Pregenerated sensors for PNCK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002012Ensembl transcript IDs: ENSMUST00000002087.14, ENSMUST00000114472.8, ENSMUST00000114473.8, ENSMUST00000144187.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACACAATaGATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: KQDHPQSAKHRTATQ*MCSCKVQEGWLPSP Trigger: TGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR CCA 90 bp | GCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTaGAGGACAAGGATCCAGGAAAGAGACCAAAAGGGCTGGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: AMHHTQSQTFQQRPV*RTRIQERDQKGWRK Trigger: TTTCCTCCAGCCCTTTTGGTCTCTTTCCTGGATCCTTGTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGGAGTCAGTCCACTTaGCCTTCCTTGGCATCTACC | + |
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Preference number: 2 (lower is better) Translates to: LVPCITPSLRLSSRGQSGGSQST*PSLAST Trigger: GGTAGATGCCAAGGAAGGCCAAGTGGACTGACTCCC...TCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATGGTAAGAATAGAGGCTaGGGGACATACTGGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLSFHRGWQRHGKGSLHHGKNRG*GTYWGS Trigger: GCTTCCCCAGTATGTCCCCCAGCCTCTATTCTTACC...ATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCGGGAGTCAGTCCACTTaGCCTTCCTTGGCATCTACC | + |
|
Preference number: 2 (lower is better) Translates to: HRTATQCMCSCKVQEGWLGSQST*PSLAST Trigger: GGTAGATGCCAAGGAAGGCCAAGTGGACTGACTCCC...GAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAGCAGAGGCCAGTCTaGAGGACAAGGATCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TEQPHNACVRARCRKDGSQQRPV*RTRIQE Trigger: TTCCTGGATCCTTGTCCTCCAGACTGGCCTCTGCTG...GGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCGGTAAGAATAGAGGCTaGGGGACATACTGGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TEQPHNACVRARCRKDGSGKNRG*GTYWGS Trigger: GCTTCCCCAGTATGTCCCCCAGCCTCTATTCTTACC...GGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCAGTTTCCATAGAGGGTaGCAGCGACATGGGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HRTATQCMCSCKVQEGWLSFHRG*QRHGKG Trigger: CCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACT...GAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGAGTTTCCATAGAGGGTaGCAGCGACATGGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LKGHNTSRTTHSQQSTEQSFHRG*QRHGKG Trigger: CCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACT...CTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGGAGTCAGTCCACTTaGCCTTCCTTGGCATCTACC | + |
|
Preference number: 2 (lower is better) Translates to: SAKHRTATQCMCSCKVQEGSQST*PSLAST Trigger: GGTAGATGCCAAGGAAGGCCAAGTGGACTGACTCCC...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAAGAGACCAAAAGGGCTaGAGGAAAGAAAAACCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LVPCITPSLRLSSRGQSGRDQKG*RKEKPG Trigger: TCCCGGTTTTTCTTTCCTCCAGCCCTTTTGGTCTCT...TCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCACTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATCAGCAGAGGCCAGTCTaGAGGACAAGGATCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QSTEQPHNACVRARCRKDQQRPV*RTRIQE Trigger: TTCCTGGATCCTTGTCCTCCAGACTGGCCTCTGCTG...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGGTAAGAATAGAGGCTaGGGGACATACTGGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLNTSSVSIEGGSDMGKGGKNRG*GTYWGS Trigger: GCTTCCCCAGTATGTCCCCCAGCCTCTATTCTTACC...TCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTAGTTTCCATAGAGGGTaGCAGCGACATGGGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HNACVRARCRKDGSQVHFSFHRG*QRHGKG Trigger: CCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACT...AAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCAGAGACCAAAAGGGCTaGAGGAAAGAAAAACCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HRTATQCMCSCKVQEGWLRDQKG*RKEKPG Trigger: TCCCGGTTTTTCTTTCCTCCAGCCCTTTTGGTCTCT...GAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR CCA 72 bp | CACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTaGAGGACAAGGATCCAGGAAAGAGACCAAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HTQSQTFQQRPV*RTRIQERDQKG Trigger: GCCCTTTTGGTCTCTTTCCTGGATCCTTGTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR GCA 72 bp | CACCCACAGTCAGCAAAGCACAGAACAGCCACACAATaGATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HPQSAKHRTATQ*MCSCKVQEGWL Trigger: GAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR CCA 72 bp | TCCACTTTTGAACACCTCCTCAGTTTCCATAGAGGGTaGCAGCGACATGGGAAAGGGAGCCTCCACCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: STFEHLLSFHRG*QRHGKGSLHHR Trigger: CCTATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| 3UTR CCA 72 bp | ACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATaGCTCCCAAGTCCACTTTTGAACACCTCCTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: TQCMCSCKVQEG*LPSPLLNTSSV Trigger: AACTGAGGAGGTGTTCAAAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR TCA 90 bp | TGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACGGGCCTGCTGGCAGGTaGACCTCTTCTGGGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHASHPVSDFPAEASLEDGPAGR*TSSGDH Trigger: GTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCC...GTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | GAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATAGGTAAGAATAGAGGCACAGCGCCAAGGACCTaGCCTACAAGGTGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: EGGSDMGKGASTIGKNRGTAPRT*PTRWLA Trigger: CGCCAGCCACCTTGTAGGGCAGGTCCTTGGCGCTGT...GCCTCTATTCTTACCTATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | TGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACCACCACTTGGGGGACTaGCTAGTCCCAAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CHASHPVSDFPAEASLEDHHLGD*LVPRPG Trigger: CCCAGGCCTTGGGACTAGCCAGTCCCCCAAGTGGTG...GTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR TCA 90 bp | GGAGGAACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACGGGCCTGCTGGCAGGTaGACCTCTTCTGGGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: GGTKGPQHKQDHPQSAKHGPAGR*TSSGDH Trigger: GTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCC...GTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGTTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | GGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACACCACCAGGGCCTCCTTaGCCCGAAGTGCTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GPQHKQDHPQSAKHRTATPPGPP*PEVLSW Trigger: CCAAGAAAGCACTTCGGGGCAAGGAGGCCCTGGTGG...TGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | CAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCACAGCGCCAAGGACCTaGCCTACAAGGTGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QPHNACVRARCRKDGSQVTAPRT*PTRWLA Trigger: CGCCAGCCACCTTGTAGGGCAGGTCCTTGGCGCTGT...GACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | GTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACTGCTCCAGGAGCTCTaGGGCCACATATCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VPCITPSLRLSSRGQSGGLLQEL*GHISWG Trigger: ACCCCAGGATATGTGGCCCCAGAGCTCCTGGAGCAG...TCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATGGCCTCCTCACCCTCTaGGCTTTGTCCCAGCTTACG | + |
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Preference number: 4 (lower is better) Translates to: LLSFHRGWQRHGKGSLHHGLLTL*ALSQLT Trigger: CGTAAGCTGGGACAAAGCCCAGAGGGTGAGGAGGCC...ATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATGCAGGATGTAGGAGATaGCACCCAGGGCCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: LLSFHRGWQRHGKGSLHHAGCRR*HPGPTH Trigger: ATGTGTGGGCCCTGGGTGTCATCTCCTACATCCTGC...ATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | CTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGACAGCGCCAAGGACCTaGCCTACAAGGTGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LKGHNTSRTTHSQQSTEQTAPRT*PTRWLA Trigger: CGCCAGCCACCTTGTAGGGCAGGTCCTTGGCGCTGT...CTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CTAGTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGGTCATACACTGCCTaGAGGCCTCCTCACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVPCITPSLRLSSRGQSGGSYTA*RPPHPL Trigger: CAGAGGGTGAGGAGGCCTCCAGGCAGTGTATGACCC...TCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR TCA 90 bp | AAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCGCAGGATGTAGGAGATaGCACCCAGGGCCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: KGPQHKQDHPQSAKHRTAAGCRR*HPGPTH Trigger: ATGTGTGGGCCCTGGGTGTCATCTCCTACATCCTGC...GGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | CACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCACCAGGGCCTCCTTaGCCCGAAGTGCTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HRTATQCMCSCKVQEGWLPPGPP*PEVLSW Trigger: CCAAGAAAGCACTTCGGGGCAAGGAGGCCCTGGTGG...GAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATAGATGCTGTAGGGCCTaGTGGCAGGTGAACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSFHRGWQRHGKGSLHHRCCRA*WQVNLF Trigger: GAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCT...ATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | GTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACCAGAGATCCAAAGATaGTGTAGGGCCTGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VPCITPSLRLSSRGQSGGPEIQR*CRACWQ Trigger: CTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGG...TCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | ACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCGGCCTCCTCACCCTCTaGGCTTTGTCCCAGCTTACG | + |
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Preference number: 4 (lower is better) Translates to: TEQPHNACVRARCRKDGSGLLTL*ALSQLT Trigger: CGTAAGCTGGGACAAAGCCCAGAGGGTGAGGAGGCC...GGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR TCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGGCCTGCTGGCAGGTaGACCTCTTCTGGGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDGPAGR*TSSGDH Trigger: GTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCC...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR GCA 90 bp | TGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACGTCCCTATCGAAGGCTaGATCCCCAGAGATCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CHASHPVSDFPAEASLEDVPIEG*IPRDPK Trigger: CTTTGGATCTCTGGGGATGCAGCCTTCGATAGGGAC...GTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATCAGGTGAACCTCTTCTaGGGATCACGTTCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLSFHRGWQRHGKGSLHHQVNLF*GSRSRR Trigger: CCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTG...ATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTGGGTCATACACTGCCTaGAGGCCTCCTCACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HNACVRARCRKDGSQVHFGSYTA*RPPHPL Trigger: CAGAGGGTGAGGAGGCCTCCAGGCAGTGTATGACCC...AAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CTTTTGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGGGTCATACACTGCCTaGAGGCCTCCTCACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLNTSSVSIEGGSDMGKGGSYTA*RPPHPL Trigger: CAGAGGGTGAGGAGGCCTCCAGGCAGTGTATGACCC...TCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | AACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGGCTAGTCCCAAGGCCTaGGTGGCTATGACGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NSHTMHVFVQGAGRMAPKASPKA*VAMTGH Trigger: ATGACCCGTCATAGCCACCCAGGCCTTGGGACTAGC...CTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAACACCACTTGGGGGACTaGCTAGTCCCAAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SAKHRTATQCMCSCKVQEHHLGD*LVPRPG Trigger: CCCAGGCCTTGGGACTAGCCAGTCCCCCAAGTGGTG...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATCACCACTTGGGGGACTaGCTAGTCCCAAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDHHLGD*LVPRPG Trigger: CCCAGGCCTTGGGACTAGCCAGTCCCCCAAGTGGTG...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | ACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTTGAGGGCCACAAGATaGGCAGAGCCCCTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCMCSCKVQEGWLPSPLLRATR*AEPLSW Trigger: CCAGGAAAGGGGCTCTGCTCATCTTGTGGCCCTCAA...AAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGAAGGAGCCCCGCTCCATaGTGCGGTCAAACAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKHRTATQCMCSCKVQEGRSPAP*CGQTVH Trigger: GTGAACTGTTTGACCGCATCATGGAGCGGGGCTCCT...TCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAAGGAGCCCCGCTCCATaGTGCGGTCAAACAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKGPQHKQDHPQSAKHRTRSPAP*CGQTVH Trigger: GTGAACTGTTTGACCGCATCATGGAGCGGGGCTCCT...TGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATACCCTCAGAATCTGGCTaGAGAGTTCAGGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSIEGGSDMGKGASTIPSESG*RVQDRS Trigger: AGAGCGATCCTGAACTCTTCAGCCAGATTCTGAGGG...TATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCCCTCAGAATCTGGCTaGAGAGTTCAGGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPHNACVRARCRKDGSQVPSESG*RVQDRS Trigger: AGAGCGATCCTGAACTCTTCAGCCAGATTCTGAGGG...GACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACGTCCCTATCGAAGGCTaGATCCCCAGAGATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTKGPQHKQDHPQSAKHVPIEG*IPRDPK Trigger: CTTTGGATCTCTGGGGATGCAGCCTTCGATAGGGAC...GTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGTTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATCTGCTCCAGGAGCTCTaGGGCCACATATCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDLLQEL*GHISWG Trigger: ACCCCAGGATATGTGGCCCCAGAGCTCCTGGAGCAG...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCTGGCCCTCAGAATCTaGCTGAAGAGTTCAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: QPHNACVRARCRKDGSQVLALRI*LKSSGS Trigger: CGATCCTGAACTCTTCAGCCAGATTCTGAGGGCCAG...GACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACATGCTGTAGGGCCTGCTaGCAGGTGAACCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKGPQHKQDHPQSAKHRTCCRAC*QVNLFW Trigger: CCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCA...TGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGAGCTAGTCCCAAGGCCTaGGTGGCTATGACGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKHRTATQCMCSCKVQEGASPKA*VAMTGH Trigger: ATGACCCGTCATAGCCACCCAGGCCTTGGGACTAGC...TCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| 3UTR CAA 72 bp | TGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTaGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKVQEGWLPSPL*NTSSVSIEGGS Trigger: GCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACATCTCATAGACACTGCTaGTGTCCTCCGTCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPQHKQDHPQSAKHRTATSHRHC*CPPSVS Trigger: AGAAACAGACGGAGGACATCAGCAGTGTCTATGAGA...TGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATTTGAGGGCCACAAGATaGGCAGAGCCCCTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDLRATR*AEPLSW Trigger: CCAGGAAAGGGGCTCTGCTCATCTTGTGGCCCTCAA...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGCAGGATGTAGGAGATaGCACCCAGGGCCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDAGCRR*HPGPTH Trigger: ATGTGTGGGCCCTGGGTGTCATCTCCTACATCCTGC...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCCTCAGAATCTGGCTaGAGAGTTCAGGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGHNTSRTTHSQQSTEQPSESG*RVQDRS Trigger: AGAGCGATCCTGAACTCTTCAGCCAGATTCTGAGGG...CTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAAGATGCTGTAGGGCCTaGTGGCAGGTGAACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKGPQHKQDHPQSAKHRTRCCRA*WQVNLF Trigger: GAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCT...TGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGACCAGAGATCCAAAGATaGTGTAGGGCCTGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKHRTATQCMCSCKVQEGPEIQR*CRACWQ Trigger: CTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGG...TCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATAGGTCACGTTCCAGAAGGTaGCGAATGAAGTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFHRGWQRHGKGSLHHRSRSRR*RMKSLA Trigger: AGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGA...CCTATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATTGCTGTAGGGCCTGCTaGCAGGTGAACCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDCCRAC*QVNLFW Trigger: CCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCA...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAATGCTGTAGGGCCTGCTaGCAGGTGAACCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAKHRTATQCMCSCKVQECCRAC*QVNLFW Trigger: CCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCA...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACAGCTTCCAGTGGGTCCTaGCAAAATTCTTCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GPQHKQDHPQSAKHRTATASSGS*QNSSGS Trigger: AGATCCAGAAGAATTTTGCCAGGACCCACTGGAAGC...TGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGCTAGTCCCAAGGCCTaGGTGGCTATGACGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDASPKA*VAMTGH Trigger: ATGACCCGTCATAGCCACCCAGGCCTTGGGACTAGC...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGATCTCATAGACACTGCTaGTGTCCTCCGTCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPCITPSLRLSSRGQSGSHRHC*CPPSVS Trigger: AGAAACAGACGGAGGACATCAGCAGTGTCTATGAGA...TCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGAGTCCCTATCGAAGGCTaGATCCCCAGAGATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKHRTATQCMCSCKVQEGVPIEG*IPRDPK Trigger: CTTTGGATCTCTGGGGATGCAGCCTTCGATAGGGAC...TCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACAAAATTCTTCTGGATCTaGTCACTGACAGAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPQHKQDHPQSAKHRTATKFFWI*SLTEPR Trigger: CCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTT...TGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACAAATTCTTCTGGATCTaGTCACTGACAGAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHASHPVSDFPAEASLEDKFFWI*SLTEPR Trigger: CCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTT...GTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGACTGCCAGCTTGTATTTTaGACAGGCCAAAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHASHPVSDFPAEASLEDCQLVF*TGQSQR Trigger: TCTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCA...GTCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCTGGCCCTCAGAATCTaGCTGAAGAGTTCAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: PQSAKHRTATQCMCSCKVLALRI*LKSSGS Trigger: CGATCCTGAACTCTTCAGCCAGATTCTGAGGGCCAG...CACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCTCACGTTCCAGAAGGTaGCGAATGAAGTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGPQHKQDHPQSAKHRTASRSRR*RMKSLA Trigger: AGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGA...GGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGTGAACCTCTTCTaGGGATCACGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSAKHRTATQCMCSCKVQVNLF*GSRSRR Trigger: CCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTG...CACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCGCTTCCAGTGGGTCCTaGCAAAATTCTTCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KGPQHKQDHPQSAKHRTAASSGS*QNSSGS Trigger: AGATCCAGAAGAATTTTGCCAGGACCCACTGGAAGC...GGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACACTCCTTGCCCCGAAGTaGTTTCTTGGGAATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGPQHKQDHPQSAKHRTLLAPK*FLGNAL Trigger: AAGTGCATTCCCAAGAAAGCACTTCGGGGCAAGGAG...TGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCCTGTGCCTAGCATGTTaGCAGCTTGTATTTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KGPQHKQDHPQSAKHRTALCLAC*QLVFWT Trigger: TGTCCAAAATACAAGCTGGCAACATGCTAGGCACAG...GGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAAGTCCTCAAAAGGTGTaGCATAGAGGAGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPCITPSLRLSSRGQSGSPQKV*HRGGFQ Trigger: CTGAAAACCTCCTCTATGCCACACCTTTTGAGGACT...TCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATATGCCAGCTTGTATTTTaGACAGGCCAAAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSIEGGSDMGKGASTICQLVF*TGQSQR Trigger: TCTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCA...TATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAACAGGTGAACCTCTTCTaGGGATCACGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAKHRTATQCMCSCKVQEQVNLF*GSRSRR Trigger: CCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTG...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGTCTCATAGACACTGCTaGTGTCCTCCGTCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSAKHRTATQCMCSCKVQSHRHC*CPPSVS Trigger: AGAAACAGACGGAGGACATCAGCAGTGTCTATGAGA...CTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATCTCCTTGCCCCGAAGTaGTTTCTTGGGAATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDLLAPK*FLGNAL Trigger: AAGTGCATTCCCAAGAAAGCACTTCGGGGCAAGGAG...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAACTCCTTGCCCCGAAGTaGTTTCTTGGGAATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SAKHRTATQCMCSCKVQELLAPK*FLGNAL Trigger: AAGTGCATTCCCAAGAAAGCACTTCGGGGCAAGGAG...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGCTGTTACCAGCTCCATaGCCAAGTAGAGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSAKHRTATQCMCSCKVQLLPAP*PSRDEK Trigger: CTTCTCATCTCTACTTGGCCATGGAGCTGGTAACAG...CTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGTGCCAGCTTGTATTTTaGACAGGCCAAAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKGHNTSRTTHSQQSTEQCQLVF*TGQSQR Trigger: TCTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCA...CTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACAAGCAGCTGCTCCAGGAGCTCTaGGGCCACATATCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLYWLGKGGTKGPQHKQLLQEL*GHISWG Trigger: ACCCCAGGATATGTGGCCCCAGAGCTCCTGGAGCAG...CTGCTTGTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTTCACGTTCCAGAAGGTaGCGAATGAAGTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNACVRARCRKDGSQVHFSRSRR*RMKSLA Trigger: AGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGA...AAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACAAGCAGGGCCTCCTCACCCTCTaGGCTTTGTCCCAGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: VCLYWLGKGGTKGPQHKQGLLTL*ALSQLT Trigger: CGTAAGCTGGGACAAAGCCCAGAGGGTGAGGAGGCC...CTGCTTGTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCTGTGCCTAGCATGTTaGCAGCTTGTATTTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQSAKHRTATQCMCSCKVLCLAC*QLVFWT Trigger: TGTCCAAAATACAAGCTGGCAACATGCTAGGCACAG...CACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR GCA 90 bp | ACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTAAATTCTTCTGGATCTaGTCACTGACAGAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCMCSCKVQEGWLPSPLKFFWI*SLTEPR Trigger: CCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTT...AAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATCTGTTACCAGCTCCATaGCCAAGTAGAGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSTEQPHNACVRARCRKDLLPAP*PSRDEK Trigger: CTTCTCATCTCTACTTGGCCATGGAGCTGGTAACAG...ATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACCTGTTACCAGCTCCATaGCCAAGTAGAGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLYWLGKGGTKGPQHLLPAP*PSRDEK Trigger: CTTCTCATCTCTACTTGGCCATGGAGCTGGTAACAG...GTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAACAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACAAGCAGGCTTCCAGTGGGTCCTaGCAAAATTCTTCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VCLYWLGKGGTKGPQHKQASSGS*QNSSGS Trigger: AGATCCAGAAGAATTTTGCCAGGACCCACTGGAAGC...CTGCTTGTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACAAGCAGAGTCCTCAAAAGGTGTaGCATAGAGGAGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCLYWLGKGGTKGPQHKQSPQKV*HRGGFQ Trigger: CTGAAAACCTCCTCTATGCCACACCTTTTGAGGACT...CTGCTTGTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACAGCCACATCCACCAGGGCCTCCTaGCCCCGAAGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPQHKQDHPQSAKHRTATSTRAS*PRSAFL Trigger: CAAGAAAGCACTTCGGGGCAAGGAGGCCCTGGTGGA...TGTGGCTGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 90 bp | TCGAAGGCTGCATCCCCAGAGATCCAAAGATGCTGTAGGGCCTGCTaGCAGGTGAACCTCTTCTGGGGATCACGTTCCAGAAGGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SKAASPEIQRCCRAC*QVNLFWGSRSRRWR Trigger: TCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGGGGATGCAGCCTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS TCA 90 bp | CTGGAGGCCTCCTCACCCTCTGGGCTTTGTCCCAGCTTACGGATGTaGCGTAGGAATGATGTGGCATTGAATGCACGCTTCCAGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEASSPSGLCPSLRM*RRNDVALNARFQWV Trigger: GACCCACTGGAAGCGTGCATTCAATGCCACATCATTCCTACGTCACATCCGTAAGCTGGGACAAAGCCCAGAGGGTGAGGAGGCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS GCA 90 bp | CTATCGAAGGCTGCATCCCCAGAGATCCAAAGATGCTGTAGGGCCTaGTGGCAGGTGAACCTCTTCTGGGGATCACGTTCCAGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSKAASPEIQRCCRA*WQVNLFWGSRSRRW Trigger: CCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGGGGATGCAGCCTTCGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACCAGGGCCTCCTaGCCCCGAAGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSHTMHVFVQGAGRMAPKSTRAS*PRSAFL Trigger: CAAGAAAGCACTTCGGGGCAAGGAGGCCCTGGTGGA...CTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGACCCCGAAGTGCTTTCTaGGGAATGCACTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLNTSSVSIEGGSDMGKGPRSAF*GMHLRA Trigger: GGCCCTCAAGTGCATTCCCAAGAAAGCACTTCGGGG...TCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATGGCTCCCAAGTCCACTTTCCCCGAAGTGCTTTCTaGGGAATGCACTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HNACVRARCRKDGSQVHFPRSAF*GMHLRA Trigger: GGCCCTCAAGTGCATTCCCAAGAAAGCACTTCGGGG...AAAGTGGACTTGGGAGCCATCCTTCCTGCACCTTGCACGAACACATGCATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGCCCCGAAGTGCTTTCTaGGGAATGCACTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSAKHRTATQCMCSCKVQPRSAF*GMHLRA Trigger: GGCCCTCAAGTGCATTCCCAAGAAAGCACTTCGGGG...CTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATAGGTAAGAATAGAGGCGCTGTGCCTAGCATGTaGCCAGCTTGTATTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGGSDMGKGASTIGKNRGAVPSM*PACILD Trigger: GTCCAAAATACAAGCTGGCAACATGCTAGGCACAGC...GCCTCTATTCTTACCTATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 90 bp | GAGATCCAAAGATGCTGTAGGGCCTGCTGGCAGGTGAACCTCTTCTaGGGATCACGTTCCAGAAGGTGGCGAATGAAGTCTTTGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EIQRCCRACWQVNLF*GSRSRRWRMKSLAD Trigger: ATCAGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCATGCATCACACCCAGTCTCAGACTTTCCAGCAGAGGCCAGTCTGGAGGATCAGAGACCATGATCTaGGAGTCCTCAAAAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPCITPSLRLSSRGQSGGSETMI*ESSKGV Trigger: CACACCTTTTGAGGACTCCAAGATCATGGTCTCTGA...TCCTCCAGACTGGCCTCTGCTGGAAAGTCTGAGACTGGGTGTGATGCATGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCCTCCACCATAGGTTGCCAGCTTGTATTTaGGACAGGCCAAAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFHRGWQRHGKGSLHHRLPACI*DRPKSE Trigger: CTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCAA...CCTATGGTGGAGGCTCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS GCA 90 bp | TTGAATGCACGCTTCCAGTGGGTCCTGGCAAAATTCTTCTGGATCTaGTCACTGACAGAACCCAGGATGTCCCTATCGAAGGCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LNARFQWVLAKFFWI*SLTEPRMSLSKAAS Trigger: GGATGCAGCCTTCGATAGGGACATCCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTTTGCCAGGACCCACTGGAAGCGTGCATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 90 bp | GCCTGCTGGCAGGTGAACCTCTTCTGGGGATCACGTTCCAGAAGGTaGCGAATGAAGTCTTTGGCTGATTCTGAGATGTCATCCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ACWQVNLFWGSRSRR*RMKSLADSEMSSQK Trigger: CTTTTGGGATGACATCTCAGAATCAGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGAGCTGTGCCTAGCATGTaGCCAGCTTGTATTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLNTSSVSIEGGSDMGKGAVPSM*PACILD Trigger: GTCCAAAATACAAGCTGGCAACATGCTAGGCACAGC...TCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAACACCTCCTCAGTTTCCATAGAGGGTGGCAGCGACATGGGAAAGGGATCAGAGACCATGATCTaGGAGTCCTCAAAAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNTSSVSIEGGSDMGKGSETMI*ESSKGV Trigger: CACACCTTTTGAGGACTCCAAGATCATGGTCTCTGA...TCCCTTTCCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAAGGGCCACAACACAAGCAGGACCACCCACAGTCAGCAAAGCACAGAACATTGCCAGCTTGTATTTaGGACAGGCCAAAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TKGPQHKQDHPQSAKHRTLPACI*DRPKSE Trigger: CTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCAA...TGTTCTGTGCTTTGCTGACTGTGGGTGGTCCTGCTTGTGTTGTGGCCCTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGGATTGCCAGCTTGTATTTaGGACAGGCCAAAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKHRTATQCMCSCKVQEGLPACI*DRPKSE Trigger: CTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCAA...TCCTTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAAGCACAGAACAGCCACACAATGCATGTGTTCGTGCAAGGTGCAGGAAGCTGTGCCTAGCATGTaGCCAGCTTGTATTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAKHRTATQCMCSCKVQEAVPSM*PACILD Trigger: GTCCAAAATACAAGCTGGCAACATGCTAGGCACAGC...TTCCTGCACCTTGCACGAACACATGCATTGTGTGGCTGTTCTGTGCTTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGTTTGTCTTTATTGGTTAGGAAAAGGAGGAACTAAAGGGCCACAACACTCAGAGACCATGATCTaGGAGTCCTCAAAAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSVCLYWLGKGGTKGPQHSETMI*ESSKGV Trigger: CACACCTTTTGAGGACTCCAAGATCATGGTCTCTGA...GTGTTGTGGCCCTTTAGTTCCTCCTTTTCCTAACCAATAAAGACAAACAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 72 bp | CAAGGCCTGGGTGGCTATGACGGGTCATACACTGCCTaGAGGCCTCCTCACCCTCTGGGCTTTGTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGLGGYDGSYTA*RPPHPLGFVPA Trigger: AGCTGGGACAAAGCCCAGAGGGTGAGGAGGCCTCCAGGCAGTGTATGACCCGTCATAGCCACCCAGGCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS GCA 72 bp | GCTGCATCCCCAGAGATCCAAAGATGCTGTAGGGCCTaGTGGCAGGTGAACCTCTTCTGGGGATCACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AASPEIQRCCRA*WQVNLFWGSRS Trigger: GGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGGGGATGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS TCA 72 bp | CAGAGATCCAAAGATGCTGTAGGGCCTGCTGGCAGGTaGACCTCTTCTGGGGATCACGTTCCAGAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSKDAVGPAGR*TSSGDHVPEGG Trigger: GCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 72 bp | GCATCCCCAGAGATCCAAAGATGCTGTAGGGCCTGCTaGCAGGTGAACCTCTTCTGGGGATCACGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASPEIQRCCRAC*QVNLFWGSRSR Trigger: TCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCTTTGGATCTCTGGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 72 bp | AGATGCTGTAGGGCCTGCTGGCAGGTGAACCTCTTCTaGGGATCACGTTCCAGAAGGTGGCGAATGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RCCRACWQVNLF*GSRSRRWRMKS Trigger: AGACTTCATTCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS TCA 72 bp | CATGGACGTCCTCCAGAGCCACAATGTTGGGATGGCTaGTTCTGCGAAGTACCGCGATCTCATTCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: HGRPPEPQCWDG*FCEVPRSHSPP Trigger: TGGTGGAGAATGAGATCGCGGTACTTCGCAGAATCAGCCATCCCAACATTGTGGCTCTGGAGGACGTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 ENSMUST00000144187.2 |
||
| CDS CAA 72 bp | GAAGGACTCTCATGGACGTCCTCCAGAGCCACAATGTaGGGATGGCTGATTCTGCGAAGTACCGCGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EGLSWTSSRATM*GWLILRSTAIS Trigger: TGAGATCGCGGTACTTCGCAGAATCAGCCATCCCAACATTGTGGCTCTGGAGGACGTCCATGAGAGTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 ENSMUST00000144187.2 |
||
| CDS TCA 72 bp | TCCTCACCCTCTGGGCTTTGTCCCAGCTTACGGATGTaGCGTAGGAATGATGTGGCATTGAATGCACGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSGLCPSLRM*RRNDVALNARF Trigger: GAAGCGTGCATTCAATGCCACATCATTCCTACGTCACATCCGTAAGCTGGGACAAAGCCCAGAGGGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS GCA 72 bp | CGCTTCCAGTGGGTCCTGGCAAAATTCTTCTGGATCTaGTCACTGACAGAACCCAGGATGTCCCTATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFQWVLAKFFWI*SLTEPRMSLSK Trigger: CTTCGATAGGGACATCCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTTTGCCAGGACCCACTGGAAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||
| CDS CCA 72 bp | TGCGGTCAAACAGTTCACCACCTGTTACCAGCTCCATaGCCAAGTAGAGATGAGAAGGACTCTCATGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: CGQTVHHLLPAP*PSRDEKDSHGR Trigger: ACGTCCATGAGAGTCCTTCTCATCTCTACTTGGCCATGGAGCTGGTAACAGGTGGTGAACTGTTTGACCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 ENSMUST00000144187.2 |
||
| CDS CCA 72 bp | CAGGTGAACCTCTTCTGGGGATCACGTTCCAGAAGGTaGCGAATGAAGTCTTTGGCTGATTCTGAGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QVNLFWGSRSRR*RMKSLADSEMS Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATTCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002087.14 ENSMUST00000114472.8 ENSMUST00000114473.8 |
||