Pregenerated sensors for PMPCA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026926Ensembl transcript IDs: ENSMUST00000076431.13, ENSMUST00000114093.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTCCTaGATGCTGGGATTAAAGGCGTGCACTACCACAGCCCAGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: DQAGLELGEPPASAS*MLGLKACTTTAQQF Trigger: AAACTGCTGGGCTGTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTaGCTCCTGAATGCTGGGATTAAAGGCGTGCACTACCACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTWRTTCF*LLNAGIKGVHYHSP Trigger: TGGGCTGTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 90 bp | GGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTaGTTCTGCCTCCTGAATGCTGGGATTAAAGGCGTGCACTACCAC | + |
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Preference number: 1 (lower is better) Translates to: GTLCRPGWPRTWRTT*FCLLNAGIKGVHYH Trigger: GTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 90 bp | CTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGACAGGCTaGCCTGGACTTCATAATCCTGCCTCAACTATTCCTGGCTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LQILLGRQPFLSQTG*PGLHNPASTIPGLN Trigger: ATTCAAGCCAGGAATAGTTGAGGCAGGATTATGAAGTCCAGGGCAGCCTGTCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CCA 90 bp | AGGATATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTaGAAGAAGTCTGCATGCATCTTGGGGCCTCAGGACACCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RIYSIVNSFWPKSEP*KKSACILGPQDTPG Trigger: CCCTGGGGTGTCCTGAGGCCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGAATATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 90 bp | TTTAGCACCTGGGAGGCAGAGGCAGGAGGGTCTCTGAGTTTGAGATaGGTATATCTTATATCAAGTCTCAAGCCACTCAGGGTTTTACTG | + |
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Preference number: 1 (lower is better) Translates to: FSTWEAEAGGSLSLR*VYLISSLKPLRVLL Trigger: CAGTAAAACCCTGAGTGGCTTGAGACTTGATATAAGATATACTCATCTCAAACTCAGAGACCCTCCTGCCTCTGCCTCCCAGGTGCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 90 bp | CAGGCTGCCCTGGACTTCATAATCCTGCCTCAACTATTCCTGGCTTaGATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: QAALDFIILPQLFLA*IRFDVVRVPDRFLC Trigger: ACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATAGTTGAGGCAGGATTATGAAGTCCAGGGCAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 90 bp | GAAAGGCCTGGGAAAAATCCCCGCATTATTGTCTGTCTTGTACAATaGTGCTTTAGCGCATGGCCATTCTGTAGGAACAACTCAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: ERPGKNPRIIVCLVQ*CFSAWPFCRNNSRE Trigger: CTCTCTTGAGTTGTTCCTACAGAATGGCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCCCAGGCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| 3UTR TCA 90 bp | ATAAATAAGGATATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTaGACCTTGGAAGAAGTCTGCATGCATCTTGGGGCCTCAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: INKDIFNCKLFLAKE*TLEEVCMHLGASGH Trigger: GTGTCCTGAGGCCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGAATATATCCTTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 90 bp | ATTAAAACTGGACTTGTAAATAATTGTGAGATACAACTGGCATGGTaGCTCTTACTAGAAAGACCAGTAACTGAGGCAAAGACAAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: IKTGLVNNCEIQLAW*LLLERPVTEAKTSS Trigger: TGAGCTTGTCTTTGCCTCAGTTACTGGTCTTTCTAGTAAGAGTCACCATGCCAGTTGTATCTCACAATTATTTACAAGTCCAGTTTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR GCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGTGGGTAGGCCCTGTGTaGTTTCAGAGTGTGGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: NSFWPKSEPWKKSACILGWVGPV*FQSVAL Trigger: AAGCGCCACACTCTGAAAGCACACAGGGCCTACCCA...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATATATAATTTTAGCACCTaGGAGGCAGAGGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: IPGLSARYCPCSQPEAAIYNFST*EAEAGG Trigger: CCCTCCTGCCTCTGCCTCCCAGGTGCTAAAATTATA...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR GCA 90 bp | CAACACAAACTTGGGTTCCAACATAAAATGGAGCCAAGAAAGGCCTGGGAAAAATCAAGAGAGGGACACTaGCCTCGGGGAGGCACTAGG | + |
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Preference number: 2 (lower is better) Translates to: QHKLGFQHKMEPRKAWEKSREGH*PRGGTR Trigger: CCTAGTGCCTCCCCGAGGGCAGTGTCCCTCTCTTGA...TTTTTCCCAGGCCTTTCTTGGCTCCATTTTATGTTGGAACCCAAGTTTGTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATAACACCAACAGTAACATaGACACAAGCACTCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: IPGLSARYCPCSQPEAAITPTVT*TQALYS Trigger: GCTGTAGAGTGCTTGTGTGCATGTTACTGTTGGTGT...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGCAGTGGTTCTACCAATaGGTAGGCCCTGTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NSFWPKSEPWKKSACILGQWFYQ*VGPVCF Trigger: AAAGCACACAGGGCCTACCCATTGGTAGAACCACTG...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CCA 90 bp | GGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTAGTGCAGATGAAGTaGGAAATTAAAACTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GTLCRPGWPRTWRTTCFCLVQMK*EIKTGL Trigger: AAGTCCAGTTTTAATTTCCCACTTCATCTGCACTAG...GCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR GCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGAGCCCAGCAGTTTGGTaGTTCTTTGTGGACATTCTC | + |
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Preference number: 2 (lower is better) Translates to: NSFWPKSEPWKKSACILGSPAVW*FFVDIL Trigger: GAGAATGTCCACAAAGAAGCACCAAACTGCTGGGCT...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATATTCAATAAACCACTGTaGACTGCAAATTCTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: IPGLSARYCPCSQPEAAIFNKPL*TANSTG Trigger: CCCAGTAGAATTTGCAGTTCACAGTGGTTTATTGAA...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CAA 90 bp | GCAGTGGCAACAGTAACTTTCATTCAAGTTTCCAGAGTTTCACTGTaGGCACTGTTCACACAGCTAGCTAGCCTTATGCAGTGTCTACAC | + |
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Preference number: 2 (lower is better) Translates to: AVATVTFIQVSRVSL*ALFTQLASLMQCLH Trigger: GTGTAGACACTGCATAAGGCTAGCTAGCTGTGTGAACAGTGCCAACAGTGAAACTCTGGAAACTTGAATGAAAGTTACTGTTGCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGAGACAGCACCTGCTTTaGCAGATACTCAGGAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NSFWPKSEPWKKSACILGRQHLL*QILRKN Trigger: ATTTTTCCTGAGTATCTGCCAAAGCAGGTGCTGTCT...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR TCA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCAACTATTCCTGGCTTaGATAAGGTTTGATGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSQLFLA*IRFDVV Trigger: TACCACATCAAACCTTATTCAAGCCAGGAATAGTTG...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CCA 72 bp | CCTGGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTaGAGAACCACCTGCTTCTGCCTCCTGAATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PGTLCRPGWPRT*RTTCFCLLNAG Trigger: CCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | GGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTCCTaGATGCTGGGATTAAAGGCGTGCACTACCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: GLELGEPPASAS*MLGLKACTTTA Trigger: GGCTGTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTaGCTCCTGAATGCTGGGATTAAAGGCGTGCACTAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTWRTTCF*LLNAGIKGVHY Trigger: GTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTaGTTCTGCCTCCTGAATGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTWRTT*FCLLNAGIKGV Trigger: CACGCCTTTAATCCCAGCATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 72 bp | TTATGCCAGTGGTTCTACCAATGGGTAGGCCCTGTGTaGTTTCAGAGTGTGGCGCTTTGTCTCCCTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LCQWFYQWVGPV*FQSVALCLPRV Trigger: GACTCTAGGGAGACAAAGCGCCACACTCTGAAAGCACACAGGGCCTACCCATTGGTAGAACCACTGGCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | ACTGGCATGGTGACTCTTACTAGAAAGACCAGTAACTaGGGCAAAGACAAGCTCACTGTGAGGCCAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TGMVTLTRKTSN*GKDKLTVRPAR Trigger: CCTGGCTGGCCTCACAGTGAGCTTGTCTTTGCCTCAGTTACTGGTCTTTCTAGTAAGAGTCACCATGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATACTGGAACTTCCCAGTTaGGCCCAAGATCAAGATCAT | + |
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Preference number: 3 (lower is better) Translates to: IPGLSARYCPCSQPEAAILELPS*AQDQDH Trigger: ATGATCTTGATCTTGGGCCAAACTGGGAAGTTCCAG...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CAA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGCCACAGCCCAGCAGTTaGGTGCTTCTTTGTGGACAT | + |
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Preference number: 3 (lower is better) Translates to: NSFWPKSEPWKKSACILGPQPSS*VLLCGH Trigger: ATGTCCACAAAGAAGCACCAAACTGCTGGGCTGTGG...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | TTAATCCCAGTAGTTGGGAAGCCAATCAGGTGGCTCTaGGTTCAAGACCAGCCTGGTCTACAGAGCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LIPVVGKPIRWL*VQDQPGLQSKF Trigger: GAACTTGCTCTGTAGACCAGGCTGGTCTTGAACTCAGAGCCACCTGATTGGCTTCCCAACTACTGGGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| 3UTR GCA 72 bp | AAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTaGTACTCAGTCCCATCCCAGGTCTTTCTGCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: KSKAKHLVSAVT*YSVPSQVFLLG Trigger: ACCTAGCAGAAAGACCTGGGATGGGACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CAA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGCTTTCCCAGCCTTCCTaGCTCCAGAAACATCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: NSFWPKSEPWKKSACILGLSQPS*LQKHLV Trigger: CACTAGATGTTTCTGGAGCAAGGAAGGCTGGGAAAG...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | CTGCTCACAGCCAGAAGCAGCAATAGCTGGAAAAAGTaGCGACTTGGGACTCCAGTGAACCATAATAAACCA | + |
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Preference number: 3 (lower is better) Translates to: LLTARSSNSWKK*RLGTPVNHNKP Trigger: TGGTTTATTATGGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAGCTATTGCTGCTTCTGGCTGTGAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR GCA 72 bp | ATTAAAGGCGTGCACTACCACAGCCCAGCAGTTTGGTaGTTCTTTGTGGACATTCTCTGGCACCTTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: IKGVHYHSPAVW*FFVDILWHLRK Trigger: TTTTCTAAGGTGCCAGAGAATGTCCACAAAGAAGCACCAAACTGCTGGGCTGTGGTAGTGCACGCCTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CCA 72 bp | TCAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTaGAAGAAGTCTGCATGCATCTTGGGGCCTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SIVNSFWPKSEP*KKSACILGPQD Trigger: GTCCTGAGGCCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CCA 72 bp | AAAAATGAGTACAATTTATGCCAGTGGTTCTACCAATaGGTAGGCCCTGTGTGCTTTCAGAGTGTGGCGCTT | + |
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Preference number: 3 (lower is better) Translates to: KNEYNLCQWFYQ*VGPVCFQSVAL Trigger: AAGCGCCACACTCTGAAAGCACACAGGGCCTACCCATTGGTAGAACCACTGGCATAAATTGTACTCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | CTGGACTTCATAATCCTGCCTCAACTATTCCTGGCTTaGATAAGGTTTGATGTGGTAAGAGTTCCAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: LDFIILPQLFLA*IRFDVVRVPDR Trigger: CCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATAGTTGAGGCAGGATTATGAAGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR TCA 72 bp | GATATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTaGACCTTGGAAGAAGTCTGCATGCATCTTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: DIFNCKLFLAKE*TLEEVCMHLGA Trigger: GGCCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGAATATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGTTCCAGGACAGACAGACAGCCCACAACATAGAAACTTCATTTCCAAAAAAAGTCAACACAAACTaGGGTTCCAACATAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: SKFQDRQTAHNIETSFPKKVNTN*GSNIKW Trigger: CCATTTTATGTTGGAACCCAAGTTTGTGTTGACTTT...TTTTGGAAATGAAGTTTCTATGTTGTGGGCTGTCTGTCTGTCCTGGAACTTGCT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| 3UTR TCA 72 bp | GGACTTGTAAATAATTGTGAGATACAACTGGCATGGTaGCTCTTACTAGAAAGACCAGTAACTGAGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GLVNNCEIQLAW*LLLERPVTEAK Trigger: CTTTGCCTCAGTTACTGGTCTTTCTAGTAAGAGTCACCATGCCAGTTGTATCTCACAATTATTTACAAGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | CGCTTTGTCTCCCTAGAGTCCCAAGACTTTCTAATCTTTCCCAGCCTTCCTTGCGCCAGGCCCTCCAGCTaGGAAGGAGCCCCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RFVSLESQDFLIFPSLPCARPSS*EGAPSS Trigger: GGAGGAGGGGGCTCCTTCTCAGCTGGAGGGCCTGGC...GCAAGGAAGGCTGGGAAAGATTAGAAAGTCTTGGGACTCTAGGGAGACAAAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | TCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTCGGGGAGGCACTAGGGAGGTCTACTAGGTGCTCATaGTCCACGCCCACCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SVGTTQERDTALGEALGRSTRCS*STPTPA Trigger: TGCTGGGGTGGGCGTGGAGCATGAGCACCTAGTAGA...CCTCCCTAGTGCCTCCCCGAGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | TGGCCATTCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTCGGGGAGGCACTACAGGGCAGAACCGGTaGAGACCCACTGTGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: WPFCRNNSREGHCPRGGTTGQNR*RPTVFS Trigger: GGAGAACACAGTGGGTCTGCACCGGTTCTGCCCTGT...AGTGCCTCCCCGAGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGAATGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | TCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTCGGGGAGGCACTAGGGAGGTGGAGAACATGCCTTTaGCAGGCCCTCCAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SVGTTQERDTALGEALGRWRTCL*QALQLR Trigger: TCTCAGCTGGAGGGCCTGGCAAAGGCATGTTCTCCA...CCTCCCTAGTGCCTCCCCGAGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR TCA 90 bp | CAACACAAACTTGGGTTCCAACATAAAATGGAGCCAAGAAAGGCCTGGGAAAAAGCCAGGCCCTCCAGCTaGGAAGGAGCCCCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QHKLGFQHKMEPRKAWEKARPSS*EGAPSS Trigger: GGAGGAGGGGGCTCCTTCTCAGCTGGAGGGCCTGGC...TTTTTCCCAGGCCTTTCTTGGCTCCATTTTATGTTGGAACCCAAGTTTGTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | GCGCATGGCCATTCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTCGGGGAGGCAGGATTTCGTCTTTaGTGTCAAATCGAGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AHGHSVGTTQERDTALGEAGFRL*CQIEQW Trigger: CCACTGCTCGATTTGACAGCAAAGACGAAATCCTGC...CTCCCCGAGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGAATGGCCATGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | GCTCCAGAAACATCTAGTGGCCAGACAGCACCTGCTTTGGCAGATACTCAGGAATCTACTAGGTGCTCATaGTCCACGCCCACCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: APETSSGQTAPALADTQESTRCS*STPTPA Trigger: TGCTGGGGTGGGCGTGGAGCATGAGCACCTAGTAGA...TTCCTGAGTATCTGCCAAAGCAGGTGCTGTCTGGCCACTAGATGTTTCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATAAGAGCCTGGAGAACATaGCTTTGCCAGGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAIRAWRT*LCQALQ Trigger: CTGGAGGGCCTGGCAAAGGCATGTTCTCCAGGCTCT...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | CCAGCCTTCCTTGCTCCAGAAACATCTAGTGGCCAGACAGCACCTGCTTTGGCAACAGCCGGTATGATCTaGGCAGGTGTCCATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFLAPETSSGQTAPALATAGMI*AGVHFC Trigger: GCAGAAATGGACACCTGCCCAGATCATACCGGCTGT...TGCCAAAGCAGGTGCTGTCTGGCCACTAGATGTTTCTGGAGCAAGGAAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | GGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCGCAGGATTTCGTCTTTaGTGTCAAATCGAGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLCRPGWPRTWRTTCFCAGFRL*CQIEQW Trigger: CCACTGCTCGATTTGACAGCAAAGACGAAATCCTGC...GCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | TGCTTTAGCGCATGGCCATTCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTTCTGTCAGTCGGGGGTaGAGAACCACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CFSAWPFCRNNSREGHCPSVSRG*RTTSAN Trigger: GTTGGCTGATGTGGTTCTGCACCCCCGACTGACAGA...AGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGAATGGCCATGCGCTAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | CGCTTTGTCTCCCTAGAGTCCCAAGACTTTCTAATCTTTCCCAGCCTTCCTTGCACAGGGCAGAACCGGTaGAGACCCACTGTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFVSLESQDFLIFPSLPCTGQNR*RPTVFS Trigger: GGAGAACACAGTGGGTCTGCACCGGTTCTGCCCTGT...GCAAGGAAGGCTGGGAAAGATTAGAAAGTCTTGGGACTCTAGGGAGACAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | CGCTTTGTCTCCCTAGAGTCCCAAGACTTTCTAATCTTTCCCAGCCTTCCTTGCCAGCCACAGCAGGCTTaGCACGGAGCATCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFVSLESQDFLIFPSLPCQPQQA*HGASWK Trigger: CTTCCAAGATGCTCCGTGGCAAGCCTGCTGTGGCTG...GCAAGGAAGGCTGGGAAAGATTAGAAAGTCTTGGGACTCTAGGGAGACAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | CCAGCCTTCCTTGCTCCAGAAACATCTAGTGGCCAGACAGCACCTGCTTTGGCAGTGTCTCTTGAGGTCTaGCAGTCACAGATACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PAFLAPETSSGQTAPALAVSLEV*QSQIPP Trigger: TGGTGGTATCTGTGACTGCCAGACCTCAAGAGACAC...TGCCAAAGCAGGTGCTGTCTGGCCACTAGATGTTTCTGGAGCAAGGAAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | CGCTTTGTCTCCCTAGAGTCCCAAGACTTTCTAATCTTTCCCAGCCTTCCTTGCGTCTTGGGTCTGCGCTaGCATGAATGCACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFVSLESQDFLIFPSLPCVLGLR*HECTGG Trigger: GCCTCCTGTGCATTCATGCCAGCGCAGACCCAAGAC...GCAAGGAAGGCTGGGAAAGATTAGAAAGTCTTGGGACTCTAGGGAGACAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTGGGTCTGCGCTGGCATaGATGCACAGGAGGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSGSALA*MHRRPV Trigger: TACAGGCCTCCTGTGCATTCATGCCAGCGCAGACCC...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | CCAGCCTTCCTTGCTCCAGAAACATCTAGTGGCCAGACAGCACCTGCTTTGGCATTCTCGAACTTGTCTTaGGTCTGCGCTGGCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAFLAPETSSGQTAPALAFSNLS*VCAGMN Trigger: ATTCATGCCAGCGCAGACCCAAGACAAGTTCGAGAA...TGCCAAAGCAGGTGCTGTCTGGCCACTAGATGTTTCTGGAGCAAGGAAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | CGCTTTGTCTCCCTAGAGTCCCAAGACTTTCTAATCTTTCCCAGCCTTCCTTGCCATGGTGGTGTCTCTTaGGGTCTGGCAGTCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFVSLESQDFLIFPSLPCHGGVS*GLAVTD Trigger: ATCTGTGACTGCCAGACCTCAAGAGACACCACCATG...GCAAGGAAGGCTGGGAAAGATTAGAAAGTCTTGGGACTCTAGGGAGACAAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | ATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGCATGGCCATTCTGGGTCTGCGCTGGCATaGATGCACAGGAGGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPALLSVLYNDALAHGHSGSALA*MHRRPV Trigger: TACAGGCCTCCTGTGCATTCATGCCAGCGCAGACCC...AGAATGGCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR TCA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCCGGAACAGCCGGTATaGTCTGGGCAGGTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSPEQPV*SGQVSI Trigger: AATGGACACCTGCCCAGATCATACCGGCTGTTCCGG...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGTGGAGAACATGCCTTTaGCAGGCCCTCCAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSFWPKSEPWKKSACILGWRTCL*QALQLR Trigger: TCTCAGCTGGAGGGCCTGGCAAAGGCATGTTCTCCA...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATAGTGGTGGTAGGAGGTTaGATTGTACATCCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAIVVVGG*IVHPVV Trigger: CACCACTGGATGTACAATGCAACCTCCTACCACCAC...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTGCAGGTGTCCATTTCTaGTGGACAGCGCTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSAGVHF*WTALPG Trigger: TCCAGGCAGCGCTGTCCAGCAGAAATGGACACCTGC...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CAA 72 bp | GCGTGCACTACCACAGCCCAGCAGTTTGGTGCTTCTTaGTGGACATTCTCTGGCACCTTAGAAAAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACTTTAQQFGAS*WTFSGTLEKTE Trigger: CTCAGTCTTTTCTAAGGTGCCAGAGAATGTCCACAAAGAAGCACCAAACTGCTGGGCTGTGGTAGTGCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGGTGGGGCAGCTTTCTTaGATGTGTAGCCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSFWPKSEPWKKSACILGVGQLS*MCSQHL Trigger: CAGGTGTTGGCTACACATTCAAGAAAGCTGCCCCAC...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATATGGAAGCAACCCTCTTaGTATCTTCTGGCTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAIWKQPS*YLLASR Trigger: ACGTGAAGCCAGAAGATATCAAGAGGGTTGCTTCCA...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATATCCTCTAGTTCAAACTaGACAGCCATCCTCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAISSSSN*TAILVI Trigger: GATGACGAGGATGGCTGTGCAGTTTGAACTAGAGGA...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | GGAAAAATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGCATGGCAGAGCCTGGAGAACATaGCTTTGCCAGGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKIPALLSVLYNDALAHGRAWRT*LCQALQ Trigger: CTGGAGGGCCTGGCAAAGGCATGTTCTCCAGGCTCT...GCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATACTAAAAGCAGCTTCATaGATCATCTCGGTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAILKAAS*IISVSS Trigger: ACTGCTCACCGAGATGATTCATGAAGCTGCTTTTAG...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR TCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGGGGTTGGGCCAAGGCTaGCATTTGACATGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSFWPKSEPWKKSACILGGLGQG*HLTCLF Trigger: AAAGAGACATGTCAAATGTCAGCCTTGGCCCAACCC...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR GCA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCTGCGCTGGCATGAATaGACAGGAGGCCTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSLRWHE*TGGLYL Trigger: AAGATACAGGCCTCCTGTGCATTCATGCCAGCGCAG...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | GGAACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCTGTCAAATCGAGCAGTaGACGAAAATGCCAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLCRPGWPRTWRTTCFCCQIEQ*TKMPIF Trigger: AAAAATTGGCATTTTCGTCCACTGCTCGATTTGACA...GCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATACCTCTTGATATCTTCTaGCTTCACGTTGCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSARYCPCSQPEAAIPLDIF*LHVANE Trigger: CTCATTCGCAACGTGAAGCCAGAAGATATCAAGAGG...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CAA 72 bp | GGAGCCAAGAAAGGCCTGGGAAAAATCCCCGCATTATaGTCTGTCTTGTACAATGATGCTTTAGCGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAKKGLGKIPAL*SVLYNDALAHG Trigger: GCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCCCAGGCCTTTCTTGGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR TCA 90 bp | GTCTTGTACAATGATGCTTTAGCGCATGGCCATTCTGTAGGAACAACTCAAGAGCATGGTGGTGTCTCTTaGGGTCTGGCAGTCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYNDALAHGHSVGTTQEHGGVS*GLAVTD Trigger: ATCTGTGACTGCCAGACCTCAAGAGACACCACCATG...CTCTTGAGTTGTTCCTACAGAATGGCCATGCGCTAAAGCATCATTGTACAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | ATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGCATGGCCATTCTCTGCGCTGGCATGAATaGACAGGAGGCCTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPALLSVLYNDALAHGHSLRWHE*TGGLYL Trigger: AAGATACAGGCCTCCTGTGCATTCATGCCAGCGCAG...AGAATGGCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR CCA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGGGATGTGCTCATAGGTaGGTAGGTCAGTCAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSFWPKSEPWKKSACILGGCAHR*VGQSNH Trigger: GTGATTTGACTGACCTACCCACCTATGAGCACATCC...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGAAAAATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGTTCTCGAACTTGTCTTaGGTCTGCGCTGGCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGKIPALLSVLYNDALAFSNLS*VCAGMN Trigger: ATTCATGCCAGCGCAGACCCAAGACAAGTTCGAGAA...CGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCCCAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | CTGGGAAAAATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGCATGTGGTGGTAGGAGGTTaGATTGTACATCCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKIPALLSVLYNDALAHVVVGG*IVHPVV Trigger: CACCACTGGATGTACAATGCAACCTCCTACCACCAC...ATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGTTCCAGGACAGACAGACAGCCCACAACATAGAAACTTCATTTCCAAAAGTGTCTCTTGAGGTCTaGCAGTCACAGATACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKFQDRQTAHNIETSFPKVSLEV*QSQIPP Trigger: TGGTGGTATCTGTGACTGCCAGACCTCAAGAGACAC...TTTTGGAAATGAAGTTTCTATGTTGTGGGCTGTCTGTCTGTCCTGGAACTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR TCA 90 bp | GGAAAAATCCCCGCATTATTGTCTGTCTTGTACAATGATGCTTTAGCGCATGGCCTAAAAGCAGCTTCATaGATCATCTCGGTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKIPALLSVLYNDALAHGLKAAS*IISVSS Trigger: ACTGCTCACCGAGATGATTCATGAAGCTGCTTTTAG...GCCATGCGCTAAAGCATCATTGTACAAGACAGACAATAATGCGGGGATTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS-3UTR GCA 90 bp | GAGTTTGAGATGAGTATATCTTATATCAAGTCTCAAGCCACTCAGGGTTTTACTTCTGTCAGTCGGGGGTaGAGAACCACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EFEMSISYIKSQATQGFTSVSRG*RTTSAN Trigger: GTTGGCTGATGTGGTTCTGCACCCCCGACTGACAGA...AGTAAAACCCTGAGTGGCTTGAGACTTGATATAAGATATACTCATCTCAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | GAGTTTGAGATGAGTATATCTTATATCAAGTCTCAAGCCACTCAGGGTTTTACTGGTGTCCATTTCTGCTaGACAGCGCTGCCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EFEMSISYIKSQATQGFTGVHFC*TALPGC Trigger: ACATCCAGGCAGCGCTGTCCAGCAGAAATGGACACC...AGTAAAACCCTGAGTGGCTTGAGACTTGATATAAGATATACTCATCTCAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CAA 72 bp | ACAGTAACTTTCATTCAAGTTTCCAGAGTTTCACTGTaGGCACTGTTCACACAGCTAGCTAGCCTTATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTFIQVSRVSL*ALFTQLASLMQ Trigger: CTGCATAAGGCTAGCTAGCTGTGTGAACAGTGCCAACAGTGAAACTCTGGAAACTTGAATGAAAGTTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| 3UTR CAA 72 bp | TTAGAAAAGACTGAGGTAATCCTGGAACTTCCCAGTTaGGCCCAAGATCAAGATCATAAAGTCTTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKTEVILELPS*AQDQDHKVLGV Trigger: GACCCCTAAGACTTTATGATCTTGATCTTGGGCCAAACTGGGAAGTTCCAGGATTACCTCAGTCTTTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CCA 90 bp | CAACACAAACTTGGGTTCCAACATAAAATGGAGCCAAGAAAGGCCTGGGAAAAATGTCAAATCGAGCAGTaGACGAAAATGCCAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHKLGFQHKMEPRKAWEKCQIEQ*TKMPIF Trigger: AAAAATTGGCATTTTCGTCCACTGCTCGATTTGACA...TTTTTCCCAGGCCTTTCTTGGCTCCATTTTATGTTGGAACCCAAGTTTGTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| 3UTR CAA 72 bp | AAAAACAAAGGAGAAGATTGTGAAATACCTTTAGGCTaGTTAAAGAACTTAAGCTTTAGAAATGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNKGEDCEIPLG*LKNLSFRNEAR Trigger: CCTGGCCTCATTTCTAAAGCTTAAGTTCTTTAACAAGCCTAAAGGTATTTCACAATCTTCTCCTTTGTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS-3UTR CAA 90 bp | GCGCATGGCCATTCTGTAGGAACAACTCAAGAGAGGGACACTGCCCTCGGGGAGAGCAGGATTTCGTCTTaGCTGTCAAATCGAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AHGHSVGTTQERDTALGESRISS*LSNRAV Trigger: CACTGCTCGATTTGACAGCAAAGACGAAATCCTGCT...CTCCCCGAGGGCAGTGTCCCTCTCTTGAGTTGTTCCTACAGAATGGCCATGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATCCCAGTAGTTGGGAAGCCAATCAGGTGGCTCTGAGTTCAAGACCAGCCCTGGAGAACATGCCTTaGCCAGGCCCTCCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FNPSSWEANQVALSSRPALENMP*PGPPAE Trigger: CTCAGCTGGAGGGCCTGGCAAAGGCATGTTCTCCAG...GGCTGGTCTTGAACTCAGAGCCACCTGATTGGCTTCCCAACTACTGGGATTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTTCCTTGCTCCAGAAACATCTAGTGGCCAGACAGCACCTGCTTTGGCATGTGGTGGTAGGAGGTaGCATTGTACATCCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PAFLAPETSSGQTAPALACGGRR*HCTSSG Trigger: ACCACTGGATGTACAATGCAACCTCCTACCACCACA...TGCCAAAGCAGGTGCTGTCTGGCCACTAGATGTTTCTGGAGCAAGGAAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
||
| CDS-3UTR CAA 90 bp | GACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCTGGAGAACATGCCTTaGCCAGGCCCTCCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DIEVKGQTFGLSCHLLLSLENMP*PGPPAE Trigger: CTCAGCTGGAGGGCCTGGCAAAGGCATGTTCTCCAG...ACTGAGTAGCAGGTGACAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGGTCTTTCTGCTAGGTACTGTCCCTGCTCACAGCCAGAAGCAGCAATATTGCCACGGAGCATCTaGGAAGCAACCCTCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: IPGLSARYCPCSQPEAAILPRSI*EATLLI Trigger: TATCAAGAGGGTTGCTTCCAAGATGCTCCGTGGCAA...TATTGCTGCTTCTGGCTGTGAGCAGGGACAGTACCTAGCAGAAAGACCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
||
| CDS-3UTR CAA 90 bp | AACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGGGGAGCAGGATTTCGTCTTaGCTGTCAAATCGAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSFWPKSEPWKKSACILGSRISS*LSNRAV Trigger: CACTGCTCGATTTGACAGCAAAGACGAAATCCTGCT...CCCCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
||
| CDS CCA 72 bp | CTCCCCAGGCAGGCTCGGCTCCCACGAGGTACTTTCTaGCACATTCTACTAGGTGCTCATGCTCCACGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LPRQARLPRGTF*HILLGAHAPRP Trigger: TGGGCGTGGAGCATGAGCACCTAGTAGAATGTGCCAGAAAGTACCTCGTGGGAGCCGAGCCTGCCTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076431.13 ENSMUST00000114093.2 |
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| CDS GCA 72 bp | GCTCCCACGAGGTACTTTCTGGCACATTCTACTAGGTaGTCATGCTCCACGCCCACCCCAGCAAGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: APTRYFLAHSTR*SCSTPTPASTM Trigger: CATGGTGCTTGCTGGGGTGGGCGTGGAGCATGAGCACCTAGTAGAATGTGCCAGAAAGTACCTCGTGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076431.13 ENSMUST00000114093.2 |
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| CDS GCA 72 bp | GGAACAGCCGGTATGATCTGGGCAGGTGTCCATTTCTaGTGGACAGCGCTGCCTGGATGTGCTCATAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GTAGMIWAGVHF*WTALPGCAHRW Trigger: CCACCTATGAGCACATCCAGGCAGCGCTGTCCAGCAGAAATGGACACCTGCCCAGATCATACCGGCTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS CAA 72 bp | CCCAGGGCAGCCACAGCAGGCTTGCCACGGAGCATCTaGGAAGCAACCCTCTTGATATCTTCTGGCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: PRAATAGLPRSI*EATLLISSGFT Trigger: CGTGAAGCCAGAAGATATCAAGAGGGTTGCTTCCAAGATGCTCCGTGGCAAGCCTGCTGTGGCTGCCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS GCA 72 bp | ACGAGGTACTTTCTGGCACATTCTACTAGGTGCTCATaGTCCACGCCCACCCCAGCAAGCACCATGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TRYFLAHSTRCS*STPTPASTMRS Trigger: TGACCGCATGGTGCTTGCTGGGGTGGGCGTGGAGCATGAGCACCTAGTAGAATGTGCCAGAAAGTACCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076431.13 ENSMUST00000114093.2 |
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| CDS CAA 90 bp | GTCAAATCACCCAGGGCAGCCACAGCAGGCTTGCCACGGAGCATCTaGGAAGCAACCCTCTTGATATCTTCTGGCTTCACGTTGCGAATG | + |
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Preference number: 6 (lower is better) Translates to: VKSPRAATAGLPRSI*EATLLISSGFTLRM Trigger: CATTCGCAACGTGAAGCCAGAAGATATCAAGAGGGTTGCTTCCAAGATGCTCCGTGGCAAGCCTGCTGTGGCTGCCCTGGGTGATTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS GCA 72 bp | TGTGGCTCTTTCAGCCGAGTGACTTGCTACATCAGGTaGACAGGATGCTCCAGGCCTTACCAAATCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: CGSFSRVTCYIR*TGCSRPYQIHR Trigger: ACGGTGGATTTGGTAAGGCCTGGAGCATCCTGTGCACCTGATGTAGCAAGTCACTCGGCTGAAAGAGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114093.2 |
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| CDS CAA 90 bp | GCAGCCACAGCAGGCTTGCCACGGAGCATCTTGGAAGCAACCCTCTaGATATCTTCTGGCTTCACGTTGCGAATGAGTGTACATAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AATAGLPRSILEATL*ISSGFTLRMSVHSS Trigger: CGAGCTATGTACACTCATTCGCAACGTGAAGCCAGAAGATATCAAGAGGGTTGCTTCCAAGATGCTCCGTGGCAAGCCTGCTGTGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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| CDS GCA 72 bp | TCGATCTTCGCTATGTTCTCTACAGGGCAGAACCGGTaGAGACCCACTGTGTTCTCCCTAAAAGCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SIFAMFSTGQNR*RPTVFSLKAAS Trigger: TGAAGCTGCTTTTAGGGAGAACACAGTGGGTCTGCACCGGTTCTGCCCTGTAGAGAACATAGCGAAGATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076431.13 ENSMUST00000114093.2 |
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| CDS GCA 72 bp | TTTCTCGAACTTGTCTTGGGTCTGCGCTGGCATGAATaGACAGGAGGCCTGTATCTTCATAGCTGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FLELVLGLRWHE*TGGLYLHSCGG Trigger: ACCACCACAGCTATGAAGATACAGGCCTCCTGTGCATTCATGCCAGCGCAGACCCAAGACAAGTTCGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076431.13 ENSMUST00000114093.2 |
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| CDS CAA 72 bp | GCAGGCTTGCCACGGAGCATCTTGGAAGCAACCCTCTaGATATCTTCTGGCTTCACGTTGCGAATGAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: AGLPRSILEATL*ISSGFTLRMSV Trigger: TACACTCATTCGCAACGTGAAGCCAGAAGATATCAAGAGGGTTGCTTCCAAGATGCTCCGTGGCAAGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076431.13 |
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