Pregenerated sensors for PNKD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026179Ensembl transcript IDs: ENSMUST00000027370.13, ENSMUST00000087225.6, ENSMUST00000087226.11, ENSMUST00000113805.8
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGTGGGGTCTCAGCCTCCCAGTGCTTCCTCCTCTAGGTCCCATTaGCTGGGCTCTGCCCTCCCTGGCCAGTCTGGAGGATTAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: CVGSQPPSASSSRSH*LGSALPGQSGGLVL Trigger: CAGCACTAATCCTCCAGACTGGCCAGGGAGGGCAGAGCCCAGGCAATGGGACCTAGAGGAGGAAGCACTGGGAGGCTGAGACCCCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | CACTCTCCCCTGGGAAGGCAGGCAGGCCCTTATGACCCGGGACAATaGCAGACCCAGAACAGATGTGCGTGGTGTGTGGCTCTGTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: HSPLGRQAGPYDPGQ*QTQNRCAWCVALCA Trigger: GGCACACAGAGCCACACACCACGCACATCTGTTCTGGGTCTGCCATTGTCCCGGGTCATAAGGGCCTGCCTGCCTTCCCAGGGGAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | GGCTGTGCCTGGAGAGGGCAGCCGAAGCCAAATGAGAGGGGAAACTaGGGCAGGGGCATCTCAGAGGAACAACAGAGGGCACTGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: GCAWRGQPKPNERGN*GRGISEEQQRALHS Trigger: GCTGTGCAGTGCCCTCTGTTGTTCCTCTGAGATGCCCCTGCCTCAGTTTCCCCTCTCATTTGGCTTCGGCTGCCCTCTCCAGGCACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | GTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTaGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VVWPLEQEPNAAFMI*RLVHEWGRGGRPSK Trigger: CTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | GTGGTGGTGGTGGTATTAGTGATGAAGAGGATGGTGAAGTGTGGGTaGTGGGTGGCCTCCCCTCTGCTGGGAGACCCTGGATTGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: VVVVVLVMKRMVKCG*WVASPLLGDPGLGW Trigger: CCACCCCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCACCCACCACCCACACTTCACCATCCTCTTCATCACTAATACCACCACCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | GGTGGTGGTGGTGGTGGTATTAGTGATGAAGAGGATGGTGAAGTGTaGGTGGTGGGTGGCCTCCCCTCTGCTGGGAGACCCTGGATTGGG | + |
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Preference number: 1 (lower is better) Translates to: GGGGGGISDEEDGEV*VVGGLPSAGRPWIG Trigger: CCCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCACCCACCACCCACACTTCACCATCCTCTTCATCACTAATACCACCACCACCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | ATCTGGAGGGGGATGAGCAGTGGGGTATGGCCAGGCCTGAGGTCCTaGAAGCTGCCACTCACTGGAGCTTCCTATTCCCAGACCTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: IWRGMSSGVWPGLRS*KLPLTGASYSQTSA Trigger: AGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGTGGCAGCTTCCAGGACCTCAGGCCTGGCCATACCCCACTGCTCATCCCCCTCCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | GGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCGATTGGTCCATaGGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GAGAKCSLHDLAIGP*VGEGRQTLQGSKVW Trigger: CCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | GTTTGCCAGGCAGAGGAGGCGGCAGGAGCGGGAAGGCATTCCAGCTaGAGAAACCGCATGAGCGAAAGGCACAAAGGCATGAAACTGCGA | + |
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Preference number: 1 (lower is better) Translates to: VCQAEEAAGAGRHSS*RNRMSERHKGMKLR Trigger: TCGCAGTTTCATGCCTTTGTGCCTTTCGCTCATGCGGTTTCTTCAGCTGGAATGCCTTCCCGCTCCTGCCGCCTCCTCTGCCTGGCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR GCA 90 bp | GTCCTGGAAGCTGCCACTCACTGGAGCTTCCTATTCCCAGACCTCTaGTATCTGCACACTGACAACAAGAGGGCCCTGGGATCCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: VLEAATHWSFLFPDL*YLHTDNKRALGSSG Trigger: CCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGTGGCAGCTTCCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR GCA 90 bp | GGGGAAACTGAGGCAGGGGCATCTCAGAGGAACAACAGAGGGCACTaGACAGCCCAGTGGAAGGCTCTGACACAGAAAGATGTGGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GETEAGASQRNNRGH*TAQWKALTQKDVAP Trigger: AGGAGCCACATCTTTCTGTGTCAGAGCCTTCCACTGGGCTGTGCAGTGCCCTCTGTTGTTCCTCTGAGATGCCCCTGCCTCAGTTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | CAGGAGCCAAATGCAGCCTTCATGATCTGGCGATTGGTCCATGAGTaGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: QEPNAAFMIWRLVHE*GRGGRPSKVAKSGD Trigger: GTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | GGTCAGGACTCTCTTCTCCTGGGTTCTAGGGCTCTAGTGGTGGTGTaGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCGA | + |
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Preference number: 1 (lower is better) Translates to: GQDSLLLGSRALVVV*PLEQEPNAAFMIWR Trigger: TCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAGGAGAAGAGAGTCCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | CACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTaGCAACAAGAGGGCCCTGGGATCCAGTGGGAAATGACGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: HSLELPIPRPLLSAH*QQEGPGIQWEMTWE Trigger: TTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | TTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTaGGGTCTCAGCCTCCCAGTGCTTCCTCCTCTAGGTCCCATTGCC | + |
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Preference number: 1 (lower is better) Translates to: FSCFLPLTLNTTCTV*GLSLPVLPPLGPIA Trigger: GGCAATGGGACCTAGAGGAGGAAGCACTGGGAGGCTGAGACCCCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR GCA 90 bp | GGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTaGTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGGGT | + |
|
Preference number: 1 (lower is better) Translates to: GRQTLQGSKVWRRFS*FLPLTLNTTCTVWG Trigger: ACCCCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR GCA 90 bp | ACAATGGCAGACCCAGAACAGATGTGCGTGGTGTGTGGCTCTGTGTaGCATCATCCTTTGACTCCCTGGCCTGAAGCAGAAGATTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: TMADPEQMCVVCGSV*HHPLTPWPEAEDSL Trigger: CAAGGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACACAGAGCCACACACCACGCACATCTGTTCTGGGTCTGCCATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | GACTCAGAGAGGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTaGGACAGCAGGCAGGCAGGAATTCCTAAGAACAAGGGCGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: DSERKGGEDRAREVK*DSRQAGIPKNKGGK Trigger: CTTTCCGCCCTTGTTCTTAGGAATTCCTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCCTCTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR TCA 90 bp | TATCTGCACACTGACAACAAGAGGGCCCTGGGATCCAGTGGGAAATaGCGTGGGAATGAAGGTTTTTGGCAAACTGCAAAGAGCCGGATG | + |
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Preference number: 1 (lower is better) Translates to: YLHTDNKRALGSSGK*RGNEGFWQTAKSRM Trigger: CATCCGGCTCTTTGCAGTTTGCCAAAAACCTTCATTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | GAACCAGGCTTCCAGTCCTTAGGTGTTCTTAGGAATGGCTCTGCCTaGCAATGTCTTAGCAAGGTAGGTAGGGTGGGACTTAGAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: EPGFQSLGVLRNGSA*QCLSKVGRVGLRVS Trigger: TGAGACTCTAAGTCCCACCCTACCTACCTTGCTAAGACATTGCCAGGCAGAGCCATTCCTAAGAACACCTAAGGACTGGAAGCCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CCA 90 bp | TATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGCCCTaGGATCCAGTGGGAAATGACGTGGGAATGAAGGTTTTTGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: YSQTSAICTLTTRGP*DPVGNDVGMKVFGK Trigger: TTTGCCAAAAACCTTCATTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCCTGGCGATTGGTCCATaGGTGGGGGAGGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGLAIGP*VGEGRQ Trigger: CTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAG...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CCACGGTGTGGAAGAGTTGGGTGCTGGCAGCAGCTTGGGCATCCTGCGCCCTCTGGGCCTCAGGAGCCATaGCCACACAAGACGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PRCGRVGCWQQLGHPAPSGPQEP*PHKTAV Trigger: GACTGCCGTCTTGTGTGGCCATGGCTCCTGAGGCCC...AGAGGGCGCAGGATGCCCAAGCTGCTGCCAGCACCCAACTCTTCCACACCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCTCTGCTGGGAGACCCTaGATTGGGGTGGGCGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSSAGRP*IGVGEG Trigger: ACCCTCGCCCACCCCAATCCAGGGTCTCCCAGCAGA...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCTGGCCTCCCCTCTGCTaGGAGACCCTGGATTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSWPPLC*ETLDWG Trigger: ACCCCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCA...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCGAGGATGGTGAAGTGTaGGTGGTGGGTGGCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSEDGEV*VVGGLP Trigger: GGGGAGGCCACCCACCACCCACACTTCACCATCCTC...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCCGATTGGTCCATGAGTaGGGGAGGGGAGGCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGRLVHE*GRGGRP Trigger: GGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCG...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCACTGGCGATTGGTCCATaGGTGGGGGAGGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGSRALVVVWPLEQEPNALAIGP*VGEGRQ Trigger: CTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAG...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCTCCTCTAGGTCCCATTaGCTGGGCTCTGCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSSSRSH*LGSALP Trigger: AGGGAGGGCAGAGCCCAGGCAATGGGACCTAGAGGA...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGTGGCCTCCCCTCTGCTaGGAGACCCTGGATTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: WPQRALDLRPEDKQIWRGWPPLC*ETLDWG Trigger: ACCCCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCA...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTAGTGTGGGTGGTGGGTaGCCTCCCCTCTGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVSVGGG*PPLCWE Trigger: CTCCCAGCAGAGGGGAGGCCACCCACCACCCACACT...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCGGGCTCTGCCCTCCCTaGCCAGTCTGGAGGATTAGT | + |
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Preference number: 2 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGGLCPP*PVWRIS Trigger: ACTAATCCTCCAGACTGGCCAGGGAGGGCAGAGCCC...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTCTAGGTCCCATTGCCTaGGCTCTGCCCTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVLGPIA*ALPSLA Trigger: GGCCAGGGAGGGCAGAGCCCAGGCAATGGGACCTAG...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGCTAGGTCCCATTGCCTaGGCTCTGCCCTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRLGPIA*ALPSLA Trigger: GGCCAGGGAGGGCAGAGCCCAGGCAATGGGACCTAG...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCCCACTGAGGCAGGGATaGGCCAGAACCAGGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGPLRQG*ARTRLP Trigger: TGGAAGCCTGGTTCTGGCCCATCCCTGCCTCAGTGG...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTGGCCTCCCCTCTGCTaGGAGACCCTGGATTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVWPPLC*ETLDWG Trigger: ACCCCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCA...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGTGAAGTGTGGGTGGTaGGTGGCCTCCCCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGSRALVVVWPLEQEPNAVKCGW*VASPLL Trigger: CAGCAGAGGGGAGGCCACCCACCACCCACACTTCAC...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGCGATTGGTCCATGAGTaGGGGAGGGGAGGCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRRLVHE*GRGGRP Trigger: GGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCG...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR CAA 90 bp | TGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCGATaGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: WPLEQEPNAAFMIWR*VHEWGRGGRPSKVA Trigger: TGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCTGGGAGACCCTGGATTaGGGTGGGCGAGGGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSWETLD*GGRGLL Trigger: TAATAACCCTCGCCCACCCCAATCCAGGGTCTCCCA...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCAGTGTGGGTGGTGGGTaGCCTCCCCTCTGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFSVGGG*PPLCWE Trigger: CTCCCAGCAGAGGGGAGGCCACCCACCACCCACACT...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGGTGAAGTGTGGGTGGTaGGTGGCCTCCCCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLVKCGW*VASPLL Trigger: CAGCAGAGGGGAGGCCACCCACCACCCACACTTCAC...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGCTCTGCCCTCCCTaGCCAGTCTGGAGGATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRGLCPP*PVWRIS Trigger: ACTAATCCTCCAGACTGGCCAGGGAGGGCAGAGCCC...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGCTCTAGTGGTGGTGTaGCCTCTGGAGCAGGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRALVVV*PLEQEP Trigger: TGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGC...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGTGTGCCATCATCCTTTaGCTCCCTGGCCTGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: WPQRALDLRPEDKQIWRGCAIIL*LPGLKQ Trigger: CTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACA...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | CTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGTCCTCTAGGTCCCATTaGCTGGGCTCTGCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVVVWPLEQEPNAAFMIWSSRSH*LGSALP Trigger: AGGGAGGGCAGAGCCCAGGCAATGGGACCTAGAGGA...CCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCTCTGCTGGGAGACCCTaGATTGGGGTGGGCGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFSAGRP*IGVGEG Trigger: ACCCTCGCCCACCCCAATCCAGGGTCTCCCAGCAGA...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGATGGTGAAGTGTGGGTaGTGGGTGGCCTCCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLMVKCG*WVASPL Trigger: CAGAGGGGAGGCCACCCACCACCCACACTTCACCAT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGAGGATGGTGAAGTGTaGGTGGTGGGTGGCCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFEDGEV*VVGGLP Trigger: GGGGAGGCCACCCACCACCCACACTTCACCATCCTC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTCTAGGTCCCATTGCCTaGGCTCTGCCCTCCCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSLGPIA*ALPSLA Trigger: GGCCAGGGAGGGCAGAGCCCAGGCAATGGGACCTAG...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGCAGAACAGATGTGCGTaGTGTGTGGCTCTGTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WPQRALDLRPEDKQIWRGQNRCA*CVALCA Trigger: GGCACACAGAGCCACACACCACGCACATCTGTTCTG...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGATGAGCAGTGGGGTATaGCCAGGCCTGAGGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLMSSGV*PGLRSW Trigger: CCAGGACCTCAGGCCTGGCCATACCCCACTGCTCAT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGTCCAAAGGCTGTGCCTaGAGAGGGCAGCCGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLSKGCA*RGQPKP Trigger: TGGCTTCGGCTGCCCTCTCCAGGCACAGCCTTTGGA...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGAGGCTAACAGGTGTTTaGCAGGCAGAGGAGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLRLTGV*QAEEAA Trigger: TGCCGCCTCCTCTGCCTGGCAAACACCTGTTAGCCT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTGTGAAGTGTGGGTGGTaGGTGGCCTCCCCTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSVKCGW*VASPLL Trigger: CAGCAGAGGGGAGGCCACCCACCACCCACACTTCAC...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGGAGGATGGTGAAGTGTaGGTGGTGGGTGGCCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GKGVKIEQERLSETAGRQEDGEV*VVGGLP Trigger: GGGGAGGCCACCCACCACCCACACTTCACCATCCTC...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGTGCTGGCAGCAGCATCCTGCGCCCTCTaGTGGGCCTCAGGAGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LYLHLAPSTVWKSWVLAAASCAL*WASGAM Trigger: CATGGCTCCTGAGGCCCACCAGAGGGCGCAGGATGC...TGCTGCCAGCACCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGGGGTGGCCTCCCCTCTaGTGGGAGACCCTGGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: THWSFLFPDLCYLHTDNKGWPPL*WETLDW Trigger: CCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCACCC...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGTGGGAGACCCTGGATTaGGGTGGGCGAGGGTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLWETLD*GGRGLL Trigger: TAATAACCCTCGCCCACCCCAATCCAGGGTCTCCCA...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGATGGTGAAGTGTGGGTaGTGGGTGGCCTCCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GKGVKIEQERLSETAGRQMVKCG*WVASPL Trigger: CAGAGGGGAGGCCACCCACCACCCACACTTCACCAT...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGCAGAACAGATGTGCGTaGTGTGTGGCTCTGTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLQNRCA*CVALCA Trigger: GGCACACAGAGCCACACACCACGCACATCTGTTCTG...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGACAACAAGAGGGCCCTaGGATCCAGTGGGAAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRTTRGP*DPVGND Trigger: GTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGT...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGTTTGACTCCCTGGCCTaGAGCAGAAGATTCCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLFDSLA*SRRFLG Trigger: GCCAAGGAATCTTCTGCTTCAGGCCAGGGAGTCAAA...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATGGGTGGCCTCCCCTCTaGTGGGAGACCCTGGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: QAGRKSAFNDSERKGGEDGWPPL*WETLDW Trigger: CCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCACCC...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGCATCCTTTGACTCCCTaGCCTGAAGCAGAAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRHPLTP*PEAEDS Trigger: GGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATG...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGCAGTTCACTCTCCCCTaGGAAGGCAGGCAGGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TGASYSQTSAICTLTTRGQFTLP*EGRQAL Trigger: AAGGGCCTGCCTGCCTTCCCAGGGGAGAGTGAACTG...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGACAACAAGAGGGCCCTaGGATCCAGTGGGAAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLTTRGP*DPVGND Trigger: GTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CAA 90 bp | CCAGAACAGATGTGCGTGGTGTGTGGCTCTGTGTGCCATCATCCTTaGACTCCCTGGCCTGAAGCAGAAGATTCCTTGGCAACCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PEQMCVVCGSVCHHP*TPWPEAEDSLATRN Trigger: GTTCCTGGTTGCCAAGGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACACAGAGCCACACACCACGCACATCTGTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGGAAATGACGTGGGAATaGAGGTTTTTGGCAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: WPQRALDLRPEDKQIWRGEMTWE*RFLANC Trigger: GCAGTTTGCCAAAAACCTTCATTCCCACGTCATTTC...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGTGGAGACGTTTCAGTTaGTTCCTTCCTCTTACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: WPQRALDLRPEDKQIWRGWRRFS*FLPLTL Trigger: TAGGGTAAGAGGAAGGAAGCAACTGAAACGTCTCCA...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTTGGGAGACCCTGGATTaGGGTGGGCGAGGGTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSWETLD*GGRGLL Trigger: TAATAACCCTCGCCCACCCCAATCCAGGGTCTCCCA...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGTGGTGGTGTGGCCTCTaGAGCAGGAGCCAAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TGASYSQTSAICTLTTRGWWCGL*SRSQMQ Trigger: CTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCA...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGAGGAATGGCTCTGCCTaGCAATGTCTTAGCAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LWPQRALDLRPEDKQIWRRNGSA*QCLSKV Trigger: TACCTTGCTAAGACATTGCCAGGCAGAGCCATTCCT...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGTATGACCCGGGACAATaGCAGACCCAGAACAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLYDPGQ*QTQNRC Trigger: ACATCTGTTCTGGGTCTGCCATTGTCCCGGGTCATA...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGACTGGCGATTGGTCCATaGGTGGGGGAGGGGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRLAIGP*VGEGRQ Trigger: CTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAG...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGCTTCAGGACATCCACTaGGGCAGGGATGGGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: THWSFLFPDLCYLHTDNKLQDIH*GRDGPE Trigger: TTCTGGCCCATCCCTGCCTCAGTGGATGTCCTGAAG...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGGGAGAAGCAGGTCTCTaGGGCAGACCACAGTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TGASYSQTSAICTLTTRGGEAGL*GRPQFT Trigger: AGTGAACTGTGGTCTGCCTCAGAGACCTGCTTCTCC...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGGGATCCAGTGGGAAATaGCGTGGGAATGAAGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLGSSGK*RGNEGF Trigger: AAAACCTTCATTCCCACGTCATTTCCCACTGGATCC...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGGGTGGCCTCCCCTCTaGTGGGAGACCCTGGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRGWPPL*WETLDW Trigger: CCAATCCAGGGTCTCCCAGCAGAGGGGAGGCCACCC...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AGACGTTTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGGGGCTCTGCCCTCCCTaGCCAGTCTGGAGGATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRFSCFLPLTLNTTCTVWGLCPP*PVWRIS Trigger: ACTAATCCTCCAGACTGGCCAGGGAGGGCAGAGCCC...CCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATCCACTGAGGCAGGGATaGGCCAGAACCAGGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QAGRKSAFNDSERKGGEDPLRQG*ARTRLP Trigger: TGGAAGCCTGGTTCTGGCCCATCCCTGCCTCAGTGG...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGGGGAATGAAGGTTTTTaGCAAACTGCAAAGAGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLGNEGF*QTAKSR Trigger: CCGGCTCTTTGCAGTTTGCCAAAAACCTTCATTCCC...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGTGTGCCATCATCCTTTaGCTCCCTGGCCTGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: THWSFLFPDLCYLHTDNKCAIIL*LPGLKQ Trigger: CTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACA...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGAGGAATGGCTCTGCCTaGCAATGTCTTAGCAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: GKGVKIEQERLSETAGRQRNGSA*QCLSKV Trigger: TACCTTGCTAAGACATTGCCAGGCAGAGCCATTCCT...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGACCAGGCCTGAGGTCCTaGAAGCTGCCACTCACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRPGLRS*KLPLTG Trigger: TCCAGTGAGTGGCAGCTTCCAGGACCTCAGGCCTGG...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAATGAGCAGTGGGGTATaGCCAGGCCTGAGGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRMSSGV*PGLRSW Trigger: CCAGGACCTCAGGCCTGGCCATACCCCACTGCTCAT...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGGGGAATGAAGGTTTTTaGCAAACTGCAAAGAGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: TGASYSQTSAICTLTTRGGNEGF*QTAKSR Trigger: CCGGCTCTTTGCAGTTTGCCAAAAACCTTCATTCCC...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCAGCCACAAAGGGCCCTTaGCCTGAGACCAGAGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: RQTCKQVKYGVIGATREAATKGP*PETRGQ Trigger: TTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGC...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCATGGTGGTGTGGCCTCTaGAGCAGGAGCCAAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RQTCKQVKYGVIGATREAWWCGL*SRSQMQ Trigger: CTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCA...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGGAAATGACGTGGGAATaGAGGTTTTTGGCAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: THWSFLFPDLCYLHTDNKEMTWE*RFLANC Trigger: GCAGTTTGCCAAAAACCTTCATTCCCACGTCATTTC...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCAAACAACAGAGGGCACTaGACAGCCCAGTGGAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RQTCKQVKYGVIGATREANNRGH*TAQWKA Trigger: AGCCTTCCACTGGGCTGTGCAGTGCCCTCTGTTGTT...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGACAGACCTCTGCTATCTaGACACTGACAACAAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRQTSAI*TLTTRG Trigger: CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTG...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGACGTTAGATCATTTTTaGGGTGAGCTTCCCCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: THWSFLFPDLCYLHTDNKTLDHF*GELPLQ Trigger: TTGTAGGGGAAGCTCACCCCAAAAATGATCTAACGT...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCAAGGAACCTCTCTCTCTaGCCTTCAGGACATCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RQTCKQVKYGVIGATREARNLSL*PSGHPL Trigger: CAGTGGATGTCCTGAAGGCCAGAGAGAGAGGTTCCT...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGACATCCTTTGACTCCCTaGCCTGAAGCAGAAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: KGRQTCKQVKYGVIGATRHPLTP*PEAEDS Trigger: GGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATG...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATACGTTAGATCATTTTTaGGGTGAGCTTCCCCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: QAGRKSAFNDSERKGGEDTLDHF*GELPLQ Trigger: TTGTAGGGGAAGCTCACCCCAAAAATGATCTAACGT...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCATATGACCCGGGACAATaGCAGACCCAGAACAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: RQTCKQVKYGVIGATREAYDPGQ*QTQNRC Trigger: ACATCTGTTCTGGGTCTGCCATTGTCCCGGGTCATA...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | TGGGTGCTGGCAGCAGCTTGGGCATCCTGCGCCCTCTaGTGGGCCTCAGGAGCCATGGCCACACAAGACGGC | + |
|
Preference number: 3 (lower is better) Translates to: WVLAAAWASCAL*WASGAMATQDG Trigger: GCCGTCTTGTGTGGCCATGGCTCCTGAGGCCCACCAGAGGGCGCAGGATGCCCAAGCTGCTGCCAGCACCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| 3UTR CCA 72 bp | AGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTaGAGGGGGATGAGCAGTGGGGTATGGCCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RALDLRPEDKQI*RGMSSGVWPGL Trigger: CAGGCCTGGCCATACCCCACTGCTCATCCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | CCAGGAACCTCTCTCTCTGGCCTTCAGGACATCCACTaGGGCAGGGATGGGCCAGAACCAGGCTTCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PGTSLSGLQDIH*GRDGPEPGFQS Trigger: GGACTGGAAGCCTGGTTCTGGCCCATCCCTGCCTCAGTGGATGTCCTGAAGGCCAGAGAGAGAGGTTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | CTGGGAAGGCAGGCAGGCCCTTATGACCCGGGACAATaGCAGACCCAGAACAGATGTGCGTGGTGTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGRQAGPYDPGQ*QTQNRCAWCVA Trigger: AGCCACACACCACGCACATCTGTTCTGGGTCTGCCATTGTCCCGGGTCATAAGGGCCTGCCTGCCTTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GGGATGAGCAGTGGGGTATGGCCAGGCCTGAGGTCCTaGAAGCTGCCACTCACTGGAGCTTCCTATTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GMSSGVWPGLRS*KLPLTGASYSQ Trigger: CTGGGAATAGGAAGCTCCAGTGAGTGGCAGCTTCCAGGACCTCAGGCCTGGCCATACCCCACTGCTCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCGTGTGCCATCATCCTTaGACTCCCTGGCCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGVCHHP*TPWPEA Trigger: TGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACAC...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | GCCAAATGCAGCCTTCATGATCTGGCGATTGGTCCATaGGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: AKCSLHDLAIGP*VGEGRQTLQGS Trigger: GCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | TGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATaGTCTGGCGATTGGTCCATGAGTGGGGGAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CGLWSRSQMQPS*SGDWSMSGGGE Trigger: CTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | CCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTaGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLEQEPNAAFMI*RLVHEWGRGGR Trigger: TCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGCTGGGAGACCCTGGATaGGGGTGGGCGAGGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLLGDPG*GWARVI Trigger: AATAACCCTCGCCCACCCCAATCCAGGGTCTCCCAG...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGTGTGCCATCATCCTTaGACTCCCTGGCCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LWPQRALDLRPEDKQIWRVCHHP*TPWPEA Trigger: TGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACAC...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GTGGTATTAGTGATGAAGAGGATGGTGAAGTGTGGGTaGTGGGTGGCCTCCCCTCTGCTGGGAGACCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVLVMKRMVKCG*WVASPLLGDPG Trigger: TCCAGGGTCTCCCAGCAGAGGGGAGGCCACCCACCACCCACACTTCACCATCCTCTTCATCACTAATACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GTAGGGTGGGACTTAGAGTCTCAGTCACCCAGAGTCTaGCTGCCCTGGTTGATGACCACTTTCCCAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VGWDLESQSPRV*LPWLMTTFPGT Trigger: GGTGCCTGGGAAAGTGGTCATCAACCAGGGCAGCCAGACTCTGGGTGACTGAGACTCTAAGTCCCACCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GCAGAAGATTCCTTGGCAACCAGGAACCTCTCTCTCTaGCCTTCAGGACATCCACTGAGGCAGGGATGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AEDSLATRNLSL*PSGHPLRQGWA Trigger: GGCCCATCCCTGCCTCAGTGGATGTCCTGAAGGCCAGAGAGAGAGGTTCCTGGTTGCCAAGGAATCTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | ATGGCCAGGCCTGAGGTCCTGGAAGCTGCCACTCACTaGAGCTTCCTATTCCCAGACCTCTGCTATCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MARPEVLEAATH*SFLFPDLCYLH Trigger: GTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGTGGCAGCTTCCAGGACCTCAGGCCTGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGCTGGGAGACCCTGGATaGGGGTGGGCGAGGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: GKGVKIEQERLSETAGRQLGDPG*GWARVI Trigger: AATAACCCTCGCCCACCCCAATCCAGGGTCTCCCAG...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | AATGCAGCCTTCATGATCTGGCGATTGGTCCATGAGTaGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NAAFMIWRLVHE*GRGGRPSKVAK Trigger: CTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | TCTCTTCTCCTGGGTTCTAGGGCTCTAGTGGTGGTGTaGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SLLLGSRALVVV*PLEQEPNAAFM Trigger: CATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAGGAGAAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GACAATGGCAGACCCAGAACAGATGTGCGTGGTGTGTaGCTCTGTGTGCCATCATCCTTTGACTCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DNGRPRTDVRGV*LCVPSSFDSLA Trigger: GGCCAGGGAGTCAAAGGATGATGGCACACAGAGCCACACACCACGCACATCTGTTCTGGGTCTGCCATTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | ACAACAGAGGGCACTGCACAGCCCAGTGGAAGGCTCTaGCACAGAAAGATGTGGCTCCTGGCTAACTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: TTEGTAQPSGRL*HRKMWLLANSP Trigger: AGGTGAGTTAGCCAGGAGCCACATCTTTCTGTGTCAGAGCCTTCCACTGGGCTGTGCAGTGCCCTCTGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR GCA 72 bp | GACCCAGAACAGATGTGCGTGGTGTGTGGCTCTGTGTaGCATCATCCTTTGACTCCCTGGCCTGAAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DPEQMCVVCGSV*HHPLTPWPEAE Trigger: TTCTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACACAGAGCCACACACCACGCACATCTGTTCTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | GGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTaGAGACGTTTCAGTTGCTTCCTTCCTCTTACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GEGRQTLQGSKV*RRFSCFLPLTL Trigger: TAGGGTAAGAGGAAGGAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGGAAGCAGAAGATTCCTaGGCAACCAGGAACCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLEAEDS*ATRNLS Trigger: AGAGAGGTTCCTGGTTGCCAAGGAATCTTCTGCTTC...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | GAGGGCCCTGGGATCCAGTGGGAAATGACGTGGGAATaGAGGTTTTTGGCAAACTGCAAAGAGCCGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGPGIQWEMTWE*RFLANCKEPDE Trigger: CTCATCCGGCTCTTTGCAGTTTGCCAAAAACCTTCATTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | GAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTaGCAACAAGAGGGCCCTGGGATCCAGTGGGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: ELPIPRPLLSAH*QQEGPGIQWEM Trigger: CATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | TTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTaGGGTCTCAGCCTCCCAGTGCTTCCTCCTCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FLPLTLNTTCTV*GLSLPVLPPLG Trigger: ACCTAGAGGAGGAAGCACTGGGAGGCTGAGACCCCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | AGACGTTTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGCTGGGAGACCCTGGATaGGGGTGGGCGAGGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: RRFSCFLPLTLNTTCTVWLGDPG*GWARVI Trigger: AATAACCCTCGCCCACCCCAATCCAGGGTCTCCCAG...CCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATGTCTGGCTGCCCTGGTaGATGACCACTTTCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGRKSAFNDSERKGGEDVWLPW*MTTFPG Trigger: GCCTGGGAAAGTGGTCATCAACCAGGGCAGCCAGAC...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR GCA 72 bp | AGATGTGGCTCCTGGCTAACTCACCTAAGGTGTGCTTaGAAAACGACCATAGTGCTCCTGTGGCCACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCGSWLTHLRCA*KTTIVLLWPQR Trigger: CCTTTGTGGCCACAGGAGCACTATGGTCGTTTTGCAAGCACACCTTAGGTGAGTTAGCCAGGAGCCACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | ACCTCTGCTATCTGCACACTGACAACAAGAGGGCCCTaGGATCCAGTGGGAAATGACGTGGGAATGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TSAICTLTTRGP*DPVGNDVGMKV Trigger: AACCTTCATTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | CCAGTGGAAGGCTCTGACACAGAAAGATGTGGCTCCTaGCTAACTCACCTAAGGTGTGCTTGCAAAACGACC | + |
|
Preference number: 3 (lower is better) Translates to: PVEGSDTERCGS*LTHLRCACKTT Trigger: GGTCGTTTTGCAAGCACACCTTAGGTGAGTTAGCCAGGAGCCACATCTTTCTGTGTCAGAGCCTTCCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATGTGTGCCATCATCCTTaGACTCCCTGGCCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QAGRKSAFNDSERKGGEDVCHHP*TPWPEA Trigger: TGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACAC...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | ACTGACAACAAGAGGGCCCTGGGATCCAGTGGGAAATaGCGTGGGAATGAAGGTTTTTGGCAAACTGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TDNKRALGSSGK*RGNEGFWQTAK Trigger: CTTTGCAGTTTGCCAAAAACCTTCATTCCCACGTCATTTCCCACTGGATCCCAGGGCCCTCTTGTTGTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CCA 72 bp | TTCCAGTCCTTAGGTGTTCTTAGGAATGGCTCTGCCTaGCAATGTCTTAGCAAGGTAGGTAGGGTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: FQSLGVLRNGSA*QCLSKVGRVGL Trigger: AAGTCCCACCCTACCTACCTTGCTAAGACATTGCCAGGCAGAGCCATTCCTAAGAACACCTAAGGACTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR TCA 72 bp | AGGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTaGGACAGCAGGCAGGCAGGAATTCCTAAGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RKGGEDRAREVK*DSRQAGIPKNK Trigger: CTTGTTCTTAGGAATTCCTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR GCA 72 bp | ACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTaGTTCCTTCCTCTTACCCTAAACACCACCTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: TLQGSKVWRRFS*FLPLTLNTTCT Trigger: AGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCGGGGTCCACAGCCACTaGCAGCCCAGCCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGGVHSH*QPSLGV Trigger: GACACCCAGGCTGGGCTGGCAGTGGCTGTGGACCCC...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCATCACTGGTGGGGCCTaGCCCTGGCCCCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGITGGA*PWPQSL Trigger: GAGGCTCTGGGGCCAGGGCCAGGCCCCACCAGTGAT...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGCTGGCTGCGCGTCATaGGGAGGCCGCGGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVAGCAS*GGRGNP Trigger: GGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTCACAGCCCTCGGGTCTaGGGGGTCCACAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVHSPRV*GVHSHC Trigger: GCAGTGGCTGTGGACCCCTCAGACCCGAGGGCTGTG...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGGGGTCCACAGCCACTaGCAGCCCAGCCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVGVHSH*QPSLGV Trigger: GACACCCAGGCTGGGCTGGCAGTGGCTGTGGACCCC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAAGCCGTCATCACTGGTaGGGCCTGGCCCTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNASRHHW*GLALAP Trigger: TGGGGCCAGGGCCAGGCCCCACCAGTGATGACGGCT...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGAGCCGTCATCACTGGTaGGGCCTGGCCCTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRALDLRPEDKQIWRSRHHW*GLALAP Trigger: TGGGGCCAGGGCCAGGCCCCACCAGTGATGACGGCT...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAAGCAGCCGTCATCACTaGTGGGGCCTGGCCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNASSRHH*WGLALA Trigger: GGCCAGGGCCAGGCCCCACCAGTGATGACGGCTGCT...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCCCCTGTGCCGCCGGCTaGGGTCACGGTTCCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFPCAAG*GHGSLH Trigger: GTGGAGGGAACCGTGACCTCAGCCGGCGGCACAGGG...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | GCCTTCATGATCTGGCGATTGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCCGACACAGGGGGTGGGTaGGGTAGGGGATACCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AFMIWRLVHEWGRGGRPSDTGGG*GRGYHP Trigger: AGGATGGTATCCCCTACCTCACCCACCCCCTGTGTC...GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGGGGTCCACAGCCACTaGCAGCCCAGCCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFGVHSH*QPSLGV Trigger: GACACCCAGGCTGGGCTGGCAGTGGCTGTGGACCCC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCGGCTCTGCAGTGCTCTaGTCCTGTTCTGGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGGSAVL*SCSGKP Trigger: AGGCTTCCCAGAACAGGACCAGAGCACTGCAGAGCC...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCGGAAGAGCAGCCGCTaGCTGCGCGTCATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWPLEQEPNAAFMIWRKSSR*LRVMRR Trigger: CCTCCTCATGACGCGCAGCCAGCGGCTGCTCTTCCG...CCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
||
| 3UTR CAA 72 bp | GAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCGATaGGTCCATGAGTGGGGGAGGGGAGGCAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQEPNAAFMIWR*VHEWGRGGRPS Trigger: GGAGGGTCTGCCTCCCCTCCCCCACTCATGGACCAATCGCCAGATCATGAAGGCTGCATTTGGCTCCTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTCACAGCCCTCGGGTCTaGGGGGTCCACAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSHSPRV*GVHSHC Trigger: GCAGTGGCTGTGGACCCCTCAGACCCGAGGGCTGTG...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGCCCTGTGCCGCCGGCTaGGGTCACGGTTCCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGPCAAG*GHGSLH Trigger: GTGGAGGGAACCGTGACCTCAGCCGGCGGCACAGGG...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGACACAGGGGGTGGGTaGGGTAGGGGATACCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVDTGGG*GRGYHP Trigger: AGGATGGTATCCCCTACCTCACCCACCCCCTGTGTC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGACACAGGGGGTGGGTaGGGTAGGGGATACCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNADTGGG*GRGYHP Trigger: AGGATGGTATCCCCTACCTCACCCACCCCCTGTGTC...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGCTAGGGCTCGAATCTaGAGTCGTCCCACGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVARARI*SRPTLT Trigger: GGTCAGCGTGGGACGACTTCAGATTCGAGCCCTAGC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGCTCGGGCTCCTCCTTaGATTCTGGTGAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVARAPP*ILVSCG Trigger: GCCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCACGGTTCCCTCCACTGTaGTCCCAGTGCTTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNARFPPL*SQCLWV Trigger: CACCCACAAGCACTGGGACCACAGTGGAGGGAACCG...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGCCAGTGAGCTCAGCATaGTCTCCGCTGTGCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WPQRALDLRPEDKQIWRGPVSSA*SPLCLR Trigger: TCGAAGGCACAGCGGAGACCATGCTGAGCTCACTGG...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | TATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGTGCTGGCAGCAGCTCACAGGGGAAGCCGATaGCCCAGGCTAGCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: YLHLAPSTVWKSWVLAAAHRGSR*PRLAPR Trigger: CCGTGGGGCTAGCCTGGGCCATCGGCTTCCCCTGTG...AGCTGCTGCCAGCACCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGGCTAGGGCTCGAATCTaGAGTCGTCCCACGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWPLEQEPNAAFMIWARARI*SRPTLT Trigger: GGTCAGCGTGGGACGACTTCAGATTCGAGCCCTAGC...CCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGGAAGAGCAGGTCCCCTaGGAAGAGGCAGGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLEEQVP*EEAGRT Trigger: GGTCCTTCCTGCCTCTTCTCAGGGGACCTGCTCTTC...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCTTTTGGAGTGGCCTTTaGGATAGCGATTCCGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGFWSGL*DSDSEP Trigger: GGGCTCGGAATCGCTATCCCAAAGGCCACTCCAAAA...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGGCGGGGCTGAGTTTTaGAGTGGCCTTTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVGGAEF*SGLWDS Trigger: GCTATCCCAAAGGCCACTCCAAAACTCAGCCCCGCC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCACCAGTGAGCTCAGCATaGTCTCCGCTGTGCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNAPVSSA*SPLCLR Trigger: TCGAAGGCACAGCGGAGACCATGCTGAGCTCACTGG...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTCTCTCCCAGGGTGGATaGGCATGTGCTCTTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVLSQGG*ACALAF Trigger: GAACGCAAGAGCACATGCCCATCCACCCTGGGAGAG...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGATCACTGGTGGGGCCTaGCCCTGGCCCCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGITGGA*PWPQSL Trigger: GAGGCTCTGGGGCCAGGGCCAGGCCCCACCAGTGAT...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGAAACCCCGCTGTTCTTaGCAGCTGCGGGGACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLKPRCS*QLRGLR Trigger: CCTGAGTCCCCGCAGCTGCCAAGAACAGCGGGGTTT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGCACAGGGGAAGCCGATaGCCCAGGCTAGCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGHRGSR*PRLAPR Trigger: CCGTGGGGCTAGCCTGGGCCATCGGCTTCCCCTGTG...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGTTGAAGAGGCGGGGCTaGGTTTTGGAGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRALDLRPEDKQIWRLKRRG*VLEWPL Trigger: CAAAGGCCACTCCAAAACTCAGCCCCGCCTCTTCAA...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATCCCTGTGCCGCCGGCTaGGGTCACGGTTCCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRKSAFNDSERKGGEDPCAAG*GHGSLH Trigger: GTGGAGGGAACCGTGACCTCAGCCGGCGGCACAGGG...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGCCCAGGTTCTCTTCTaGGTATTCATGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRALDLRPEDKQIWRAQVLF*VFMPRP Trigger: TGGCCTGGGCATGAATACGCAGAAGAGAACCTGGGC...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTGCCTCTGTACCCACTaGATCTTCCTCTCACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVCLCTH*IFLSRA Trigger: GGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCA...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | TGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGGGATGGGTTCTCAGGAATaGGTTGTAGGCGCGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPQRALDLRPEDKQIWRGMGSQE*VVGAFL Trigger: GAGGAACGCGCCTACAACCCATTCCTGAGAACCCAT...CCCCCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGGAAGTCGTCCCACGCTaGCCACATCTTGATGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRALDLRPEDKQIWREVVPR*PHLDDT Trigger: TGTGTCATCAAGATGTGGTCAGCGTGGGACGACTTC...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGCTGTGGCTCTGCAGTaGTCTGGTCCTGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFAVALQ*SGPVLG Trigger: TCCCAGAACAGGACCAGAGCACTGCAGAGCCACAGC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGGCCCAGGTTCTCTTCTaGGTATTCATGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWPLEQEPNAAFMIWAQVLF*VFMPRP Trigger: TGGCCTGGGCATGAATACGCAGAAGAGAACCTGGGC...CCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGCATTCTGGTGAGCTGTaGCTCTGCAGTGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLHSGEL*LCSALV Trigger: GACCAGAGCACTGCAGAGCCACAGCTCACCAGAATG...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCAGCCTTCATGATCTGGCATTCTGGTGAGCTGTaGCTCTGCAGTGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVVWPLEQEPNAAFMIWHSGEL*LCSALV Trigger: GACCAGAGCACTGCAGAGCCACAGCTCACCAGAATG...CCAGATCATGAAGGCTGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCATTTTGGAGTGGCCTTTaGGATAGCGATTCCGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSRALVVVWPLEQEPNAFWSGL*DSDSEP Trigger: GGGCTCGGAATCGCTATCCCAAAGGCCACTCCAAAA...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGCGGTTCCCTCCACTGTaGTCCCAGTGCTTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGVKIEQERLSETAGRQRFPPL*SQCLWV Trigger: CACCCACAAGCACTGGGACCACAGTGGAGGGAACCG...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGAGTGTGGCCAGGGGTaGCTAGGGCTCGAATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFECGQG*LGLESE Trigger: TTCAGATTCGAGCCCTAGCCACCCCTGGCCACACTC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATAGCCGTCATCACTGGTaGGGCCTGGCCCTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGRKSAFNDSERKGGEDSRHHW*GLALAP Trigger: TGGGGCCAGGGCCAGGCCCCACCAGTGATGACGGCT...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AGACGTTTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGAGCAGCCGTCATCACTaGTGGGGCCTGGCCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRFSCFLPLTLNTTCTVWSSRHH*WGLALA Trigger: GGCCAGGGCCAGGCCCCACCAGTGATGACGGCTGCT...CCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CAA 72 bp | TTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTaGGGTGCTGGCAGCAGCTTGGGCATCCTGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFAFGSFHGVEE*GAGSSLGILRP Trigger: AGGGCGCAGGATGCCCAAGCTGCTGCCAGCACCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTGCTGTGGCTCTGCAGTaGTCTGGTCCTGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSAVALQ*SGPVLG Trigger: TCCCAGAACAGGACCAGAGCACTGCAGAGCCACAGC...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGCCCAGGTTCTCTTCTaGGTATTCATGCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFAQVLF*VFMPRP Trigger: TGGCCTGGGCATGAATACGCAGAAGAGAACCTGGGC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGATGGGCATGTGCTCTTaGGTTCCATCCGTTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLMGMCS*VPSVAS Trigger: AGAGGCAACGGATGGAACGCAAGAGCACATGCCCAT...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGTGCCTCTGTACCCACTaGATCTTCCTCTCACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGVKIEQERLSETAGRQCLCTH*IFLSRA Trigger: GGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCA...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCATGGGCATGTGCTCTTaGGTTCCATCCGTTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFMGMCS*VPSVAS Trigger: AGAGGCAACGGATGGAACGCAAGAGCACATGCCCAT...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGGGCGGGGCTGAGTTTTaGAGTGGCCTTTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGGGAEF*SGLWDS Trigger: GCTATCCCAAAGGCCACTCCAAAACTCAGCCCCGCC...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGCGGTTCCCTCCACTGTaGTCCCAGTGCTTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THWSFLFPDLCYLHTDNKRFPPL*SQCLWV Trigger: CACCCACAAGCACTGGGACCACAGTGGAGGGAACCG...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGGAGTGTGGCCAGGGGTaGCTAGGGCTCGAATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGECGQG*LGLESE Trigger: TTCAGATTCGAGCCCTAGCCACCCCTGGCCACACTC...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGGTTCCTCTCCCAGGGTaGATGGGCATGTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGVPLPG*MGMCSC Trigger: GCAAGAGCACATGCCCATCCACCCTGGGAGAGGAAC...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CAA 72 bp | CATCCTTTGACTCCCTGGCCTGAAGCAGAAGATTCCTaGGCAACCAGGAACCTCTCTCTCTGGCCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPLTPWPEAEDS*ATRNLSLWPSG Trigger: TCCTGAAGGCCAGAGAGAGAGGTTCCTGGTTGCCAAGGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CAA 72 bp | ATGTGCGTGGTGTGTGGCTCTGTGTGCCATCATCCTTaGACTCCCTGGCCTGAAGCAGAAGATTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MCVVCGSVCHHP*TPWPEAEDSLA Trigger: TGCCAAGGAATCTTCTGCTTCAGGCCAGGGAGTCAAAGGATGATGGCACACAGAGCCACACACCACGCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | ACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGAGGGTTGAAGAGGCGGGGCTaGGTTTTGGAGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGASYSQTSAICTLTTRGLKRRG*VLEWPL Trigger: CAAAGGCCACTCCAAAACTCAGCCCCGCCTCTTCAA...CCCTCTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGGGCTCTGCAGTGCTCTaGTCCTGTTCTGGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: THWSFLFPDLCYLHTDNKGSAVL*SCSGKP Trigger: AGGCTTCCCAGAACAGGACCAGAGCACTGCAGAGCC...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGGGGTGAAGATAGAGCAAGAGAGGTTAAGTGAGACAGCAGGCAGGCAGTTTTGGAGTGGCCTTTaGGATAGCGATTCCGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGVKIEQERLSETAGRQFWSGL*DSDSEP Trigger: GGGCTCGGAATCGCTATCCCAAAGGCCACTCCAAAA...CTGCCTGCCTGCTGTCTCACTTAACCTCTCTTGCTCTATCTTCACCCCCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGGGCGGGGCTGAGTTTTaGAGTGGCCTTTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: THWSFLFPDLCYLHTDNKGGAEF*SGLWDS Trigger: GCTATCCCAAAGGCCACTCCAAAACTCAGCCCCGCC...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGGTTCCTCTCCCAGGGTaGATGGGCATGTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: THWSFLFPDLCYLHTDNKVPLPG*MGMCSC Trigger: GCAAGAGCACATGCCCATCCACCCTGGGAGAGGAAC...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATCCAGTGAGCTCAGCATaGTCTCCGCTGTGCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QAGRKSAFNDSERKGGEDPVSSA*SPLCLR Trigger: TCGAAGGCACAGCGGAGACCATGCTGAGCTCACTGG...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AGACGTTTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGCTCTCCCAGGGTGGATaGGCATGTGCTCTTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRFSCFLPLTLNTTCTVWLSQGG*ACALAF Trigger: GAACGCAAGAGCACATGCCCATCCACCCTGGGAGAG...CCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGAAGAAAGTCAGCCTTTAATGACTCAGAGAGGAAAGGGGGTGAAGATTTGAAGAGGCGGGGCTaGGTTTTGGAGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGRKSAFNDSERKGGEDLKRRG*VLEWPL Trigger: CAAAGGCCACTCCAAAACTCAGCCCCGCCTCTTCAA...ATCTTCACCCCCTTTCCTCTCTGAGTCATTAAAGGCTGACTTTCTTCCAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | CTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGTGCGCTCGGGCTCCTCCTTaGATTCTGGTGAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNFICIWLLPRCGRVGCARAPP*ILVSCG Trigger: GCCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGC...GCACCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGCTGTTCTTGGCAGCTaGGGGGACTCAGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRQTCKQVKYGVIGATRAVLGS*GDSGAA Trigger: TGCTGCTCCTGAGTCCCCGCAGCTGCCAAGAACAGC...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
||
| CDS-3UTR CCA 90 bp | ACTCACTGGAGCTTCCTATTCCCAGACCTCTGCTATCTGCACACTGACAACAAGATGGGTTCTCAGGAATaGGTTGTAGGCGCGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: THWSFLFPDLCYLHTDNKMGSQE*VVGAFL Trigger: GAGGAACGCGCCTACAACCCATTCCTGAGAACCCAT...CTTGTTGTCAGTGTGCAGATAGCAGAGGTCTGGGAATAGGAAGCTCCAGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| 3UTR CAA 72 bp | AAGATGTGGCTCCTGGCTAACTCACCTAAGGTGTGCTaGCAAAACGACCATAGTGCTCCTGTGGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KMWLLANSPKVC*QNDHSAPVATK Trigger: CTTTGTGGCCACAGGAGCACTATGGTCGTTTTGCAAGCACACCTTAGGTGAGTTAGCCAGGAGCCACATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCAGAAGAGCAGGTCCCCTaGGAAGAGGCAGGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RQTCKQVKYGVIGATREAEEQVP*EEAGRT Trigger: GGTCCTTCCTGCCTCTTCTCAGGGGACCTGCTCTTC...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR TCA 90 bp | GTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGCTGGGCTTGTTGGGGTaGAGCCCTGAACCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNNFICIWLLPRCGRVGLGLLG*SPEPLA Trigger: AGCCAGAGGTTCAGGGCTTCACCCCAACAAGCCCAG...CCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGACTCTCCCAGGGTGGATaGGCATGTGCTCTTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGRQTCKQVKYGVIGATRLSQGG*ACALAF Trigger: GAACGCAAGAGCACATGCCCATCCACCCTGGGAGAG...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGTTCCTCTCCCAGGGTaGATGGGCATGTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRQTCKQVKYGVIGATRVPLPG*MGMCSC Trigger: GCAAGAGCACATGCCCATCCACCCTGGGAGAGGAAC...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | GTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGCCAACCTCAGGGAACTaGGCTTGTTGGGGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNNFICIWLLPRCGRVGPTSGN*ACWGEA Trigger: GGCTTCACCCCAACAAGCCCAGTTCCCTGAGGTTGG...CCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGCTGTGGCTCTGCAGTaGTCTGGTCCTGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QYLITLFAFGSFHGVEELAVALQ*SGPVLG Trigger: TCCCAGAACAGGACCAGAGCACTGCAGAGCCACAGC...CAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
||
| CDS-3UTR GCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCATGCCTCTGTACCCACTaGATCTTCCTCTCACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQTCKQVKYGVIGATREACLCTH*IFLSRA Trigger: GGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCA...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR GCA 90 bp | AAGGGGAGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAATGGGCATGTGCTCTTaGGTTCCATCCGTTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGRQTCKQVKYGVIGATRMGMCS*VPSVAS Trigger: AGAGGCAACGGATGGAACGCAAGAGCACATGCCCAT...TCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCTCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
||
| CDS-3UTR CCA 90 bp | CAGTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGCTCTGCAGTGCTCTaGTCCTGTTCTGGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QYLITLFAFGSFHGVEELGSAVL*SCSGKP Trigger: AGGCTTCCCAGAACAGGACCAGAGCACTGCAGAGCC...CAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
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| CDS-3UTR TCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCAGAAGTCGTCCCACGCTaGCCACATCTTGATGACACA | + |
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Preference number: 4 (lower is better) Translates to: RQTCKQVKYGVIGATREAEVVPR*PHLDDT Trigger: TGTGTCATCAAGATGTGGTCAGCGTGGGACGACTTC...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR TCA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCACCACTTCCTGCTTGGTaGGGACGAAGAAGAGGATAC | + |
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Preference number: 4 (lower is better) Translates to: RQTCKQVKYGVIGATREAPLPAW*GRRRGY Trigger: GTATCCTCTTCTTCGTCCTCACCAAGCAGGAAGTGG...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087226.11 |
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| CDS-3UTR TCA 90 bp | TGTCAGTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGCCACTTCCTGCTTGGTaGGGACGAAGAAGAGGATAC | + |
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Preference number: 4 (lower is better) Translates to: CQYLITLFAFGSFHGVEEPLPAW*GRRRGY Trigger: GTATCCTCTTCTTCGTCCTCACCAAGCAGGAAGTGG...CTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
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| CDS CCA 90 bp | GCAGCTCCTCCAGGAGCTGGGCCCGGGAGCAGCCGTCATCACTGGTaGGGCCTGGCCCTGGCCCCAGAGCCTCCTGTAGTTCCAGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: AAPPGAGPGSSRHHW*GLALAPEPPVVPGN Trigger: ATTGCCTGGAACTACAGGAGGCTCTGGGGCCAGGGCCAGGCCCCACCAGTGATGACGGCTGCTCCCGGGCCCAGCTCCTGGAGGAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS TCA 90 bp | ACAGGCTATACCCGATTCGGAAGAGCAGCCGCTGGCTGCGCGTCATaGGGAGGCCGCGGAAACCCCGCTGTTCTTGGCAGCTGCGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: TGYTRFGRAAAGCAS*GGRGNPAVLGSCGD Trigger: GTCCCCGCAGCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGCGGCTGCTCTTCCGAATCGGGTATAGCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS CCA 90 bp | CGCTGGCTGCGCGTCATGAGGAGGCCGCGGAAACCCCGCTGTTCTTaGCAGCTGCGGGGACTCAGGAGCAGCACGAAGGCGAAGAATAGC | + |
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Preference number: 5 (lower is better) Translates to: RWLRVMRRPRKPRCS*QLRGLRSSTKAKNS Trigger: GCTATTCTTCGCCTTCGTGCTGCTCCTGAGTCCCCGCAGCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS TCA 90 bp | CATCCTGAGGGCTCCCATACACTCGACAGTCCCTGTGCCGCCGGCTaGGGTCACGGTTCCCTCCACTGTGGTCCCAGTGCTTGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HPEGSHTLDSPCAAG*GHGSLHCGPSACGC Trigger: GCACCCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCACAGGGACTGTCGAGTGTATGGGAGCCCTCAGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CCA 90 bp | CAGGTTCGGGTGTACAGGCTATACCCGATTCGGAAGAGCAGCCGCTaGCTGCGCGTCATGAGGAGGCCGCGGAAACCCCGCTGTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QVRVYRLYPIRKSSR*LRVMRRPRKPRCSW Trigger: CCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGCGGCTGCTCTTCCGAATCGGGTATAGCCTGTACACCCGAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS-3UTR CAA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTGGCTCGGGCTCCTCCTaGCATTCTGGTGAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVGSGSS*HSGELW Trigger: CCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGCC...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | AGCAGGTCTCTGAGGCAGACCACAGTTCACTCTCCCCTGGGAAGGCAGGCAGGCCACGCTGACCACATCTaGATGACACAGGGGGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SRSLRQTTVHSPLGRQAGHADHI*MTQGVG Trigger: ACCCACCCCCTGTGTCATCAAGATGTGGTCAGCGTG...GCCTGCCTGCCTTCCCAGGGGAGAGTGAACTGTGGTCTGCCTCAGAGACCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 90 bp | CTGCATCTTCCTCTCACGAGCCAAGTTCTCGGGCTCCACCACGCCTaGAAAGCCCAGGTTCTCTTCTGCGTATTCATGCCCAGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: LHLPLTSQVLGLHHA*KAQVLFCVFMPRPQ Trigger: CTGTGGCCTGGGCATGAATACGCAGAAGAGAACCTGGGCTTTGCAGGCGTGGTGGAGCCCGAGAACTTGGCTCGTGAGAGGAAGATGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 90 bp | GATGGGCATGTGCTCTTGCGTTCCATCCGTTGCCTCTGTACCCACTaGATCTTCCTCTCACGAGCCAAGTTCTCGGGCTCCACCACGCCT | + |
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Preference number: 5 (lower is better) Translates to: DGHVLLRSIRCLCTH*IFLSRAKFSGSTTP Trigger: AGGCGTGGTGGAGCCCGAGAACTTGGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAGAGCACATGCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | GAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTTCAGTTGCTTCGGCTCGGGCTCCTCCTaGCATTCTGGTGAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: EGRQTLQGSKVWRRFSCFGSGSS*HSGELW Trigger: CCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGCC...GAAGCAACTGAAACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGCTGTGGTCCCAGTGCTaGTGGGTGCAGAGAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: LWPQRALDLRPEDKQIWRLWSQC*WVQRMA Trigger: TGCCATTCTCTGCACCCACAAGCACTGGGACCACAG...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTCACGCTGACCACATCTaGATGACACAGGGGGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVHADHI*MTQGVG Trigger: ACCCACCCCCTGTGTCATCAAGATGTGGTCAGCGTG...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS TCA 90 bp | GTTAACTCTTTCCTTTTCAATGGAAGCCTGCACAGCCCTCGGGTCTaGGGGGTCCACAGCCACTGCCAGCCCAGCCTGGGTGTCGATGAT | + |
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Preference number: 5 (lower is better) Translates to: VNSFLFNGSLHSPRV*GVHSHCQPSLGVDD Trigger: ATCATCGACACCCAGGCTGGGCTGGCAGTGGCTGTGGACCCCTCAGACCCGAGGGCTGTGCAGGCTTCCATTGAAAAGGAAAGAGTTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CCA 90 bp | AATGGGTTCTCAGGAATGGGTTGTAGGCGCGTTCCTCTCCCAGGGTaGATGGGCATGTGCTCTTGCGTTCCATCCGTTGCCTCTGTACCC | + |
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Preference number: 5 (lower is better) Translates to: NGFSGMGCRRVPLPG*MGMCSCVPSVASVP Trigger: GGGTACAGAGGCAACGGATGGAACGCAAGAGCACATGCCCATCCACCCTGGGAGAGGAACGCGCCTACAACCCATTCCTGAGAACCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCACAAAGGGCCCTTGACCTGAGACCAGAGGACAAGCAGATCTGGAGGCTTGCGTTCCATCCGTaGCCTCTGTACCCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LWPQRALDLRPEDKQIWRLAFHP*PLYPLH Trigger: ATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAG...CCTCCAGATCTGCTTGTCCTCTGGTCTCAGGTCAAGGGCCCTTTGTGGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CATGAGTGGGGGAGGGGAGGCAGACCCTCCAAGGTAGCAAAGTCTGGAGACGTTCTTGCGTTCCATCCGTaGCCTCTGTACCCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: HEWGRGGRPSKVAKSGDVLAFHP*PLYPLH Trigger: ATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAG...AACGTCTCCAGACTTTGCTACCTTGGAGGGTCTGCCTCCCCTCCCCCACTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 90 bp | CTGTGCCGCCGGCTGAGGTCACGGTTCCCTCCACTGTGGTCCCAGTaGTTGTGGGTGCAGAGAATGGCAACCAAGTTAACTCTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LCRRLRSRFPPLWSQ*LWVQRMATKLTLSF Trigger: AAAGGAAAGAGTTAACTTGGTTGCCATTCTCTGCACCCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CTTTATTTGCATTTGGCTCCTTCCACGGTGTGGAAGAGTTGGGTGCTGGCAGCAGGCTCGGGCTCCTCCTaGCATTCTGGTGAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LYLHLAPSTVWKSWVLAAGSGSS*HSGELW Trigger: CCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGCC...TGCTGCCAGCACCCAACTCTTCCACACCGTGGAAGGAGCCAAATGCAAATAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
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| CDS-3UTR CAA 90 bp | GCATTTACAGGTGCAGAGGTAGCCTGGAAGAGAGGGGTGAAGGGTGCCTTCCTGCTTGCGTTCCATCCGTaGCCTCTGTACCCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: AFTGAEVAWKRGVKGAFLLAFHP*PLYPLH Trigger: ATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAG...CAGGAAGGCACCCTTCACCCCTCTCTTCCAGGCTACCTCTGCACCTGTAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | CTGGGTTCTAGGGCTCTAGTGGTGGTGTGGCCTCTGGAGCAGGAGCCAAATGCATGCTTCAATCGGTCCTaGTCCACTTCCTGCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LGSRALVVVWPLEQEPNACFNRS*STSCLV Trigger: CACCAAGCAGGAAGTGGACAAGGACCGATTGAAGCA...TGCATTTGGCTCCTGCTCCAGAGGCCACACCACCACTAGAGCCCTAGAACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | AACCCTGCATGGGGGAAGGTGGAAGATAGACTAGCCTGGTCAGGACTCTCTTCTCTGTGGTCCCAGTGCTaGTGGGTGCAGAGAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: NPAWGKVEDRLAWSGLSSLWSQC*WVQRMA Trigger: TGCCATTCTCTGCACCCACAAGCACTGGGACCACAG...AGAAGAGAGTCCTGACCAGGCTAGTCTATCTTCCACCTTCCCCCATGCAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | AGACGTTTCAGTTGCTTCCTTCCTCTTACCCTAAACACCACCTGTACTGTGTGGGAAACCCCGCTGTTCTaGGCAGCTGCGGGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRFSCFLPLTLNTTCTVWETPLF*AAAGTQ Trigger: CTGAGTCCCCGCAGCTGCCAAGAACAGCGGGGTTTC...CCACACAGTACAGGTGGTGTTTAGGGTAAGAGGAAGGAAGCAACTGAAACGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS-3UTR CAA 90 bp | AGACAAACATGTAAACAAGTAAAGTACGGTGTGATAGGTGCCACGAGAGAAGCACACGCTGACCACATCTaGATGACACAGGGGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQTCKQVKYGVIGATREAHADHI*MTQGVG Trigger: ACCCACCCCCTGTGTCATCAAGATGTGGTCAGCGTG...TGCTTCTCTCGTGGCACCTATCACACCGTACTTTACTTGTTTACATGTTTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS-3UTR CAA 90 bp | TTTCCGTGTCAGTACTTAATAACTTTATTTGCATTTGGCTCCTTCCACGGTGTGTGCTTCAATCGGTCCTaGTCCACTTCCTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPCQYLITLFAFGSFHGVCFNRS*STSCLV Trigger: CACCAAGCAGGAAGTGGACAAGGACCGATTGAAGCA...CACACCGTGGAAGGAGCCAAATGCAAATAAAGTTATTAAGTACTGACACGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113805.8 |
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| CDS CCA 72 bp | CGCGTCATGAGGAGGCCGCGGAAACCCCGCTGTTCTTaGCAGCTGCGGGGACTCAGGAGCAGCACGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVMRRPRKPRCS*QLRGLRSSTKA Trigger: CGCCTTCGTGCTGCTCCTGAGTCCCCGCAGCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS CAA 72 bp | GCGCGTCATGAGGAGGCCGCGGAAACCCCGCTGTTCTaGGCAGCTGCGGGGACTCAGGAGCAGCACGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARHEEAAETPLF*AAAGTQEQHEG Trigger: GCCTTCGTGCTGCTCCTGAGTCCCCGCAGCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS TCA 72 bp | ACCCGATTCGGAAGAGCAGCCGCTGGCTGCGCGTCATaGGGAGGCCGCGGAAACCCCGCTGTTCTTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRFGRAAAGCAS*GGRGNPAVLGS Trigger: GCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGCGGCTGCTCTTCCGAATCGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS TCA 72 bp | GGCTCCCATACACTCGACAGTCCCTGTGCCGCCGGCTaGGGTCACGGTTCCCTCCACTGTGGTCCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSHTLDSPCAAG*GHGSLHCGPSA Trigger: AGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCACAGGGACTGTCGAGTGTATGGGAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CCA 72 bp | GTGTACAGGCTATACCCGATTCGGAAGAGCAGCCGCTaGCTGCGCGTCATGAGGAGGCCGCGGAAACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VYRLYPIRKSSR*LRVMRRPRKPR Trigger: GCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCAGCGGCTGCTCTTCCGAATCGGGTATAGCCTGTACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087225.6 |
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| CDS TCA 72 bp | AGGGGAGAGGGGCTCGGGCTCCTCCTTGCATTCTGGTaGGCTGTGGCTCTGCAGTGCTCTGGTCCTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGEGLGLLLAFW*AVALQCSGPVL Trigger: CAGAACAGGACCAGAGCACTGCAGAGCCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGCCCCTCTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 ENSMUST00000113805.8 |
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| CDS CCA 72 bp | AGGGGCTCGGGCTCCTCCTTGCATTCTGGTGAGCTGTaGCTCTGCAGTGCTCTGGTCCTGTTCTGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGSGSSLHSGEL*LCSALVLFWEA Trigger: GGCTTCCCAGAACAGGACCAGAGCACTGCAGAGCCACAGCTCACCAGAATGCAAGGAGGAGCCCGAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087226.11 ENSMUST00000113805.8 |
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| CDS GCA 72 bp | CCTCTCACGAGCCAAGTTCTCGGGCTCCACCACGCCTaGAAAGCCCAGGTTCTCTTCTGCGTATTCATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLTSQVLGLHHA*KAQVLFCVFMP Trigger: GGGCATGAATACGCAGAAGAGAACCTGGGCTTTGCAGGCGTGGTGGAGCCCGAGAACTTGGCTCGTGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CCA 72 bp | TCAGGAATGGGTTGTAGGCGCGTTCCTCTCCCAGGGTaGATGGGCATGTGCTCTTGCGTTCCATCCGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGMGCRRVPLPG*MGMCSCVPSVA Trigger: GGCAACGGATGGAACGCAAGAGCACATGCCCATCCACCCTGGGAGAGGAACGCGCCTACAACCCATTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 72 bp | ACACAGTGTCCAGTGAGCTCAGCATGGTCTCCGCTGTaGCTTCGAAGGTCCGTCCACAGCCAGAGAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TQCPVSSAWSPL*LRRSVHSQRGR Trigger: TCTTCCTCTCTGGCTGTGGACGGACCTTCGAAGGCACAGCGGAGACCATGCTGAGCTCACTGGACACTGTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 72 bp | GTGCTCTTGCGTTCCATCCGTTGCCTCTGTACCCACTaGATCTTCCTCTCACGAGCCAAGTTCTCGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLLRSIRCLCTH*IFLSRAKFSGS Trigger: GGAGCCCGAGAACTTGGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAGAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 72 bp | AGGGTGGATGGGCATGTGCTCTTGCGTTCCATCCGTTaGCTCTGTACCCACTGCATCTTCCTCTCACGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RVDGHVLLRSIR*LCTHCIFLSRA Trigger: GGCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAGAGCACATGCCCATCCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CAA 72 bp | GGCTCGAATCTGAAGTCGTCCCACGCTGACCACATCTaGATGACACAGGGGGTGGGTGAGGTAGGGGATACC | + |
|
Preference number: 6 (lower is better) Translates to: GSNLKSSHADHI*MTQGVGEVGDT Trigger: GGTATCCCCTACCTCACCCACCCCCTGTGTCATCAAGATGTGGTCAGCGTGGGACGACTTCAGATTCGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CAA 72 bp | CAGGGTGGATGGGCATGTGCTCTTGCGTTCCATCCGTaGCCTCTGTACCCACTGCATCTTCCTCTCACGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGGWACALAFHP*PLYPLHLPLTS Trigger: GCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAGAGCACATGCCCATCCACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS GCA 72 bp | CGGCTGAGGTCACGGTTCCCTCCACTGTGGTCCCAGTaGTTGTGGGTGCAGAGAATGGCAACCAAGTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLRSRFPPLWSQ*LWVQRMATKLT Trigger: AGTTAACTTGGTTGCCATTCTCTGCACCCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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| CDS CAA 90 bp | TGCCGCCGGCTGAGGTCACGGTTCCCTCCACTGTGGTCCCAGTGCTaGTGGGTGCAGAGAATGGCAACCAAGTTAACTCTTTCCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRRLRSRFPPLWSQC*WVQRMATKLTLSFS Trigger: TGAAAAGGAAAGAGTTAACTTGGTTGCCATTCTCTGCACCCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027370.13 ENSMUST00000087225.6 ENSMUST00000087226.11 |
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