Pregenerated sensors for PMPCB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029017Ensembl transcript IDs: ENSMUST00000030882.12
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGCCTGTGTGCTTCTTAGTCGGTCCCCTCCAAAGTACAACGGCTaGGCAGCGGCGCGGCGAAGCGGAAGCCTTCGTGTAAATCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: AACVLLSRSPPKYNG*AAARRSGSLRVNPH Trigger: GTGGGGATTTACACGAAGGCTTCCGCTTCGCCGCGCCGCTGCTCAGCCGTTGTACTTTGGAGGGGACCGACTAAGAAGCACACAGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | GTGTCTGGATGGGCCCAACCAACTGCTTCAACAGCTATTGCAAGGTaGGCCAATGGCATCTTGTCATCCCTCACCCGAATCTCACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VSGWAQPTASTAIAR*ANGILSSLTRISLP Trigger: TGGAAGTGAGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | ACAGATCGTGTCTGGATGGGCCCAACCAACTGCTTCAACAGCTATTaGAAGGTGCGCCAATGGCATCTTGTCATCCCTCACCCGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: TDRVWMGPTNCFNSY*KVRQWHLVIPHPNL Trigger: GAGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | GTTTGCGACCATGAGACAGATCGTGTCTGGATGGGCCCAACCAACTaGTTCAACAGCTATTGCAAGGTGCGCCAATGGCATCTTGTCATC | + |
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Preference number: 5 (lower is better) Translates to: VCDHETDRVWMGPTN*FNSYCKVRQWHLVI Trigger: GATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | CATTCCTCCTCCAAAAGAGCGATCCCAGTTGCCTATCAATGTGTTTaGGACCATGAGACAGATCGTGTCTGGATGGGCCCAACCAACTGC | + |
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Preference number: 5 (lower is better) Translates to: HSSSKRAIPVAYQCV*DHETDRVWMGPTNC Trigger: GCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCTCTTTTGGAGGAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | CCAGTTGCCTATCAATGTGTTTGCGACCATGAGACAGATCGTGTCTaGATGGGCCCAACCAACTGCTTCAACAGCTATTGCAAGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: PVAYQCVCDHETDRV*MGPTNCFNSYCKVR Trigger: GCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 90 bp | CTCATAGCGACTTCCCGCATCGATCCACAGCCCAACTGTGCACGTTaGGAGCCCAGAGTTTTCAGAAGCTACTCTGAGTCCATTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LIATSRIDPQPNCAR*EPRVFRSYSESIFQ Trigger: TTGGAAAATGGACTCAGAGTAGCTTCTGAAAACTCTGGGCTCTCAACGTGCACAGTTGGGCTGTGGATCGATGCGGGAAGTCGCTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 90 bp | CTCCAAAAGAGCGATCCCAGTTGCCTATCAATGTGTTTGCGACCATaGGACAGATCGTGTCTGGATGGGCCCAACCAACTGCTTCAACAG | + |
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Preference number: 5 (lower is better) Translates to: LQKSDPSCLSMCLRP*DRSCLDGPNQLLQQ Trigger: CTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCTCTTTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | ATGGGCCCAACCAACTGCTTCAACAGCTATTGCAAGGTGCGCCAATaGCATCTTGTCATCCCTCACCCGAATCTCACTTCCAGTGAACTT | + |
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Preference number: 5 (lower is better) Translates to: MGPTNCFNSYCKVRQ*HLVIPHPNLTSSEL Trigger: AAGTTCACTGGAAGTGAGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | TTGCCTATCAATGTGTTTGCGACCATGAGACAGATCGTGTCTGGATaGGCCCAACCAACTGCTTCAACAGCTATTGCAAGGTGCGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: LPINVFATMRQIVSG*AQPTASTAIARCAN Trigger: ATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 90 bp | ACTCCCCGCTCACGCTCAATCTCTGCTTCTCCCAGTGTGCTGTTCTaGATTATGTCAGCAAGAATTTCTACAGCTCTGGGCAAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TPRSRSISASPSVLF*IMSARISTALGKSL Trigger: GAGAGATTTGCCCAGAGCTGTAGAAATTCTTGCTGACATAATTCAGAACAGCACACTGGGAGAAGCAGAGATTGAGCGTGAGCGGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | TCAGGATTACTCCCCGCTCACGCTCAATCTCTGCTTCTCCCAGTGTaGTGTTCTGAATTATGTCAGCAAGAATTTCTACAGCTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGLLPAHAQSLLLPV*CSELCQQEFLQLWA Trigger: TGCCCAGAGCTGTAGAAATTCTTGCTGACATAATTCAGAACAGCACACTGGGAGAAGCAGAGATTGAGCGTGAGCGGGGAGTAATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | AAAGAGTCACCAAAATGGAACTTTGCTAACTCCAGCAGTTCGTTATaGCAAACACCTCCGGCGGCAGCCAGTACAATTCTTGGTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KESPKWNFANSSSSL*QTPPAAASTILGPL Trigger: CAAGGGACCAAGAATTGTACTGGCTGCCGCCGGAGGTGTTTGCCATAACGAACTGCTGGAGTTAGCAAAGTTCCATTTTGGTGACTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | TTGAAGGACTGGAAGCTGTGGCAGAGATTGCCATGGCAAGTGAGTTaGGCCAGCTTGCTAGATAAATTCATTCCTCCTCCAAAAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LKDWKLWQRLPWQVS*ASLLDKFIPPPKER Trigger: TCGCTCTTTTGGAGGAGGAATGAATTTATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | GACGCTTCCATTCGTTTTGTACAACGTGCAGCATGTCAGCAACCGTaGCTTGTTCACAGACCATATAGAGTCCCCATAATCCTGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: DASIRFVQRAACQQP*LVHRPYRVPIILCL Trigger: CAGACACAGGATTATGGGGACTCTATATGGTCTGTGAACAAGCCACGGTTGCTGACATGCTGCACGTTGTACAAAACGAATGGAAGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 90 bp | TATGTCAGCAAGAATTTCTACAGCTCTGGGCAAATCTCTCGAGAATaGTTTGGCGTAGTAGACAGTCTGCTCTCTGGAGGTATAGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: YVSKNFYSSGQISRE*FGVVDSLLSGGIGV Trigger: AACGCCTATACCTCCAGAGAGCAGACTGTCTACTACGCCAAAGCATTCTCGAGAGATTTGCCCAGAGCTGTAGAAATTCTTGCTGACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | AGAGCTGGTATAGCTCCTTTGTGTGAGCACAAAGAGTCACCAAAATaGAACTTTGCTAACTCCAGCAGTTCGTTATGGCAAACACCTCCG | + |
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Preference number: 5 (lower is better) Translates to: RAGIAPLCEHKESPK*NFANSSSSLWQTPP Trigger: CGGAGGTGTTTGCCATAACGAACTGCTGGAGTTAGCAAAGTTCCATTTTGGTGACTCTTTGTGCTCACACAAAGGAGCTATACCAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | CATAATCCTGTGTCTGTATATGAAGTATTGAAGGACTGGAAGCTGTaGCAGAGATTGCCATGGCAAGTGAGTTGGGCCAGCTTGCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: HNPVSVYEVLKDWKL*QRLPWQVSWASLLD Trigger: ATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATACAGACACAGGATTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 90 bp | GTATATGAAGTATTGAAGGACTGGAAGCTGTGGCAGAGATTGCCATaGCAAGTGAGTTGGGCCAGCTTGCTAGATAAATTCATTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VYEVLKDWKLWQRLP*QVSWASLLDKFIPP Trigger: AGGAGGAATGAATTTATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | AGTTCAAGGTCTAACTGGGACCTCTTTTTAGTGCCCTaGAAGGCCATGTGCTCCAGGAAGTGGGCGGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SSRSNWDLFLVP*KAMCSRKWAVP Trigger: CGGCACCGCCCACTTCCTGGAGCACATGGCCTTCAAGGGCACTAAAAAGAGGTCCCAGTTAGACCTTGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | CATAGCGACTTCCCGCATCGATCCACAGCCCAACTGTaGACGTTGAGAGCCCAGAGTTTTCAGAAGCTACTC | + |
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Preference number: 6 (lower is better) Translates to: HSDFPHRSTAQL*TLRAQSFQKLL Trigger: GAGTAGCTTCTGAAAACTCTGGGCTCTCAACGTGCACAGTTGGGCTGTGGATCGATGCGGGAAGTCGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | TGGGCCCAACCAACTGCTTCAACAGCTATTGCAAGGTaGGCCAATGGCATCTTGTCATCCCTCACCCGAATC | + |
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Preference number: 6 (lower is better) Translates to: WAQPTASTAIAR*ANGILSSLTRI Trigger: GATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | GTCTGGATGGGCCCAACCAACTGCTTCAACAGCTATTaGAAGGTGCGCCAATGGCATCTTGTCATCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: VWMGPTNCFNSY*KVRQWHLVIPH Trigger: GTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | GACAGATCGTGTCTGGATGGGCCCAACCAACTGCTTCAACAGCTATaGCAAGGTGCGCCAATGGCATCTTGTCATCCCTCACCCGAATCT | + |
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Preference number: 6 (lower is better) Translates to: DRSCLDGPNQLLQQL*QGAPMASCHPSPES Trigger: AGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 72 bp | AGCGATCCCAGTTGCCTATCAATGTGTTTGCGACCATaGGACAGATCGTGTCTGGATGGGCCCAACCAACTG | + |
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Preference number: 6 (lower is better) Translates to: SDPSCLSMCLRP*DRSCLDGPNQL Trigger: CAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | CATGAGACAGATCGTGTCTGGATGGGCCCAACCAACTaGTTCAACAGCTATTGCAAGGTGCGCCAATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HETDRVWMGPTN*FNSYCKVRQWH Trigger: ATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | TCAATCTCAAGTTCAAGGTCTAACTGGGACCTCTTTTTAGTGCCCTaGAAGGCCATGTGCTCCAGGAAGTGGGCGGTGCCGTTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SISSSRSNWDLFLVP*KAMCSRKWAVPLFF Trigger: GAAGAACAACGGCACCGCCCACTTCCTGGAGCACATGGCCTTCAAGGGCACTAAAAAGAGGTCCCAGTTAGACCTTGAACTTGAGATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | CAACCAACTGCTTCAACAGCTATTGCAAGGTGCGCCAATGGCATCTaGTCATCCCTCACCCGAATCTCACTTCCAGTGAACTTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: QPTASTAIARCANGI*SSLTRISLPVNLQG Trigger: TCCCTGCAAGTTCACTGGAAGTGAGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | CTCTCTCAGGATTACTCCCCGCTCACGCTCAATCTCTaGTTCTCCCAGTGTGCTGTTCTGAATTATGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSQDYSPLTLNL*FSQCAVLNYVS Trigger: GCTGACATAATTCAGAACAGCACACTGGGAGAAGCAGAGATTGAGCGTGAGCGGGGAGTAATCCTGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | TCCAAAAGAGCGATCCCAGTTGCCTATCAATGTGTTTaGGACCATGAGACAGATCGTGTCTGGATGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SKRAIPVAYQCV*DHETDRVWMGP Trigger: TGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCTCTTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | ACCAACTGCTTCAACAGCTATTGCAAGGTGCGCCAATaGCATCTTGTCATCCCTCACCCGAATCTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: TNCFNSYCKVRQ*HLVIPHPNLTS Trigger: GGAAGTGAGATTCGGGTGAGGGATGACAAGATGCCATTGGCGCACCTTGCAATAGCTGTTGAAGCAGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | GCAGTTCGTTATGGCAAACACCTCCGGCGGCAGCCAGTACAATTCTaGGTCCCTTGTAGTGTGTGGTTATGTAATCCACTAGGTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: AVRYGKHLRRQPVQF*VPCSVWLCNPLGPY Trigger: GTAAGGACCTAGTGGATTACATAACCACACACTACAAGGGACCAAGAATTGTACTGGCTGCCGCCGGAGGTGTTTGCCATAACGAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | AATGTGTTTGCGACCATGAGACAGATCGTGTCTGGATaGGCCCAACCAACTGCTTCAACAGCTATTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: NVFATMRQIVSG*AQPTASTAIAR Trigger: CCTTGCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | TGGAAGCTGTGGCAGAGATTGCCATGGCAAGTGAGTTaGGCCAGCTTGCTAGATAAATTCATTCCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: WKLWQRLPWQVS*ASLLDKFIPPP Trigger: TGGAGGAGGAATGAATTTATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | GTGTCTGTATATGAAGTATTGAAGGACTGGAAGCTGTaGCAGAGATTGCCATGGCAAGTGAGTTGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSVYEVLKDWKL*QRLPWQVSWAS Trigger: GCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATACAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | CTCCCCGCTCACGCTCAATCTCTGCTTCTCCCAGTGTaGTGTTCTGAATTATGTCAGCAAGAATTTCTACAG | + |
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Preference number: 6 (lower is better) Translates to: LPAHAQSLLLPV*CSELCQQEFLQ Trigger: CTGTAGAAATTCTTGCTGACATAATTCAGAACAGCACACTGGGAGAAGCAGAGATTGAGCGTGAGCGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | GCGCCCATATTCTCAATCTCAAGTTCAAGGTCTAACTaGGACCTCTTTTTAGTGCCCTTGAAGGCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: APIFSISSSRSN*DLFLVPLKAMC Trigger: GCACATGGCCTTCAAGGGCACTAAAAAGAGGTCCCAGTTAGACCTTGAACTTGAGATTGAGAATATGGGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | TTTCTACAGCTCTGGGCAAATCTCTCGAGAATGCTTTaGCGTAGTAGACAGTCTGCTCTCTGGAGGTATAGG | + |
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Preference number: 6 (lower is better) Translates to: FLQLWANLSRML*RSRQSALWRYR Trigger: CCTATACCTCCAGAGAGCAGACTGTCTACTACGCCAAAGCATTCTCGAGAGATTTGCCCAGAGCTGTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | TATCAATGTGTTTGCGACCATGAGACAGATCGTGTCTaGATGGGCCCAACCAACTGCTTCAACAGCTATTGC | + |
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Preference number: 6 (lower is better) Translates to: YQCVCDHETDRV*MGPTNCFNSYC Trigger: GCAATAGCTGTTGAAGCAGTTGGTTGGGCCCATCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | GTATTGAAGGACTGGAAGCTGTGGCAGAGATTGCCATaGCAAGTGAGTTGGGCCAGCTTGCTAGATAAATTC | + |
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Preference number: 6 (lower is better) Translates to: VLKDWKLWQRLP*QVSWASLLDKF Trigger: GAATTTATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | TATGGCAAACACCTCCGGCGGCAGCCAGTACAATTCTaGGTCCCTTGTAGTGTGTGGTTATGTAATCCACTA | + |
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Preference number: 6 (lower is better) Translates to: YGKHLRRQPVQF*VPCSVWLCNPL Trigger: TAGTGGATTACATAACCACACACTACAAGGGACCAAGAATTGTACTGGCTGCCGCCGGAGGTGTTTGCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | TATGAAGTATTGAAGGACTGGAAGCTGTGGCAGAGATaGCCATGGCAAGTGAGTTGGGCCAGCTTGCTAGAT | + |
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Preference number: 6 (lower is better) Translates to: YEVLKDWKLWQR*PWQVSWASLLD Trigger: ATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 72 bp | TCACGCTCAATCTCTGCTTCTCCCAGTGTGCTGTTCTaGATTATGTCAGCAAGAATTTCTACAGCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRSISASPSVLF*IMSARISTALG Trigger: GCCCAGAGCTGTAGAAATTCTTGCTGACATAATTCAGAACAGCACACTGGGAGAAGCAGAGATTGAGCGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS TCA 72 bp | AGAGTCCCCATAATCCTGTGTCTGTATATGAAGTATTaGAGGACTGGAAGCTGTGGCAGAGATTGCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: RVPIILCLYMKY*RTGSCGRDCHG Trigger: GCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATACAGACACAGGATTATGGGGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | AAGAATTTCTACAGCTCTGGGCAAATCTCTCGAGAATaGTTTGGCGTAGTAGACAGTCTGCTCTCTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: KNFYSSGQISRE*FGVVDSLLSGG Trigger: ACCTCCAGAGAGCAGACTGTCTACTACGCCAAAGCATTCTCGAGAGATTTGCCCAGAGCTGTAGAAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | TCGTCGAACCGTCTCCGCATCCACAGCATCAATTCTTaGTTCAAGCTCGGGGATAGGAATTCTCCTATTATA | + |
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Preference number: 6 (lower is better) Translates to: SSNRLRIHSINS*FKLGDRNSPII Trigger: TATAATAGGAGAATTCCTATCCCCGAGCTTGAAGCAAGAATTGATGCTGTGGATGCGGAGACGGTTCGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | AGCTTGCTAGATAAATTCATTCCTCCTCCAAAAGAGCGATCCCAGTaGCCTATCAATGTGTTTGCGACCATGAGACAGATCGTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLLDKFIPPPKERSQ*PINVFATMRQIVSG Trigger: TCCAGACACGATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCTCTTTTGGAGGAGGAATGAATTTATCTAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | TCAAAAACAACTTCTTGCAAGTTGGTTTCAACTTCCTaGATCTCTCTCAGGATTACTCCCCGCTCACGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SKTTSCKLVSTS*ISLRITPRSRS Trigger: TGAGCGTGAGCGGGGAGTAATCCTGAGAGAGATGCAGGAAGTTGAAACCAACTTGCAAGAAGTTGTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | ATTCGTTTTGTACAACGTGCAGCATGTCAGCAACCGTaGCTTGTTCACAGACCATATAGAGTCCCCATAATC | + |
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Preference number: 6 (lower is better) Translates to: IRFVQRAACQQP*LVHRPYRVPII Trigger: GATTATGGGGACTCTATATGGTCTGTGAACAAGCCACGGTTGCTGACATGCTGCACGTTGTACAAAACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | GTGTCTGTATATGAAGTATTGAAGGACTGGAAGCTGTGGCAGAGATaGCCATGGCAAGTGAGTTGGGCCAGCTTGCTAGATAAATTCATT | + |
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Preference number: 6 (lower is better) Translates to: VSVYEVLKDWKLWQR*PWQVSWASLLDKFI Trigger: AATGAATTTATCTAGCAAGCTGGCCCAACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATACAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | CATAATCCTGTGTCTGTATATGAAGTATTGAAGGACTaGAAGCTGTGGCAGAGATTGCCATGGCAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: HNPVSVYEVLKD*KLWQRLPWQVS Trigger: ACTCACTTGCCATGGCAATCTCTGCCACAGCTTCCAGTCCTTCAATACTTCATATACAGACACAGGATTATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | GATAAATTCATTCCTCCTCCAAAAGAGCGATCCCAGTaGCCTATCAATGTGTTTGCGACCATGAGACAGATC | + |
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Preference number: 6 (lower is better) Translates to: DKFIPPPKERSQ*PINVFATMRQI Trigger: GATCTGTCTCATGGTCGCAAACACATTGATAGGCAACTGGGATCGCTCTTTTGGAGGAGGAATGAATTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CCA 72 bp | ATAGCTCCTTTGTGTGAGCACAAAGAGTCACCAAAATaGAACTTTGCTAACTCCAGCAGTTCGTTATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: IAPLCEHKESPK*NFANSSSSLWQ Trigger: TTGCCATAACGAACTGCTGGAGTTAGCAAAGTTCCATTTTGGTGACTCTTTGTGCTCACACAAAGGAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS GCA 72 bp | GATATTTTCAGTTGGTCCCAGAATTGTCCGTCCAAGTaGAGTATTTTGATAGGCTGTCGCATGAAGATAATC | + |
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Preference number: 6 (lower is better) Translates to: DIFSWSQNCPSK*SILIGCRMKII Trigger: GATTATCTTCATGCGACAGCCTATCAAAATACTGCACTTGGACGGACAATTCTGGGACCAACTGAAAATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | AGTTGGTCCCAGAATTGTCCGTCCAAGTGCAGTATTTaGATAGGCTGTCGCATGAAGATAATCAAAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: SWSQNCPSKCSI*IGCRMKIIKNN Trigger: GTTGTTTTTGATTATCTTCATGCGACAGCCTATCAAAATACTGCACTTGGACGGACAATTCTGGGACCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 72 bp | ATAGGCTGTCGCATGAAGATAATCAAAAACAACTTCTaGCAAGTTGGTTTCAACTTCCTGCATCTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: IGCRMKIIKNNF*QVGFNFLHLSQ Trigger: CTGAGAGAGATGCAGGAAGTTGAAACCAACTTGCAAGAAGTTGTTTTTGATTATCTTCATGCGACAGCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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| CDS CAA 90 bp | GATATTTTCAGTTGGTCCCAGAATTGTCCGTCCAAGTGCAGTATTTaGATAGGCTGTCGCATGAAGATAATCAAAAACAACTTCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: DIFSWSQNCPSKCSI*IGCRMKIIKNNFLQ Trigger: TTGCAAGAAGTTGTTTTTGATTATCTTCATGCGACAGCCTATCAAAATACTGCACTTGGACGGACAATTCTGGGACCAACTGAAAATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030882.12 |
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