Pregenerated sensors for PMS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079109Ensembl transcript IDs: ENSMUST00000110709.7, ENSMUST00000148011.8, ENSMUST00000164999.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCACTCCATGCCTGCCGCTGCTAGGCATGCTCAATCCCACCTCTaGGCTTCTCCAACCCCTGCGCGCCCACTCGTCCAAGGGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: WHSMPAAARHAQSHL*ASPTPARPLVQGPD Trigger: ATCAGGCCCTTGGACGAGTGGGCGCGCAGGGGTTGGAGAAGCTCAGAGGTGGGATTGAGCATGCCTAGCAGCGGCAGGCATGGAGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 90 bp | CCAGGAGGCCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATaGCAGTCACCACTCTTCCTAACTGCCGCCTGGACTTCACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PGGPQHRGSWRGNCP*QSPLFLTAAWTSQE Trigger: CTCCTGTGAAGTCCAGGCGGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 90 bp | CATGGCACCTCCTCTTCTCCAGGAGGCCCACAGCACAGAGGAAGCTaGAGGGGCAACTGCCCATGCCAGTCACCACTCTTCCTAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: HGTSSSPGGPQHRGS*RGNCPCQSPLFLTA Trigger: GGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGGAGAAGAGGAGGTGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 90 bp | ATGACCCAGCCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATaGGTTTCGGAGCTGAGGGCAGAGGGCCAAAGCCAGGGCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: MTQPLSSLLGLEETG*VSELRAEGQSQGFS Trigger: TGAAAAGCCCTGGCTTTGGCCCTCTGCCCTCAGCTCCGAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGGCTGGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 90 bp | ACTATGGAGCAGCCCAGGATGGCCTCAGCCTGCCTCTGCTGTGCTTaGACTTGCAGGTCTGTGCCACTCTACCCAGCAGTAGCATGGACT | + |
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Preference number: 1 (lower is better) Translates to: TMEQPRMASACLCCA*TCRSVPLYPAVAWT Trigger: AGTCCATGCTACTGCTGGGTAGAGTGGCACAGACCTGCAAGTTCAAGCACAGCAGAGGCAGGCTGAGGCCATCCTGGGCTGCTCCATAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 90 bp | CCCAGGTCTTTACGTTGTTGCTATACACACAGGACTACTTTAGGGTaGTCACCCACCTGCTCTGGCCAGGCCTGCAGATCCCAAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PRSLRCCYTHRTTLG*SPTCSGQACRSQSG Trigger: GCCACTTTGGGATCTGCAGGCCTGGCCAGAGCAGGTGGGTGAGCACCCTAAAGTAGTCCTGTGTGTATAGCAACAACGTAAAGACCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 90 bp | AAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTCCTAACTaGCGCCTGGACTTCACAGGAGGCATTGTAATTTCTATCTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: KLEGQLPMPVTTLPN*RLDFTGGIVISISH Trigger: GTGAGAGATAGAAATTACAATGCCTCCTGTGAAGTCCAGGCGGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 90 bp | CGGCACAGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTaGAATGGAACTTTCCACTCTAGCTGCACTGAGGAACAGTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: RHRLSSTPCLGPALA*NGTFHSSCTEEQLK Trigger: TTTTAACTGTTCCTCAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCTGTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 90 bp | ATCCAAGAAGGGAGGAACTGGCTAGGCAAGGGAGCAGGATGTACTTaGCCTGGATTTTCCCGATCTAACTGCAAACCATGTGACCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: IQEGRNWLGKGAGCT*PGFSRSNCKPCDLP Trigger: AGGGAGGTCACATGGTTTGCAGTTAGATCGGGAAAATCCAGGTCAAGTACATCCTGCTCCCTTGCCTAGCCAGTTCCTCCCTTCTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 90 bp | CCAAAGCCAGGGCTTTTCATGCCACTCGGAAACAGATCTCGGCCATaGTGTCCTACTGCATTAGGCAAGCAAGATGCAAAGAAATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PKPGLFMPLGNRSRP*CPTALGKQDAKKSW Trigger: CCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGGACACCATGGCCGAGATCTGTTTCCGAGTGGCATGAAAAGCCCTGGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 90 bp | AAACAGATCTCGGCCATGGTGTCCTACTGCATTAGGCAAGCAAGATaGAAAGAAATCCTGGGGTGGAAAGAAATCTGGTCCAGGTTCGTG | + |
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Preference number: 1 (lower is better) Translates to: KQISAMVSYCIRQAR*KEILGWKEIWSRFV Trigger: CACGAACCTGGACCAGATTTCTTTCCACCCCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGGACACCATGGCCGAGATCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACAAAGTCAAATTaGAGAACAGTAACTGCAGACATGGTAAAAAGGCTTCAAAAATAT | + |
|
Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTKSN*RTVTADMVKRLQKY Trigger: ATATTTTTGAAGCCTTTTTACCATGTCTGCAGTTACTGTTCTGCAATTTGACTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTCGCTGCCTCAGACACTaGGGTGAGGGTGGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLRCLRH*GEGGWV Trigger: CACCCACCCACCCTCACCCCAGTGTCTGAGGCAGCG...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCTTCTCCAGGAGGCCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCTATGTGACACACACCTaGGATCCCAGCTCTTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PPLLQEAHSTEEAGGATAYVTHT*DPSSWA Trigger: GGCCCAAGAGCTGGGATCCCAGGTGTGTGTCACATA...GGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGGAGAAGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CAA 90 bp | GGAGCAGCCCAGGATGGCCTCAGCCTGCCTCTGCTGTGCTTGAACTaGCAGGTCTGTGCCACTCTACCCAGCAGTAGCATGGACTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: GAAQDGLSLPLLCLN*QVCATLPSSSMDFD Trigger: GTCAAAGTCCATGCTACTGCTGGGTAGAGTGGCACAGACCTGCAAGTTCAAGCACAGCAGAGGCAGGCTGAGGCCATCCTGGGCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGTATGTAACCCTCTCTGGCCTGGGACTATGGAGCAGCCCAGGATGGCCTAGTCCTGGGCTCACATaGGCCTCCCACCGGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: FWYVTLSGLGLWSSPGWPSPGLT*ASHRDL Trigger: GAGATCCCGGTGGGAGGCTCATGTGAGCCCAGGACT...AGGCCATCCTGGGCTGCTCCATAGTCCCAGGCCAGAGAGGGTTACATACCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CAA 90 bp | AGCTACGGCACAGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTaGCCTGGAATGGAACTTTCCACTCTAGCTGCACTGAGGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SYGTDYLLLPASAQP*PGMELSTLAALRNS Trigger: ACTGTTCCTCAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCTGTGCCGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCAGTTTCACAAAACGCTaGCTCAGACACTGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLSSTPCLGPALAWNGTFSFTKR*LRHWGE Trigger: CTCACCCCAGTGTCTGAGGCAGCGTTTTGTGAAACT...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTTGGGAAAAGGAGTCAAGTGGGAAACTCGAGAGTAGTCCTGTGGTAGAGCAGCACAGAGGAAGCTaGAGGGGCAACTGCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: ISWEKESSGKLESSPVVEQHRGS*RGNCPC Trigger: GCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTG...CTCTACCACAGGACTACTCTCGAGTTTCCCACTTGACTCCTTTTCCCAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCCTGAGACCCTGTGGTTaGAGCTGGACTAGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QAALHSQLEQPFTLGFLVLRPCG*SWTSSV Trigger: CACACTGCTAGTCCAGCTCCAACCACAGGGTCTCAG...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR GCA 90 bp | GTATATACTAAAGCCAGAGTTACAACAATTTCTTGGGAAAAGGAGTCAAGTGGGAGCTGGAGGGGCAACTaGCCATGCCAGTCACCACTC | + |
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Preference number: 2 (lower is better) Translates to: VYTKARVTTISWEKESSGSWRGN*PCQSPL Trigger: GAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCT...CCCACTTGACTCCTTTTCCCAAGAAATTGTTGTAACTCTGGCTTTAGTATATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCCACGTGTTCGAGTCTTaGGAGGCTAAGAAGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: QAALHSQLEQPFTLGFLVHVFES*EAKKGT Trigger: AGTTCCCTTCTTAGCCTCCCAAGACTCGAACACGTG...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCAAGTCACAGCATTATTaGACCCAAGGCCAAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: QAALHSQLEQPFTLGFLVKSQHY*TQGQTG Trigger: GCCTGTTTGGCCTTGGGTGCAATAATGCTGTGACTT...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCAAAGTCAAAAGTTGCCACACACACACACACACACACACACACACACACACACACAAAGTCAAATTaGAGAACAGTAACTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GSKSKVATHTHTHTHTHTHTKSN*RTVTAD Trigger: GTCTGCAGTTACTGTTCTGCAATTTGACTTTGTGTG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAACTTTTGACTTTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACTGCATTAGGCAAGCAAGATGCAAAGAAATCCTGGGGTGGAAAGAAATCTCTCACACAGTTCCAATaGACAAGACTCCACAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTALGKQDAKKSWGGKKSLTQFQ*TRLHRN Trigger: GTTTCTGTGGAGTCTTGTCCATTGGAACTGTGTGAG...AGATTTCTTTCCACCCCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 72 bp | GGAGGCCCACAGCACAGAGGAAGCTGGAGGGGCAACTaGCCATGCCAGTCACCACTCTTCCTAACTGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: GGPQHRGSWRGN*PCQSPLFLTAA Trigger: GGCGGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 72 bp | CCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATaGGTTTCGGAGCTGAGGGCAGAGGGCCAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PLSSLLGLEETG*VSELRAEGQSQ Trigger: CTGGCTTTGGCCCTCTGCCCTCAGCTCCGAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 72 bp | CCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATaGCAGTCACCACTCTTCCTAACTGCCGCCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: PQHRGSWRGNCP*QSPLFLTAAWT Trigger: AGTCCAGGCGGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | TCCTCTTCTCCAGGAGGCCCACAGCACAGAGGAAGCTaGAGGGGCAACTGCCCATGCCAGTCACCACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSSPGGPQHRGS*RGNCPCQSPLF Trigger: GAAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGGAGAAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | ACCCTCTCTGGCCTGGGACTATGGAGCAGCCCAGGATaGCCTCAGCCTGCCTCTGCTGTGCTTGAACTTGCA | + |
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Preference number: 3 (lower is better) Translates to: TLSGLGLWSSPG*PQPASAVLELA Trigger: TGCAAGTTCAAGCACAGCAGAGGCAGGCTGAGGCCATCCTGGGCTGCTCCATAGTCCCAGGCCAGAGAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | GAAAGAAATCTGGTCCAGGTTCGTGCCCCCTGGGGGTaGATAGTGTGGCACTCCATGCCTGCCGCTGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: ERNLVQVRAPWG*IVWHSMPAAAR Trigger: CCTAGCAGCGGCAGGCATGGAGTGCCACACTATCCACCCCCAGGGGGCACGAACCTGGACCAGATTTCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCCTGGGATCCCAGCTCTaGGGCCGTGGAGGCAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RLSSTPCLGPALAWNGTFLGSQL*GRGGKL Trigger: GAGCTTGCCTCCACGGCCCAAGAGCTGGGATCCCAG...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 72 bp | ATGCAGGTAGCTAAGCCTTTACAACCTCGGCACACATaGACCATGGCACCTCCTCTTCTCCAGGAGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: MQVAKPLQPRHT*TMAPPLLQEAH Trigger: GTGGGCCTCCTGGAGAAGAGGAGGTGCCATGGTTCATGTGTGCCGAGGTTGTAAAGGCTTAGCTACCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | CTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTaGAATGGAACTTTCCACTCTAGCTGCACTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LSSTPCLGPALA*NGTFHSSCTEE Trigger: TTCCTCAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 72 bp | AAACGAGTCAAGAGAAGCCTGAGTTTCACAAAACGCTaGCTCAGACACTGGGGTGAGGGTGGGTGGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: KRVKRSLSFTKR*LRHWGEGGWVR Trigger: TCTCACCCACCCACCCTCACCCCAGTGTCTGAGGCAGCGTTTTGTGAAACTCAGGCTTCTCTTGACTCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 72 bp | GGGCAACTGCCCATGCCAGTCACCACTCTTCCTAACTaGCGCCTGGACTTCACAGGAGGCATTGTAATTTCT | + |
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Preference number: 3 (lower is better) Translates to: GQLPMPVTTLPN*RLDFTGGIVIS Trigger: AGAAATTACAATGCCTCCTGTGAAGTCCAGGCGGCAGTTAGGAAGAGTGGTGACTGGCATGGGCAGTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR GCA 72 bp | TATACACACAGGACTACTTTAGGGTGCTCACCCACCTaGTCTGGCCAGGCCTGCAGATCCCAAAGTGGCATT | + |
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Preference number: 3 (lower is better) Translates to: YTHRTTLGCSPT*SGQACRSQSGI Trigger: AATGCCACTTTGGGATCTGCAGGCCTGGCCAGAGCAGGTGGGTGAGCACCCTAAAGTAGTCCTGTGTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | GGTGCTCTAAATAGCAAGTTCCAGATCAGCCAGGGCTaGAAGCCCGTCTCATCCCTTTCTACCCACTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GALNSKFQISQG*KPVSSLSTHSK Trigger: TTTGGAGTGGGTAGAAAGGGATGAGACGGGCTTCCAGCCCTGGCTGATCTGGAACTTGCTATTTAGAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCGCTCAAAGTCAAAAGTaGCCACACACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: RLSSTPCLGPALAWNGTFAQSQK*PHTHTH Trigger: GTGTGTGTGTGTGTGTGGCAACTTTTGACTTTGAGC...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCGCCTCGGCCCAGCCCTaGCCTGGAATGGAACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QAALHSQLEQPFTLGFLVASAQP*PGMELS Trigger: GGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGC...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | CATGACCCAGCCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATGAGTTTCCAGGTCTTTACGTTGTaGCTATACACACAGGACTAC | + |
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Preference number: 3 (lower is better) Translates to: HDPAALITTGAGRDRMSFQVFTL*LYTQDY Trigger: GTAGTCCTGTGTGTATAGCAACAACGTAAAGACCTG...GAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGGCTGGGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | CATGACCCAGCCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATGAGTTTCCTAGCAGTGTGTGTCTaGAGACAGAATTTTGGTATG | + |
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Preference number: 3 (lower is better) Translates to: HDPAALITTGAGRDRMSFLAVCV*RQNFGM Trigger: CATACCAAAATTCTGTCTCAAGACACACACTGCTAG...GAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGGCTGGGTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 72 bp | GGGAGGAACTGGCTAGGCAAGGGAGCAGGATGTACTTaGCCTGGATTTTCCCGATCTAACTGCAAACCATGT | + |
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Preference number: 3 (lower is better) Translates to: GRNWLGKGAGCT*PGFSRSNCKPC Trigger: ACATGGTTTGCAGTTAGATCGGGAAAATCCAGGTCAAGTACATCCTGCTCCCTTGCCTAGCCAGTTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | AGGGTCCCTTTATCAATCAAGCACGTGTTCGAGTCTTaGGAGGCTAAGAAGGGAACTGGCCCAGGTCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: RVPLSIKHVFES*EAKKGTGPGLY Trigger: GTAAAGACCTGGGCCAGTTCCCTTCTTAGCCTCCCAAGACTCGAACACGTGCTTGATTGATAAAGGGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | GGGCTTTTCATGCCACTCGGAAACAGATCTCGGCCATaGTGTCCTACTGCATTAGGCAAGCAAGATGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GLFMPLGNRSRP*CPTALGKQDAK Trigger: CTTTGCATCTTGCTTGCCTAATGCAGTAGGACACCATGGCCGAGATCTGTTTCCGAGTGGCATGAAAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR CCA 72 bp | AGCTGGACTAGCAGTGTGTGTCTTGAGACAGAATTTTaGTATGTAACCCTCTCTGGCCTGGGACTATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SWTSSVCLETEF*YVTLSGLGLWS Trigger: GCTCCATAGTCCCAGGCCAGAGAGGGTTACATACCAAAATTCTGTCTCAAGACACACACTGCTAGTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAAGAAGGGAACTGGCCCAGGTCTTTACGTTGTTGCTATACACACAGGACACACACAAAGTCAAATaGCAGAACAGTAACTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RLRRELAQVFTLLLYTQDTHKVK*QNSNCR Trigger: TCTGCAGTTACTGTTCTGCAATTTGACTTTGTGTGT...GTCCTGTGTGTATAGCAACAACGTAAAGACCTGGGCCAGTTCCCTTCTTAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR TCA 72 bp | GGGTTCAGGAAGAGTCAGTATACTTGTCCTCTACTTTaGAGAACTAATGTGACGGACAGTGCCCTTCAGACT | + |
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Preference number: 3 (lower is better) Translates to: GFRKSQYTCPLL*RTNVTDSALQT Trigger: AGTCTGAAGGGCACTGTCCGTCACATTAGTTCTTCAAAGTAGAGGACAAGTATACTGACTCTTCCTGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCGAAGAGTCAGTATACTaGTCCTCTACTTTGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QAALHSQLEQPFTLGFLVEESVY*SSTLKN Trigger: GTTCTTCAAAGTAGAGGACAAGTATACTGACTCTTC...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | GTGGGCATATGTGACACACACCTGGGATCCCAGCTCTaGGGCCGTGGAGGCAAGCTCAGTTCTAGGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VGICDTHLGSQL*GRGGKLSSRPT Trigger: GGTTGGCCTAGAACTGAGCTTGCCTCCACGGCCCAAGAGCTGGGATCCCAGGTGTGTGTCACATATGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCCACTCTAGCTGCACTGAGTCGAGTCCCAACGCTTaGAGACCCGTGGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLGPALAWNGTFHSSCTESSPNA*RPVAGR Trigger: TCTACCTGCCACGGGTCTGCAAGCGTTGGGACTCGA...CTCAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTAGCGCTTGGCATTTGTaGGTGACAGACGAGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLSAWHL*VTDELE Trigger: CTCTAGCTCGTCTGTCACCCACAAATGCCAAGCGCT...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | CAGGATGGCCTCAGCCTGCCTCTGCTGTGCTTGAACTaGCAGGTCTGTGCCACTCTACCCAGCAGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QDGLSLPLLCLN*QVCATLPSSSM Trigger: CATGCTACTGCTGGGTAGAGTGGCACAGACCTGCAAGTTCAAGCACAGCAGAGGCAGGCTGAGGCCATCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCTTCTCCAGGAGGCCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCGAAGGAGAGTTATCTTaGTTTCCTGGCACAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLQEAHSTEEAGGATAEGELS*FPGTGF Trigger: AAAGCCTGTGCCAGGAAAGCAAGATAACTCTCCTTC...GGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGGAGAAGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTGTTAAGTTCAGAGTCTaGGGTGTGATGAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLVKFRV*GVMSLC Trigger: GCAGAGGCTCATCACACCCCAGACTCTGAACTTAAC...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGTCCTGGGCTCACATGAGCCTCCCACCGGGATCTCCCAAGTAGCTGAGGGGTCACAGGGCCTCTaGTTGATGAAGAAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVLGSHEPPTGISQVAEGSQGL*LMKKNC Trigger: GCAGTTTTTCTTCATCAATCAGAGGCCCTGTGACCC...CTCAGCTACTTGGGAGATCCCGGTGGGAGGCTCATGTGAGCCCAGGACTTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCTTCTCCAGGAGGCCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCGGACCAGGCAATCTTTaGGAAATGTTGACATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLQEAHSTEEAGGATAGPGNL*EMLTFE Trigger: CTCAAATGTCAACATTTCTCAAAGATTGCCTGGTCC...GGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGGCCTCCTGGAGAAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCTTCTCATCCGCAGCATaGTGGTCCACCAGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSTPCLGPALAWNGTFFSSAA*WSTRKR Trigger: CCTCTTCCTGGTGGACCAGCATGCTGCGGATGAGAA...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CATGACCCAGCCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATGAGTTTCCAGCCTGGAGATGGATaGTACCCTTTTCTCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HDPAALITTGAGRDRMSFQPGDG*YPFLVC Trigger: GCAGACGAGAAAAGGGTAGCATCCATCTCCAGGCTG...GAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGGCTGGGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | CATGACCCAGCCGCTCTCATCACTACTGGGGCTGGAAGAGACCGGATGAGTTTCAGGCCTCTCTCAGCCTaGAGATGGATGCTACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HDPAALITTGAGRDRMSFRPLSA*RWMLPF Trigger: AAAGGGTAGCATCCATCTCCAGGCTGAGAGAGGCCT...GAAACTCATCCGGTCTCTTCCAGCCCCAGTAGTGATGAGAGCGGCTGGGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | ACAGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTaGCCTGGAATGGAACTTTCCACTCTAGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TDYLLLPASAQP*PGMELSTLAAL Trigger: CAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGTCCTGGGCTCACATGAGCCTCCCACCGGGATCTCCCAAGTAGCTGAGGGTAGAGCTTTGCATTaGTATCCATGGTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVLGSHEPPTGISQVAEGRALH*YPWSSG Trigger: GCCAGAAGACCATGGATATCAATGCAAAGCTCTACC...CTCAGCTACTTGGGAGATCCCGGTGGGAGGCTCATGTGAGCCCAGGACTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTACATCTAGCAGTGGCTaGTGGTTGACATTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLTSSSG*WLTLSL Trigger: CAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGT...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCCACTCTAGCTGCACTGAGCTTTGCAACTGCTTCTaGCCAAACACAGACCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: CLGPALAWNGTFHSSCTELCNCF*PNTDPI Trigger: TATCGGGTCTGTGTTTGGCCAGAAGCAGTTGCAAAG...CTCAGTGCAGCTAGAGTGGAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTATATCCATGGTCTTCTaGCTTCAAGGACTGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLISMVF*LQGLSC Trigger: ACAGGACAGTCCTTGAAGCCAGAAGACCATGGATAT...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTTTGATGAAGAAAAACTaGCTGTCTGTTGCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLLMKKN*LSVALL Trigger: GAGGAGTGCAACAGACAGGCAGTTTTTCTTCATCAA...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | TTGGGCCGTGGAGGCAAGCTCAGTTCTAGGCCAACCTaGGTGACAAAACGAGTCAAGAGAAGCCTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGRGGKLSSRPT*VTKRVKRSLSF Trigger: GAAACTCAGGCTTCTCTTGACTCGTTTTGTCACCAAGGTTGGCCTAGAACTGAGCTTGCCTCCACGGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCACAGAGGAAGCTGGAGGGGCAACTGCCCATGCCAGTCACCACTCTTAATATCCACACATTCTaGGTCAACGGAAACGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQRKLEGQLPMPVTTLNIHTF*VNGNVK Trigger: CTTAACGTTTCCGTTGACTCAGAATGTGTGGATATT...AAGAGTGGTGACTGGCATGGGCAGTTGCCCCTCCAGCTTCCTCTGTGCTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCCAGTTTATGGTTTCCTaGGAAGGTCTGTCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSTPCLGPALAWNGTFQFMVS*EGLSSG Trigger: CCCAGAAGACAGACCTTCTCAGGAAACCATAAACTG...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGGTATGTAACCCTCTCTGGCCTGGGACTATGGAGCAGCCCAGGATGGCCTAGCCCTTTCAGTGACTaGAGCATCCTCATCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FWYVTLSGLGLWSSPGWPSPFSD*SILIND Trigger: GTCATTGATGAGGATGCTCCAGTCACTGAAAGGGCT...AGGCCATCCTGGGCTGCTCCATAGTCCCAGGCCAGAGAGGGTTACATACCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCAGAAGGTCTGTCTTCTaGGGAGCTCACGTTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSTPCLGPALAWNGTFRRSVF*GAHVIV Trigger: GACTATAACGTGAGCTCCCCAGAAGACAGACCTTCT...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCAAAGTCAAAAGTTGCCACACACACACACACACACACACACACACACACATACACGGACGCCTGCTaGGATGATACAGTACGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKSKVATHTHTHTHTHTYTDAC*DDTVRL Trigger: CAGGCGTACTGTATCATCTCAGCAGGCGTCCGTGTA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAACTTTTGACTTTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAAGAAGGGAACTGGCCCAGGTCTTTACGTTGTTGCTATACACACAGGACCAGCTGAGGTGCTGCTaGGCCCTGAGTCTTTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLRRELAQVFTLLLYTQDQLRCC*ALSLFL Trigger: TAGAAAAAGACTCAGGGCTCAGCAGCACCTCAGCTG...GTCCTGTGTGTATAGCAACAACGTAAAGACCTGGGCCAGTTCCCTTCTTAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCCCACTTCTGGGGTGCTaGACCCTTCCTCAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAALHSQLEQPFTLGFLVPLLGC*TLPQSQ Trigger: CTGGCTCTGAGGAAGGGTTCAGCACCCCAGAAGTGG...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | GGGAGGCTAAGAAGGGAACTGGCCCAGGTCTTTACGTaGTTGCTATACACACAGGACTACTTTAGGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLRRELAQVFT*LLYTQDYFRVL Trigger: GAGCACCCTAAAGTAGTCCTGTGTGTATAGCAACAACGTAAAGACCTGGGCCAGTTCCCTTCTTAGCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | AGACTATCTTCTACTCCCTGCCTCGGCCCAGCCCTTGCCTGGAATGGAACTTTCATCTCTTTAGTAGGATaGAGAGAAAAGGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSTPCLGPALAWNGTFISLVG*REKASL Trigger: GAGAGAGGCCTTTTCTCTTCATCCTACTAAAGAGAT...GAAAGTTCCATTCCAGGCAAGGGCTGGGCCGAGGCAGGGAGTAGAAGATAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAGTTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGAGCACCGTGTGCTGCTaGAGCATCTCAAAGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKLQAWLTWRVQEESVYLSTVCC*SISKLY Trigger: GTACAACTTTGAGATGCTGCAGCAGCACACGGTGCT...CAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAACTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGGTATGTAACCCTCTCTGGCCTGGGACTATGGAGCAGCCCAGGATGGCCTTCTAGCAGTGGCTGCTaGTTGACATTAAGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FWYVTLSGLGLWSSPGWPSSSGC*LTLSLF Trigger: AAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGA...AGGCCATCCTGGGCTGCTCCATAGTCCCAGGCCAGAGAGGGTTACATACCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGTTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGGGTGCTGCTGAGCCCTaGGTCTTTTTCTATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLQAWLTWRVQEESVYLGAAEP*VFFYFL Trigger: GAGAAAATAGAAAAAGACTCAGGGCTCAGCAGCACC...CAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAACTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGTCCTCTGCTGAACAAAAGGAATaGGGCTTTGCAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQAWLTWRVQEESVYLSSAEQKE*GFATAS Trigger: AGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGC...AGAGGACAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTGGGAAAAGGAGTCAAGTGGGAAACTCGAGAGTAGTCCTGTGGTAGAGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISWEKESSGKLESSPVVESLGGS*TKGMRL Trigger: AAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGA...CTCTACCACAGGACTACTCTCGAGTTTCCCACTTGACTCCTTTTCCCAAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAACCTTGGTGACAAAACGAGTCAAGAGAAGCCTGAGTTTCACAAAACGCATGAGGCTTTGCAACTaGTTCTGGCCAAACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPTLVTKRVKRSLSFTKRMRLCN*FWPNTD Trigger: GTCTGTGTTTGGCCAGAAGCAGTTGCAAAGCCTCAT...GCGTTTTGTGAAACTCAGGCTTCTCTTGACTCGTTTTGTCACCAAGGTTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCGTGACTTTAATCCTAGAATTCAGGAGGCAGAGGCAGGGGAATATGAGTTGCTGTGCTCTTCAGTaGAGGAGAGTTATCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLVTLILEFRRQRQGNMSCCALQ*RRVILL Trigger: AAGCAAGATAACTCTCCTTCACTGAAGAGCACAGCA...ACTCATATTCCCCTGCCTCTGCCTCCTGAATTCTAGGATTAAAGTCACGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTGCATTAGGCAAGCAAGATGCAAAGAAATCCTGGGGTGGAAAGAAATCTCTTAGAGACCTTTGCTaGGTCACAGGGCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PTALGKQDAKKSWGGKKSLRDLC*VTGPLI Trigger: AATCAGAGGCCCTGTGACCCAGCAAAGGTCTCTAAG...AGATTTCTTTCCACCCCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CCTACTGCATTAGGCAAGCAAGATGCAAAGAAATCCTGGGGTGGAAAGAAATCTTACGCCTGTAAGACCTaGACCATTTTGGCATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTALGKQDAKKSWGGKKSYACKT*TILAYS Trigger: GGAGTATGCCAAAATGGTGCAGGTCTTACAGGCGTA...AGATTTCTTTCCACCCCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGTCCTCTCTAGAGGTAGAGCTTTaGATTGATATCCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQAWLTWRVQEESVYLSSLEVEL*IDIHGL Trigger: AAGACCATGGATATCAATGCAAAGCTCTACCTCTAG...AGAGGACAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAAGAAGGGAACTGGCCCAGGTCTTTACGTTGTTGCTATACACACAGGACATCTTTGAGAAATGTTaGCATTTGAGGGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRRELAQVFTLLLYTQDIFEKC*HLRVFP Trigger: AGGAAAGACCCTCAAATGTCAACATTTCTCAAAGAT...GTCCTGTGTGTATAGCAACAACGTAAAGACCTGGGCCAGTTCCCTTCTTAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAACCTTGGTGACAAAACGAGTCAAGAGAAGCCTGAGTTTCACAAAACGCAGTTCATCTATATCTTaGGGTCCAAAGGTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPTLVTKRVKRSLSFTKRSSSIS*GPKVQF Trigger: AAACTGGACCTTTGGACCCCAAGATATAGATGAACT...GCGTTTTGTGAAACTCAGGCTTCTCTTGACTCGTTTTGTCACCAAGGTTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| 3UTR CAA 72 bp | TGGGTGGGTGAGAAAACAAATAGAATTCAATCGCCATaGAGGGCTCAAAGTCAAAAGTTGCCACACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: WVGEKTNRIQSP*RAQSQKLPHTH Trigger: GTGTGTGTGTGGCAACTTTTGACTTTGAGCCCTCAATGGCGATTGAATTCTATTTGTTTTCTCACCCACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | GTATATACTAAAGCCAGAGTTACAACAATTTCTTGGGAAAAGGAGTCAAGTGGGCGATATTTTCCTTCATaGCAGAGCTGCCGCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYTKARVTTISWEKESSGRYFPS*QSCRLC Trigger: GCACAAGCGGCAGCTCTGGCATGAAGGAAAATATCG...CCCACTTGACTCCTTTTCCCAAGAAATTGTTGTAACTCTGGCTTTAGTATATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCAAAGTCAAAAGTTGCCACACACACACACACACACACACACACACACACAGACATTAAGCTTGTTTaGATCACTGTCAAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKSKVATHTHTHTHTHTDIKLV*ITVKHS Trigger: GGAATGTTTGACAGTGATGCAAACAAGCTTAATGTC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAACTTTTGACTTTGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCAAAGTCAAAAGTTGCCACACACACACACACACACACACACACACACACATCTTATTCATTTTTATaGCTACATCGACCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKSKVATHTHTHTHTHTSYSFL*LHRPQL Trigger: CAGCTGAGGTCGATGTAGCCATAAAAATGAATAAGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAACTTTTGACTTTGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR TCA 90 bp | CCTACTGCATTAGGCAAGCAAGATGCAAAGAAATCCTGGGGTGGAAAGAAATCTAGAAATGTTGACATTTaGGGGTCTTTCCTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTALGKQDAKKSWGGKKSRNVDI*GSFLCL Trigger: AAGACAGAGGAAAGACCCTCAAATGTCAACATTTCT...AGATTTCTTTCCACCCCAGGATTTCTTTGCATCTTGCTTGCCTAATGCAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCTCTAGTTCTGCAGTATaGAGCTTTACTAAGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QAALHSQLEQPFTLGFLVSSSAV*SFTKLP Trigger: AGGTAACTTAGTAAAGCTGCATACTGCAGAACTAGA...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
||
| CDS-3UTR GCA 90 bp | GTATATACTAAAGCCAGAGTTACAACAATTTCTTGGGAAAAGGAGTCAAGTGGGCAAGATCTCCATCTCTaGAAACATCGATTTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VYTKARVTTISWEKESSGQDLHL*KHRFTN Trigger: ATTAGTAAATCGATGTTTGCAGAGATGGAGATCTTG...CCCACTTGACTCCTTTTCCCAAGAAATTGTTGTAACTCTGGCTTTAGTATATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS TCA 90 bp | CTGCCGCTTGTGCACACCACAGGCTGCCGCTTCCCCTGTCCGAGCTaGTTAGTGCAGCTTACACGGACGCCTGCTGAGATGATACAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LPLVHTTGCRFPCPS*LVQLTRTPAEMIQY Trigger: GTACTGTATCATCTCAGCAGGCGTCCGTGTAAGCTGCACTAATCAGCTCGGACAGGGGAAGCGGCAGCCTGTGGTGTGCACAAGCGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGTCCTCTTGCCAGAGCTGCCGCTaGTGCACACCACAGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LQAWLTWRVQEESVYLSSCQSCR*CTPQAA Trigger: GGCAGCCTGTGGTGTGCACAAGCGGCAGCTCTGGCA...AGAGGACAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 90 bp | TTTGCAACTGCTTCTGGCCAAACACAGACCCGATATTTTCCTTCATaGCAGAGCTGCCGCTTGTGCACACCACAGGCTGCCGCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: FATASGQTQTRYFPS*QSCRLCTPQAAASP Trigger: AGGGGAAGCGGCAGCCTGTGGTGTGCACAAGCGGCAGCTCTGGCATGAAGGAAAATATCGGGTCTGTGTTTGGCCAGAAGCAGTTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS TCA 90 bp | GTGCTCAGGCCGTACTCTTCACACACAGCGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTTTGCAACTGCTTCTGGCCAAACACA | + |
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Preference number: 5 (lower is better) Translates to: VLRPYSSHTASLGGS*TKGMRLCNCFWPNT Trigger: TGTGTTTGGCCAGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGACGCTGTGTGTGAAGAGTACGGCCTGAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | CTCAAAGTCCTGGGCTCACATGAGCCTCCCACCGGGATCTCCCAAGTAGCTGAGCAGTTCATCTATATCTaGGGGTCCAAAGGTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LKVLGSHEPPTGISQVAEQFIYI*GSKGPV Trigger: AACTGGACCTTTGGACCCCAAGATATAGATGAACTG...CTCAGCTACTTGGGAGATCCCGGTGGGAGGCTCATGTGAGCCCAGGACTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS TCA 90 bp | ACCTCATTGACAAGCTTAGAGACCTTTGCTGGGTCACAGGGCCTCTaGTTGATGAAGAAAAACTGCCTGTCTGTTGCACTCCTCCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: TSLTSLETFAGSQGL*LMKKNCLSVALLPA Trigger: CGCCGGGAGGAGTGCAACAGACAGGCAGTTTTTCTTCATCAATCAGAGGCCCTGTGACCCAGCAAAGGTCTCTAAGCTTGTCAATGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 90 bp | CCTCTCTCAGCCTGGAGATGGATGCTACCCTTTTCTCGTCTGCTGTaGTCTTCAGTGAAGGAGAGTTATCTTGCTTTCCTGGCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PLSAWRWMLPFSRLL*SSVKESYLAFLAQA Trigger: AGCCTGTGCCAGGAAAGCAAGATAACTCTCCTTCACTGAAGAGCACAGCAGACGAGAAAAGGGTAGCATCCATCTCCAGGCTGAGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CCA 90 bp | CTTTTTCTATTTTCTCTCTGTCCATACAGTCACCAGGGCTGTCCGTaGGACTCACCAATTTGTCCTGCGAGCCACGGAGGCCTCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: LFLFSLCPYSHQGCP*DSPICPASHGGLCK Trigger: CTTACAGAGGCCTCCGTGGCTCGCAGGACAAATTGGTGAGTCCCACGGACAGCCCTGGTGACTGTATGGACAGAGAGAAAATAGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTGGGAAAAGGAGTCAAGTGGGAAACTCGAGAGTAGTCCTGTGGTAGAGAAAACTGCCTGTCTGTaGCACTCCTCCCGGCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: ISWEKESSGKLESSPVVEKTACL*HSSRRR Trigger: ACGGCGCCGGGAGGAGTGCAACAGACAGGCAGTTTT...CTCTACCACAGGACTACTCTCGAGTTTCCCACTTGACTCCTTTTCCCAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | TTTTGGTATGTAACCCTCTCTGGCCTGGGACTATGGAGCAGCCCAGGATGGCCTAGCAGTGGCTGCTGGTaGACATTAAGCTTGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: FWYVTLSGLGLWSSPGWPSSGCW*TLSLFA Trigger: TGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCT...AGGCCATCCTGGGCTGCTCCATAGTCCCAGGCCAGAGAGGGTTACATACCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS CCA 90 bp | GCATTGATATCCATGGTCTTCTGGCTTCAAGGACTGTCCTGTACCTaGAGGACGGCAGTCCAAGTCACCACAGTTTATGGTTTCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ALISMVFWLQGLSCT*RTAVQVTTVYGFLR Trigger: TCTCAGGAAACCATAAACTGTGGTGACTTGGACTGCCGTCCTCCAGGTACAGGACAGTCCTTGAAGCCAGAAGACCATGGATATCAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGGCCTGGCTTACTTGGAGGGTTCAGGAAGAGTCAGTATACTTGTCCTCTGGTCTTTCCTCTGTCTaGAAGCGCTTGGCATTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LQAWLTWRVQEESVYLSSGLSSV*KRLAFV Trigger: CACAAATGCCAAGCGCTTCAAGACAGAGGAAAGACC...AGAGGACAAGTATACTGACTCTTCCTGAACCCTCCAAGTAAGCCAGGCCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS CCA 90 bp | AACTCAGAGAGAACTCGAGGAGCACGATTCTCTTATTCATTTTTATaGCTACATCGACCTCAGCTGCTGAGGTGCTCTGAGGACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSERTRGARFSYSFL*LHRPQLLRCSEDQA Trigger: TGCCTGGTCCTCAGAGCACCTCAGCAGCTGAGGTCGATGTAGCCATAAAAATGAATAAGAGAATCGTGCTCCTCGAGTTCTCTCTGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAACCTTGGTGACAAAACGAGTCAAGAGAAGCCTGAGTTTCACAAAACGCGAGATGACATCCAGATaGGCAACGTGCCTCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RPTLVTKRVKRSLSFTKREMTSR*ATCLMV Trigger: AACCATGAGGCACGTTGCCAATCTGGATGTCATCTC...GCGTTTTGTGAAACTCAGGCTTCTCTTGACTCGTTTTGTCACCAAGGTTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS-3UTR CAA 90 bp | TGCCGCCTGGACTTCACAGGAGGCATTGTAATTTCTATCTCTCACACAGTTCCATCTGTCTTGAAGCGCTaGGCATTTGTGGGTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CRLDFTGGIVISISHTVPSVLKR*AFVGDR Trigger: TCTGTCACCCACAAATGCCAAGCGCTTCAAGACAGA...TGGAACTGTGTGAGAGATAGAAATTACAATGCCTCCTGTGAAGTCCAGGCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS CCA 90 bp | CAAGATCTCCATCTCTGCAAACATCGATTTATAGAAAAGGTTTTGTaGCGTCCTGGAAGTGCTCAGGCCGTACTCTTCACACACAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QDLHLCKHRFIEKVL*RPGSAQAVLFTHSV Trigger: GACGCTGTGTGTGAAGAGTACGGCCTGAGCACTTCCAGGACGCCACAAAACCTTTTCTATAAATCGATGTTTGCAGAGATGGAGATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110709.7 |
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| CDS GCA 90 bp | CCGGTTATACATGTGATAAACCTCATTGACAAGCTTAGAGACCTTTaGTGGGTCACAGGGCCTCTGATTGATGAAGAAAAACTGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVIHVINLIDKLRDL*WVTGPLIDEEKLPV Trigger: GACAGGCAGTTTTTCTTCATCAATCAGAGGCCCTGTGACCCAGCAAAGGTCTCTAAGCTTGTCAATGAGGTTTATCACATGTATAACCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 90 bp | GAGTTATCTTGCTTTCCTGGCACAGGCTTTTCTAGTTCTGCAGTATaGAGCTTTACTAAGTTACCTTCAACATCTAGCAGTGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELSCFPGTGFSSSAV*SFTKLPSTSSSGCW Trigger: CCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAAGCTGCATACTGCAGAACTAGAAAAGCCTGTGCCAGGAAAGCAAGATAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CCA 90 bp | GTTATACATGTGATAAACCTCATTGACAAGCTTAGAGACCTTTGCTaGGTCACAGGGCCTCTGATTGATGAAGAAAAACTGCCTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VIHVINLIDKLRDLC*VTGPLIDEEKLPVC Trigger: ACAGACAGGCAGTTTTTCTTCATCAATCAGAGGCCCTGTGACCCAGCAAAGGTCTCTAAGCTTGTCAATGAGGTTTATCACATGTATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 90 bp | GCAGTATGCAGCTTTACTAAGTTACCTTCAACATCTAGCAGTGGCTaGTGGTTGACATTAAGCTTGTTTGCATCACTGTCAAACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVCSFTKLPSTSSSG*WLTLSLFASLSNIP Trigger: AGGAATGTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAAGCTGCATACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTCTCCACTCTCAACTTGAACAACCATTTACTCTAGGTTTTCTGGTCTGGTTGACATTAAGCTaGTTTGCATCACTGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QAALHSQLEQPFTLGFLVWLTLS*FASLSN Trigger: GTTTGACAGTGATGCAAACAAGCTTAATGTCAACCA...GACCAGAAAACCTAGAGTAAATGGTTGTTCAAGTTGAGAGTGGAGAGCAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS CCA 90 bp | GTATGCAGCTTTACTAAGTTACCTTCAACATCTAGCAGTGGCTGCTaGTTGACATTAAGCTTGTTTGCATCACTGTCAAACATTCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: VCSFTKLPSTSSSGC*LTLSLFASLSNIPI Trigger: GATAGGAATGTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAAGCTGCATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS-3UTR CAA 90 bp | GTATATACTAAAGCCAGAGTTACAACAATTTCTTGGGAAAAGGAGTCAAGTGGGAAAAGGAATGAGGCTTaGCAACTGCTTCTGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VYTKARVTTISWEKESSGKRNEA*QLLLAK Trigger: TTTGGCCAGAAGCAGTTGCAAAGCCTCATTCCTTTT...CCCACTTGACTCCTTTTCCCAAGAAATTGTTGTAACTCTGGCTTTAGTATATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS TCA 72 bp | GTGCACACCACAGGCTGCCGCTTCCCCTGTCCGAGCTaGTTAGTGCAGCTTACACGGACGCCTGCTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VHTTGCRFPCPS*LVQLTRTPAEM Trigger: CATCTCAGCAGGCGTCCGTGTAAGCTGCACTAATCAGCTCGGACAGGGGAAGCGGCAGCCTGTGGTGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS CAA 72 bp | CAGACCCGATATTTTCCTTCATGCCAGAGCTGCCGCTaGTGCACACCACAGGCTGCCGCTTCCCCTGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: QTRYFPSCQSCR*CTPQAAASPVR Trigger: TCGGACAGGGGAAGCGGCAGCCTGTGGTGTGCACAAGCGGCAGCTCTGGCATGAAGGAAAATATCGGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS GCA 72 bp | GCTTCTGGCCAAACACAGACCCGATATTTTCCTTCATaGCAGAGCTGCCGCTTGTGCACACCACAGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASGQTQTRYFPS*QSCRLCTPQAA Trigger: GGCAGCCTGTGGTGTGCACAAGCGGCAGCTCTGGCATGAAGGAAAATATCGGGTCTGTGTTTGGCCAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS CCA 72 bp | TTTTCTCTCTGTCCATACAGTCACCAGGGCTGTCCGTaGGACTCACCAATTTGTCCTGCGAGCCACGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSLCPYSHQGCP*DSPICPASHGG Trigger: GCCTCCGTGGCTCGCAGGACAAATTGGTGAGTCCCACGGACAGCCCTGGTGACTGTATGGACAGAGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS TCA 72 bp | CCGTACTCTTCACACACAGCGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTTTGCAACTGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PYSSHTASLGGS*TKGMRLCNCFW Trigger: CCAGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGACGCTGTGTGTGAAGAGTACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS CCA 72 bp | TACCTGGAGGACGGCAGTCCAAGTCACCACAGTTTATaGTTTCCTGAGAAGGTCTGTCTTCTGGGGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: YLEDGSPSHHSL*FPEKVCLLGSS Trigger: TGAGCTCCCCAGAAGACAGACCTTCTCAGGAAACCATAAACTGTGGTGACTTGGACTGCCGTCCTCCAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 72 bp | GCCTGGAGATGGATGCTACCCTTTTCTCGTCTGCTGTaGTCTTCAGTGAAGGAGAGTTATCTTGCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWRWMLPFSRLL*SSVKESYLAFL Trigger: CAGGAAAGCAAGATAACTCTCCTTCACTGAAGAGCACAGCAGACGAGAAAAGGGTAGCATCCATCTCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CAA 72 bp | TTGACATTTGAGGGTCTTTCCTCTGTCTTGAAGCGCTaGGCATTTGTGGGTGACAGACGAGCTAGAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTFEGLSSVLKR*AFVGDRRARGR Trigger: TCTACCTCTAGCTCGTCTGTCACCCACAAATGCCAAGCGCTTCAAGACAGAGGAAAGACCCTCAAATGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 72 bp | TCGTCTGCTGTGCTCTTCAGTGAAGGAGAGTTATCTTaGTTTCCTGGCACAGGCTTTTCTAGTTCTGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSAVLFSEGELS*FPGTGFSSSAV Trigger: TACTGCAGAACTAGAAAAGCCTGTGCCAGGAAAGCAAGATAACTCTCCTTCACTGAAGAGCACAGCAGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS GCA 72 bp | CATTTGTGGGTGACAGACGAGCTAGAGGTAGAGCTTTaGATTGATATCCATGGTCTTCTGGCTTCAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: HLWVTDELEVEL*IDIHGLLASRT Trigger: AGTCCTTGAAGCCAGAAGACCATGGATATCAATGCAAAGCTCTACCTCTAGCTCGTCTGTCACCCACAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS CCA 72 bp | AGAACTCGAGGAGCACGATTCTCTTATTCATTTTTATaGCTACATCGACCTCAGCTGCTGAGGTGCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTRGARFSYSFL*LHRPQLLRCSE Trigger: CTCAGAGCACCTCAGCAGCTGAGGTCGATGTAGCCATAAAAATGAATAAGAGAATCGTGCTCCTCGAGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 72 bp | ACGCCTGCTGAGATGATACAGTACGCCTGTAAGACCTaGACCATTTTGGCATACTCCTTTTTAATGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPAEMIQYACKT*TILAYSFLMFL Trigger: GAGGAACATTAAAAAGGAGTATGCCAAAATGGTGCAGGTCTTACAGGCGTACTGTATCATCTCAGCAGGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110709.7 ENSMUST00000148011.8 |
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| CDS TCA 72 bp | CTTATTCATTTTTATGGCTACATCGACCTCAGCTGCTaGGGTGCTCTGAGGACCAGGCAATCTTTGAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LIHFYGYIDLSC*GALRTRQSLRN Trigger: ATTTCTCAAAGATTGCCTGGTCCTCAGAGCACCTCAGCAGCTGAGGTCGATGTAGCCATAAAAATGAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148011.8 |
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| CDS GCA 72 bp | TGCTTTCCTGGCACAGGCTTTTCTAGTTCTGCAGTATaGAGCTTTACTAAGTTACCTTCAACATCTAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CFPGTGFSSSAV*SFTKLPSTSSS Trigger: ACTGCTAGATGTTGAAGGTAACTTAGTAAAGCTGCATACTGCAGAACTAGAAAAGCCTGTGCCAGGAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS GCA 72 bp | AGCTTTACTAAGTTACCTTCAACATCTAGCAGTGGCTaGTGGTTGACATTAAGCTTGTTTGCATCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFTKLPSTSSSG*WLTLSLFASLS Trigger: TGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CAA 90 bp | TGCAGCTTTACTAAGTTACCTTCAACATCTAGCAGTGGCTGCTGGTaGACATTAAGCTTGTTTGCATCACTGTCAAACATTCCTATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSFTKLPSTSSSGCW*TLSLFASLSNIPIK Trigger: CTTGATAGGAATGTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAAGCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CAA 90 bp | AAGTTACCTTCAACATCTAGCAGTGGCTGCTGGTTGACATTAAGCTaGTTTGCATCACTGTCAAACATTCCTATCAAGGAGGTCTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KLPSTSSSGCWLTLS*FASLSNIPIKEVFK Trigger: TTTAAAGACCTCCTTGATAGGAATGTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CCA 72 bp | TTTACTAAGTTACCTTCAACATCTAGCAGTGGCTGCTaGTTGACATTAAGCTTGTTTGCATCACTGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FTKLPSTSSSGC*LTLSLFASLSN Trigger: GTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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| CDS CAA 72 bp | ACTAAGTTACCTTCAACATCTAGCAGTGGCTGCTGGTaGACATTAAGCTTGTTTGCATCACTGTCAAACATT | + |
|
Preference number: 6 (lower is better) Translates to: TKLPSTSSSGCW*TLSLFASLSNI Trigger: AATGTTTGACAGTGATGCAAACAAGCTTAATGTCAACCAGCAGCCACTGCTAGATGTTGAAGGTAACTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148011.8 ENSMUST00000164999.2 |
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