAGG...GAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
||
| CDS-3UTR GCA 90 bp | AGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTCTTGGAACCCAGCGATaGCAGGCAGAGTCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHEGHLQRLRQKLRWLTALGTQR*QAESSG Trigger: ACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAG...AGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCGTTGCCATGCACCCTCTGCAGGAGCAAGTGAGCCACTTTCAAAAGAACGCACTGTCCAGATGTTaGGGAGGGCCTGCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STVAMHPLQEQVSHFQKNALSRC*GGPASA Trigger: TGCTGAGGCAGGCCCTCCCCAACATCTGGACAGTGC...GTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAGGGTGCATGGCAACGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGGAGCACTGTGCTTGGGGTCACCATCTGCTGCAGGCCTCGCAAAGGGTCTTCCAACAGCTGACTTaGTCACAAGAGGCGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTEHCAWGHHLLQASQRVFQQLT*SQEACS Trigger: TGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAA...GACCCTTTGCGAGGCCTGCAGCAGATGGTGACCCCAAGCACAGTGCTCCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
||
| 3UTR CAA 72 bp | CAAAGGGTCACTACATGGACCTGGCAAATGCTGGCCTaGACACCATCCCAGGGTCAGGAGAGCAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVTTWTWQMLA*TPSQGQESRTL Trigger: CAGAGTCCTGCTCTCCTGACCCTGGGATGGTGTCAAGGCCAGCATTTGCCAGGTCCATGTAGTGACCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
||
| 3UTR CAA 72 bp | GGTGGTGACTATGCTGCAGACCCTGTCAACAGCGGCTaGACAACTCACAGCAGTGGCCAGAACCAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGDYAADPVNSG*TTHSSGQNQTT Trigger: TGTGGTCTGGTTCTGGCCACTGCTGTGAGTTGTCAAGCCGCTGTTGACAGGGTCTGCAGCATAGTCACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGCACCGTTGCCATGCACCCTCTGCAGGAGCAAGTGAGCCACTTTCAACCTACCAAGGGCTTCTaGGCTTTCACCAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSTVAMHPLQEQVSHFQPTKGF*AFTNIW Trigger: CCAGATGTTGGTGAAAGCCCAGAAGCCCTTGGTAGG...TTGAAAGTGGCTCACTTGCTCCTGCAGAGGGTGCATGGCAACGGTGCTGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
||
| 3UTR CAA 72 bp | GTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTaGGGGGAATGTCTCCAGGACCGGTACAAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VTMLQTCNRQVM*GECLQDRYKET Trigger: GGTCTCCTTGTACCGGTCCTGGAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | TCGGATAAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGCCAGGCAGAGTCATCTaGTCACCTTCCTCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKVHLVHVRRQHIKVLGPGRVI*SPSSAR Trigger: CCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGG...CCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | ACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTTGCCTCAGCACCAGTTaGACCTCAAAGGCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNEPRGPSPETKTEAEVACLSTS*TSKAWN Trigger: GTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCA...AGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGCACTGTCCAGATGTTaGGGAGGGCCTGCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYTNEPRGPSPETKTEAEALSRC*GGPASA Trigger: TGCTGAGGCAGGCCCTCCCCAACATCTGGACAGTGC...CTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGTATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCCTTAAACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTCTTGGAACCCAGCGATaGCAGGCAGAGTCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GILKLIGQEQELASSEPPLGTQR*QAESSG Trigger: ACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAG...AGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCTTCGAGTGAACCGCCTGACATCGAACTTGCAGAGATTCTGGAACTCACTTGGAACCCAGCGATaGCAGGCAGAGTCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NWLRVNRLTSNLQRFWNSLGTQR*QAESSG Trigger: ACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAG...TGAGTTCCAGAATCTCTGCAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCCCAGGTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGACAGAGAAGCCTCTTaGAGAGAGAAGAATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MAQVVTMLQTCNRQVMLGDREAS*REKNLF Trigger: GAACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTC...CCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCACCTGGGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | CCCGCAGAGGAAAGCGTCATAGGCTGCTTCGTGAGGGCACTTGGTCTCAGCGTAAACTTCTCATGGAGATaGAGTAGGTCCATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: PAEESVIGCFVRALGLSVNFSWR*SRSIIM Trigger: CATGATGATGGACCTACTGCATCTCCATGAGAAGTT...TACGCTGAGACCAAGTGCCCTCACGAAGCAGCCTATGACGCTTTCCTCTGCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCAGAGGAAAGCGTCATAGGCTGCTTCGTGAGGGCACTTGGTCTCAGACTCTCCTTCGATGCTaGAAAACATGGACAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTRRGKRHRLLREGTWSQTLLRC*KTWTIQ Trigger: TTGGATTGTCCATGTTTTCCAGCATCGAAGGAGAGT...CTGAGACCAAGTGCCCTCACGAAGCAGCCTATGACGCTTTCCTCTGCGGGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | TCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCATGAAATGTTGGGGAGGGCCTaGCTCAGCACCAGTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQHNRLCTEDRKGLHEMLGRA*LSTSWT Trigger: GGTCCAACTGGTGCTGAGGCAGGCCCTCCCCAACAT...TTCATGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTAACTTCTCATGGAGATaGAGTAGGTCCATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHEGHLQRLRQKLRWLTANFSWR*SRSIIM Trigger: CATGATGATGGACCTACTGCATCTCCATGAGAAGTT...AGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTAAGCTCCTGCAGGAGTaGAAGGCTCTGCTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIGQEQELASSEPPDIELKLLQE*KALLKF Trigger: GAATTTGAGCAGAGCCTTCCACTCCTGCAGGAGCTT...AAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCCTTAAACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTAAGCTCCTGCAGGAGTaGAAGGCTCTGCTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GILKLIGQEQELASSEPPKLLQE*KALLKF Trigger: GAATTTGAGCAGAGCCTTCCACTCCTGCAGGAGCTT...AGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGTGCCTCAGCACCAGTTaGACCTCAAAGGCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYTNEPRGPSPETKTEAECLSTS*TSKAWN Trigger: GTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCA...CTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGTATAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAGCGTCATAGGCTGCTTCGTGAGGGCACTTGGTCTCAGCGTATTTTTTGCCTCAGCACCAGTTaGACCTCAAAGGCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGKRHRLLREGTWSQRIFCLSTS*TSKAWN Trigger: GTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCA...AAAAATACGCTGAGACCAAGTGCCCTCACGAAGCAGCCTATGACGCTTTCCTCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| 3UTR CAA 72 bp | TACTCCTTCAAGACACTGCGGGCATCCTTAAACTTATaGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSFKTLRASLNL*VRSRNWLRVNR Trigger: GCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCCCGCAGTGTCTTGAAGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGGAAGGCTGCTACATACTTGTTTaGCTCTCCTTCGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVHLVHVRRQHIKVLGEGCYILV*LSFDAG Trigger: TCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCA...GCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | TCGGATAAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGCTGGAAAGAGAACTCTaGGTCCAGGATCCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKVHLVHVRRQHIKVLGLEREL*VQDPKC Trigger: ACATTTGGGATCCTGGACTCAGAGTTCTCTTTCCAG...CCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | GTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGGAAGGCAGGCTCGTGCACATGGGATTCCATTTTTaGGGAACTTGTTATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VHVRRQHIKVLGEGRLVHMGFHF*GTCYSR Trigger: TCGACTATAACAAGTTCCTCAAAAATGGAATCCCAT...GTGCACGAGCCTGCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | ACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCCTCTTAGGATACTGTaGTTGATTTTCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNEPRGPSPETKTEAEVAPLRIL*LIFFSC Trigger: GCAGGAGAAGAAAATCAAGCACAGTATCCTAAGAGG...AGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTTCACTTGGTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGGAAGGCGACAGAGAAGCCTCTTaGAGAGAGAAGAATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVHLVHVRRQHIKVLGEGDREAS*REKNLF Trigger: GAACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTC...GCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | GACGGTGAGGATGAGTACAGGAGGGCGGATGCTGGGGTAATCGGGACCAGAAAACAGATACCACTCAGATaGCAAGTCAAAAAGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGEDEYRRADAGVIGTRKQIPLR*QVKKTD Trigger: ATCAGTCTTTTTGACTTGCCATCTGAGTGGTATCTG...TTTTCTGGTCCCGATTACCCCAGCATCCGCCCTCCTGTACTCATCCTCACCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCCTTAAACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTTGCTACATACTTGTTTaGCTCTCCTTCGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GILKLIGQEQELASSEPPCYILV*LSFDAG Trigger: TCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCA...AGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | CATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCCCCGCGACAAGCTCCTaGAGGAGTGGAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIYRISHLQHNRLCTEDRPATSS*RSGRLC Trigger: GCAGAGCCTTCCACTCCTGCAGGAGCTTGTCGCGGG...GCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGCGGAAGAACTTCTCATaGAGATGCAGTAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VYTNEPRGPSPETKTEAERKNFS*RCSRSI Trigger: GATGGACCTACTGCATCTCCATGAGAAGTTCTTCCG...CTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGTATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| 3UTR CAA 72 bp | ATGAATTTTCGGAACCCCAGCTCGGATAAGGTTCACTaGGTTCACGTAAGGCGCCAGCACATCAAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: MNFRNPSSDKVH*VHVRRQHIKVL Trigger: CAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGAGCTGGGGTTCCGAAAATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCAGTTCCTTCCAACAGCTaGCTTGGTCACAAGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NLTFTTQQTMYRGPQGSAVPSNS*LGHKRR Trigger: ACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAAC...TGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGGACAGAGAAGCCTCTTaGAGAGAGAAGAATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIQTSHEGHLQRLRQKLRDREAS*REKNLF Trigger: GAACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTC...CCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTACTCTCCTTCGATGCTaGAAAACATGGACAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIGQEQELASSEPPDIELTLLRC*KTWTIQ Trigger: TTGGATTGTCCATGTTTTCCAGCATCGAAGGAGAGT...AAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CCA 90 bp | GTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAGTTACTGCTCAGCACTTCCAACAGCTGACTTaGTCACAAGAGGCGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNNHRSRILSGIQVTAQHFQQLT*SQEACS Trigger: TGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAA...GTGCTGAGCAGTAACTTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR TCA 90 bp | TTTACACTGTCTTGCGTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAGTTCCTTCCAACAGCTaGCTTGGTCACAAGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSCVNNHRSRILSGIQVPSNS*LGHKRR Trigger: ACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAAC...TTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCACGCAAGACAGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR GCA 90 bp | CATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGACCCGCGACAAGCTCCTaGAGGAGTGGAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQPYLQNLTFTTQQTMYRPATSS*RSGRLC Trigger: GCAGAGCCTTCCACTCCTGCAGGAGCTTGTCGCGGG...TCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR GCA 90 bp | GGTGAGGATGAGTACAGGAGGGCGGATGCTGGGGTAATCGGGACCAGAAAAATTTTGATTTTCTTCTCCTaGTCTTCATTCATGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEDEYRRADAGVIGTRKILIFFS*SSFMYG Trigger: CCCATACATGAATGAAGAGCAGGAGAAGAAAATCAA...AATTTTTCTGGTCCCGATTACCCCAGCATCCGCCCTCCTGTACTCATCCTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000233474.2 |
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| CDS-3UTR CCA 90 bp | AGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGAAGCTCCTGCAGGAGTaGAAGGCTCTGCTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RISHLQHNRLCTEDRKGLKLLQE*KALLKF Trigger: GAATTTGAGCAGAGCCTTCCACTCCTGCAGGAGCTT...CAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CCA 90 bp | CATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCCAGGAGGGCGGATGCTaGGGTAATCGGGACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIYRISHLQHNRLCTEDRQEGGC*GNRDQK Trigger: TTTCTGGTCCCGATTACCCCAGCATCCGCCCTCCTG...GCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
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| 3UTR CAA 72 bp | ATTAATTTTCGGAACCCCAGCTCGGATAAGGTTCACTaGGTTCACGTAAGGCGCCAGCACATCAAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: INFRNPSSDKVH*VHVRRQHIKVL Trigger: CAATACCTTGATGTGCTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGAGCTGGGGTTCCGAAAATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233189.2 ENSMUST00000233474.2 |
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| CDS-3UTR TCA 90 bp | TTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTGATGGGATTCCATTTTTaGGGAACTTGTTATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLVRSRNWLRVNRLTSNLMGFHF*GTCYSR Trigger: TCGACTATAACAAGTTCCTCAAAAATGGAATCCCAT...CAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR TCA 90 bp | TTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTTCCTTCCAACAGCTaGCTTGGTCACAAGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTESHIYNTTDYVQRTARVPSNS*LGHKRR Trigger: ACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAAC...CCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR GCA 90 bp | GTGGTTCCTGTACTCCTTCAAGACACTGCGGGCATCCTTAAACTTATTGGTCAGCCTCTTAGGATACTGTaGTTGATTTTCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVLLQDTAGILKLIGQPLRIL*LIFFSC Trigger: GCAGGAGAAGAAAATCAAGCACAGTATCCTAAGAGG...CTGACCAATAAGTTTAAGGATGCCCGCAGTGTCTTGAAGGAGTACAGGAACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR GCA 90 bp | ATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCACGGTACAAGGAGACCTaGAGGGTTGGGTGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFTESHIYNTTDYVQRTARYKET*RVGWFL Trigger: CAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCG...TGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233098.2 |
||
| CDS-3UTR GCA 90 bp | TTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTTCCCAGGAGAAATaGAATCATGGCCCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLTFTTQQTMYRGPQGSSQEK*NHGPGG Trigger: ACCACCTGGGCCATGATTGCATTTCTCCTGGGAAGA...CCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
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| CDS-3UTR TCA 90 bp | AGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGTGCTACATACTTGTTTaGCTCTCCTTCGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RISHLQHNRLCTEDRKGLCYILV*LSFDAG Trigger: TCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCA...CAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR GCA 90 bp | CATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGACGGTACAAGGAGACCTaGAGGGTTGGGTGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQPYLQNLTFTTQQTMYRRYKET*RVGWFL Trigger: CAGGAACCACCCAACCCTGCAGGTCTCCTTGTACCG...TCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233098.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGCCAGGCAGAGTCATCTaGTCACCTTCCTCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISHIYRISHLQHNRLCTEPGRVI*SPSSAR Trigger: CCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGG...CTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CCA 90 bp | ATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGCCTACCAAGGGCTTCTaGGCTTTCACCAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYRISHLQHNRLCTEDRKPTKGF*AFTNIW Trigger: CCAGATGTTGGTGAAAGCCCAGAAGCCCTTGGTAGG...CTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CCA 90 bp | CATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCTTCCAACAGCTGACTTaGTCACAAGAGGCGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYRISHLQHNRLCTEDRFQQLT*SQEACS Trigger: TGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAA...GCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR TCA 90 bp | GCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCCTGGAAAGAGAACTCTaGGTCCAGGATCCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AIFTESHIYNTTDYVQRTLEREL*VQDPKC Trigger: ACATTTGGGATCCTGGACTCAGAGTTCTCTTTCCAG...GGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR TCA 90 bp | ATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGACTGTAACAGGCAGGTaGTGTTGGGGGAATGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISHIYRISHLQHNRLCTETVTGR*CWGNVS Trigger: GGAGACATTCCCCCAACATCACCTGCCTGTTACAGT...CTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| CDS-3UTR CCA 90 bp | AATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCACAGATACCACTCAGATaGCAAGTCAAAAAGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLTFTTQQTMYRGPQGSAQIPLR*QVKKTD Trigger: ATCAGTCTTTTTGACTTGCCATCTGAGTGGTATCTG...TGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CCA 90 bp | GCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCCGGAAGAACTTCTCATaGAGATGCAGTAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AIFTESHIYNTTDYVQRTRKNFS*RCSRSI Trigger: GATGGACCTACTGCATCTCCATGAGAAGTTCTTCCG...GGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR TCA 90 bp | ATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGCTCTGCAGGAGCAAGTaGGCCACTTTCAAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISHIYRISHLQHNRLCTELCRSK*ATFKRT Trigger: AGTTCTTTTGAAAGTGGCTCACTTGCTCCTGCAGAG...CTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
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| CDS-3UTR CCA 90 bp | GCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCACTCTCCTTCGATGCTaGAAAACATGGACAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AIFTESHIYNTTDYVQRTTLLRC*KTWTIQ Trigger: TTGGATTGTCCATGTTTTCCAGCATCGAAGGAGAGT...GGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR TCA 90 bp | ATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGATGGGATTCCATTTTTaGGGAACTTGTTATAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IYRISHLQHNRLCTEDRKMGFHF*GTCYSR Trigger: TCGACTATAACAAGTTCCTCAAAAATGGAATCCCAT...CTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR GCA 90 bp | ATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGCCTCTTAGGATACTGTaGTTGATTTTCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISHIYRISHLQHNRLCTEPLRIL*LIFFSC Trigger: GCAGGAGAAGAAAATCAAGCACAGTATCCTAAGAGG...CTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR GCA 90 bp | TATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAATTGATTTTCTTCTCCTaGTCTTCATTCATGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLQNLTFTTQQTMYRGPQLIFFS*SSFMYG Trigger: CCCATACATGAATGAAGAGCAGGAGAAGAAAATCAA...TTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS GCA 90 bp | CCTGCCTCAGCACCAGTTGGACCTCAAAGGCTTGGAACCCAGCGATaGCAGGCAGAGTCATCTGGTCACCTTCCTCAGCCAGGTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PASAPVGPQRLGTQR*QAESSGHLPQPGPA Trigger: GGCTGGACCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS GCA 90 bp | AACTCTATATCCAGACCCACGAAGTCCGCACCCGCGACAAGCTCCTaGAGGAGTGGAAGGCTCTGCTCAAATTCGTCCGCGCCCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSISRPTKSAPATSS*RSGRLCSNSSAPTS Trigger: GGACGTGGGCGCGGACGAATTTGAGCAGAGCCTTCCACTCCTGCAGGAGCTTGTCGCGGGTGCGGACTTCGTGGGTCTGGATATAGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGATTCTGGAACTCACGGTAGACCTGCTGCTCGCTCACCCCAGGCCACCTTTGGACCTCAAAGGCTaGGAACCCAGCGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEILELTVDLLLAHPRPPLDLKG*EPSDAR Trigger: CCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAA...AGGTGGCCTGGGGTGAGCGAGCAGCAGGTCTACCGTGAGTTCCAGAATCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 90 bp | ATGTTGGGGAGGGCCTGCCTCAGCACCAGTTGGACCTCAAAGGCTTaGAACCCAGCGATGCCAGGCAGAGTCATCTGGTCACCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLGRACLSTSWTSKA*NPAMPGRVIWSPSS Trigger: TGAGGAAGGTGACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCAGGCCCTCCCCAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 90 bp | TGGACCTCAAAGGCTTGGAACCCAGCGATGCCAGGCAGAGTCATCTaGTCACCTTCCTCAGCCAGGTCCAGCCACTGGGTCACCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: WTSKAWNPAMPGRVI*SPSSARSSHWVTLS Trigger: TGATAAGGTGACCCAGTGGCTGGACCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | GTTCACGTAAGGCGCCAGCACATCAAGGTATTGGGGGAAGGCAGGCTCGTGCACCTTCCAACAGCTGACTaGGTCACAAGAGGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VHVRRQHIKVLGEGRLVHLPTAD*VTRGVL Trigger: GAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAG...GTGCACGAGCCTGCCTTCCCCCAATACCTTGATGTGCTGGCGCCTTACGTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | CGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTCTCAGAGGAGACCTGCAGGGTaGGGTGGTTCCTGTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPSPETKTEAEVAHCSQRRPAG*GGSCTP Trigger: AGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCT...CTGAGAGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233098.2 |
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| CDS-3UTR CAA 90 bp | CAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCCGCCTGACATCGAACTaGCAGAGATTCTGGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTSHEGHLQRLRQKLRWLRLTSN*QRFWNS Trigger: TGAGTTCCAGAATCTCTGCAAGTTCGATGTCAGGCG...GAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
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| CDS CCA 90 bp | AAGCCTCTTGCAGAGAGAAGAATCTGTTCCTTCCAACAGCTGACTTaGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTGTGGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPLAERRICSFQQLT*SQEACSRYQRCGWL Trigger: GAGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGCAAGAGGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | AGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTGTGCTACATACTTGTTaGACTCTCCTTCGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHEGHLQRLRQKLRWLTAVLHTC*TLLRCW Trigger: CCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCAC...AGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS TCA 90 bp | CAGAGAAGCCTCTTGCAGAGAGAAGAATCTGTTCCTTCCAACAGCTaGCTTGGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRSLLQREESVPSNS*LGHKRRAQGTSVVA Trigger: AGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGCAAGAGGCTTCTCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 90 bp | GCCAGGTCCAGCCACTGGGTCACCTTATCAATCACCACCTTGATTTaGTCTTTATCCAGAGAGCTTCGGACTCTCCAGTTCCCTCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSSHWVTLSITTLI*SLSRELRTLQFPLR Trigger: CCTAAGAGGGAACTGGAGAGTCCGAAGCTCTCTGGATAAAGACCAAATCAAGGTGGTGATTGATAAGGTGACCCAGTGGCTGGACCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 90 bp | CCAGGCAGAGTCATCTGGTCACCTTCCTCAGCCAGGTCCAGCCACTaGGTCACCTTATCAATCACCACCTTGATTTGGTCTTTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGRVIWSPSSARSSH*VTLSITTLIWSLSR Trigger: TCTGGATAAAGACCAAATCAAGGTGGTGATTGATAAGGTGACCCAGTGGCTGGACCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 90 bp | ATGATATTAACCCTGTTAGGAACAGCGATGCCAGGCAGAGTCATCTaGTCACCTTCCTCAGCCAGGTCCAGCCACTGGGTCACCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: MILTLLGTAMPGRVI*SPSSARSSHWVTLS Trigger: TGATAAGGTGACCCAGTGGCTGGACCTGGCTGAGGAAGGTGACCAGATGACTCTGCCTGGCATCGCTGTTCCTAACAGGGTTAATATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232982.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGTGGCTCACTGCTGAGTGTGCTACATACTaGTTTGACTCTCCTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SHEGHLQRLRQKLRWLTAECATY*FDSPSM Trigger: CATCGAAGGAGAGTCAAACAAGTATGTAGCACACTC...AGCAGTGAGCCACCTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGAATGTCTCCAGGACCGGGAGTGTGCTACATACTaGTTTGACTCTCCTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: MLQTCNRQVMLGECLQDRECATY*FDSPSM Trigger: CATCGAAGGAGAGTCAAACAAGTATGTAGCACACTC...CCGGTCCTGGAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACCTGCAGGGTTGGGTGGTTCCTGTACTCCTTCAAGACACTGCGGGCAGGGAAGAGAAAGAAATaGCAGGAGTGTGCTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: KETCRVGWFLYSFKTLRAGKRKK*QECATY Trigger: GTATGTAGCACACTCCTGCAATTTCTTTCTCTTCCC...TGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCCCAGGTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGGGAAGAGAAAGAAATaGCAGGAGTGTGCTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: MAQVVTMLQTCNRQVMLGGKRKK*QECATY Trigger: GTATGTAGCACACTCCTGCAATTTCTTTCTCTTCCC...CCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCACCTGGGCCAT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS GCA 90 bp | AGAAGAATCTGTTCCTTCCAACAGCTGACTTGGTCACAAGAGGCGTaGTCAAGGTACCAGCGTTGTGGCTGGCTCACCTTCTTCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: RRICSFQQLTWSQEA*SRYQRCGWLTFFTI Trigger: GATTGTGAAGAAGGTGAGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAACTTGCAGAGATTCGTGCTACATACTTGTTaGACTCTCCTTCGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRNWLRVNRLTSNLQRFVLHTC*TLLRCW Trigger: CCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCAC...GAATCTCTGCAAGTTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACCTGCAGGGTTGGGTGGTTCCTGTACTCCTTCAAGACACTGCGGGCACTTAGGATACTGTGCTaGATTTTCTTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KETCRVGWFLYSFKTLRALRILC*IFFSCS Trigger: AGAGCAGGAGAAGAAAATCAAGCACAGTATCCTAAG...TGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 90 bp | AGATGGCAAGTCAAAAAGACTGATCTGTTGGGGCCGAGACAAGTTTaGACGCAGACCTGTGAACTCTATATCCAGACCCACGAAGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RWQVKKTDLLGPRQV*TQTCELYIQTHEVR Trigger: GCGGACTTCGTGGGTCTGGATATAGAGTTCACAGGTCTGCGTTCAAACTTGTCTCGGCCCCAACAGATCAGTCTTTTTGACTTGCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | TCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCATGAATTGGACCTCAAAGGCTaGGAACCCAGCGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLQHNRLCTEDRKGLHELDLKG*EPSDAR Trigger: CCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAA...TTCATGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CAA 90 bp | GTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAGTTACTGCTCAGCACCTTCCAACAGCTGACTaGGTCACAAGAGGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNNHRSRILSGIQVTAQHLPTAD*VTRGVL Trigger: GAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAG...GTGCTGAGCAGTAACTTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTGACTATGCTGCAGACCTGTAACAGGCAGGTGATGTTGGGGGAATGTCTCAGACAGAGAAGCCTCTaGCAGAGAGAAGAATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VVTMLQTCNRQVMLGECLRQRSL*QREESV Trigger: AACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTCT...GAGACATTCCCCCAACATCACCTGCCTGTTACAGGTCTGCAGCATAGTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | TTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTTGGACCTCAAAGGCTaGGAACCCAGCGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQNLTFTTQQTMYRGPQGLDLKG*EPSDAR Trigger: CCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAA...CCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCATCTTCCAACAGCTGACTaGGTCACAAGAGGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISHLQHNRLCTEDRKGLHLPTAD*VTRGVL Trigger: GAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAG...ATGCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
||
| CDS-3UTR CAA 90 bp | CATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCTCGTGCACAGCACCGTaGCCATGCACCCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIYRISHLQHNRLCTEDRSCTAP*PCTLCR Trigger: CCTGCAGAGGGTGCATGGCAACGGTGCTGTGCACGA...GCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
||
| CDS-3UTR CAA 90 bp | GTTTATACAAACGAGCCACGAGGGCCATCTCCAGAGACTAAGACAGAAGCTGAGGCATCCTTAAACTTATaGGTCAGGAGCAGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VYTNEPRGPSPETKTEAEASLNL*VRSRNW Trigger: CCAGTTCCTGCTCCTGACCAATAAGTTTAAGGATGC...CTCAGCTTCTGTCTTAGTCTCTGGAGATGGCCCTCGTGGCTCGTTTGTATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
||
| CDS-3UTR CAA 90 bp | TTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGACCCCAGGCCACCTCTaGACGGTGAGGATGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FTESHIYNTTDYVQRTARTPGHL*TVRMST Trigger: TGTACTCATCCTCACCGTCAAGAGGTGGCCTGGGGT...CCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
||
| CDS-3UTR CAA 90 bp | GTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAGTTACTGCTCAGCACGTGCTACATACTTGTTaGACTCTCCTTCGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VNNHRSRILSGIQVTAQHVLHTC*TLLRCW Trigger: CCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCAC...GTGCTGAGCAGTAACTTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
||
| CDS-3UTR CAA 90 bp | TATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAAGGAGACCTGCAGGGTaGGGTGGTTCCTGTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLQNLTFTTQQTMYRGPQRRPAG*GGSCTP Trigger: AGGAGTACAGGAACCACCCAACCCTGCAGGTCTCCT...TTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233098.2 |
||
| CDS GCA 90 bp | TTATCCAGAGAGCTTCGGACTCTCCAGTTCCCTCTTAGGATACTGTaGTTGATTTTCTTCTCCTGCTCTTCATTCATGTATGGGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRELRTLQFPLRIL*LIFFSCSSFMYGIP Trigger: TGGAATCCCATACATGAATGAAGAGCAGGAGAAGAAAATCAAGCACAGTATCCTAAGAGGGAACTGGAGAGTCCGAAGCTCTCTGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | AAACTTATTGGTCAGGAGCAGGAACTGGCTTCGAGTGAACCGCCTGACATCGAATTATCAATCACCACCTaGATTTGGTCTTTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLIGQEQELASSEPPDIELSITT*IWSLSR Trigger: TCTGGATAAAGACCAAATCAAGGTGGTGATTGATAA...TTCGATGTCAGGCGGTTCACTCGAAGCCAGTTCCTGCTCCTGACCAATAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGCGTCATAGGCTGCTTCGTGAGGGCACTTGGTCTCAGCGTATTTTTTTATCAATCACCACCTaGATTTGGTCTTTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGKRHRLLREGTWSQRIFLSITT*IWSLSR Trigger: TCTGGATAAAGACCAAATCAAGGTGGTGATTGATAA...AAAAATACGCTGAGACCAAGTGCCCTCACGAAGCAGCCTATGACGCTTTCCTCT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | TTTACACTGTCTTGCGTGAATAATCACCGGTCCAGAATCCTTAGTGGGATTCAAAGACAGAGAAGCCTCTaGCAGAGAGAAGAATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSCVNNHRSRILSGIQRQRSL*QREESV Trigger: AACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTCT...TTGAATCCCACTAAGGATTCTGGACCGGTGATTATTCACGCAAGACAGTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 90 bp | ATACTGATTCAGAAACTGCACACTAGATGCCTGGAAAGAGAACTCTaGGTCCAGGATCCCAAATGTTGTAGGGAAGAGAAAGAAATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILIQKLHTRCLEREL*VQDPKCCREEKEIA Trigger: TGCAATTTCTTTCTCTTCCCTACAACATTTGGGATCCTGGACTCAGAGTTCTCTTTCCAGGCATCTAGTGTGCAGTTTCTGAATCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS-3UTR CAA 90 bp | TTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGCTTAGGATACTGTGCTaGATTTTCTTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQNLTFTTQQTMYRGPQGLRILC*IFFSCS Trigger: AGAGCAGGAGAAGAAAATCAAGCACAGTATCCTAAG...CCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CAA 90 bp | GAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGTCTGCTTATCAATCACCACCTaGATTTGGTCTTTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESHIYNTTDYVQRTARVCLSITT*IWSLSR Trigger: TCTGGATAAAGACCAAATCAAGGTGGTGATTGATAA...GCAGACCCTTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CAA 90 bp | ATCAGCCATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGTCGGATAAGGTTCACTaGGTTCACGTAAGGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISHIYRISHLQHNRLCTESDKVH*VHVRRQ Trigger: CTGGCGCCTTACGTGAACCAAGTGAACCTTATCCGA...CTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATGGCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163394.3 |
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| CDS-3UTR CAA 90 bp | TATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAGGGAAGAGAAAGAAATaGCAGGAGTGTGCTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: YLQNLTFTTQQTMYRGPQGKRKK*QECATY Trigger: GTATGTAGCACACTCCTGCAATTTCTTTCTCTTCCC...TTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CAA 90 bp | CATATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCCTTAGGATACTGTGCTaGATTTTCTTCTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HIYRISHLQHNRLCTEDRLRILC*IFFSCS Trigger: AGAGCAGGAGAAGAAAATCAAGCACAGTATCCTAAG...GCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS-3UTR CAA 90 bp | TATTTACAGAATCTCACATTTACAACACAACAGACTATGTACAGAGGACCGCAAAGACAGAGAAGCCTCTaGCAGAGAGAAGAATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YLQNLTFTTQQTMYRGPQRQRSL*QREESV Trigger: AACAGATTCTTCTCTCTGCAAGAGGCTTCTCTGTCT...TTGCGGTCCTCTGTACATAGTCTGTTGTGTTGTAAATGTGAGATTCTGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 |
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| CDS GCA 72 bp | TCCAGACCCACGAAGTCCGCACCCGCGACAAGCTCCTaGAGGAGTGGAAGGCTCTGCTCAAATTCGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRPTKSAPATSS*RSGRLCSNSSA Trigger: CGCGGACGAATTTGAGCAGAGCCTTCCACTCCTGCAGGAGCTTGTCGCGGGTGCGGACTTCGTGGGTCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 72 bp | GAGGGCCTGCCTCAGCACCAGTTGGACCTCAAAGGCTaGGAACCCAGCGATGCCAGGCAGAGTCATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EGLPQHQLDLKG*EPSDARQSHLV Trigger: GACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCAGGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 90 bp | GATGTTGGGGAGGGCCTGCCTCAGCACCAGTTGGACCTCAAAGGCTaGGAACCCAGCGATGCCAGGCAGAGTCATCTGGTCACCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DVGEGLPQHQLDLKG*EPSDARQSHLVTFL Trigger: GAGGAAGGTGACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCAGGCCCTCCCCAACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | AGGGCCTGCCTCAGCACCAGTTGGACCTCAAAGGCTTaGAACCCAGCGATGCCAGGCAGAGTCATCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RACLSTSWTSKA*NPAMPGRVIWS Trigger: TGACCAGATGACTCTGCCTGGCATCGCTGGGTTCCAAGCCTTTGAGGTCCAACTGGTGCTGAGGCAGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS GCA 72 bp | TGTTCCTTCCAACAGCTGACTTGGTCACAAGAGGCGTaGTCAAGGTACCAGCGTTGTGGCTGGCTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSFQQLTWSQEA*SRYQRCGWLTF Trigger: GAAGGTGAGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | TTGGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTGTaGCTGGCTCACCTTCTTCACAATCACCCACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVTRGVLKVPAL*LAHLLHNHPLL Trigger: GAGGAGTGGGTGATTGTGAAGAAGGTGAGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | TCACAAGAGGCGTGCTCAAGGTACCAGCGTTGTGGCTaGCTCACCTTCTTCACAATCACCCACTCCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQEACSRYQRCG*LTFFTITHSSF Trigger: GAAAGAGGAGTGGGTGATTGTGAAGAAGGTGAGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 90 bp | GAAGCCTCTTGCAGAGAGAAGAATCTGTTCCTTCCAACAGCTGACTaGGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTGTGGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EASCREKNLFLPTAD*VTRGVLKVPALWLA Trigger: AGCCAGCCACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGCAAGAGGCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 90 bp | TCCTCAGCCAGGTCCAGCCACTGGGTCACCTTATCAATCACCACCTaGATTTGGTCTTTATCCAGAGAGCTTCGGACTCTCCAGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSARSSHWVTLSITT*IWSLSRELRTLQFP Trigger: AGGGAACTGGAGAGTCCGAAGCTCTCTGGATAAAGACCAAATCAAGGTGGTGATTGATAAGGTGACCCAGTGGCTGGACCTGGCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 72 bp | CTCTTGCAGAGAGAAGAATCTGTTCCTTCCAACAGCTaGCTTGGTCACAAGAGGCGTGCTCAAGGTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLQREESVPSNS*LGHKRRAQGTS Trigger: GCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGCAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | CTGAACACTCTGCCGGGTCTTCAGATACCACTCAGATaGCAAGTCAAAAAGACTGATCTGTTGGGGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LNTLPGLQIPLR*QVKKTDLLGPR Trigger: TCTCGGCCCCAACAGATCAGTCTTTTTGACTTGCCATCTGAGTGGTATCTGAAGACCCGGCAGAGTGTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | GCAGAGAGAAGAATCTGTTCCTTCCAACAGCTGACTTaGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AERRICSFQQLT*SQEACSRYQRC Trigger: ACAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 72 bp | TGCAGAGAGAAGAATCTGTTCCTTCCAACAGCTGACTaGGTCACAAGAGGCGTGCTCAAGGTACCAGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CREKNLFLPTAD*VTRGVLKVPAL Trigger: CAACGCTGGTACCTTGAGCACGCCTCTTGTGACCAAGTCAGCTGTTGGAAGGAACAGATTCTTCTCTCTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163394.3 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 72 bp | AGGTCCAGCCACTGGGTCACCTTATCAATCACCACCTaGATTTGGTCTTTATCCAGAGAGCTTCGGACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSHWVTLSITT*IWSLSRELRTL Trigger: GAGAGTCCGAAGCTCTCTGGATAAAGACCAAATCAAGGTGGTGATTGATAAGGTGACCCAGTGGCTGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 72 bp | GTCAAAAAGACTGATCTGTTGGGGCCGAGACAAGTTTaGACGCAGACCTGTGAACTCTATATCCAGACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VKKTDLLGPRQV*TQTCELYIQTH Trigger: GTGGGTCTGGATATAGAGTTCACAGGTCTGCGTTCAAACTTGTCTCGGCCCCAACAGATCAGTCTTTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | TACCACTCAGATGGCAAGTCAAAAAGACTGATCTGTTaGGGCCGAGACAAGTTTGAACGCAGACCTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YHSDGKSKRLIC*GRDKFERRPVN Trigger: GTTCACAGGTCTGCGTTCAAACTTGTCTCGGCCCCAACAGATCAGTCTTTTTGACTTGCCATCTGAGTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CCA 72 bp | AGCCACTGGGTCACCTTATCAATCACCACCTTGATTTaGTCTTTATCCAGAGAGCTTCGGACTCTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHWVTLSITTLI*SLSRELRTLQF Trigger: GAACTGGAGAGTCCGAAGCTCTCTGGATAAAGACCAAATCAAGGTGGTGATTGATAAGGTGACCCAGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 72 bp | TCTTCAGATACCACTCAGATGGCAAGTCAAAAAGACTaGTCTGTTGGGGCCGAGACAAGTTTGAACGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSDTTQMASQKD*SVGAETSLNAD Trigger: GTCTGCGTTCAAACTTGTCTCGGCCCCAACAGATCAGTCTTTTTGACTTGCCATCTGAGTGGTATCTGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS TCA 72 bp | CAGAAACTGCACACTAGATGCCTGGAAAGAGAACTCTaGGTCCAGGATCCCAAATGTTGTAGGGAAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QKLHTRCLEREL*VQDPKCCREEK Trigger: TTTCTCTTCCCTACAACATTTGGGATCCTGGACTCAGAGTTCTCTTTCCAGGCATCTAGTGTGCAGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS GCA 72 bp | AGGAGTGTGCTACATACTTGTTTGACTCTCCTTCGATaGTGGAAAACATGGACAATCCAATCTGACAGATTG | + |
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Preference number: 6 (lower is better) Translates to: RSVLHTCLTLLR*WKTWTIQSDRL Trigger: CAATCTGTCAGATTGGATTGTCCATGTTTTCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCACACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 72 bp | AGAGAAAGAAATTGCAGGAGTGTGCTACATACTTGTTaGACTCTCCTTCGATGCTGGAAAACATGGACAATC | + |
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Preference number: 6 (lower is better) Translates to: RERNCRSVLHTC*TLLRCWKTWTI Trigger: GATTGTCCATGTTTTCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCACACTCCTGCAATTTCTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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| CDS CAA 90 bp | AATGTTGTAGGGAAGAGAAAGAAATTGCAGGAGTGTGCTACATACTaGTTTGACTCTCCTTCGATGCTGGAAAACATGGACAATCCAATC | + |
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Preference number: 6 (lower is better) Translates to: NVVGKRKKLQECATY*FDSPSMLENMDNPI Trigger: GATTGGATTGTCCATGTTTTCCAGCATCGAAGGAGAGTCAAACAAGTATGTAGCACACTCCTGCAATTTCTTTCTCTTCCCTACAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163394.3 ENSMUST00000232982.2 ENSMUST00000233474.2 ENSMUST00000233548.2 |
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