Pregenerated sensors for PMM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022474Ensembl transcript IDs: ENSMUST00000023112.12, ENSMUST00000071462.7, ENSMUST00000155781.2, ENSMUST00000229120.2, ENSMUST00000230229.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTGTGGGTaGCCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TWLGTVPTQTLVLCG*PCSAPTGCYVLGQW Trigger: CCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 90 bp | TCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTaGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACG | + |
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Preference number: 1 (lower is better) Translates to: SRQEPPGWGQFPHRR*SCVGDPAVPPQDAT Trigger: CGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 90 bp | ACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATaGGAACCGTGGCACCCAATGGTTCTATCTTCAGGCCTGGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: TLQCPHRMLRVGPVG*EPWHPMVLSSGLVR Trigger: TCTGACCAGGCCTGAAGATAGAACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 90 bp | TCTTTGAAGGTCCCAGTGCTCAGCTGTGGGCCCAGTCACGCCTCGTaGGCTGTCTCTGGGAAGAAGAGCTCACGGCATCGCTGTACAGTG | + |
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Preference number: 1 (lower is better) Translates to: SLKVPVLSCGPSHAS*AVSGKKSSRHRCTV Trigger: CACTGTACAGCGATGCCGTGAGCTCTTCTTCCCAGAGACAGCCCACGAGGCGTGACTGGGCCCACAGCTGAGCACTGGGACCTTCAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR CCA 90 bp | CAGTGGGATGGGAACCGTGGCACCCAATGGTTCTATCTTCAGGCCTaGTCAGAGCTCTTTGAAGGTCCCAGTGCTCAGCTGTGGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QWDGNRGTQWFYLQA*SELFEGPSAQLWAQ Trigger: CTGGGCCCACAGCTGAGCACTGGGACCTTCAAAGAGCTCTGACCAGGCCTGAAGATAGAACCATTGGGTGCCACGGTTCCCATCCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTAGAGAGCAGGTATGCGTCTCGTCAGGAGCCACCTGGCTGGGGACAGTTAGTGCCCCCACAGGATaGTACGTGTTGGGCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QGREQVCVSSGATWLGTVSAPTG*YVLGQW Trigger: CCACTGGCCCAACACGTAGCATCCTGTGGGGGCACT...AACTGTCCCCAGCCAGGTGGCTCCTGACGAGACGCATACCTGCTCTCTACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTGTGGCAGGATGCTACGTGTTaGGCCAGTGGGATGGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: VRSHLAGDSSHTDVGPVWQDATC*ASGMGT Trigger: GGTTCCCATCCCACTGGCCCAACACGTAGCATCCTG...CCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGGTGAGACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCAGTGCCCCCACAGGATaGTACGTGTTGGGCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PVVRPVLSPKPAASEARTSAPTG*YVLGQW Trigger: CCACTGGCCCAACACGTAGCATCCTGTGGGGGCACT...GGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGTCTCACCACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CCA 90 bp | CACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTGTGGGTGACCCTGAACCGTGGCACCCAATaGTTCTATCTTCAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HLAGDSSHTDVGPVWVTLNRGTQ*FYLQAW Trigger: CCAGGCCTGAAGATAGAACCATTGGGTGCCACGGTT...CAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR TCA 90 bp | TCCATAGCACAACTCCCATGCCACCCTGTGGTGAGACCTGTTCTGTCCCCAAAATTGGTCCTGTGTGGGTaGCCCTGCAGTGCCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: SIAQLPCHPVVRPVLSPKLVLCG*PCSAPT Trigger: TGTGGGGGCACTGCAGGGTCACCCACACAGGACCAA...TTTTGGGGACAGAACAGGTCTCACCACAGGGTGGCATGGGAGTTGTGCTATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCATCAGCAGGATGCTACGTGTTaGGCCAGTGGGATGGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: GETCSVPKTSSIRGQDHQQDATC*ASGMGT Trigger: GGTTCCCATCCCACTGGCCCAACACGTAGCATCCTG...CTGATGGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CCA 90 bp | GCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGCATTCCCGCCAGGACTaGTCTCATTTCCAAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASLYSVLRGDHAMADSPGHSRQD*SHFQRS Trigger: ACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATG...CCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCCATTCCCGCCAGGACTaGTCTCATTTCCAAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HGIAVQCPEGRPRYGRQSHSRQD*SHFQRS Trigger: ACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATG...GGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCACACAGACGTTGGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGTTCTATCTTCAGGCCTaGTCAGAGCTCTTTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SSHTDVGPVWVTLQCPHRFYLQA*SELFEG Trigger: ACCTTCAAAGAGCTCTGACCAGGCCTGAAGATAGAA...CCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCATCAGGGTAGAAACCGTGGCACCCAATaGTTCTATCTTCAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TCSVPKTSSIRGQDHQGRNRGTQ*FYLQAW Trigger: CCAGGCCTGAAGATAGAACCATTGGGTGCCACGGTT...TCTACCCTGATGGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTCTCTGGGAAGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGTTCCAAAGAAGTGGATaGTGTCAAAGCTGTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: GLSLGRRAHGIAVQCPEGFQRSG*CQSCLH Trigger: ATGAAGACAGCTTTGACATCATCCACTTCTTTGGAA...CCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCTTCCCAGAGACAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCTTCCAAAGAAGTGGATaGTGTCAAAGCTGTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RRAHGIAVQCPEGRPRYGFQRSG*CQSCLH Trigger: ATGAAGACAGCTTTGACATCATCCACTTCTTTGGAA...GCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR CCA 72 bp | GAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTaGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: EPPGWGQFPHRR*SCVGDPAVPPQ Trigger: CTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR TCA 72 bp | GGGAAGAAGAGCTCACGGCATCGCTGTACAGTGTCCTaGGGGGAGACCACGCTATGGCCGACAGTCCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKKSSRHRCTVS*GETTLWPTVRG Trigger: CCCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR CCA 72 bp | GGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTaGGCCAGTGGGATGGGAACCGTGGCACCCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GDPAVPPQDATC*ASGMGTVAPNG Trigger: ACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCACCTGGTCAGAGCTCTTaGAAGGTCCCAGTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPVWVTLQCPHRMLRVGPPGQSS*KVPVLS Trigger: GCTGAGCACTGGGACCTTCAAAGAGCTCTGACCAGG...TGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 72 bp | GCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTGTaGGTGACCCTGCAGTGCCCCCACAGGATGCTACGT | + |
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Preference number: 3 (lower is better) Translates to: AGDSSHTDVGPV*VTLQCPHRMLR Trigger: ACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCAGGTATGCGTCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACCCTGGTCAGAGCTCTTaGAAGGTCCCAGTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESRYASRQEPPGWGQFPHPGQSS*KVPVLS Trigger: GCTGAGCACTGGGACCTTCAAAGAGCTCTGACCAGG...GTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGACGCATACCTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR TCA 72 bp | GGGACAGTTCCCACACAGACGTTGGTCCTGTGTGGGTaGCCCTGCAGTGCCCCCACAGGATGCTACGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: GTVPTQTLVLCG*PCSAPTGCYVL Trigger: CAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 72 bp | GGTAGAGAGCAGGTATGCGTCTCGTCAGGAGCCACCTaGCTGGGGACAGTTCCCACACAGACGTTGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GREQVCVSSGAT*LGTVPTQTLVL Trigger: CAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGACGCATACCTGCTCTCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 72 bp | TGGTCAGAGCTCTTTGAAGGTCCCAGTGCTCAGCTGTaGGCCCAGTCACGCCTCGTGGGCTGTCTCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: WSELFEGPSAQL*AQSRLVGCLWE Trigger: TTCCCAGAGACAGCCCACGAGGCGTGACTGGGCCCACAGCTGAGCACTGGGACCTTCAAAGAGCTCTGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| 3UTR CCA 72 bp | TGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATaGGAACCGTGGCACCCAATGGTTCTATCTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: CPHRMLRVGPVG*EPWHPMVLSSG Trigger: GCCTGAAGATAGAACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 72 bp | TGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTaGGATGGGAACCGTGGCACCCAATGGTTCTATCTT | + |
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Preference number: 3 (lower is better) Translates to: CSAPTGCYVLGQ*DGNRGTQWFYL Trigger: AAGATAGAACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR GCA 72 bp | AGTCTGTGGCCAGCAGGCTCCATAGCACAACTCCCATaGCACCCTGTGGTGAGACCTGTTCTGTCCCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SLWPAGSIAQLP*HPVVRPVLSPK Trigger: TTTTGGGGACAGAACAGGTCTCACCACAGGGTGGCATGGGAGTTGTGCTATGGAGCCTGCTGGCCACAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR CCA 72 bp | GGGAACCGTGGCACCCAATGGTTCTATCTTCAGGCCTaGTCAGAGCTCTTTGAAGGTCCCAGTGCTCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: GNRGTQWFYLQA*SELFEGPSAQL Trigger: CAGCTGAGCACTGGGACCTTCAAAGAGCTCTGACCAGGCCTGAAGATAGAACCATTGGGTGCCACGGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| 3UTR TCA 72 bp | TCGGAACCAAAAACTCCTCCTCCAAACCCACTTTACTaGCGAGAAAGCAAAGCTCAGAGTGGCCGAGTGACA | + |
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Preference number: 3 (lower is better) Translates to: SEPKTPPPNPLY*RESKAQSGRVT Trigger: TGTCACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGAGTTTTTGGTTCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
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| 3UTR CCA 72 bp | TCATTCCCGCCAGGACTGGTCTCATTTCCAAAGAAGTaGATGATGTCAAAGCTGTCTTCATCCAGGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SFPPGLVSFPKK*MMSKLSSSRLS Trigger: GGACAGCCTGGATGAAGACAGCTTTGACATCATCCACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGGGGGAGACCACGCTATaGCCGACAGTCCGGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PAVPPQDATCWASGMGTVGETTL*PTVRGS Trigger: GGACCCCCGGACTGTCGGCCATAGCGTGGTCTCCCC...CACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR TCA 90 bp | GGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCATCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GPVWVTLQCPHRMLRVGPSGELA*GSRPRQ Trigger: TTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGA...TGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR GCA 90 bp | GCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGTCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ASLYSVLRGDHAMADSPGSSPPG*SCGQWA Trigger: CGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGA...CCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS-3UTR GCA 90 bp | CCACGCTATGGCCGACAGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCGCCCTCGACGGCGACTaGCATGGCTGTAGCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PRYGRQSGGPHRSQSHSRALDGD*HGCSSA Trigger: CGCGGAGCTACAGCCATGGCAGTCGCCGTCGAGGGC...GCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACTGTCGGCCATAGCGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGAGAGCAGGTATGCGTCTCGTCAGGAGCCACCTGGCTGGGGACAGTTGGGGAGACCACGCTATaGCCGACAGTCCGGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QGREQVCVSSGATWLGTVGETTL*PTVRGS Trigger: GGACCCCCGGACTGTCGGCCATAGCGTGGTCTCCCC...AACTGTCCCCAGCCAGGTGGCTCCTGACGAGACGCATACCTGCTCTCTACCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR TCA 90 bp | CCACGCTATGGCCGACAGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PRYGRQSGGPHRSQSHSRSGELA*GSRPRQ Trigger: TTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGA...GCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACTGTCGGCCATAGCGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGCAAACAGGCAGAGGATaGGCTCTTTCCTGCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PAVPPQDATCWASGMGTVQTGRG*ALSCGR Trigger: GCGCCCGCAGGAAAGAGCGCATCCTCTGCCTGTTTG...CACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR GCA 90 bp | TCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTTCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SRQEPPGWGQFPHRRWSCSSPPG*SCGQWA Trigger: CGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGA...ACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR GCA 90 bp | ATCAGAGGCCAGGACCATCAGGGTAGAGAGCAGGTATGCGTCTCGTCAGGAGCCTCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IRGQDHQGREQVCVSSGASSPPG*SCGQWA Trigger: CGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGA...GGCTCCTGACGAGACGCATACCTGCTCTCTACCCTGATGGTCCTGGCCTCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR CCA 90 bp | GCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGAATTTTCTGGCGAGCTaGCGTGAGGGTCCCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ASLYSVLRGDHAMADSPGNFLAS*REGPVH Trigger: GTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATT...CCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| CDS-3UTR CCA 90 bp | GTTGGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VGPVWVTLQCPHRMLRVGSSSPR*FWIVSG Trigger: CCCTGAGACGATCCAGAACCACCTGGGGGAGGAGCT...CCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS-3UTR TCA 90 bp | TGCCATTCTGTCCCTTGTCAGTCTGTGGCCAGCAGGCTCCATAGCACAACTCCCTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: CHSVPCQSVASRLHSTTPSGELA*GSRPRQ Trigger: TTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGA...GGGAGTTGTGCTATGGAGCCTGCTGGCCACAGACTGACAAGGGACAGAATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGCGCCGATCTGTACCCTaGTTCGTAGCTTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PAVPPQDATCWASGMGTVRRSVP*FVASAG Trigger: TCCTGCAGAAGCTACGAAGCAGGGTACAGATCGGCG...CACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023112.12 |
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| CDS-3UTR GCA 90 bp | TGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGGCACCCAAAGTTGATCAAGTCCTaGAGGAGCTCCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPHRMLRVGPVGWEPWHPKLIKS*RSSSPR Trigger: CCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTT...TGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAAAGTTGATCAAGTCCTaGAGGAGCTCCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVWVTLQCPHRMLRVGPKLIKS*RSSSPR Trigger: CCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTT...TGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTCAAACAGGCAGAGGATaGGCTCTTTCCTGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WEEELTASLYSVLRGDHAQTGRG*ALSCGR Trigger: GCGCCCGCAGGAAAGAGCGCATCCTCTGCCTGTTTG...AGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGGTCCGCATAGATAAGTTGATCAAGTCCTaGAGGAGCTCCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLRGDHAMADSPGVRIDKLIKS*RSSSPR Trigger: CCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTT...ATCTATGCGGACCCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCAAGAACCGCAGCCCCTTaGCAGCAAACTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVWVTLQCPHRMLRVGPRTAAP*QQTLSS Trigger: TGAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCT...TGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGGTCCGCATAGATCTCAGAACCGCAGCCCCTTaGCAGCAAACTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRGDHAMADSPGVRIDLRTAAP*QQTLSS Trigger: TGAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCT...GAGATCTATGCGGACCCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCCCACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGGCACCCATCCCCCAGGTGGTTCTaGATCGTCTCAGGGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CPHRMLRVGPVGWEPWHPSPRWF*IVSGSI Trigger: AATTGACCCTGAGACGATCCAGAACCACCTGGGGGA...TGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
||
| CDS-3UTR CCA 90 bp | CACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGGCACCCAATGGTTAATTTTCTGGCGAGCTaGCGTGAGGGTCCCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRMLRVGPVGWEPWHPMVNFLAS*REGPVH Trigger: GTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATT...AACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCTCTGGGAAGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGAAATTTTCTGGCGAGCTaGCGTGAGGGTCCCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLWEEELTASLYSVLRGNFLAS*REGPVH Trigger: GTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATT...TCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCTTCCCAGAGACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR CCA 90 bp | CGCTATGGCCGACAGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCCAGAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYGRQSGGPHRSQSHSRQSSSPR*FWIVCL Trigger: CAAACAGACGATCCAGAACCACCTGGGGGAGGAGCT...CTGGCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACTGTCGGCCATAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCGCATAGATCTCAAAGTCATTCCCGCCAGGACTGGTCTCATTTCCAAATCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVRIDLKVIPARTGLISKSGELA*GSRPRQ Trigger: TTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGA...TTTGGAAATGAGACCAGTCCTGGCGGGAATGACTTTGAGATCTATGCGGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTGACAGGTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPTLLTRKQSSEWPSDRSGELA*GSRPRQ Trigger: TTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGA...CCTGTCACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCATCAGGGTAGACAAACAGGCAGAGGATaGGCTCTTTCCTGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSVPKTSSIRGQDHQGRQTGRG*ALSCGR Trigger: GCGCCCGCAGGAAAGAGCGCATCCTCTGCCTGTTTG...TCTACCCTGATGGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | TCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEPPGWGQFPHRRWSCLLRSF*RKADTS Trigger: TGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAG...ACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023112.12 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGAGCTCTTTGAAGGTCCCAGTGCTCAGCTGTGGGCCCAGTCACGCCTCCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSELFEGPSAQLWAQSRLLLRSF*RKADTS Trigger: TGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAG...GAGGCGTGACTGGGCCCACAGCTGAGCACTGGGACCTTCAAAGAGCTCTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTCTGGGAAGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGACGCCGATCTGTACCCTaGTTCGTAGCTTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCLWEEELTASLYSVLRGRRSVP*FVASAG Trigger: TCCTGCAGAAGCTACGAAGCAGGGTACAGATCGGCG...TCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCTTCCCAGAGACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTGACTCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSKPTLLTRKQSSEWPSDSSPPG*SCGQWA Trigger: CGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGA...GTCACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR GCA 90 bp | TCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTAGAACCGCAGCCCCTTaGCAGCAAACTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQEPPGWGQFPHRRWSCRTAAP*QQTLSS Trigger: TGAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCT...ACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | CAGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCCAGGACTGGTCTCATCTCCAGGGTGCAGCCTaGTTCGTAGCTTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSGGPHRSQSHSRQDWSHLQGAA*FVASAG Trigger: TCCTGCAGAAGCTACGAAGCAGGCTGCACCCTGGAG...ATGAGACCAGTCCTGGCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155781.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTGAGACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVVRPVLSPKPAASEARTSSSPR*FWIVCL Trigger: CAAACAGACGATCCAGAACCACCTGGGGGAGGAGCT...GGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGTCTCACCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023112.12 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCAGAACCGCAGCCCCTTaGCAGCAAACTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRAHGIAVQCPEGRPRYGRTAAP*QQTLSS Trigger: TGAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCT...GCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCCAGGACTGGTCTCATTTCCTCTCCTCCAGGGTaGAGCCTGCTTCGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGVRIDLKVIPARTGLISSPPG*SLLRSF Trigger: GAAGCTACGAAGCAGGCTGCACCCTGGAGGAGAGGA...AATGAGACCAGTCCTGGCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155781.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCATCAGGGTAGAAATTTTCTGGCGAGCTaGCGTGAGGGTCCCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCSVPKTSSIRGQDHQGRNFLAS*REGPVH Trigger: GTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATT...TCTACCCTGATGGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCTCACGGCATCGCTGTACAGTGTCCTGAGGGGAGACCACGCTATGGCTCCCCCAGGTGGTTCTaGATCGTCTGTTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRAHGIAVQCPEGRPRYGSPRWF*IVCLES Trigger: ACTCTCCAAACAGACGATCCAGAACCACCTGGGGGA...GCCATAGCGTGGTCTCCCCTCAGGACACTGTACAGCGATGCCGTGAGCTCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS-3UTR CCA 90 bp | TGCCATTCTGTCCCTTGTCAGTCTGTGGCCAGCAGGCTCCATAGCACAACTCCCTCCCCCAGGTGGTTCTaGATCGTCTGTTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHSVPCQSVASRLHSTTPSPRWF*IVCLES Trigger: ACTCTCCAAACAGACGATCCAGAACCACCTGGGGGA...GGGAGTTGTGCTATGGAGCCTGCTGGCCACAGACTGACAAGGGACAGAATGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023112.12 |
||
| CDS-3UTR TCA 90 bp | GGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGATGCTACGTGTTGGGCCATTCCAAAGAAGTGGATaGTGTCAAAGCTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPVWVTLQCPHRMLRVGPFQRSG*CQSCLH Trigger: ATGAAGACAGCTTTGACATCATCCACTTCTTTGGAA...TGGCCCAACACGTAGCATCCTGTGGGGGCACTGCAGGGTCACCCACACAGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | AAACTCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCCAAACAGGCAGAGGATaGGCTCTTTCCTGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLLQTHFTDEKAKLRVAQTGRG*ALSCGR Trigger: GCGCCCGCAGGAAAGAGCGCATCCTCTGCCTGTTTG...GGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGCGCCGATCTGTACCCTaGTTCGTAGCTTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQTHFTDEKAKLRVAERRSVP*FVASAG Trigger: TCCTGCAGAAGCTACGAAGCAGGGTACAGATCGGCG...CTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTAATTTTCTGGCGAGCTaGCGTGAGGGTCCCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSKPTLLTRKQSSEWPSNFLAS*REGPVH Trigger: GTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATT...ACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTGACAAGTTGATCAAGTCCTaGAGGAGCTCCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKPTLLTRKQSSEWPSDKLIKS*RSSSPR Trigger: CCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTT...GTCACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCATTTCCAAAGAAGTGGATGATGTCAAAGCTGTCTTCATCCAGGCTGTCCAAACAGGCAGAGGATaGGCTCTTTCCTGCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLISKEVDDVKAVFIQAVQTGRG*ALSCGR Trigger: GCGCCCGCAGGAAAGAGCGCATCCTCTGCCTGTTTG...GACAGCCTGGATGAAGACAGCTTTGACATCATCCACTTCTTTGGAAATGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKPTLLTRKQSSEWPSLLRSF*RKADTS Trigger: TGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAG...ACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGAGTTCCCCCAGGTGGTTCTaGATCGTCTGTTTGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSKPTLLTRKQSSEWPSSPRWF*IVCLES Trigger: ACTCTCCAAACAGACGATCCAGAACCACCTGGGGGA...ACTCGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLLQTHFTDEKAKLRVASSSPR*FWIVCL Trigger: CAAACAGACGATCCAGAACCACCTGGGGGAGGAGCT...GGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCATCAGGGTAGACATTCCCGCCAGGACTaGTCTCATTTCCAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCSVPKTSSIRGQDHQGRHSRQD*SHFQRS Trigger: ACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATG...TCTACCCTGATGGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CCA 90 bp | TCCATAGCACAACTCCCATGCCACCCTGTGGTGAGACCTGTTCTGTCCCCAAAACATTCCCGCCAGGACTaGTCTCATTTCCAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIAQLPCHPVVRPVLSPKHSRQD*SHFQRS Trigger: ACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATG...TTTTGGGGACAGAACAGGTCTCACCACAGGGTGGCATGGGAGTTGTGCTATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR GCA 90 bp | CTCAAAGTCATTCCCGCCAGGACTGGTCTCATTTCCAAAGAAGTGGATGATGTCCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKVIPARTGLISKEVDDVLLRSF*RKADTS Trigger: TGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAG...GACATCATCCACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATGACTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
||
| CDS-3UTR CAA 90 bp | CACCTGGCTGGGGACAGTTCCCACACAGACGTTGGTCCTGTGTGGGTGACCCTGAAGGTCCCACGCTTCTaGGGCAGTCTGAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLAGDSSHTDVGPVWVTLKVPRF*GSLSRA Trigger: GGCCCTGCTCAGACTGCCCAAGAAGCGTGGGACCTT...CAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACTGTCCCCAGCCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS GCA 90 bp | ACGGCACCTTGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCGAGACGTTCAGCATGCCATTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TAPCPVPRTRSSPPG*SCGQWARRSACHSG Trigger: TCCGGAATGGCATGCTGAACGTCTCGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGGTGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
||
| CDS GCA 90 bp | GTCTGGGCTTGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCGAGACGTTCAGCATGCCATTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VWACPVPRTRSSPPG*SCGQWARRSACHSG Trigger: TCCGGAATGGCATGCTGAACGTCTCGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGCCCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS CCA 90 bp | CAAACAGGAAGCTGGCACGGCGACACAGTGACGCTGAGGCCAGTCTaGGCTTGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTGSWHGDTVTLRPV*ACPVPRTRSSPPGC Trigger: GCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGCCCAGACTGGCCTCAGCGTCACTGTGTCGCCGTGCCAGCTTCCTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGTGAGACCTGTTCTGTCCCCAAAACCAGCAGCATCAGAGGCCAGGACCAAGGTCCCACGCTTCTaGGGCAGTCTGAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVVRPVLSPKPAASEARTKVPRF*GSLSRA Trigger: GGCCCTGCTCAGACTGCCCAAGAAGCGTGGGACCTT...GGTCCTGGCCTCTGATGCTGCTGGTTTTGGGGACAGAACAGGTCTCACCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGGTATGCGTCTCGTCAGGAGCCACCTGGCTGGGGACAGTTCCCACACGAGAACCGCAGCCCCTaGCCAGCAAACTCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESRYASRQEPPGWGQFPHENRSP*PANSVF Trigger: GAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCTC...GTGTGGGAACTGTCCCCAGCCAGGTGGCTCCTGACGAGACGCATACCTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CAA 90 bp | AGTTCCCACACAGACGTTGGTCCTGTGTGGGTGACCCTGCAGTGCCCCCACAGGGAGAACCGCAGCCCCTaGCCAGCAAACTCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSHTDVGPVWVTLQCPHRENRSP*PANSVF Trigger: GAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCTC...CCTGTGGGGGCACTGCAGGGTCACCCACACAGGACCAACGTCTGTGTGGGAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCTGAGGGGAGACCACGCTATGGCCGACAGTCCGGGGGTCCGCATAGATGAGAACCGCAGCCCCTaGCCAGCAAACTCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SVLRGDHAMADSPGVRIDENRSP*PANSVF Trigger: GAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCTC...ATCTATGCGGACCCCCGGACTGTCGGCCATAGCGTGGTCTCCCCTCAGGACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| CDS-3UTR CAA 90 bp | TGGTCAGAGCTCTTTGAAGGTCCCAGTGCTCAGCTGTGGGCCCAGTCACGCCTCGAGAACCGCAGCCCCTaGCCAGCAAACTCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: WSELFEGPSAQLWAQSRLENRSP*PANSVF Trigger: GAAGACAGAGTTTGCTGGCAAGGGGCTGCGGTTCTC...GAGGCGTGACTGGGCCCACAGCTGAGCACTGGGACCTTCAAAGAGCTCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155781.2 ENSMUST00000229120.2 |
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| CDS TCA 90 bp | GGTGGTTCTGGATCGTCTCAGGGTCAATTTTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAAACAGGCAGAGGATGCGCTCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: GGSGSSQGQFSGELA*GSRPRQTGRGCALS Trigger: GGAAAGAGCGCATCCTCTGCCTGTTTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATTGACCCTGAGACGATCCAGAACCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS GCA 90 bp | TCAGAGCCACCCACCACGCCGATCTGTACCCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCAGGGTCAATTTTCTGGCGAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SEPPTTPICTLLRSF*RKADTSGSIFWRAG Trigger: GCCAGCTCGCCAGAAAATTGACCCTGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAGGGTACAGATCGGCGTGGTGGGTGGCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023112.12 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS GCA 90 bp | TCTCCTTCTTGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCGAGACGTTCAGCATGCCATTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: SPSCPVPRTRSSPPG*SCGQWARRSACHSG Trigger: TCCGGAATGGCATGCTGAACGTCTCGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGAAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS CCA 90 bp | CAGAAGTTGATCAAGTCCTGCAGGAGCTCCTCCCCCAGGTGGTTCTaGATCGTCTCAGGGTCAATTTTCTGGCGAGCTGGCGTGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QKLIKSCRSSSPRWF*IVSGSIFWRAGVRV Trigger: GACCCTCACGCCAGCTCGCCAGAAAATTGACCCTGAGACGATCCAGAACCACCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS CCA 90 bp | CTAAGGCAGAAGTTGATCAAGTCCTGCAGGAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTCAGGGTCAATTTTCTGGCGAGCTGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: LRQKLIKSCRSSSPR*FWIVSGSIFWRAGV Trigger: CACGCCAGCTCGCCAGAAAATTGACCCTGAGACGATCCAGAACCACCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTTCTGCCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS-3UTR CAA 90 bp | CACAGGATGCTACGTGTTGGGCCAGTGGGATGGGAACCGTGGCACCCAATGGTTTTCTGGATCGTCTGTTaGGAGAGTAGCCGTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: HRMLRVGPVGWEPWHPMVFWIVC*ESSRPC Trigger: ACACGGACGGCTACTCTCCAAACAGACGATCCAGAA...AACCATTGGGTGCCACGGTTCCCATCCCACTGGCCCAACACGTAGCATCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023112.12 |
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| CDS-3UTR CAA 90 bp | AGTCCGGGGGTCCGCATAGATCTCAAAGTCATTCCCGCCAGGACTGGTCTCATTTTCTGGATCGTCTGTTaGGAGAGTAGCCGTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SPGVRIDLKVIPARTGLIFWIVC*ESSRPC Trigger: ACACGGACGGCTACTCTCCAAACAGACGATCCAGAA...AATGAGACCAGTCCTGGCGGGAATGACTTTGAGATCTATGCGGACCCCCGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS CCA 90 bp | CTAAGGCAGAAGTTGATCAAGTCCTGCAGGAGCTCCTCCCCCAGGTaGTTCTGGATCGTCTGTTTGGAGAGTAGCCGTCCGTGTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: LRQKLIKSCRSSSPR*FWIVCLESSRPCLY Trigger: GTATAAACACGGACGGCTACTCTCCAAACAGACGATCCAGAACCACCTGGGGGAGGAGCTCCTGCAGGACTTGATCAACTTCTGCCTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023112.12 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS-3UTR CAA 90 bp | AACTCCTCCTCCAAACCCACTTTACTGACGAGAAAGCAAAGCTCAGAGTGGCCGTTCTGGATCGTCTGTTaGGAGAGTAGCCGTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: NSSSKPTLLTRKQSSEWPFWIVC*ESSRPC Trigger: ACACGGACGGCTACTCTCCAAACAGACGATCCAGAA...CGGCCACTCTGAGCTTTGCTTTCTCGTCAGTAAAGTGGGTTTGGAGGAGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230229.2 |
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| CDS TCA 90 bp | CAAAGTCATTCCCGCCAGGACTGGTCTCATTTCCAAAGAAGTGGATaGTGTCAAAGCTGTCTTCATCCAGGCTGTCCAGGCAGTAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: QSHSRQDWSHFQRSG*CQSCLHPGCPGSSA Trigger: AGCGCTACTGCCTGGACAGCCTGGATGAAGACAGCTTTGACATCATCCACTTCTTTGGAAATGAGACCAGTCCTGGCGGGAATGACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 |
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| CDS GCA 72 bp | GATGCGCTCTTTCCTGCGGGCGCCCTCGACGGCGACTaGCATGGCTGTAGCTCCGCGCGCCAAGCGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: DALFPAGALDGD*HGCSSARQALS Trigger: CGACAGCGCTTGGCGCGCGGAGCTACAGCCATGGCAGTCGCCGTCGAGGGCGCCCGCAGGAAAGAGCGCATC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS CAA 90 bp | AGGAAGCTGGCACGGCGACACAGTGACGCTGAGGCCAGTCTGGGCTaGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RKLARRHSDAEASLG*SSSENSILSSRVQL Trigger: CAGCTGCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGCCCAGACTGGCCTCAGCGTCACTGTGTCGCCGTGCCAGCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS CAA 72 bp | GCACGGCGACACAGTGACGCTGAGGCCAGTCTGGGCTaGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ARRHSDAEASLG*SSSENSILSSR Trigger: CCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACAAGCCCAGACTGGCCTCAGCGTCACTGTGTCGCCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS GCA 72 bp | TGTCCAGTTCCGAGAACTCGATCCTCTCCTCCAGGGTaGAGCTGCGGCCAATGGGCGAGACGTTCAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: CPVPRTRSSPPG*SCGQWARRSAC Trigger: GCATGCTGAACGTCTCGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGATCGAGTTCTCGGAACTGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS CCA 72 bp | AGCTGGCACGGCGACACAGTGACGCTGAGGCCAGTCTaGGCTTGTCCAGTTCCGAGAACTCGATCCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SWHGDTVTLRPV*ACPVPRTRSSP Trigger: AGGAGAGGATCGAGTTCTCGGAACTGGACAAGCCCAGACTGGCCTCAGCGTCACTGTGTCGCCGTGCCAGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229120.2 |
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| CDS TCA 72 bp | CCGATACCTCAGGGTCAATTTTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAAACAGGCAGAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: PIPQGQFSGELA*GSRPRQTGRGC Trigger: GCATCCTCTGCCTGTTTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATTGACCCTGAGGTATCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023112.12 ENSMUST00000155781.2 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS TCA 72 bp | GGATCGTCTCAGGGTCAATTTTCTGGCGAGCTGGCGTaGGGGTCCCGTCCACGTCAAACAGGCAGAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GSSQGQFSGELA*GSRPRQTGRGC Trigger: GCATCCTCTGCCTGTTTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATTGACCCTGAGACGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS CCA 72 bp | ACTCGATCCTCTCCTCCAGGGTGCAGCTGCGGCCAATaGGCGAGACGTTCAGCATGCCATTCCGGAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: TRSSPPGCSCGQ*ARRSACHSGTQ Trigger: TTGAGTTCCGGAATGGCATGCTGAACGTCTCGCCCATTGGCCGCAGCTGCACCCTGGAGGAGAGGATCGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023112.12 ENSMUST00000071462.7 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS CCA 72 bp | CCCAGGTGGTTCTGGATCGTCTCAGGGTCAATTTTCTaGCGAGCTGGCGTGAGGGTCCCGTCCACGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PRWFWIVSGSIF*RAGVRVPSTSN Trigger: GTTTGACGTGGACGGGACCCTCACGCCAGCTCGCCAGAAAATTGACCCTGAGACGATCCAGAACCACCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071462.7 |
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| CDS GCA 72 bp | AGTAGTCAGAGCCACCCACCACGCCGATCTGTACCCTaGTTCGTAGCTTCTGCAGGAAGGCCGATACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSQSHPPRRSVP*FVASAGRPIPQ Trigger: CTGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAGGGTACAGATCGGCGTGGTGGGTGGCTCTGACTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023112.12 ENSMUST00000229120.2 ENSMUST00000230229.2 |
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| CDS GCA 72 bp | TCCTCTCCTCCAGGGTGCAGCCTGCTTCGTAGCTTCTaGAGGAAGGCCGATACCTCAGGGTCAATTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPPGCSLLRSF*RKADTSGSIFW Trigger: CCAGAAAATTGACCCTGAGGTATCGGCCTTCCTGCAGAAGCTACGAAGCAGGCTGCACCCTGGAGGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155781.2 |
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