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Pregenerated sensors for PMFBP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031727

Ensembl transcript IDs: ENSMUST00000034162.8

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCTTGTTGTTTGTATCTTTATTTCAGAGTCTGGGCCCGGAGGCTaGGGGGAGTGGGGTCTTACAACTCTACTTCAGGAGGTAGACAAA +
Preference number: 1 (lower is better)
Translates to: GLVVCIFISESGPGG*GEWGLTTLLQEVDK
Trigger: TTTGTCTACCTCCTGAAGTAGAGTTGTAAGACCCCACTCCCCCCAGCCTCCGGGCCCAGACTCTGAAATAAAGATACAAACAACAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
3UTR TCA 72 bp CCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTaGAAACGTGTAGCAGTGACGCTTTGGGTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: PVKKEGWGLNVL*KRVAVTLWVKS
Trigger: GCTCTTCACCCAAAGCGTCACTGCTACACGTTTTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
3UTR CCA 72 bp GTTTGTATCTTTATTTCAGAGTCTGGGCCCGGAGGCTaGGGGGAGTGGGGTCTTACAACTCTACTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: VCIFISESGPGG*GEWGLTTLLQE
Trigger: CTCCTGAAGTAGAGTTGTAAGACCCCACTCCCCCCAGCCTCCGGGCCCAGACTCTGAAATAAAGATACAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
3UTR TCA 72 bp GCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTaGTGGACCACTGTAGGAGCTGGTTCCGGTCAAGAA +
Preference number: 3 (lower is better)
Translates to: AKHNFLQTRQGP*WTTVGAGSGQE
Trigger: TTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACCTGCTGGCAGAGAGGTaGGCTTCCTCCTTACTCTGG +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDLLAER*ASSLLW
Trigger: CCAGAGTAAGGAGGAAGCGCACCTCTCTGCCAGCAG...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACGAGCATCCTCTAGGCTaGTGGCAGAGAGGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDEHPLG*WQRGAL
Trigger: AAGCGCACCTCTCTGCCAGCAGCCTAGAGGATGCTC...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACCTCTGGTGCTGCCTCTaGCACTGCAACACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDLWCCL*HCNTWL
Trigger: CAACCAGGTGTTGCAGTGGCAGAGGCAGCACCAGAG...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCCGGAACTCCAGTTCCTaGTGGAGGGTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSRNSSS*WRVSSF
Trigger: GAAGCTGCTGACCCTCCAGCAGGAACTGGAGTTCCG...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCAGGTCACTCTGGTGCTaGCTCTGCCACTGCAACACC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSRSLWC*LCHCNT
Trigger: GGTGTTGCAGTGGCAGAGGCAGCACCAGAGTGACCT...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATGTGTCAGGTCGTCCTaGCAGTTGCCCGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSCVRSS*QLPDFR
Trigger: GCGGAAGTCGGGCAACTGCCAGGACGACCTGACACA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTGGTACTCCTCCACGTaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCACCTCTTGCTCGCTCTaGTGTTGGAAGCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSTSCSL*CWKPCS
Trigger: ACTGCAGGGCTTCCAACAGCAGAGCGAGCAAGAGGT...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCCAGGCTCTTTGTCTCTaGGGTTGCCTGAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSQALCL*GCLSEL
Trigger: AAGCTCACTCAGGCAACCTCAGAGACAAAGAGCCTG...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCAAGGCAAGCTGCTCTTaGGCCAGATGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSKASCS*ARWSFS
Trigger: GGAGAAACTCCATCTGGCGCAAGAGCAGCTTGCCTT...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCACAGCTTCCAGCTCCATaGGCAGGTCCTTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSQLPAP*AGPSQG
Trigger: ACCTTGTGAAGGACCTGCGCATGGAGCTGGAAGCTG...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCGACTCTGTGTACTGTTaGTGCAGATCTTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSDSVYC*CRSCSR
Trigger: CCGGCTGCAAGATCTGCAGCAACAGTACACAGAGTC...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACAGCTCCCTTTGCTTTTaGTCAGAGACTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDSSLCF*SETWVL
Trigger: CAGCACCCAAGTCTCTGAGCAAAAGCAAAGGGAGCT...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCATTCTCCCGGTGGTaGCTGCAGGTTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSFSRW*LQVSLG
Trigger: CCCCAAAGAAACCTGCAGGCACCACCGGGAGAATGA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCAACTCCAGTTCCTGCTaGAGGGTCAGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSNSSSC*RVSSFF
Trigger: GAAGAAGCTGCTGACCCTCCAGCAGGAACTGGAGTT...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGGGGATGCCGGTGGGTaGCTGTGTAGGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEGDAGG*LCRKQT
Trigger: AGTTTGCTTCCTACACAGCCACCCACCGGCATCCCC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACCTTTGCCTAGCTTCTTaGAGGCTGGTGTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDLCLAS*RLVSSS
Trigger: AGAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAG...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATGCCACTGCAACACCTaGTTGCTCATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSCHCNT*LLISSS
Trigger: GCTGGAGGAGATGAGCAACCAGGTGTTGCAGTGGCA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACAGGCTCCAGTTTGTTTaGGGGAAAGGCCTTGACACA +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDRLQFV*GKGLDT
Trigger: TGTGTCAAGGCCTTTCCCCCAAACAAACTGGAGCCT...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGAGGAGCCTGAGGAGTaGGGTAACCCCATGTACTTG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEEEPEE*GNPMYL
Trigger: CAAGTACATGGGGTTACCTCACTCCTCAGGCTCCTC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATGCAAGGTCTTCCCCTaGCTCTTGCAGACATCGTGG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSECKVFP*LLQTSW
Trigger: CCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACAGCTCCTGTAACCGTTaGCTGTTGTGTTTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDSSCNR*LLCFRS
Trigger: GGAACGAAAACACAACAGGCAACGGTTACAGGAGCT...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCCGCGTTGAGCTCTTaGATGACTTTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSALSS*MTFWEE
Trigger: CTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCATCCAGTGTCTTCTaGAGCAGCGACTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSSSSVF*SSDFSF
Trigger: GAAGGAAAAGTCGCTGCTTCAGAAGACACTGGATGA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGTGTCTGCAGAATCATaGTGGAATCCTTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEVSAES*WNPSGG
Trigger: CCCGCCAGAAGGATTCCATCATGATTCTGCAGACAC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTGCCTGAGATGGTATTaGTTATTGACCCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSCLRWY*LLTRKS
Trigger: GGACTTCCGGGTCAATAAGCAATACCATCTCAGGCA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCAGCTTCTTCTTCAGTTaGTGGAGTTGCCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSSFFFS*WSCLRW
Trigger: CCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCT...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTCTGAGGCTGTTCTaGACCTGCATCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSSLRLF*TCIRFF
Trigger: GAAGAATCTGATGCAGGTGCAGAACAGCCTCAGAGA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACCGACTTTTCCTTCTCTaGATTCGAAAGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDRLFLL*IRKPSL
Trigger: CAGAGAAGGCTTTCGAATGCAGAGAAGGAAAAGTCG...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATTCGAAAGCCTTCTCTaGCCTTCAGAGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSFESLL*PSESSE
Trigger: CTCGGAACTCTCTGAAGGCCAGAGAAGGCTTTCGAA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTGTTCAGAAACCTTTTaGCAGACTTCAGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSCSETF*QTSDSR
Trigger: GCGACTGTCTGAAGTCTGGCAAAAGGTTTCTGAACA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCGAATCCAGCTGTGTCTaGAGAATCATGATGGAATCC +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSESSCV*RIMMES
Trigger: GGATTCCATCATGATTCTGCAGACACAGCTGGATTC...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCCTCTTGCAGACATCGTaGAGATTCTTGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSLLQTS*RFLMSS
Trigger: ACTGGACATCAAGAATCTCCACGATGTCTGCAAGAG...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGATGGTATTGCTTATTaGCCCGGAAGTCCATCTGGT +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEDGIAY*PGSPSG
Trigger: ACCAGATGGACTTCCGGGTCAATAAGCAATACCATC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTTATGCAACTGGCTCTaGAGATCCTTAATGACCTCT +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSLCNWL*RSLMTS
Trigger: AGAGGTCATTAAGGATCTGCAGAGCCAGTTGCATAA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCCATTCTTCAGTCCCTTaGCAGTTCGTAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSHSSVP*QFVILL
Trigger: AAGGAGAATTACGAACTGCCAAGGGACTGAAGAATG...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTCCACGTGCAGGCACTaGCTGTCTTTCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLSTCRH*LSFCSC
Trigger: GCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGA...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTTCCCAACTTCTCATTaGCAATCTTCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSFPTSH*QSSAPL
Trigger: CAAAGGAGCAGAAGATTGCCAATGAGAAGTTGGGAA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGTCTTCACAGTCTTCTaGGGAGGTAGGGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPVFTVF*GGRGMP
Trigger: CGGCATCCCCCTACCTCCTCAGAAGACTGTGAAGAC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCATGTCCTTCATaGTCTTTTTCTTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDSSCPS*SFSSVL
Trigger: CAGAACAGAAGAAAAAGATCATGAAGGACATGATGA...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATTCTGCTCTTGCAGGTaGTTCAGGATCTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEFCSCR*FRIFVM
Trigger: CATCACAAAGATCCTGAAGCACCTGCAAGAGCAGAA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCACTGGCTGTCTTTCTaGTCTTGCAGGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLHWLSF*SCRCFR
Trigger: CCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGCTCAGAGACTTGGGTaGTGTGAAATAGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEAQRLG*CEIAHL
Trigger: TAGATGAGCTATTTCACAGCACCCAAGTCTCTGAGC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTTAAGGTCACTCTGGTaGTGCCTCTGCCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLLRSLW*CLCHCN
Trigger: GTTGCAGTGGCAGAGGCAGCACCAGAGTGACCTTAA...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATCATTGGCAATCTTCTaGTCCTTTGCCCATTGTTCC +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSESLAIF*SFAHCS
Trigger: GGAACAATGGGCAAAGGAGCAGAAGATTGCCAATGA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTCCTCCACGCAGAGCTaGTTCTCTTGCAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLSSTQS*FSCKVF
Trigger: GAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGA...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATTCTTCTTCAGTTGCTaGAGTTGCCTGAGATGGTAT +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSFFFSC*SCLRWY
Trigger: ATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATTATTCCGAAGCTCCTaGATTAGGTCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSLFRSS*IRSSCS
Trigger: TGAACAGGATGACCTAATCCAGGAGCTTCGGAATAA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAACAGTTCTTCTCTTTCTaGATAGCCGAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEQFFSF*IAESSC
Trigger: ACAGCTGGATTCGGCTATCCAGAAAGAGAAGAACTG...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTCTGTGTACTGTTGCTaGAGATCTTGCAGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLSVYCC*RSCSRY
Trigger: GTACCGGCTGCAAGATCTGCAGCAACAGTACACAGA...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGAGGCTGTTCTGCACCTaGATCAGATTCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLRLFCT*IRFFSS
Trigger: GCTGGAGAAGAATCTGATGCAGGTGCAGAACAGCCT...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATTACTCTTCTTCAGTTaGTCTCGTTTCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSELLFFS*SRFSSK
Trigger: CTTGGAGGAGAAACGAGAGCAACTGAAGAAGAGTAA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGCAATGTATTTAACCTaGTCTCTCAGCTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEAMYLT*SLSLFP
Trigger: GGGAAACAAGCTGAGAGAGCAGGTTAAATACATTGC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATGGTGTCCAGTTCTTTaGTTGTACACTGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEWCPVL*LYTVAS
Trigger: AGAAGCTACAGTGTACAACCAAAGAACTGGACACCA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAATGTAGCTTATGCAACTaGCTCTGCAGATCCTTAATG +
Preference number: 4 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSECSLCN*LCRSLM
Trigger: CATTAAGGATCTGCAGAGCCAGTTGCATAAGCTACA...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCTTGGATGACTTTCTaGGAGGAGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSWMTF*EELYLL
Trigger: CAACAAATACAACTCCTCCCAGAAAGTCATCCAAGA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGCCTGCAGGTTTCTTTaGGGGTTAGCTTTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPACRFL*GLALQA
Trigger: CGCCTGCAAAGCTAACCCCCAAAGAAACCTGCAGGC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCATTGTTCTCAGGGTCCTaGCCAATGAGTCCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPLFSGS*PMSPLS
Trigger: ACTCAGCGGACTCATTGGTCAGGACCCTGAGAACAA...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACTGAGGTTGCCTGAGTaGGCTTCTCCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKLRLPE*ASPGPV
Trigger: CACAGGCCCTGGAGAAGCTCACTCAGGCAACCTCAG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAGTCTCTGAGGTTGCCTaGGTGAGCTTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKVSEVA*VSFSRA
Trigger: GGCCCTGGAGAAGCTCACTCAGGCAACCTCAGAGAC...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAAGAAGGTCGGAAGTCTaGTTCTCCAGGATCGACTGG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPRRSEV*FSRIDW
Trigger: CCAGTCGATCCTGGAGAAGCAGACTTCCGACCTTCT...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGATCTCTTCCTCCAGTaGCTTCTCCTGTTCCTTACT +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLDLFLQ*LLLFLT
Trigger: AGTAAGGAACAGGAGAAGGCACTGGAGGAAGAGATC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCATCCTTCACAAGGTTCTaGTACTCCTCCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPSFTRF*YSSTCR
Trigger: CCTGCACGTGGAGGAGTACCAGAACCTTGTGAAGGA...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGCTTCAGGATCTTTGTaGTGTCTTCACAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLASGSL*CLHSLL
Trigger: CAGAAGACTGTGAAGACATCACAAAGATCCTGAAGC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCTTTTTCTTCTGTTCTaGCACAGCTTCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLLFLLF*HSFQLH
Trigger: ATGGAGCTGGAAGCTGTGTCAGAACAGAAGAAAAAG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGATTTTGGATGTGCTTTaGCTAGCTTCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLILDVL*LASWRL
Trigger: CAGCCTCCAAGAAGCTAGGCAAAGCACATCCAAAAT...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACATCCTCTAGGCTGCTaGCAGAGAGGTGCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKHPLGC*QRGALP
Trigger: AGGAAGCGCACCTCTCTGCCAGCAGCCTAGAGGATG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACTGCCTCTTTCTCTCTaGGGCTGTTCTGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKLPLSL*GCSAPA
Trigger: TGCAGGTGCAGAACAGCCTCAGAGAGAAAGAGGCAG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGAGACTTGGGTGCTGTaGAATAGCTCATCTATCTTT +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLETWVL*NSSSIF
Trigger: AAAGATAGATGAGCTATTTCACAGCACCCAAGTCTC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR TCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAAGGAGTTGTATTTGTTaGGAGAGGAGTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPRSCIC*ERSPGV
Trigger: CACACCTGGACTCCTCTCTCAACAAATACAACTCCT...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAATCTCCCGGTGGTGCCTaGAGGTTTCTTTGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKSPGGA*RFLWGL
Trigger: TAACCCCCAAAGAAACCTGCAGGCACCACCGGGAGA...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGCTTCTTGTTGTGGTTaGCTTTCAGCATCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPASCCG*LSASLP
Trigger: AGGAAGCGATGCTGAAAGCCAACCACAACAAGAAGC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGCTTGCTTCTTGTTGTaGTTGGCTTTCAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPACFLL*LAFSIA
Trigger: AGCGATGCTGAAAGCCAACCACAACAAGAAGCAAGC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCCTCTAGCTTCCTTATaGAGTTTGTTAGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLPLASL*SLLAPF
Trigger: AAAGGGAGCTAACAAACTCCATAAGGAAGCTAGAGG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAGTCGCCATTTCCTCCTaGAATTCTCGGAGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKVAISS*NSRSCD
Trigger: GTCGCAGCTCCGAGAATTCCAGGAGGAAATGGCGAC...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCATGGACCATTACATTGTaGAGGTGGTCCTTTTCGCCA +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPWTITL*RWSFSP
Trigger: TGGCGAAAAGGACCACCTCCACAATGTAATGGTCCA...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCATAGCTTTCCCTTTTaGGAAGGCTCCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLHSFPF*EGSSLF
Trigger: AAACAAACTGGAGCCTTCCCAAAAGGGAAAGCTATG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCATCCAGCATCTTCACTTaGCACTCCAGTAACTCTATG +
Preference number: 4 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPSSIFT*HSSNSM
Trigger: CATAGAGTTACTGGAGTGCCAAGTGAAGATGCTGGA...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAATCTTAAGGTCACTCTaGTGCTGCCTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKILRSL*CCLCHC
Trigger: GCAGTGGCAGAGGCAGCACCAGAGTGACCTTAAGAT...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAATGACCTCTTCCTTCTaGTTGTCCTGGAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKMTSSF*LSWRRQ
Trigger: CTGCCTTCTCCAGGACAAGCAGAAGGAAGAGGTCAT...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAATTCTTGTCAAAGTTGTaGACCTCTTGCTCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKFLSKL*TSCSLC
Trigger: GCAGAGCGAGCAAGAGGTGCACAACTTTGACAAGAA...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACTGTCTTTCTGCTCTTaGAGGTGCTTCAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKLSFCS*RCFRIF
Trigger: AAAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR GCA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAAATCTTCTGCTCCTTTaGCCATTGTTCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKNLLLL*PLFHVV
Trigger: AACAACGTGGAACAATGGGCAAAGGAGCAGAAGATT...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp ACCTTCAGCTGCTCCCTGGCCTCCTCGAGGCTATCCTTGAGCTTCTaGATCTCGGCCCGCAGGGCCTCGCAGTCTATTTTGGATGTGCTT +
Preference number: 5 (lower is better)
Translates to: TFSCSLASSRLSLSF*ISARRASQSILDVL
Trigger: AAGCACATCCAAAATAGACTGCGAGGCCCTGCGGGCCGAGATCCAGAAGCTCAAGGATAGCCTCGAGGAGGCCAGGGAGCAGCTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 90 bp CCTCTCCTGGGTCTGTTGCAAGGAGCGATTCAGGCTCTTTGTCTCTaGGGTTGCCTGAGTGAGCTTCTCCAGGGCCTGTGTCAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: PLLGLLQGAIQALCL*GCLSELLQGLCQVV
Trigger: GACGACCTGACACAGGCCCTGGAGAAGCTCACTCAGGCAACCTCAGAGACAAAGAGCCTGAATCGCTCCTTGCAACAGACCCAGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 90 bp GCAGCCGGTACTGCAGGAAGACAGTCTCCTTGTCCTTCTTCTCGATaGCGCAGGACGTCTCTTCCCGCAGCCCATGTAGATCTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: AAGTAGRQSPCPSSR*RRTSLPAAHVDLAP
Trigger: TGGAGCTAGATCTACATGGGCTGCGGGAAGAGACGTCCTGCGTCATCGAGAAGAAGGACAAGGAGACTGTCTTCCTGCAGTACCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp AGCTCCATGCGCAGGTCCTTCACAAGGTTCTGGTACTCCTCCACGTaGAGGCACTGGCTGTCTTTCTGCTCTTGCAGGTGCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: SSMRRSFTRFWYSST*RHWLSFCSCRCFRI
Trigger: GATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGTGAAGGACCTGCGCATGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCGTCTTCCCCTGCCTCTaGCAGACATCGTGGAGATTC +
Preference number: 5 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSVFPCL*QTSWRF
Trigger: GAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGAC...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTTTGGGGGAAAGGCCTaGACACAGATCCTCGGGTTC +
Preference number: 5 (lower is better)
Translates to: DHCRSWFRSRKRGGDSMSFGGKA*TQILGF
Trigger: GAACCCGAGGATCTGTGTCAAGGCCTTTCCCCCAAA...GGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp GGTCGCCATTTCCTCCTGGAATTCTCGGAGCTGCGACTCCTTAGCTaGCAACATCTTAAGGTCACTCTGGTGCTGCCTCTGCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: GRHFLLEFSELRLLS*QHLKVTLVLPLPLQ
Trigger: TTGCAGTGGCAGAGGCAGCACCAGAGTGACCTTAAGATGTTGGCAGCTAAGGAGTCGCAGCTCCGAGAATTCCAGGAGGAAATGGCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAGCAGAGCTGGTTCTCTaGCAAGGTCTTCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSEAELVL*QGLPLP
Trigger: AGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGC...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTTGTCTTGGAGCAACTaGTCCTTCTTCAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDLSWSN*SFFRDS
Trigger: GCTGTCCCTGAAGAAGGACAAGTTGCTCCAAGACAA...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAGCTTTGCCTAGCTTCTaGGAGGCTGGTGTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSALPSF*EAGVQF
Trigger: GAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAGC...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACAAAGTTGTGCACCTCTaGCTCGCTCTGCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDKVVHL*LALLLE
Trigger: TTCCAACAGCAGAGCGAGCAAGAGGTGCACAACTTT...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCACACTGCAACACCTGGTaGCTCATCTCCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSHCNTW*LISSSF
Trigger: GAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTG...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATGGGAAGGCTCCAGTTaGTTTGGGGGAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSWEGSS*FGGKAL
Trigger: CAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TGGTTGGCTTTCAGCATCGCTTCCTCCACGCAGAGCTGGTTCTCTTaGAAGGTCTTCCCCTGCCTCTTGCAGACATCGTGGAGATTCTTG +
Preference number: 5 (lower is better)
Translates to: WLAFSIASSTQSWFS*KVFPCLLQTSWRFL
Trigger: CAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAAAGCCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp TTCTTGTTGTGGTTGGCTTTCAGCATCGCTTCCTCCACGCAGAGCTaGTTCTCTTGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTGG +
Preference number: 5 (lower is better)
Translates to: FLLWLAFSIASSTQS*FSCKVFPCLLQTSW
Trigger: CCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAAAGCCAACCACAACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp CGCAGGTCCTTCACAAGGTTCTGGTACTCCTCCACGTGCAGGCACTaGCTGTCTTTCTGCTCTTGCAGGTGCTTCAGGATCTTTGTGATG +
Preference number: 5 (lower is better)
Translates to: RRSFTRFWYSSTCRH*LSFCSCRCFRIFVM
Trigger: CATCACAAAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGTGAAGGACCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCCAGTAACTCTATGTaGCTCAGGGAAGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDSSNSM*LREVWY
Trigger: GTACCAGACTTCCCTGAGCAACATAGAGTTACTGGA...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 90 bp CTCTTGCAGGTGCTTCAGGATCTTTGTGATGTCTTCACAGTCTTCTaGGGAGGTAGGGGGATGCCGGTGGGTGGCTGTGTAGGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: LLQVLQDLCDVFTVF*GGRGMPVGGCVGSK
Trigger: TTTGCTTCCTACACAGCCACCCACCGGCATCCCCCTACCTCCTCAGAAGACTGTGAAGACATCACAAAGATCCTGAAGCACCTGCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp ATCGCTTCCTCCACGCAGAGCTGGTTCTCTTGCAAGGTCTTCCCCTaGCTCTTGCAGACATCGTGGAGATTCTTGATGTCCAGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: IASSTQSWFSCKVFP*LLQTSWRFLMSSCR
Trigger: CCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp CGGAACTCCAGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTTaGTGGAGTTGCCTGAGATGGTATTGCTTATTGACCCGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RNSSSCWRVSSFFFS*WSCLRWYCLLTRKS
Trigger: GGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACTGGAGTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp TTTGCCCATTGTTCCACGTTGTTCATAATCTGGTCATTCTCCCGGTaGTGCCTGCAGGTTTCTTTGGGGGTTAGCTTTGCAGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: FAHCSTLFIIWSFSR*CLQVSLGVSFAGGE
Trigger: CTCCCCGCCTGCAAAGCTAACCCCCAAAGAAACCTGCAGGCACCACCGGGAGAATGACCAGATTATGAACAACGTGGAACAATGGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp GCCTTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTGTAGGCTCAAGAGCTaGCTGTTTAGATTGCTGACA +
Preference number: 5 (lower is better)
Translates to: ALMDHCRSWFRSRKRGGDCRLKS*LFRLLT
Trigger: TGTCAGCAATCTAAACAGCAAGCTCTTGAGCCTACA...GTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCCAGGACCAAAGAGTaGCTGCAGGCCAGTTTATTC +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSRTKE*LQASLF
Trigger: GAATAAACTGGCCTGCAGCAACTCTTTGGTCCTGGA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATGGGAGGAGTTGTATTaGTTGAGAGAGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSWEELY*LREESR
Trigger: CCTGGACTCCTCTCTCAACAAATACAACTCCTCCCA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATCGTTCTTCAGCTTTTaGTTCTCCTGCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSFFSF*FSCCRW
Trigger: CCACCTGCAGCAGGAGAACAAAAAGCTGAAGAACGA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp GTTCCCCCTCCAGCATCTTCACTTGGCACTCCAGTAACTCTATGTTaGTCAGGGAAGTCTGGTACTTGTCCCTGTAGAGGTTTAGGCTCC +
Preference number: 5 (lower is better)
Translates to: VPPPASSLGTPVTLC*SGKSGTCPCRGLGS
Trigger: GGAGCCTAAACCTCTACAGGGACAAGTACCAGACTTCCCTGAGCAACATAGAGTTACTGGAGTGCCAAGTGAAGATGCTGGAGGGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp CGCAGGGCCTCGCAGTCTATTTTGGATGTGCTTTGCCTAGCTTCTTaGAGGCTGGTGTCCAGTTCTTTGGTTGTACACTGTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRASQSILDVLCLAS*RLVSSSLVVHCSFS
Trigger: GGAGAAGCTACAGTGTACAACCAAAGAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAGCACATCCAAAATAGACTGCGAGGCCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp GGAGAAGGCAGTTCTCGATTTTCCGATGAGCATCCTCTAGGCTGCTaGCAGAGAGGTGCGCTTCCTCCTTACTCTGGGTTAGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: GEGSSRFSDEHPLGC*QRGALPPYSGLDSD
Trigger: ATCAGAATCTAACCCAGAGTAAGGAGGAAGCGCACCTCTCTGCCAGCAGCCTAGAGGATGCTCATCGGAAAATCGAGAACTGCCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp TCCTTCTGGCGGGCTATCTCCGCGTTGAGCTCTTGGATGACTTTCTaGGAGGAGTTGTATTTGTTGAGAGAGGAGTCCAGGTGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SFWRAISALSSWMTF*EELYLLREESRCEE
Trigger: TTCCTCACACCTGGACTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAAGCTTGCTGTTTAGATaGCTGACATCCCTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSSLLFR*LTSLSL
Trigger: GAGAGACAGGGATGTCAGCAATCTAAACAGCAAGCT...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCCTCTCCTGGGTCTGTaGCAAGGAGCGATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLPLLGL*QGAIQA
Trigger: AGCCTGAATCGCTCCTTGCAACAGACCCAGGAGAGG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATCTCCTCCAGCTTCTaGTCAAAGTTGTGCACCTCT +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSISSSF*SKLCTS
Trigger: AGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGAT...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCAATGTCCTCTGAAAGGTGGACCATTACATaGTGGAGGTGGTCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: CRSWFRSRKRGGDSMSSERWTIT*WRWSFS
Trigger: CGAAAAGGACCACCTCCACAATGTAATGGTCCACCT...TTCAGAGGACATTGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp AGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTGGAGTTaGCTGAGATGGTATTGCTTATTGACCCGGAAGTCCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SSCWRVSSFFFSCWS*LRWYCLLTRKSIWL
Trigger: CAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp ACAAGGTTCTGGTACTCCTCCACGTGCAGGCACTGGCTGTCTTTCTaGTCTTGCAGGTGCTTCAGGATCTTTGTGATGTCTTCACAGTCT +
Preference number: 5 (lower is better)
Translates to: TRFWYSSTCRHWLSF*SCRCFRIFVMSSQS
Trigger: AGACTGTGAAGACATCACAAAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp AACTTGTCCTTCTTCAGGGACAGCTTCTGTGACTCTGTGTACTGTTaGTGCAGATCTTGCAGCCGGTACTGCAGGAAGACAGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: NLSFFRDSFCDSVYC*CRSCSRYCRKTVSL
Trigger: CAAGGAGACTGTCTTCCTGCAGTACCGGCTGCAAGATCTGCAGCAACAGTACACAGAGTCACAGAAGCTGTCCCTGAAGAAGGACAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TTGAGAGAGGAGTCCAGGTGTGAGGAACGGGAGGTCAACTCAGCCTaGAGGTTCTCCTTCTCTTCATCCAGCTTTCTCAAATGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LREESRCEEREVNSA*RFSFSSSSFLKCSF
Trigger: GAAGGAACATTTGAGAAAGCTGGATGAAGAGAAGGAGAACCTGCAGGCTGAGTTGACCTCCCGTTCCTCACACCTGGACTCCTCTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TTAGCTGCCAACATCTTAAGGTCACTCTGGTGCTGCCTCTGCCACTaGAACACCTGGTTGCTCATCTCCTCCAGCTTCTTGTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LAANILRSLWCCLCH*NTWLLISSSFLSKL
Trigger: CAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTGGCAGAGGCAGCACCAGAGTGACCTTAAGATGTTGGCAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp AACTCCAGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTaGAGTTGCCTGAGATGGTATTGCTTATTGACCCGGAAGTCCATC +
Preference number: 5 (lower is better)
Translates to: NSSSCWRVSSFFFSC*SCLRWYCLLTRKSI
Trigger: GATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACTGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp AACATCTTAAGGTCACTCTGGTGCTGCCTCTGCCACTGCAACACCTaGTTGCTCATCTCCTCCAGCTTCTTGTCAAAGTTGTGCACCTCT +
Preference number: 5 (lower is better)
Translates to: NILRSLWCCLCHCNT*LLISSSFLSKLCTS
Trigger: AGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTGGCAGAGGCAGCACCAGAGTGACCTTAAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp GCAATCTTCTGCTCCTTTGCCCATTGTTCCACGTTGTTCATAATCTaGTCATTCTCCCGGTGGTGCCTGCAGGTTTCTTTGGGGGTTAGC +
Preference number: 5 (lower is better)
Translates to: AIFCSFAHCSTLFII*SFSRWCLQVSLGVS
Trigger: GCTAACCCCCAAAGAAACCTGCAGGCACCACCGGGAGAATGACCAGATTATGAACAACGTGGAACAATGGGCAAAGGAGCAGAAGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 90 bp CCCGCAGCCCATGTAGATCTAGCTCCAGCTTCATCATGTCCTTCATaGTCTTTTTCTTCTGTTCTGACACAGCTTCCAGCTCCATGCGCA +
Preference number: 5 (lower is better)
Translates to: PAAHVDLAPASSCPS*SFSSVLTQLPAPCA
Trigger: TGCGCATGGAGCTGGAAGCTGTGTCAGAACAGAAGAAAAAGATCATGAAGGACATGATGAAGCTGGAGCTAGATCTACATGGGCTGCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp AGCTGGTTCTCTTGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTaGAGATTCTTGATGTCCAGTTGTAGGCTCAAGAGCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SWFSCKVFPCLLQTS*RFLMSSCRLKSLLF
Trigger: AAACAGCAAGCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp TGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTGGAGTTGCCTGAGATaGTATTGCTTATTGACCCGGAAGTCCATCTGGTTGTCCGTGAAT +
Preference number: 5 (lower is better)
Translates to: WRVSSFFFSCWSCLR*YCLLTRKSIWLSVN
Trigger: ATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp ATCATGATGGAATCCTTCTGGCGGGCTATCTCCGCGTTGAGCTCTTaGATGACTTTCTGGGAGGAGTTGTATTTGTTGAGAGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: IMMESFWRAISALSS*MTFWEELYLLREES
Trigger: GGACTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGATTCCATCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGTCTGGGCTTGCTTCTaGTTGTGGTTGGCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLVWACF*LWLAFS
Trigger: GCTGAAAGCCAACCACAACAAGAAGCAAGCCCAGAC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp TTGATGGACCACTGTAGGAGCTGGTTCCGGTCAAGAAAGAGGGGTGGGGACTCATTTCCCAACTTCTCATaGGCAATCTTCTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LMDHCRSWFRSRKRGGDSFPNFS*AIFCSF
Trigger: AAAGGAGCAGAAGATTGCCAATGAGAAGTTGGGAAA...TGAGTCCCCACCCCTCTTTCTTGACCGGAACCAGCTCCTACAGTGGTCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp GTAATTTTATCAACGCCTCCTCACGCTCCAGGACCAAAGAGTTGCTaGAGGCCAGTTTATTCCGAAGCTCCTGGATTAGGTCATCCTGTT +
Preference number: 5 (lower is better)
Translates to: VILSTPPHAPGPKSC*RPVYSEAPGLGHPV
Trigger: AACAGGATGACCTAATCCAGGAGCTTCGGAATAAACTGGCCTGCAGCAACTCTTTGGTCCTGGAGCGTGAGGAGGCGTTGATAAAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp TGGAGTTGCCTGAGATGGTATTGCTTATTGACCCGGAAGTCCATCTaGTTGTCCGTGAATACTAACGTCTGGGCTTGCTTCTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: WSCLRWYCLLTRKSI*LSVNTNVWACFLLW
Trigger: CCACAACAAGAAGCAAGCCCAGACGTTAGTATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGCTGTCTTTCTGCTCTaGCAGGTGCTTCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLAVFLL*QVLQDL
Trigger: AAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAGC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp GTCAGCAGCTTCTTCTTCAGTTGCTGGAGTTGCCTGAGATGGTATTaGTTATTGACCCGGAAGTCCATCTGGTTGTCCGTGAATACTAAC +
Preference number: 5 (lower is better)
Translates to: VSSFFFSCWSCLRWY*LLTRKSIWLSVNTN
Trigger: GTTAGTATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TTTCCTTTTCGCTTCTTGTCGCAAAGCCTCGATCTCTTCCTCCAGTaGCTTCTCCTGTTCCTTACTCTTCTTCAGTTGCTCTCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: FPFRFLSQSLDLFLQ*LLLFLTLLQLLSFL
Trigger: GAGAAACGAGAGCAACTGAAGAAGAGTAAGGAACAGGAGAAGGCACTGGAGGAAGAGATCGAGGCTTTGCGACAAGAAGCGAAAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp AGCTTCTTCTCTTCTATCTCGTTCTTCAGCTTTTTGTTCTCCTGCTaGAGGTGGACCATTACATTGTGGAGGTGGTCCTTTTCGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SFFSSISFFSFLFSC*RWTITLWRWSFSPV
Trigger: GACTGGCGAAAAGGACCACCTCCACAATGTAATGGTCCACCTGCAGCAGGAGAACAAAAAGCTGAAGAACGAGATAGAAGAGAAGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 90 bp CCAAGAGCCCTTTTATCTCCAGAAGTTCCTCCTCTAGCTTCCTTATaGAGTTTGTTAGCTCCCTTTGCTTTTGCTCAGAGACTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: PRALLSPEVPPLASL*SLLAPFAFAQRLGC
Trigger: GCACCCAAGTCTCTGAGCAAAAGCAAAGGGAGCTAACAAACTCCATAAGGAAGCTAGAGGAGGAACTTCTGGAGATAAAAGGGCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCTTCAGTTGCTGGAGTaGCCTGAGATGGTATTGCTT +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLLQLLE*PEMVLL
Trigger: AAGCAATACCATCTCAGGCAACTCCAGCAACTGAAG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGGTCTCCTGATGCTCTaGAATCACGCACGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPGLLML*NHARRS
Trigger: ACTTCTCCGTGCGTGATTCAAGAGCATCAGGAGACC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGAGGAGTTGTATTTGTaGAGAGAGGAGTCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLEELYL*REESRC
Trigger: ACACCTGGACTCCTCTCTCAACAAATACAACTCCTC...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TGGAGGTGGTCCTTTTCGCCAGTCAACTTGGCAATGTATTTAACCTaGTCTCTCAGCTTGTTTCCCAACTTCTCATTGGCAATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WRWSFSPVNLAMYLT*SLSLFPNFSLAIFC
Trigger: GCAGAAGATTGCCAATGAGAAGTTGGGAAACAAGCTGAGAGAGCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAAGGACCACCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCAGCCTCGCAGTCTATTTaGGATGTGCTTTGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPASQSI*DVLCLA
Trigger: AGCTAGGCAAAGCACATCCAAAATAGACTGCGAGGC...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGCTTACTCTTCTTCAGTaGCTCTCGTTTCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLLTLLQ*LSFLLQ
Trigger: TTGGAGGAGAAACGAGAGCAACTGAAGAAGAGTAAG...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TTTAGCTTCTTCTCTTCTATCTCGTTCTTCAGCTTTTTGTTCTCCTaGTGCAGGTGGACCATTACATTGTGGAGGTGGTCCTTTTCGCCA +
Preference number: 5 (lower is better)
Translates to: FSFFSSISFFSFLFS*CRWTITLWRWSFSP
Trigger: TGGCGAAAAGGACCACCTCCACAATGTAATGGTCCACCTGCAGCAGGAGAACAAAAAGCTGAAGAACGAGATAGAAGAGAAGAAGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTTCAGAAACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPLFRNL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTTTCTGAACAG...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp AAAACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGGTGTCCAGTTCTTaGGTTGTACACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: KTQQSITSCKLDRGLDGPLVSSS*VVHCSF
Trigger: GAAGCTACAGTGTACAACCAAAGAACTGGACACCAG...TGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACGGGCTATCTCCGCGTaGAGCTCTTGGATGACTTTC +
Preference number: 5 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKRAISA*SSWMTF
Trigger: GAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACTCAGCAAAGCATAACTTCTTGCAAACTAGACAGGGGCCTTGATGGACCACTGTTTTCGCCAGTCAACTaGGCAATGTATTTAACCTGC +
Preference number: 5 (lower is better)
Translates to: TQQSITSCKLDRGLDGPLFSPVN*AMYLTC
Trigger: GCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAA...CAGTGGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TGTTTTCGTTCCTCCTCAATTTTCGAAGACTCCTTCTGTAGCTTATaGAACTGGCTCTGCAGATCCTTAATGACCTCTTCCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CFRSSSIFEDSFCSL*NWLCRSLMTSSFCL
Trigger: CAAGCAGAAGGAAGAGGTCATTAAGGATCTGCAGAGCCAGTTGCATAAGCTACAGAAGGAGTCTTCGAAAATTGAGGAGGAACGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 90 bp GAGTTTGTTAGCTCCCTTTGCTTTTGCTCAGAGACTTGGGTGCTGTaGAATAGCTCATCTATCTTTTTCTCGTCTTCATCCAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: EFVSSLCFCSETWVL*NSSSIFFSSSSSVF
Trigger: GAAGACACTGGATGAAGACGAGAAAAAGATAGATGAGCTATTTCACAGCACCCAAGTCTCTGAGCAAAAGCAAAGGGAGCTAACAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACAGCTTCTTCTTCAGTaGCTGGAGTTGCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKQLLLQ*LELPEM
Trigger: CATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAAGCTTCTTGTCAAAGTaGTGCACCTCTTGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKSFLSK*CTSCSL
Trigger: GAGCGAGCAAGAGGTGCACAACTTTGACAAGAAGCT...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 90 bp TTATGGAGTTTGTTAGCTCCCTTTGCTTTTGCTCAGAGACTTGGGTaGTGTGAAATAGCTCATCTATCTTTTTCTCGTCTTCATCCAGTG +
Preference number: 5 (lower is better)
Translates to: LWSLLAPFAFAQRLG*CEIAHLSFSRLHPV
Trigger: CACTGGATGAAGACGAGAAAAAGATAGATGAGCTATTTCACAGCACCCAAGTCTCTGAGCAAAAGCAAAGGGAGCTAACAAACTCCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAACCTCTCATCCTTGTCTaGGAGCAACTTGTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKPLILV*EQLVLL
Trigger: AAGAAGGACAAGTTGCTCCAAGACAAGGATGAGAGG...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS-3UTR CAA 90 bp ACAACTCTACTTCAGGAGGTAGACAAAACTCAGCAAAGCATAACTTCTTGCAAAACTTTCTGGGAGGAGTaGTATTTGTTGAGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TTLLQEVDKTQQSITSCKTFWEE*YLLREE
Trigger: CTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGT...TTTGCAAGAAGTTATGCTTTGCTGAGTTTTGTCTACCTCCTGAAGTAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp CCTTCAGCTGCTCCCTGGCCTCCTCGAGGCTATCCTTaGGCTTCTGGATCTCGGCCCGCAGGGCCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: PSAAPWPPRGYP*ASGSRPAGPRS
Trigger: ACTGCGAGGCCCTGCGGGCCGAGATCCAGAAGCTCAAGGATAGCCTCGAGGAGGCCAGGGAGCAGCTGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp ACCTTCAGCTGCTCCCTGGCCTCCTCGAGGCTATCCTaGAGCTTCTGGATCTCGGCCCGCAGGGCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: TFSCSLASSRLS*SFWISARRASQ
Trigger: CTGCGAGGCCCTGCGGGCCGAGATCCAGAAGCTCAAGGATAGCCTCGAGGAGGCCAGGGAGCAGCTGAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCTAGGGAGAGGATCTTGTCCCCCGCCAAGGCAAGCTaGTCTTGCGCCAGATGGAGTTTCTCCCCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: SRERILSPAKAS*SCARWSFSPVL
Trigger: GAGCACGGGGGAGAAACTCCATCTGGCGCAAGAGCAGCTTGCCTTGGCGGGGGACAAGATCCTCTCCCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp CCCATGTACTTGTGGTCCGTTTTCGGTGTCAGGTCCTaGGGTATCCCTCTCCAGCCCAGGGCACAGCATAGC +
Preference number: 6 (lower is better)
Translates to: PMYLWSVFGVRS*GIPLQPRAQHS
Trigger: GCTATGCTGTGCCCTGGGCTGGAGAGGGATACCCCAGGACCTGACACCGAAAACGGACCACAAGTACATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp GGAGAGGATCTTGTCCCCCGCCAAGGCAAGCTGCTCTaGCGCCAGATGGAGTTTCTCCCCCGTGCTCTTACT +
Preference number: 6 (lower is better)
Translates to: GEDLVPRQGKLL*RQMEFLPRALT
Trigger: AGTAAGAGCACGGGGGAGAAACTCCATCTGGCGCAAGAGCAGCTTGCCTTGGCGGGGGACAAGATCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp CAGCCCAGGGCACAGCATAGCTTTCCCTTTTGGGAAGGCTCCAGTTaGTTTGGGGGAAAGGCCTTGACACAGATCCTCGGGTTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: QPRAQHSFPFWEGSS*FGGKALTQILGFPA
Trigger: GGCCGGGAACCCGAGGATCTGTGTCAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCAAAAGGGAAAGCTATGCTGTGCCCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp GAGAGGATCTTGTCCCCCGCCAAGGCAAGCTGCTCTTaGGCCAGATGGAGTTTCTCCCCCGTGCTCTTACTA +
Preference number: 6 (lower is better)
Translates to: ERILSPAKASCS*ARWSFSPVLLL
Trigger: TAGTAAGAGCACGGGGGAGAAACTCCATCTGGCGCAAGAGCAGCTTGCCTTGGCGGGGGACAAGATCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp CGCAGGTCCTTCACAAGGTTCTGGTACTCCTCCACGTaGAGGCACTGGCTGTCTTTCTGCTCTTGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RRSFTRFWYSST*RHWLSFCSCRC
Trigger: GCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGTGAAGGACCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp GCTTCCAGCTCCATGCGCAGGTCCTTCACAAGGTTCTaGTACTCCTCCACGTGCAGGCACTGGCTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ASSSMRRSFTRF*YSSTCRHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGTGAAGGACCTGCGCATGGAGCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp GAGAGGTGCGCTTCCTCCTTACTCTGGGTTAGATTCTaGTCTGACACCTTCAGCTGCTCCCTGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ERCASSLLWVRF*SDTFSCSLASS
Trigger: CGAGGAGGCCAGGGAGCAGCTGAAGGTGTCAGATCAGAATCTAACCCAGAGTAAGGAGGAAGCGCACCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTCAGCATCGCTTCCTCCACGCAGAGCTGGTTCTCTTaGAAGGTCTTCCCCTGCCTCTTGCAGACATCGTGG +
Preference number: 6 (lower is better)
Translates to: FSIASSTQSWFS*KVFPCLLQTSW
Trigger: CCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp GGCAGTTCTCGATTTTCCGATGAGCATCCTCTAGGCTaGTGGCAGAGAGGTGCGCTTCCTCCTTACTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSSRFSDEHPLG*WQRGALPPYSG
Trigger: CCCAGAGTAAGGAGGAAGCGCACCTCTCTGCCAGCAGCCTAGAGGATGCTCATCGGAAAATCGAGAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp GCTTCTCCAGGGCCTGTGTCAGGTCGTCCTGGCAGTTaGCCGACTTCCGCACAAGTTCCTCATAAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: ASPGPVSGRPGS*PTSAQVPHKLL
Trigger: AAGAAGCTTATGAGGAACTTGTGCGGAAGTCGGGCAACTGCCAGGACGACCTGACACAGGCCCTGGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TGGTTGGCTTTCAGCATCGCTTCCTCCACGCAGAGCTaGTTCTCTTGCAAGGTCTTCCCCTGCCTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: WLAFSIASSTQS*FSCKVFPCLLQ
Trigger: CTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAAAGCCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp CCTCTCCAGCCCAGGGCACAGCATAGCTTTCCCTTTTaGGAAGGCTCCAGTTTGTTTGGGGGAAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PLQPRAQHSFPF*EGSSLFGGKAL
Trigger: CAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCAAAAGGGAAAGCTATGCTGTGCCCTGGGCTGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp TTCTGGATCTCGGCCCGCAGGGCCTCGCAGTCTATTTaGGATGTGCTTTGCCTAGCTTCTTGGAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: FWISARRASQSI*DVLCLASWRLV
Trigger: CACCAGCCTCCAAGAAGCTAGGCAAAGCACATCCAAAATAGACTGCGAGGCCCTGCGGGCCGAGATCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TGCCTCTGCCACTGCAACACCTGGTTGCTCATCTCCTCCAGCTTCTaGTCAAAGTTGTGCACCTCTTGCTCGCTCTGCTGTTGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: CLCHCNTWLLISSSF*SKLCTSCSLCCWKP
Trigger: GGGCTTCCAACAGCAGAGCGAGCAAGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTGGCAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp TGCTTGTCCTGGAGAAGGCAGTTCTCGATTTTCCGATaGGCATCCTCTAGGCTGCTGGCAGAGAGGTGCGCT +
Preference number: 6 (lower is better)
Translates to: CLSWRRQFSIFR*ASSRLLAERCA
Trigger: AGCGCACCTCTCTGCCAGCAGCCTAGAGGATGCTCATCGGAAAATCGAGAACTGCCTTCTCCAGGACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp TTTCAGCATCGCTTCCTCCACGCAGAGCTGGTTCTCTaGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTG +
Preference number: 6 (lower is better)
Translates to: FQHRFLHAELVL*QGLPLPLADIV
Trigger: CACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp GTGGTTGGCTTTCAGCATCGCTTCCTCCACGCAGAGCTGGTTCTCTaGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTGGAGATTCTT +
Preference number: 6 (lower is better)
Translates to: VVGFQHRFLHAELVL*QGLPLPLADIVEIL
Trigger: AAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGAAGCGATGCTGAAAGCCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp GTGCTTCAGGATCTTTGTGATGTCTTCACAGTCTTCTaGGGAGGTAGGGGGATGCCGGTGGGTGGCTGTGTA +
Preference number: 6 (lower is better)
Translates to: VLQDLCDVFTVF*GGRGMPVGGCV
Trigger: TACACAGCCACCCACCGGCATCCCCCTACCTCCTCAGAAGACTGTGAAGACATCACAAAGATCCTGAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp ACTGCAGGAAGACAGTCTCCTTGTCCTTCTTCTCGATaGCGCAGGACGTCTCTTCCCGCAGCCCATGTAGAT +
Preference number: 6 (lower is better)
Translates to: TAGRQSPCPSSR*RRTSLPAAHVD
Trigger: ATCTACATGGGCTGCGGGAAGAGACGTCCTGCGTCATCGAGAAGAAGGACAAGGAGACTGTCTTCCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCCACGCAGAGCTGGTTCTCTTGCAAGGTCTTCCCCTaGCTCTTGCAGACATCGTGGAGATTCTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: STQSWFSCKVFP*LLQTSWRFLMS
Trigger: GGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTCCTCCTGGAATTCTCGGAGCTGCGACTCCTTAGCTaGCAACATCTTAAGGTCACTCTGGTGCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: FLLEFSELRLLS*QHLKVTLVLPL
Trigger: CAGAGGCAGCACCAGAGTGACCTTAAGATGTTGGCAGCTAAGGAGTCGCAGCTCCGAGAATTCCAGGAGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TTCACAAGGTTCTGGTACTCCTCCACGTGCAGGCACTaGCTGTCTTTCTGCTCTTGCAGGTGCTTCAGGATC +
Preference number: 6 (lower is better)
Translates to: FTRFWYSSTCRH*LSFCSCRCFRI
Trigger: GATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGAGTACCAGAACCTTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp AGATCTTGCAGCCGGTACTGCAGGAAGACAGTCTCCTaGTCCTTCTTCTCGATGACGCAGGACGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RSCSRYCRKTVS*SFFSMTQDVSS
Trigger: GGAAGAGACGTCCTGCGTCATCGAGAAGAAGGACAAGGAGACTGTCTTCCTGCAGTACCGGCTGCAAGATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp ACCTGGTTGCTCATCTCCTCCAGCTTCTTGTCAAAGTaGTGCACCTCTTGCTCGCTCTGCTGTTGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: TWLLISSSFLSK*CTSCSLCCWKP
Trigger: GGGCTTCCAACAGCAGAGCGAGCAAGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp TTTTGGGAAGGCTCCAGTTTGTTTGGGGGAAAGGCCTaGACACAGATCCTCGGGTTCCCGGCCTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: FWEGSSLFGGKA*TQILGFPAFSF
Trigger: GAAGCTAAAGGCCGGGAACCCGAGGATCTGTGTCAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp GCACAGCATAGCTTTCCCTTTTGGGAAGGCTCCAGTTaGTTTGGGGGAAAGGCCTTGACACAGATCCTCGGG +
Preference number: 6 (lower is better)
Translates to: AQHSFPFWEGSS*FGGKALTQILG
Trigger: CCCGAGGATCTGTGTCAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCAAAAGGGAAAGCTATGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TCCTCCACGCAGAGCTGGTTCTCTTGCAAGGTCTTCCCCTGCCTCTaGCAGACATCGTGGAGATTCTTGATGTCCAGTTGTAGGCTCAAG +
Preference number: 6 (lower is better)
Translates to: SSTQSWFSCKVFPCL*QTSWRFLMSSCRLK
Trigger: CTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTGCGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TCCGCGTTGAGCTCTTGGATGACTTTCTGGGAGGAGTTGTATTTGTaGAGAGAGGAGTCCAGGTGTGAGGAACGGGAGGTCAACTCAGCC +
Preference number: 6 (lower is better)
Translates to: SALSSWMTFWEELYL*REESRCEEREVNSA
Trigger: GGCTGAGTTGACCTCCCGTTCCTCACACCTGGACTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp CAAGCTGCTCTTGCGCCAGATGGAGTTTCTCCCCCGTaGTCTTACTATGATTTCCCATCTCCTCCTCGTAGA +
Preference number: 6 (lower is better)
Translates to: QAALAPDGVSPP*SYYDFPSPPRR
Trigger: TCTACGAGGAGGAGATGGGAAATCATAGTAAGAGCACGGGGGAGAAACTCCATCTGGCGCAAGAGCAGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCCTCCACGTGCAGGCACTGGCTGTCTTTCTGCTCTTaGAGGTGCTTCAGGATCTTTGTGATGTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: SSTCRHWLSFCS*RCFRIFVMSSQ
Trigger: CTGTGAAGACATCACAAAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp AGCTTCTGTGACTCTGTGTACTGTTGCTGCAGATCTTaGAGCCGGTACTGCAGGAAGACAGTCTCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SFCDSVYCCCRS*SRYCRKTVSLS
Trigger: GGACAAGGAGACTGTCTTCCTGCAGTACCGGCTGCAAGATCTGCAGCAACAGTACACAGAGTCACAGAAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTCAGGGACAGCTTCTGTGACTCTGTGTACTGTTGCTaGAGATCTTGCAGCCGGTACTGCAGGAAGACAGTC +
Preference number: 6 (lower is better)
Translates to: FRDSFCDSVYCC*RSCSRYCRKTV
Trigger: GACTGTCTTCCTGCAGTACCGGCTGCAAGATCTGCAGCAACAGTACACAGAGTCACAGAAGCTGTCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp AACATCTTAAGGTCACTCTGGTGCTGCCTCTGCCACTaGAACACCTGGTTGCTCATCTCCTCCAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: NILRSLWCCLCH*NTWLLISSSFL
Trigger: CAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTGGCAGAGGCAGCACCAGAGTGACCTTAAGATGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCCACGTTGTTCATAATCTGGTCATTCTCCCGGTGGTaGCTGCAGGTTTCTTTGGGGGTTAGCTTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: STLFIIWSFSRW*LQVSLGVSFAG
Trigger: GCCTGCAAAGCTAACCCCCAAAGAAACCTGCAGGCACCACCGGGAGAATGACCAGATTATGAACAACGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp ATGAGTCCGCTGAGTTCCCCCTCCAGCATCTTCACTTaGCACTCCAGTAACTCTATGTTGCTCAGGGAAGTC +
Preference number: 6 (lower is better)
Translates to: MSPLSSPSSIFT*HSSNSMLLREV
Trigger: GACTTCCCTGAGCAACATAGAGTTACTGGAGTGCCAAGTGAAGATGCTGGAGGGGGAACTCAGCGGACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp AGTTCTCGATTTTCCGATGAGCATCCTCTAGGCTGCTaGCAGAGAGGTGCGCTTCCTCCTTACTCTGGGTTA +
Preference number: 6 (lower is better)
Translates to: SSRFSDEHPLGC*QRGALPPYSGL
Trigger: TAACCCAGAGTAAGGAGGAAGCGCACCTCTCTGCCAGCAGCCTAGAGGATGCTCATCGGAAAATCGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp AGCTCGTGCAGCCTCTCATCCTTGTCTTGGAGCAACTaGTCCTTCTTCAGGGACAGCTTCTGTGACTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSCSLSSLSWSN*SFFRDSFCDSV
Trigger: CACAGAGTCACAGAAGCTGTCCCTGAAGAAGGACAAGTTGCTCCAAGACAAGGATGAGAGGCTGCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CACTGCAACACCTGGTTGCTCATCTCCTCCAGCTTCTaGTCAAAGTTGTGCACCTCTTGCTCGCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: HCNTWLLISSSF*SKLCTSCSLCC
Trigger: ACAGCAGAGCGAGCAAGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp ACGGAACTCCAGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTaGCTGGAGTTGCCTGAGATGGTATTGCTTATTGACCCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: TELQFLLEGQQLLLQ*LELPEMVLLIDPEV
Trigger: GACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACTGGAGTTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp CACTGCAACACCTGGTTGCTCATCTCCTCCAGCTTCTTGTCAAAGTaGTGCACCTCTTGCTCGCTCTGCTGTTGGAAGCCCTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: HCNTWLLISSSFLSK*CTSCSLCCWKPCSF
Trigger: AAAACTGCAGGGCTTCCAACAGCAGAGCGAGCAAGAGGTGCACAACTTTGACAAGAAGCTGGAGGAGATGAGCAACCAGGTGTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp CAGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTGGAGTaGCCTGAGATGGTATTGCTTATTGACCCGGAAGTCCATCTGGTT +
Preference number: 6 (lower is better)
Translates to: QFLLEGQQLLLQLLE*PEMVLLIDPEVHLV
Trigger: AACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp ATCTCCGCGTTGAGCTCTTGGATGACTTTCTGGGAGGAGTTGTATTaGTTGAGAGAGGAGTCCAGGTGTGAGGAACGGGAGGTCAACTCA +
Preference number: 6 (lower is better)
Translates to: ISALSSWMTFWEELY*LREESRCEEREVNS
Trigger: TGAGTTGACCTCCCGTTCCTCACACCTGGACTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp TTGGAGCAACTTGTCCTTCTTCAGGGACAGCTTCTGTaGCTCTGTGTACTGTTGCTGCAGATCTTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LEQLVLLQGQLL*LCVLLLQILQP
Trigger: CGGCTGCAAGATCTGCAGCAACAGTACACAGAGTCACAGAAGCTGTCCCTGAAGAAGGACAAGTTGCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTGGAGTTaGCTGAGATGGTATTGCTTATTGACCCGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: WRVSSFFFSCWS*LRWYCLLTRKS
Trigger: GGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTATCAACGCCTCCTCACGCTCCAGGACCAAAGAGTTaGTGCAGGCCAGTTTATTCCGAAGCTCCTGGATTA +
Preference number: 6 (lower is better)
Translates to: LSTPPHAPGPKS*CRPVYSEAPGL
Trigger: TAATCCAGGAGCTTCGGAATAAACTGGCCTGCAGCAACTCTTTGGTCCTGGAGCGTGAGGAGGCGTTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCTGTGTACTGTTGCTGCAGATCTTGCAGCCGGTACTaGAGGAAGACAGTCTCCTTGTCCTTCTTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SVYCCCRSCSRY*RKTVSLSFFSM
Trigger: CATCGAGAAGAAGGACAAGGAGACTGTCTTCCTGCAGTACCGGCTGCAAGATCTGCAGCAACAGTACACAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TCTTGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTaGAGATTCTTGATGTCCAGTTGTAGGCTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SCKVFPCLLQTS*RFLMSSCRLKS
Trigger: GCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp AGCGACTTTTCCTTCTCTGCATTCGAAAGCCTTCTCTaGCCTTCAGAGAGTTCCGAGCTCAGCTCCTGTAAC +
Preference number: 6 (lower is better)
Translates to: SDFSFSAFESLL*PSESSELSSCN
Trigger: GTTACAGGAGCTGAGCTCGGAACTCTCTGAAGGCCAGAGAAGGCTTTCGAATGCAGAGAAGGAAAAGTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CAGAGCTGGTTCTCTTGCAAGGTCTTCCCCTGCCTCTaGCAGACATCGTGGAGATTCTTGATGTCCAGTTGT +
Preference number: 6 (lower is better)
Translates to: QSWFSCKVFPCL*QTSWRFLMSSC
Trigger: ACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGAGAACCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp TGGTTGTCCGTGAATACTAACGTCTGGGCTTGCTTCTaGTTGTGGTTGGCTTTCAGCATCGCTTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: WLSVNTNVWACF*LWLAFSIASST
Trigger: CGTGGAGGAAGCGATGCTGAAAGCCAACCACAACAAGAAGCAAGCCCAGACGTTAGTATTCACGGACAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CTGGAGGGTCAGCAGCTTCTTCTTCAGTTGCTGGAGTaGCCTGAGATGGTATTGCTTATTGACCCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: LEGQQLLLQLLE*PEMVLLIDPEV
Trigger: GACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CTTTGCCTAGCTTCTTGGAGGCTGGTGTCCAGTTCTTaGGTTGTACACTGTAGCTTCTCCAGCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: LCLASWRLVSSS*VVHCSFSSSAS
Trigger: AGAGGCAGAGCTGGAGAAGCTACAGTGTACAACCAAAGAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp GGAATCCTTCTGGCGGGCTATCTCCGCGTTGAGCTCTaGGATGACTTTCTGGGAGGAGTTGTATTTGTTGAG +
Preference number: 6 (lower is better)
Translates to: GILLAGYLRVEL*DDFLGGVVFVE
Trigger: CTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp CAGACATCGTGGAGATTCTTGATGTCCAGTTGTAGGCTCAAGAGCTaGCTGTTTAGATTGCTGACATCCCTGTCTCTCTCCCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: QTSWRFLMSSCRLKS*LFRLLTSLSLSPAS
Trigger: TGAGGCTGGGGAGAGAGACAGGGATGTCAGCAATCTAAACAGCAAGCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TTGGATGTGCTTTGCCTAGCTTCTTGGAGGCTGGTGTCCAGTTCTTaGGTTGTACACTGTAGCTTCTCCAGCTCTGCCTCTTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LDVLCLASWRLVSSS*VVHCSFSSSASFSL
Trigger: CAGAGAGAAAGAGGCAGAGCTGGAGAAGCTACAGTGTACAACCAAAGAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAGCACATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp AGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTTaGTGGAGTTGCCTGAGATGGTATTGCTTATTGACC +
Preference number: 6 (lower is better)
Translates to: SSCWRVSSFFFS*WSCLRWYCLLT
Trigger: GGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp CCAGCATCTTCACTTGGCACTCCAGTAACTCTATGTTaGTCAGGGAAGTCTGGTACTTGTCCCTGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: PASSLGTPVTLC*SGKSGTCPCRG
Trigger: ACCTCTACAGGGACAAGTACCAGACTTCCCTGAGCAACATAGAGTTACTGGAGTGCCAAGTGAAGATGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp ACGTGCAGGCACTGGCTGTCTTTCTGCTCTTGCAGGTaGTTCAGGATCTTTGTGATGTCTTCACAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: TCRHWLSFCSCR*FRIFVMSSQSS
Trigger: AGAAGACTGTGAAGACATCACAAAGATCCTGAAGCACCTGCAAGAGCAGAAAGACAGCCAGTGCCTGCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCTTTTTCTTCTGTTCTGACACAGCTTCCAGCTCCATaGGCAGGTCCTTCACAAGGTTCTGGTACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SFSSVLTQLPAP*AGPSQGSGTPP
Trigger: TGGAGGAGTACCAGAACCTTGTGAAGGACCTGCGCATGGAGCTGGAAGCTGTGTCAGAACAGAAGAAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp CGGAAGTCCATCTGGTTGTCCGTGAATACTAACGTCTaGGCTTGCTTCTTGTTGTGGTTGGCTTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: RKSIWLSVNTNV*ACFLLWLAFSI
Trigger: GATGCTGAAAGCCAACCACAACAAGAAGCAAGCCCAGACGTTAGTATTCACGGACAACCAGATGGACTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TGTTCCACGTTGTTCATAATCTGGTCATTCTCCCGGTaGTGCCTGCAGGTTTCTTTGGGGGTTAGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: CSTLFIIWSFSR*CLQVSLGVSFA
Trigger: TGCAAAGCTAACCCCCAAAGAAACCTGCAGGCACCACCGGGAGAATGACCAGATTATGAACAACGTGGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TGCTCCTTTGCCCATTGTTCCACGTTGTTCATAATCTaGTCATTCTCCCGGTGGTGCCTGCAGGTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: CSFAHCSTLFII*SFSRWCLQVSL
Trigger: CAAAGAAACCTGCAGGCACCACCGGGAGAATGACCAGATTATGAACAACGTGGAACAATGGGCAAAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp GTCTTCCCCTGCCTCTTGCAGACATCGTGGAGATTCTaGATGTCCAGTTGTAGGCTCAAGAGCTTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: VFPCLLQTSWRF*MSSCRLKSLLF
Trigger: AAACAGCAAGCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CAGTTCCTGCTGGAGGGTCAGCAGCTTCTTCTTCAGTaGCTGGAGTTGCCTGAGATGGTATTGCTTATTGAC +
Preference number: 6 (lower is better)
Translates to: QFLLEGQQLLLQ*LELPEMVLLID
Trigger: GTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCTGCTGACCCTCCAGCAGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp ATCATGATGGAATCCTTCTGGCGGGCTATCTCCGCGTaGAGCTCTTGGATGACTTTCTGGGAGGAGTTGTAT +
Preference number: 6 (lower is better)
Translates to: IMMESFWRAISA*SSWMTFWEELY
Trigger: ATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGATTCCATCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp AGCTTTTTGTTCTCCTGCTGCAGGTGGACCATTACATaGTGGAGGTGGTCCTTTTCGCCAGTCAACTTGGCA +
Preference number: 6 (lower is better)
Translates to: SFLFSCCRWTIT*WRWSFSPVNLA
Trigger: TGCCAAGTTGACTGGCGAAAAGGACCACCTCCACAATGTAATGGTCCACCTGCAGCAGGAGAACAAAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TCTTGCAAGGTCTTCCCCTGCCTCTTGCAGACATCGTGGAGATTCTaGATGTCCAGTTGTAGGCTCAAGAGCTTGCTGTTTAGATTGCTG +
Preference number: 6 (lower is better)
Translates to: SCKVFPCLLQTSWRF*MSSCRLKSLLFRLL
Trigger: CAGCAATCTAAACAGCAAGCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGACCTTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp AATCATGATGGAATCCTTCTGGCGGGCTATCTCCGCGTTGAGCTCTaGGATGACTTTCTGGGAGGAGTTGTATTTGTTGAGAGAGGAGTC +
Preference number: 6 (lower is better)
Translates to: NHDGILLAGYLRVEL*DDFLGGVVFVERGV
Trigger: GACTCCTCTCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGATTCCATCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp GTCTGCAGAATCATGATGGAATCCTTCTGGCGGGCTATCTCCGCGTaGAGCTCTTGGATGACTTTCTGGGAGGAGTTGTATTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: VCRIMMESFWRAISA*SSWMTFWEELYLLR
Trigger: TCTCAACAAATACAACTCCTCCCAGAAAGTCATCCAAGAGCTCAACGCGGAGATAGCCCGCCAGAAGGATTCCATCATGATTCTGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp GAGCTTTTTCATCCTTTCCTCATAAGCCGCGATTTCATCTTCCAGTaGAGCTTTCCTCTCCTGGGTCTGTTGCAAGGAGCGATTCAGGCT +
Preference number: 6 (lower is better)
Translates to: ELFHPFLISRDFIFQ*SFPLLGLLQGAIQA
Trigger: AGCCTGAATCGCTCCTTGCAACAGACCCAGGAGAGGAAAGCTCAACTGGAAGATGAAATCGCGGCTTATGAGGAAAGGATGAAAAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS TCA 72 bp TCTTCCCCTGCCTCTTGCAGACATCGTGGAGATTCTTaGTGTCCAGTTGTAGGCTCAAGAGCTTGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: SSPASCRHRGDS*CPVVGSRACCL
Trigger: TAAACAGCAAGCTCTTGAGCCTACAACTGGACATCAAGAATCTCCACGATGTCTGCAAGAGGCAGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTCTTCTTCAGTTGCTGGAGTTGCCTGAGATGGTATTaGTTATTGACCCGGAAGTCCATCTGGTTGTCCGTG +
Preference number: 6 (lower is better)
Translates to: FFFSCWSCLRWY*LLTRKSIWLSV
Trigger: CACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp AACTGGCTCTGCAGATCCTTAATGACCTCTTCCTTCTaGTTGTCCTGGAGAAGGCAGTTCTCGATTTTCCGA +
Preference number: 6 (lower is better)
Translates to: NWLCRSLMTSSF*LSWRRQFSIFR
Trigger: TCGGAAAATCGAGAACTGCCTTCTCCAGGACAAGCAGAAGGAAGAGGTCATTAAGGATCTGCAGAGCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp CCTTCAGAGAGTTCCGAGCTCAGCTCCTGTAACCGTTaGCTGTTGTGTTTTCGTTCCTCCTCAATTTTCGAA +
Preference number: 6 (lower is better)
Translates to: PSESSELSSCNR*LLCFRSSSIFE
Trigger: TTCGAAAATTGAGGAGGAACGAAAACACAACAGGCAACGGTTACAGGAGCTGAGCTCGGAACTCTCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp ATCCAGTGTCTTCTGAAGCAGCGACTTTTCCTTCTCTaGATTCGAAAGCCTTCTCTGGCCTTCAGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: IQCLLKQRLFLL*IRKPSLAFREF
Trigger: GAACTCTCTGAAGGCCAGAGAAGGCTTTCGAATGCAGAGAAGGAAAAGTCGCTGCTTCAGAAGACACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CTTCTTCTTCAGTTGCTGGAGTTGCCTGAGATGGTATaGCTTATTGACCCGGAAGTCCATCTGGTTGTCCGT +
Preference number: 6 (lower is better)
Translates to: LLLQLLELPEMV*LIDPEVHLVVR
Trigger: ACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp AGTTGCCTGAGATGGTATTGCTTATTGACCCGGAAGTCCATCTGGTaGTCCGTGAATACTAACGTCTGGGCTTGCTTCTTGTTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SCLRWYCLLTRKSIW*SVNTNVWACFLLWL
Trigger: CAACCACAACAAGAAGCAAGCCCAGACGTTAGTATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp AGCTTCTTCTTCAGTTGCTGGAGTTGCCTGAGATGGTATTGCTTATaGACCCGGAAGTCCATCTGGTTGTCCGTGAATACTAACGTCTGG +
Preference number: 6 (lower is better)
Translates to: SFFFSCWSCLRWYCL*TRKSIWLSVNTNVW
Trigger: CCAGACGTTAGTATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAAGAAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp CTTTCTCAAATGTTCCTTCGCCATCTTCTCTTTCCTTTTCGCTTCTaGTCGCAAAGCCTCGATCTCTTCCTCCAGTGCCTTCTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LSQMFLRHLLFPFRF*SQSLDLFLQCLLLF
Trigger: GAACAGGAGAAGGCACTGGAGGAAGAGATCGAGGCTTTGCGACAAGAAGCGAAAAGGAAAGAGAAGATGGCGAAGGAACATTTGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp GCCCTTTTATCTCCAGAAGTTCCTCCTCTAGCTTCCTTATGGAGTTaGTTAGCTCCCTTTGCTTTTGCTCAGAGACTTGGGTGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: ALLSPEVPPLASLWS*LAPFAFAQRLGCCE
Trigger: TTCACAGCACCCAAGTCTCTGAGCAAAAGCAAAGGGAGCTAACAAACTCCATAAGGAAGCTAGAGGAGGAACTTCTGGAGATAAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp AGGTGGACCATTACATTGTGGAGGTGGTCCTTTTCGCCAGTCAACTaGGCAATGTATTTAACCTGCTCTCTCAGCTTGTTTCCCAACTTC +
Preference number: 6 (lower is better)
Translates to: RWTITLWRWSFSPVN*AMYLTCSLSLFPNF
Trigger: GAAGTTGGGAAACAAGCTGAGAGAGCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAAGGACCACCTCCACAATGTAATGGTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TTCTCTTCTATCTCGTTCTTCAGCTTTTTGTTCTCCTaGTGCAGGTGGACCATTACATTGTGGAGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: FSSISFFSFLFS*CRWTITLWRWS
Trigger: GGACCACCTCCACAATGTAATGGTCCACCTGCAGCAGGAGAACAAAAAGCTGAAGAACGAGATAGAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TCGCAGTCTATTTTGGATGTGCTTTGCCTAGCTTCTTaGAGGCTGGTGTCCAGTTCTTTGGTTGTACACTGT +
Preference number: 6 (lower is better)
Translates to: SQSILDVLCLAS*RLVSSSLVVHC
Trigger: ACAGTGTACAACCAAAGAACTGGACACCAGCCTCCAAGAAGCTAGGCAAAGCACATCCAAAATAGACTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp TTCAGTTGCTGGAGTTGCCTGAGATGGTATTGCTTATaGACCCGGAAGTCCATCTGGTTGTCCGTGAATACT +
Preference number: 6 (lower is better)
Translates to: FSCWSCLRWYCL*TRKSIWLSVNT
Trigger: AGTATTCACGGACAACCAGATGGACTTCCGGGTCAATAAGCAATACCATCTCAGGCAACTCCAGCAACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCCTCCTCAATTTTCGAAGACTCCTTCTGTAGCTTATaGAACTGGCTCTGCAGATCCTTAATGACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSSIFEDSFCSL*NWLCRSLMTSS
Trigger: GGAAGAGGTCATTAAGGATCTGCAGAGCCAGTTGCATAAGCTACAGAAGGAGTCTTCGAAAATTGAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp CAACTTCTCATTGGCAATCTTCTGCTCCTTTGCCCATaGTTCCACGTTGTTCATAATCTGGTCATTCTCCCG +
Preference number: 6 (lower is better)
Translates to: QLLIGNLLLLCP*FHVVHNLVILP
Trigger: CGGGAGAATGACCAGATTATGAACAACGTGGAACAATGGGCAAAGGAGCAGAAGATTGCCAATGAGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 90 bp TTTTCGCCAGTCAACTTGGCAATGTATTTAACCTGCTCTCTCAGCTaGTTTCCCAACTTCTCATTGGCAATCTTCTGCTCCTTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: FSPVNLAMYLTCSLS*FPNFSLAIFCSFAH
Trigger: ATGGGCAAAGGAGCAGAAGATTGCCAATGAGAAGTTGGGAAACAAGCTGAGAGAGCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp TCCTTTTCGCCAGTCAACTTGGCAATGTATTTAACCTaGTCTCTCAGCTTGTTTCCCAACTTCTCATTGGCA +
Preference number: 6 (lower is better)
Translates to: SFSPVNLAMYLT*SLSLFPNFSLA
Trigger: TGCCAATGAGAAGTTGGGAAACAAGCTGAGAGAGCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TCAATTTTCGAAGACTCCTTCTGTAGCTTATGCAACTaGCTCTGCAGATCCTTAATGACCTCTTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SIFEDSFCSLCN*LCRSLMTSSFC
Trigger: GCAGAAGGAAGAGGTCATTAAGGATCTGCAGAGCCAGTTGCATAAGCTACAGAAGGAGTCTTCGAAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS GCA 72 bp GTTTCCCAACTTCTCATTGGCAATCTTCTGCTCCTTTaGCCATTGTTCCACGTTGTTCATAATCTGGTCATT +
Preference number: 6 (lower is better)
Translates to: VSQLLIGNLLLL*PLFHVVHNLVI
Trigger: AATGACCAGATTATGAACAACGTGGAACAATGGGCAAAGGAGCAGAAGATTGCCAATGAGAAGTTGGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp CTTTTATCTCCAGAAGTTCCTCCTCTAGCTTCCTTATaGAGTTTGTTAGCTCCCTTTGCTTTTGCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: LLSPEVPPLASL*SLLAPFAFAQR
Trigger: TCTCTGAGCAAAAGCAAAGGGAGCTAACAAACTCCATAAGGAAGCTAGAGGAGGAACTTCTGGAGATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CCA 72 bp TTACTAACCATGTTCTGGAAACAGTTCTTCTCTTTCTaGATAGCCGAATCCAGCTGTGTCTGCAGAATCATG +
Preference number: 6 (lower is better)
Translates to: LLTMFWKQFFSF*IAESSCVCRIM
Trigger: CATGATTCTGCAGACACAGCTGGATTCGGCTATCCAGAAAGAGAAGAACTGTTTCCAGAACATGGTTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8
CDS CAA 72 bp ATTACATTGTGGAGGTGGTCCTTTTCGCCAGTCAACTaGGCAATGTATTTAACCTGCTCTCTCAGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: ITLWRWSFSPVN*AMYLTCSLSLF
Trigger: AAACAAGCTGAGAGAGCAGGTTAAATACATTGCCAAGTTGACTGGCGAAAAGGACCACCTCCACAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034162.8