Pregenerated sensors for PMVK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027952Ensembl transcript IDs: ENSMUST00000029564.12, ENSMUST00000107410.8, ENSMUST00000184515.2, ENSMUST00000198440.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCTGCCCAGACCTCTGGCAAGCCAGACTGTCTGTCTGTTTGCTaGCCTCGGCTGGGACTGGGGACCCACATCTGGCAGAACCACTGT | + |
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Preference number: 1 (lower is better) Translates to: HPAQTSGKPDCLSVC*PRLGLGTHIWQNHC Trigger: ACAGTGGTTCTGCCAGATGTGGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGACAGTCTGGCTTGCCAGAGGTCTGGGCAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CCA 90 bp | GGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTaGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: GKHHHHSSAACPSWV*QCSCLRQNSCACLC Trigger: GCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CCA 90 bp | CACACAGGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATaGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: HTGKHHHHSSAACPS*VWQCSCLRQNSCAC Trigger: GCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 90 bp | GAGAGCGTACACACAGGGAAACACCACCATCACAGCTCTGCAGCCTaGCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCA | + |
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Preference number: 1 (lower is better) Translates to: ESVHTGKHHHHSSAA*PSWVWQCSCLRQNS Trigger: TGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTGTACGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 90 bp | GTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTaGCCTATAAGTGCCCTAAAGAGGCAGAGTGTCCTCTCCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: VWQCSCLRQNSCACL*PISALKRQSVLSRE Trigger: TTCCCTGGAGAGGACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 90 bp | TCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTaGCTTTGCCCTATAAGTGCCCTAAAGAGGCAGAGTGTCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SWVWQCSCLRQNSCA*LCPISALKRQSVLS Trigger: GGAGAGGACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 90 bp | TGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATaGGCCTGCCTTTGCCCTATAAGTGCCCTAAAGAGGCAGAGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: CPSWVWQCSCLRQNS*ACLCPISALKRQSV Trigger: GACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 90 bp | ACAACACCAGAGGTTTCTTTATTTGCCCACTACTCACGAGCATCCTaGCCAGACCTCTGGCAAGCCAGACTGTCTGTCTGTTTGCTGACC | + |
|
Preference number: 1 (lower is better) Translates to: TTPEVSLFAHYSRAS*PDLWQARLSVCLLT Trigger: GGTCAGCAAACAGACAGACAGTCTGGCTTGCCAGAGGTCTGGGCAGGATGCTCGTGAGTAGTGGGCAAATAAAGAAACCTCTGGTGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CAA 90 bp | CGAGCATCCTGCCCAGACCTCTGGCAAGCCAGACTGTCTGTCTGTTaGCTGACCTCGGCTGGGACTGGGGACCCACATCTGGCAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RASCPDLWQARLSVC*LTSAGTGDPHLAEP Trigger: TGGTTCTGCCAGATGTGGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGACAGTCTGGCTTGCCAGAGGTCTGGGCAGGATGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTTACTCACGAGCATCCTaGCCAGACCTCTGGCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ALQPAHHGCGNVPASGKTYSRAS*PDLWQA Trigger: GGCTTGCCAGAGGTCTGGGCAGGATGCTCGTGAGTA...AGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CAA 90 bp | GGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTaGCCCTATAAGTGCCCTAAAGAGGCAGAGTGTCCTCTCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVAMFLPQAKLMRLP*PYKCPKEAECPLQG Trigger: TCCCTGGAGAGGACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR TCA 72 bp | CAGACCTCTGGCAAGCCAGACTGTCTGTCTGTTTGCTaGCCTCGGCTGGGACTGGGGACCCACATCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QTSGKPDCLSVC*PRLGLGTHIWQ Trigger: CTGCCAGATGTGGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGACAGTCTGGCTTGCCAGAGGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | CACACAGGGAAACACCACCATCACAGCTCTGCAGCCTaGCCATCATGGGTGTGGCAATGTTCCTGCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTGKHHHHSSAA*PSWVWQCSCLR Trigger: CCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CCA 72 bp | CACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTaGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCC | + |
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Preference number: 3 (lower is better) Translates to: HHHSSAACPSWV*QCSCLRQNSCA Trigger: GGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTAGACTGTCTGTCTGTTaGCTGACCTCGGCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: ALQPAHHGCGNVPASGKTRLSVC*LTSAGT Trigger: AGTCCCAGCCGAGGTCAGCAAACAGACAGACAGTCT...AGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | GAGCGTACACACAGGGAAACACCACCATCACAGCTCTaGAGCCTGCCCATCATGGGTGTGGCAATGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ERTHRETPPSQL*SLPIMGVAMFL Trigger: CAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTGTACGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | TGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTaGCCTATAAGTGCCCTAAAGAGGCAGAGTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: CSCLRQNSCACL*PISALKRQSVL Trigger: GAGGACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | TGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATaGGCCTGCCTTTGCCCTATAAGTGCCCTAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WVWQCSCLRQNS*ACLCPISALKR Trigger: CCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CCA 72 bp | AAACACCACCATCACAGCTCTGCAGCCTGCCCATCATaGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KHHHHSSAACPS*VWQCSCLRQNS Trigger: TGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCACAGAGGTTTCTTTATTaGCCCACTACTCACGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HRETPPSQLCSLPIMGVAQRFLY*PTTHEH Trigger: ATGCTCGTGAGTAGTGGGCAAATAAAGAAACCTCTG...TGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | GAGGTTTCTTTATTTGCCCACTACTCACGAGCATCCTaGCCAGACCTCTGGCAAGCCAGACTGTCTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: EVSLFAHYSRAS*PDLWQARLSVC Trigger: ACAGACAGACAGTCTGGCTTGCCAGAGGTCTGGGCAGGATGCTCGTGAGTAGTGGGCAAATAAAGAAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR GCA 72 bp | TGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTaGCTTTGCCCTATAAGTGCCCTAAAGAGGCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: WQCSCLRQNSCA*LCPISALKRQS Trigger: ACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR TCA 72 bp | GCTGTGATCCAAGTAAGTTTATTAGGACTCCAGGGCTaGGAGCGTACACACAGGGAAACACCACCATCACAG | + |
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Preference number: 3 (lower is better) Translates to: AVIQVSLLGLQG*ERTHRETPPSQ Trigger: CTGTGATGGTGGTGTTTCCCTGTGTGTACGCTCTCAGCCCTGGAGTCCTAATAAACTTACTTGGATCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029564.12 |
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| CDS-3UTR CCA 90 bp | CCCACATCTGGCAGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCTCGTCCCCAGCATCGTCCACCCCTaGTGTGAACACCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PTSGRTTVRQAHQSLLVPSIVHP*CEHPAP Trigger: CGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCT...GGGGACGAGCAGAGACTGATGGGCCTGGCGAACAGTGGTTCTGCCAGATGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | CTGGCAAGCCAGACTGTCTGTCTGTTTGCTGACCTCGGCTGGGACTGGGGACCCAGCATCGTCCACCCCTaGTGTGAACACCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LASQTVCLFADLGWDWGPSIVHP*CEHPAP Trigger: CGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCT...GGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGACAGTCTGGCTTGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTGTTTGCTGACCTCGGCTGGGACTGGGGACCCACATCTGGCAGAACCCCGGCAGAAGAAGCCTaGGTCTGCCTGGCGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VCLFADLGWDWGPTSGRTPAEEA*VCLALL Trigger: CAGAAGCGCCAGGCAGACCCAGGCTTCTTCTGCCGG...GGTTCTGCCAGATGTGGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTGTTTGCTGACCTCGGCTGGGACTGGGGACCCACATCTGGCAGAACCAGCATCGTCCACCCCTaGTGTGAACACCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCLFADLGWDWGPTSGRTSIVHP*CEHPAP Trigger: CGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCT...GGTTCTGCCAGATGTGGGTCCCCAGTCCCAGCCGAGGTCAGCAAACAGACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | ACTGGGGACCCACATCTGGCAGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCGAGCATACTCCTCCTTaGGTGGACCAGAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TGDPHLAEPLFARPISLCEHTPP*VDQRAA Trigger: TGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTC...GCAGAGACTGATGGGCCTGGCGAACAGTGGTTCTGCCAGATGTGGGTCCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 |
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| CDS-3UTR TCA 90 bp | TCACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAGTCCAGACCACACTCTaGCTCAGCATCGTCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: SQLCSLPIMGVAMFLPQAVQTTL*LSIVHP Trigger: GGGGTGGACGATGCTGAGTCAGAGTGTGGTCTGGAC...TGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR GCA 90 bp | CACAGGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: HRETPPSQLCSLPIMGVANTQPR*CRLCSE Trigger: CTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTT...TGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCCCGGCAGAAGAAGCCTaGGTCTGCCTGGCGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AACPSWVWQCSCLRQNSCPAEEA*VCLALL Trigger: CAGAAGCGCCAGGCAGACCCAGGCTTCTTCTGCCGG...GCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAGTCCAGACCACACTCTaGCTCAGCATCGTCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: TALQPAHHGCGNVPASGKVQTTL*LSIVHP Trigger: GGGGTGGACGATGCTGAGTCAGAGTGTGGTCTGGAC...TTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | GACTCCAGGGCTGAGAGCGTACACACAGGGAAACACCACCATCACAGCTCTGCAAGCAGGTGCTCCAGCTaGTCCTCCAGGCACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: DSRAESVHTGKHHHHSSASRCSS*SSRHCS Trigger: TGAGCAGTGCCTGGAGGATCAGCTGGAGCACCTGCT...TGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTGTACGCTCTCAGCCCTGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | GCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTAGCAGGTGCTCCAGCTaGTCCTCCAGGCACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ALQPAHHGCGNVPASGKTSRCSS*SSRHCS Trigger: TGAGCAGTGCCTGGAGGATCAGCTGGAGCACCTGCT...AGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAAAGCAGGTGCTCCAGCTaGTCCTCCAGGCACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QLCSLPIMGVAMFLPQAKSRCSS*SSRHCS Trigger: TGAGCAGTGCCTGGAGGATCAGCTGGAGCACCTGCT...TTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | ACCCACATCTGGCAGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCTCGTCCCATACTCCTCCTTGAGTaGACCAGAGAGCCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: THIWQNHCSPGPSVSARPILLLE*TREPQE Trigger: CTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTAT...GGGACGAGCAGAGACTGATGGGCCTGGCGAACAGTGGTTCTGCCAGATGTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGGAGCATACTCCTCCTTaGGTGGACCAGAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LPIMGVAMFLPQAKLMRLEHTPP*VDQRAA Trigger: TGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTC...CAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR TCA 90 bp | CAGGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGAGCATACTCCTCCTTaGGTGGACCAGAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QGNTTITALQPAHHGCGNEHTPP*VDQRAA Trigger: TGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTC...ATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR GCA 90 bp | TCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTGCAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SWVWQCSCLRQNSCACLCNTQPR*CRLCSE Trigger: CTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTT...GCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | CTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCAGAGTGTCCTCTACCTaGTGTGAACACCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LCSLPIMGVAMFLPQAKLRVSST*CEHPAP Trigger: CGGGGCTGGGTGTTCACACCAGGTAGAGGACACTCT...GAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107410.8 |
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| CDS-3UTR GCA 90 bp | CATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: HHGCGNVPASGKTHAPAFNTQPR*CRLCSE Trigger: CTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTT...AAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCATACTCCTCCTTGAGTaGACCAGAGAGCCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AACPSWVWQCSCLRQNSCILLLE*TREPQE Trigger: CTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTAT...GCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR TCA 90 bp | AGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCTCGTCCCCTCAAGCCTCATCCTCCGTGGTTCTCAATaGCCCAGTCAAAGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: RTTVRQAHQSLLVPSSLILRGSQ*PSQSSQ Trigger: TTGGGAACTTTGACTGGGTCATTGAGAACCACGGAG...GATGAGGCTTGAGGGGACGAGCAGAGACTGATGGGCCTGGCGAACAGTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | TTTATTAGGACTCCAGGGCTGAGAGCGTACACACAGGGAAACACCACCATCACAGTCCTCTACCTGGTGTaGACACCCAGCCCCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FIRTPGLRAYTQGNTTITVLYLV*TPSPVA Trigger: AGCAACGGGGCTGGGTGTTCACACCAGGTAGAGGAC...TGTGATGGTGGTGTTTCCCTGTGTGTACGCTCTCAGCCCTGGAGTCCTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107410.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTGCCCTATCTCCGTGGTTCTCAATaGCCCAGTCAAAGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GVAMFLPQAKLMRLPLPYLRGSQ*PSQSSQ Trigger: TTGGGAACTTTGACTGGGTCATTGAGAACCACGGAG...ATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| 3UTR CAA 72 bp | ATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTaGCCCTATAAGTGCCCTAAAGAGGCAGAGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: MFLPQAKLMRLP*PYKCPKEAECP Trigger: AGGACACTCTGCCTCTTTAGGGCACTTATAGGGCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR TCA 90 bp | CATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTCTCCGTGGTTCTCAATaGCCCAGTCAAAGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HHGCGNVPASGKTHAPAFLRGSQ*PSQSSQ Trigger: TTGGGAACTTTGACTGGGTCATTGAGAACCACGGAG...AAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CCA 90 bp | CCAAGTAAGTTTATTAGGACTCCAGGGCTGAGAGCGTACACACAGGGAAACACCATACTCCTCCTTGAGTaGACCAGAGAGCCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSKFIRTPGLRAYTQGNTILLLE*TREPQE Trigger: CTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTAT...GGTGTTTCCCTGTGTGTACGCTCTCAGCCCTGGAGTCCTAATAAACTTACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS GCA 90 bp | TCTGACTCAGCATCGTCCACCCCTGGTGTGAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAGGCCACTACTCGGACTGTCTGTATC | + |
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Preference number: 5 (lower is better) Translates to: SDSASSTPGVNTQPR*CRLCSEATTRTVCI Trigger: GATACAGACAGTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCTGAGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAGAACACCCAGCCCCGTaGCTGTCGACTCTGCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: TALQPAHHGCGNVPASGKEHPAP*LSTLLR Trigger: TCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTC...TTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCGAACACCCAGCCCCGTaGCTGTCGACTCTGCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: LCSLPIMGVAMFLPQAKLEHPAP*LSTLLR Trigger: TCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTC...GAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CAA 90 bp | CAGGGAAACACCACCATCACAGCTCTGCAGCCTGCCCATCATGGGTGTGGCAATCGAGCATACTCCTCCTaGAGTGGACCAGAGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: QGNTTITALQPAHHGCGNRAYSS*SGPESR Trigger: GCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCG...ATTGCCACACCCATGATGGGCAGGCTGCAGAGCTGTGATGGTGGTGTTTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGCCCATCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCGAGCATACTCCTCCTaGAGTGGACCAGAGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: SLPIMGVAMFLPQAKLMRRAYSS*SGPESR Trigger: GCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCG...GCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGATGGGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR CAA 90 bp | TCATGGGTGTGGCAATGTTCCTGCCTCAGGCAAAACTCATGCGCCTGCCTTTGCCGAGCATACTCCTCCTaGAGTGGACCAGAGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: SWVWQCSCLRQNSCACLCRAYSS*SGPESR Trigger: GCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCG...GCAAAGGCAGGCGCATGAGTTTTGCCTGAGGCAGGAACATTGCCACACCCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS TCA 90 bp | CTCAATGACCCAGTCAAAGTTCCCAAAGTTGTCCAGACCACACTCTaGCTCAGCATCGTCCACCCCTGGTGTGAACACCCAGCCCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: LNDPVKVPKVVQTTL*LSIVHPWCEHPAPL Trigger: CAACGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCTGAGTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGACTGGGTCATTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS CCA 90 bp | TCTCTGGAAGTCCAAGCCATGCTCCCGAGCATACTCCTCCTTGAGTaGACCAGAGAGCCGCAGGAGAGCACAGATGTTACCTCCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLEVQAMLPSILLLE*TREPQESTDVTSKS Trigger: AGACTTGGAGGTAACATCTGTGCTCTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCGGGAGCATGGCTTGGACTTCCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGGACCCACATCTGGCAGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCTCAAAGTTCCCAAAGTaGTCCAGACCACACTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TGDPHLAEPLFARPISLCSKFPK*SRPHSD Trigger: GTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGA...GCAGAGACTGATGGGCCTGGCGAACAGTGGTTCTGCCAGATGTGGGTCCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CAA 90 bp | ATCTGGCAGAACCACTGTTCGCCAGGCCCATCAGTCTCTGCTCGTCCCCTCAAGTCAAAGTTCCCAAAGTaGTCCAGACCACACTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IWQNHCSPGPSVSARPLKSKFPK*SRPHSD Trigger: GTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGA...CTTGAGGGGACGAGCAGAGACTGATGGGCCTGGCGAACAGTGGTTCTGCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGGCTGAGAGCGTACACACAGGGAAACACCACCATCACAGCTCTGCAGTCAAAGTTCCCAAAGTaGTCCAGACCACACTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TPGLRAYTQGNTTITALQSKFPK*SRPHSD Trigger: GTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGA...CTGCAGAGCTGTGATGGTGGTGTTTCCCTGTGTGTACGCTCTCAGCCCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS GCA 72 bp | GCATCGTCCACCCCTGGTGTGAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAGGCCACTACTCGGACT | + |
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Preference number: 6 (lower is better) Translates to: ASSTPGVNTQPR*CRLCSEATTRT Trigger: AGTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGGGTGGACGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS CAA 72 bp | AGCATCGTCCACCCCTGGTGTGAACACCCAGCCCCGTaGCTGTCGACTCTGCTCCGAGGCCACTACTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SIVHPWCEHPAP*LSTLLRGHYSD Trigger: GTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGGGTGGACGATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS GCA 72 bp | GAGTGTCCTCTACCTGGTGTGAACACCCAGCCCCGTTaGTGTCGACTCTGCTCCGAGGCCACTACTCGGACT | + |
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Preference number: 6 (lower is better) Translates to: ECPLPGVNTQPR*CRLCSEATTRT Trigger: AGTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGTAGAGGACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107410.8 |
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| CDS CAA 72 bp | AGAGTGTCCTCTACCTGGTGTGAACACCCAGCCCCGTaGCTGTCGACTCTGCTCCGAGGCCACTACTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: RVSSTWCEHPAP*LSTLLRGHYSD Trigger: GTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGTAGAGGACACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107410.8 |
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| CDS TCA 72 bp | AGTGCCCTAAAGAGGCAGAGTGTCCTCTACCTGGTGTaGACACCCAGCCCCGTTGCTGTCGACTCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SALKRQSVLYLV*TPSPVAVDSAP Trigger: CGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGGTAGAGGACACTCTGCCTCTTTAGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107410.8 |
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| CDS GCA 72 bp | CCTGGTGTGAACACCCAGCCCCGTTGCTGTCGACTCTaGTCCGAGGCCACTACTCGGACTGTCTGTATCACA | + |
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Preference number: 6 (lower is better) Translates to: PGVNTQPRCCRL*SEATTRTVCIT Trigger: TGTGATACAGACAGTCCGAGTAGTGGCCTCGGAGCAGAGTCGACAGCAACGGGGCTGGGTGTTCACACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS TCA 72 bp | GGAAGTCCAAGCCATGCTCCCGAGCATACTCCTCCTTaGGTGGACCAGAGAGCCGCAGGAGAGCACAGATGT | + |
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Preference number: 6 (lower is better) Translates to: GSPSHAPEHTPP*VDQRAAGEHRC Trigger: ACATCTGTGCTCTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCGGGAGCATGGCTTGGACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS GCA 72 bp | AGAGCCGCAGGAGAGCACAGATGTTACCTCCAAGTCTaGTCTTCAGCCTCTCGGTCACGAAGTCCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RAAGEHRCYLQV*SSASRSRSPSR Trigger: CCGGGAAGGACTTCGTGACCGAGAGGCTGAAGAGCAGACTTGGAGGTAACATCTGTGCTCTCCTGCGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 |
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| CDS CAA 72 bp | TGGAAGTCCAAGCCATGCTCCCGAGCATACTCCTCCTaGAGTGGACCAGAGAGCCGCAGGAGAGCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: WKSKPCSRAYSS*SGPESRRRAQM Trigger: CATCTGTGCTCTCCTGCGGCTCTCTGGTCCACTCAAGGAGGAGTATGCTCGGGAGCATGGCTTGGACTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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| CDS CCA 72 bp | GATGTCCTCCGTGTGTCACTCACCAGCCAGATAGGCTaGGACACGCCTTCCACAATCTTCCGGCAGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DVLRVSLTSQIG*DTPSTIFRQKK Trigger: CTTCTTCTGCCGGAAGATTGTGGAAGGCGTGTCCCAGCCTATCTGGCTGGTGAGTGACACACGGAGGACATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS TCA 72 bp | CCAGTCAAAGTTCCCAAAGTTGTCCAGACCACACTCTaGCTCAGCATCGTCCACCCCTGGTGTGAACACCCA | + |
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Preference number: 6 (lower is better) Translates to: PVKVPKVVQTTL*LSIVHPWCEHP Trigger: TGGGTGTTCACACCAGGGGTGGACGATGCTGAGTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS TCA 72 bp | GATCCTCCAGGCACTGCTCATCTCCGTGGTTCTCAATaGCCCAGTCAAAGTTCCCAAAGTTGTCCAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: DPPGTAHLRGSQ*PSQSSQSCPDH Trigger: GTGGTCTGGACAACTTTGGGAACTTTGACTGGGTCATTGAGAACCACGGAGATGAGCAGTGCCTGGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS CAA 72 bp | CCGTGGTTCTCAATGACCCAGTCAAAGTTCCCAAAGTaGTCCAGACCACACTCTGACTCAGCATCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PWFSMTQSKFPK*SRPHSDSASST Trigger: GGTGGACGATGCTGAGTCAGAGTGTGGTCTGGACAACTTTGGGAACTTTGACTGGGTCATTGAGAACCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000184515.2 ENSMUST00000198440.5 |
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| CDS GCA 72 bp | AACAGATCATGTCCCTCCGATAGGTCTCCTTGTAGGTaGTCGCATCCAGAAGTCTCTGGAAGTCCAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NRSCPSDRSPCR*SHPEVSGSPSH Trigger: ATGGCTTGGACTTCCAGAGACTTCTGGATGCGAGCACCTACAAGGAGACCTATCGGAGGGACATGATCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029564.12 ENSMUST00000107410.8 ENSMUST00000184515.2 |
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