Pregenerated sensors for PMEPA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038400Ensembl transcript IDs: ENSMUST00000036248.13, ENSMUST00000139306.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTTACGCTGGAGGCGGAGGGATGGAGGGACGGGCCGCTGGTGCTaGCAGTCTTTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTG | + |
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Preference number: 1 (lower is better) Translates to: KLRWRRRDGGTGRWC*QSFLTPLGFLGEHL Trigger: CAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGTCCCTCCATCCCTCCGCCTCCAGCGTAACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GAAGGAAAGTTACGCTGGAGGCGGAGGGATGGAGGGACGGGCCGCTaGTGCTGGCAGTCTTTCCTAACCCCTTTGGGCTTCCTGGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EGKLRWRRRDGGTGR*CWQSFLTPLGFLGE Trigger: TTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGTCCCTCCATCCCTCCGCCTCCAGCGTAACTTTCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GCTCCAGGCACGGAGAAATCCCAAGTGCTGACCAGGAACAGAAGGTaGGGGGACAGCTGCAAAGAAGGGCACCCCAAAGCCGAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: APGTEKSQVLTRNRR*GDSCKEGHPKAEQQ Trigger: CTGCTGCTCGGCTTTGGGGTGCCCTTCTTTGCAGCTGTCCCCCCACCTTCTGTTCCTGGTCAGCACTTGGGATTTCTCCGTGCCTGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | CAAAGCCGAGCAGCAGTGCAGCCGGACAGGGTGCTGAGGGAGGGGTaGCAGATGACAAAGGAGGTGTGGCATTTCGGGCTCTCAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: QSRAAVQPDRVLREG*QMTKEVWHFGLSSP Trigger: TGGACTTGAGAGCCCGAAATGCCACACCTCCTTTGTCATCTGTCACCCCTCCCTCAGCACCCTGTCCGGCTGCACTGCTGCTCGGCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR GCA 90 bp | CCACATGCAGTATTCCATGAGGCTGCAGGGACAGCTGGGGGCCTCTaGAAGCAGGGTACATGCATGCTGAGGGAAGGGAAGGGAAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: PHAVFHEAAGTAGGL*KQGTCMLREGKGRG Trigger: TCCCCTTCCCTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCTGTCCCTGCAGCCTCATGGAATACTGCATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | GTTTGGCCAGAGCTCAGGGTCCCACTACCAGCAGCCTGCAGGGACTaGCAGCCTGACACTCAGGACACCCTGCCTTTGACAAGTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: VWPELRVPLPAACRD*QPDTQDTLPLTSPF Trigger: GAAAGGACTTGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCCTGCAGGCTGCTGGTAGTGGGACCCTGAGCTCTGGCCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR GCA 90 bp | CTGGAGCTCGGCAGAGCCTTCCTGCCTTTACACAGCCTGGAGCTCTaGAGGGGCTGTGACCTCTCTGGAGCAAGCAGTGGAGATGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: LELGRAFLPLHSLEL*RGCDLSGASSGDGN Trigger: ATTACCATCTCCACTGCTTGCTCCAGAGAGGTCACAGCCCCTGCAGAGCTCCAGGCTGTGTAAAGGCAGGAAGGCTCTGCCGAGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | ACGGGTCCCCTTCGGCAGGGAATGTGTAACTGTTCACAGCCTGTCTaGACAGAAGCATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TGPLRQGMCNCSQPV*TEASIGLQAACCVA Trigger: GGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCTGTGAACAGTTACACATTCCCTGCCGAAGGGGACCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | AGAGCTCAGGGTCCCACTACCAGCAGCCTGCAGGGACTGACAGCCTaGCACTCAGGACACCCTGCCTTTGACAAGTCCTTTCCTTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: RAQGPTTSSLQGLTA*HSGHPAFDKSFPSS Trigger: GCTTGAAGGAAAGGACTTGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCCTGCAGGCTGCTGGTAGTGGGACCCTGAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | CAGCCTGCAGGGACTGACAGCCTGACACTCAGGACACCCTGCCTTTaGCAAGTCCTTTCCTTCAAGCTCCTACAACCCACATCCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QPAGTDSLTLRTPCL*QVLSFKLLQPTSKG Trigger: TCCCTTGGATGTGGGTTGTAGGAGCTTGAAGGAAAGGACTTGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCCTGCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GCAGGGGCTGTGACCTCTCTGGAGCAAGCAGTGGAGATGGTAATGTaGGCAGAGGGAGTCAAGAACTCTCCCTTTCTCAGAACCGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AGAVTSLEQAVEMVM*AEGVKNSPFLRTER Trigger: CCTTTCGGTTCTGAGAAAGGGAGAGTTCTTGACTCCCTCTGCCCACATTACCATCTCCACTGCTTGCTCCAGAGAGGTCACAGCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | TTTCGCGCAGTAGGCAAAGTCATGCAGATCCCAGCTTTACAAAGCTaGCTCACAGCCTGGAGCTCGGCAGAGCCTTCCTGCCTTTACACA | + |
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Preference number: 1 (lower is better) Translates to: FRAVGKVMQIPALQS*LTAWSSAEPSCLYT Trigger: TGTGTAAAGGCAGGAAGGCTCTGCCGAGCTCCAGGCTGTGAGCCAGCTTTGTAAAGCTGGGATCTGCATGACTTTGCCTACTGCGCGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GCCACTTCCCAGGATCTGCTTAATTTGCCATGGGAAGAGATAGTGTaGACCCAGCATGTAGAGTTTGGCCAGAGCTCAGGGTCCCACTAC | + |
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Preference number: 1 (lower is better) Translates to: ATSQDLLNLPWEEIV*TQHVEFGQSSGSHY Trigger: GTAGTGGGACCCTGAGCTCTGGCCAAACTCTACATGCTGGGTCCACACTATCTCTTCCCATGGCAAATTAAGCAGATCCTGGGAAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | CAAGGACAGCCATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTaGCTTGGCTTTCAGCTGAAGCCGCAGACACAAATAAGGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QGQPFWPQRTVGTFI*LGFQLKPQTQIRFP Trigger: AGGAAACCTTATTTGTGTCTGCGGCTTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAATGGCTGTCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GTTCCTTTCCAACCAGCCACTTCCCAGGATCTGCTTAATTTGCCATaGGAAGAGATAGTGTGGACCCAGCATGTAGAGTTTGGCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: VPFQPATSQDLLNLP*EEIVWTQHVEFGQS Trigger: GCTCTGGCCAAACTCTACATGCTGGGTCCACACTATCTCTTCCCATGGCAAATTAAGCAGATCCTGGGAAGTGGCTGGTTGGAAAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | GAGAACACATCTCGCATCATTACAATATTCTGTGGTTCTGGAAGTTaGGGGACATGGAACTTGGCCACGCGGGTCACAACAGTGACCAAG | + |
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Preference number: 1 (lower is better) Translates to: ENTSRIITIFCGSGS*GTWNLATRVTTVTK Trigger: CTTGGTCACTGTTGTGACCCGCGTGGCCAAGTTCCATGTCCCTCAACTTCCAGAACCACAGAATATTGTAATGATGCGAGATGTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 90 bp | ACAAAGGAGGTGTGGCATTTCGGGCTCTCAAGTCCAGAGCACAGATaGGAACACATCTCGCATCATTACAATATTCTGTGGTTCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TKEVWHFGLSSPEHR*EHISHHYNILWFWK Trigger: CTTCCAGAACCACAGAATATTGTAATGATGCGAGATGTGTTCTCATCTGTGCTCTGGACTTGAGAGCCCGAAATGCCACACCTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 90 bp | GGAACACTTGGGCTTGTCCCTTTCAATCTTGGGCTGACTCTTAATTaGCTTCTTGAAGTGAAAATCAATATTGAGGGAAACACATGGTCA | + |
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Preference number: 1 (lower is better) Translates to: GTLGLVPFNLGLTLN*LLEVKINIEGNTWS Trigger: TGACCATGTGTTTCCCTCAATATTGATTTTCACTTCAAGAAGCCAATTAAGAGTCAGCCCAAGATTGAAAGGGACAAGCCCAAGTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGGGCCTCTGCAAGCAGGGTACATGCATGCTGAGGGAAGGGAAGGGAAGGGAGTGTCCCCACCCTaGGCCCGGAGGGAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SWGPLQAGYMHAEGREGKGVSPP*ARRESS Trigger: AGAGCTCTCCCTCCGGGCTCAGGGTGGGGACACTCC...CTTCCCTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCAACAACCCATCCAACAAAGCAAGGACAGCCATTTTGGCCCCAGAGGACGGCCCTGGGGGAGCCTaGCTTTCCTGCACAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PCNNPSNKARTAILAPEDGPGGA*LSCTVG Trigger: CCCCACTGTGCAGGAAAGCCAGGCTCCCCCAGGGCC...GTCCTCTGGGGCCAAAATGGCTGTCCTTGCTTTGTTGGATGGGTTGTTGCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAACAGTGGGGGCCCTCTaGGACCCAGGGGGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ILAPEDSGHVHLAWLSAETVGAL*DPGGGG Trigger: CCCTCCACCCCCTGGGTCTCAGAGGGCCCCCACTGT...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAGGACCGCCCTGTGGATaGGGAGGGGTGGCGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ILAPEDSGHVHLAWLSAEGPPCG*GGVAGS Trigger: TGACCCCGCCACCCCTCCCCATCCACAGGGCGGTCC...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAGAGGTCAAGCAGCCATCACCCTGGGCCGTTCCTACATGCCAGGGTGGAAGCCTGTGTGTCCCCTaGCTTCCTCTCTCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: WSEVKQPSPWAVPTCQGGSLCVP*LPLSSL Trigger: GAGAGAAGAGAGAGGAAGTCAGGGGACACACAGGCT...TCCACCCTGGCATGTAGGAACGGCCCAGGGTGATGGCTGCTTGACCTCTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACGTGCTGAGGGAGGGGTaGCAGATGACAAAGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VQSPTVGCSRHGEIPSADVLREG*QMTKEV Trigger: CACCTCCTTTGTCATCTGTCACCCCTCCCTCAGCAC...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACACATGCAGTATTCCATaGGGCTGCAGGGACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VQSPTVGCSRHGEIPSADTCSIP*GCRDSW Trigger: CCAGCTGTCCCTGCAGCCTCATGGAATACTGCATGT...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACGCTGCTGTATCCACCTaGCACCAAATTCGGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: VQSPTVGCSRHGEIPSADAAVST*HQIRGL Trigger: CAGTCCCCGAATTTGGTGCCAGGTGGATACAGCAGC...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACTGTGGTTCTGGAAGTTaGGGGACATGGAACTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VQSPTVGCSRHGEIPSADCGSGS*GTWNLA Trigger: GGCCAAGTTCCATGTCCCTCAACTTCCAGAACCACA...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAGGCTTTCCTGCACAGTaGGGGCCCTCTGAGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: ILAPEDSGHVHLAWLSAEGFPAQ*GPSETQ Trigger: CTGGGTCTCAGAGGGCCCCCACTGTGCAGGAAAGCC...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACTGTTCACAGCCTGTCTaGACAGAAGCATCCATTGGC | + |
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Preference number: 2 (lower is better) Translates to: VQSPTVGCSRHGEIPSADCSQPV*TEASIG Trigger: GCCAATGGATGCTTCTGTCCAGACAGGCTGTGAACA...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAACGGGCCGCTGGTGCTaGCAGTCTTTCCTAACCCCT | + |
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Preference number: 2 (lower is better) Translates to: ILAPEDSGHVHLAWLSAETGRWC*QSFLTP Trigger: AGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGT...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTTTCAAAGCATCCATTGGCTTaGAGGCGGCATGCTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SFLTPLGFLGEHLGLSLSKHPLA*RRHAVW Trigger: CCACACAGCATGCCGCCTGCAAGCCAATGGATGCTT...TGAAAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAACCAGCCTTGGGACACTaGAGTCTAACCCGCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ILAPEDSGHVHLAWLSAEPALGH*SLTRFC Trigger: GCAGAAGCGGGTTAGACTCCAGTGTCCCAAGGCTGG...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CAA 90 bp | GCAAGGACAGCCATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTaGGCTTGGCTTTCAGCTGAAGCCGCAGACACAAATAAGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ARTAILAPEDSGHVH*AWLSAEAADTNKVS Trigger: GGAAACCTTATTTGTGTCTGCGGCTTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAATGGCTGTCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGGGCCTCTGCAAGCAGGGTACATGCATGCTGAGGGAAGGGAAGGGAAGGAGCATTTTCTCTTTTaGCTTCAAGACACGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SWGPLQAGYMHAEGREGKEHFLF*LQDTAQ Trigger: TTGAGCCGTGTCTTGAAGGCAAAAGAGAAAATGCTC...CTTCCCTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CAA 90 bp | AGGTCGGTTCCTTTCCAACCAGCCACTTCCCAGGATCTGCTTAATTaGCCATGGGAAGAGATAGTGTGGACCCAGCATGTAGAGTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RSVPFQPATSQDLLN*PWEEIVWTQHVEFG Trigger: GCCAAACTCTACATGCTGGGTCCACACTATCTCTTCCCATGGCAAATTAAGCAGATCCTGGGAAGTGGCTGGTTGGAAAGGAACCGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGACTCTTAATTGGCTTCTTGAAGTGAAAATCAATATTGAGGGAAACACAAGGCGGCATGCTGTGTaGCCCTGGGGGAGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GLTLNWLLEVKINIEGNTRRHAV*PWGSLA Trigger: AGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCT...TGTGTTTCCCTCAATATTGATTTTCACTTCAAGAAGCCAATTAAGAGTCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTTTCAATCGGGCTGACTCTTAATTaGCTTCTTGAAGTGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: FLTPLGFLGEHLGLSLSIGLTLN*LLEVKI Trigger: GATTTTCACTTCAAGAAGCCAATTAAGAGTCAGCCC...GATTGAAAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCATCCTACATACTAATTACATGCTGGGAAATGAGACCCCAGTCCCGCTACTTTCAATCTTGGGCTaGCTCTTAATTGGCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PSILHTNYMLGNETPVPLLSILG*LLIGFL Trigger: CAAGAAGCCAATTAAGAGTCAGCCCAAGATTGAAAG...TAGCGGGACTGGGGTCTCATTTCCCAGCATGTAATTAGTATGTAGGATGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTTCCTCGGTAAGGCATCGGATATTATTCGCACAGGGAAACACGGGACATACATACTAATTACATaGTGGGAAATGAGACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ELFLGKASDIIRTGKHGTYILIT*WEMRPQ Trigger: CTGGGGTCTCATTTCCCAGCATGTAATTAGTATGTA...TGTCCCGTGTTTCCCTGTGCGAATAATATCCGATGCCTTACCGAGGAAGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAACTAAGAACAATGAAGGAAAGACTAGTAGAGCATTTTCTCTTTTGCCTAGCTTTTTGAGCTTCTaGATTCAGACCACACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SSTKNNEGKTSRAFSLLPSFLSF*IQTTQN Trigger: GTTCTGTGTGGTCTGAATGCAGAAGCTCAAAAAGCT...AGGCAAAAGAGAAAATGCTCTACTAGTCTTTCCTTCATTGTTCTTAGTTGAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR GCA 72 bp | CGCTGGAGGCGGAGGGATGGAGGGACGGGCCGCTGGTaGTGGCAGTCTTTCCTAACCCCTTTGGGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RWRRRDGGTGRW*WQSFLTPLGFL Trigger: CAGGAAGCCCAAAGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGTCCCTCCATCCCTCCGCCTCCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 72 bp | CATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCCCTaGGGGAGCCTGGCTTTCCTGCACAGTGGGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: HPLACRRHAVWP*GSLAFLHSGGP Trigger: AGGGCCCCCACTGTGCAGGAAAGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 72 bp | TGGAGGCGGAGGGATGGAGGGACGGGCCGCTGGTGCTaGCAGTCTTTCCTAACCCCTTTGGGCTTCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: WRRRDGGTGRWC*QSFLTPLGFLG Trigger: CCCCAGGAAGCCCAAAGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGTCCCTCCATCCCTCCGCCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 72 bp | GGAGGGGAGAGTCCAGGAGGAGAAGGAAAGTTACGCTaGAGGCGGAGGGATGGAGGGACGGGCCGCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: GGESPGGEGKLR*RRRDGGTGRWC Trigger: GCACCAGCGGCCCGTCCCTCCATCCCTCCGCCTCCAGCGTAACTTTCCTTCTCCTCCTGGACTCTCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 72 bp | CAGAAGCATCCATTGGCTTGCAGGCGGCATGCTGTGTaGCCCTGGGGGAGCCTGGCTTTCCTGCACAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QKHPLACRRHAV*PWGSLAFLHSG Trigger: CCCACTGTGCAGGAAAGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR TCA 72 bp | GCAGCAGTGCAGCCGGACAGGGTGCTGAGGGAGGGGTaGCAGATGACAAAGGAGGTGTGGCATTTCGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: AAVQPDRVLREG*QMTKEVWHFGL Trigger: GAGCCCGAAATGCCACACCTCCTTTGTCATCTGTCACCCCTCCCTCAGCACCCTGTCCGGCTGCACTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR GCA 72 bp | GTTCACAGCCTGTCTGGACAGAAGCATCCATTGGCTTaGAGGCGGCATGCTGTGTGGCCCTGGGGGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: VHSLSGQKHPLA*RRHAVWPWGSL Trigger: CAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCTGTGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| 3UTR CCA 72 bp | GCAGCCATCACCCTGGGCCGTTCCTACATGCCAGGGTaGAACTGCGTAGATCCCAGCCTTGGGACACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AAITLGRSYMPG*NCVDPSLGTLE Trigger: CTCCAGTGTCCCAAGGCTGGGATCTACGCAGTTCCACCCTGGCATGTAGGAACGGCCCAGGGTGATGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR TCA 72 bp | GAGCTCAGGGTCCCACTACCAGCAGCCTGCAGGGACTaGCAGCCTGACACTCAGGACACCCTGCCTTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ELRVPLPAACRD*QPDTQDTLPLT Trigger: TGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCCTGCAGGCTGCTGGTAGTGGGACCCTGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | GGCAGAGCCTTCCTGCCTTTACACAGCCTGGAGCTCTaGAGGGGCTGTGACCTCTCTGGAGCAAGCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRAFLPLHSLEL*RGCDLSGASSG Trigger: TCCACTGCTTGCTCCAGAGAGGTCACAGCCCCTGCAGAGCTCCAGGCTGTGTAAAGGCAGGAAGGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | GTATTCCATGAGGCTGCAGGGACAGCTGGGGGCCTCTaGAAGCAGGGTACATGCATGCTGAGGGAAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFHEAAGTAGGL*KQGTCMLREGK Trigger: CTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCTGTCCCTGCAGCCTCATGGAATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | CTTCTTCAGGCCTGGGTACAGTCTCCCACAGTCGGGTaGTCCAGGCACGGAGAAATCCCAAGTGCTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLQAWVQSPTVG*SRHGEIPSADQ Trigger: CTGGTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTACCCAGGCCTGAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | TGGAGAAGTAGGTCTCCTGGGAATGTTCTGCCCGGATaGATCTGCAGGCCTCCAGGCTCAGGATCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WRSRSPGNVLPG*ICRPPGSGSSR Trigger: CCTGCTGGATCCTGAGCCTGGAGGCCTGCAGATCCATCCGGGCAGAACATTCCCAGGAGACCTACTTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | ATCACCCTGGGCCGTTCCTACATGCCAGGGTGGAACTaGGTAGATCCCAGCCTTGGGACACTGGAGTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ITLGRSYMPGWN*VDPSLGTLESN Trigger: GTTAGACTCCAGTGTCCCAAGGCTGGGATCTACGCAGTTCCACCCTGGCATGTAGGAACGGCCCAGGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | ATCCCAGCCTTGGGACACTGGAGTCTAACCCGCTTCTaGATGAAGCCAGCTGCTGTATCCACCTGGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: IPALGHWSLTRF*MKPAAVSTWHQ Trigger: TTGGTGCCAGGTGGATACAGCAGCTGGCTTCATGCAGAAGCGGGTTAGACTCCAGTGTCCCAAGGCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | ACCCGCTTCTGCATGAAGCCAGCTGCTGTATCCACCTaGCACCAAATTCGGGGACTGCTTTGGCTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TRFCMKPAAVST*HQIRGLLWLWG Trigger: TCCCCAAAGCCAAAGCAGTCCCCGAATTTGGTGCCAGGTGGATACAGCAGCTGGCTTCATGCAGAAGCGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | ATGGGAAGAGATAGTGTGGACCCAGCATGTAGAGTTTaGCCAGAGCTCAGGGTCCCACTACCAGCAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MGRDSVDPACRV*PELRVPLPAAC Trigger: GCAGGCTGCTGGTAGTGGGACCCTGAGCTCTGGCCAAACTCTACATGCTGGGTCCACACTATCTCTTCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | ATGCAGATCCCAGCTTTACAAAGCTGGCTCACAGCCTaGAGCTCGGCAGAGCCTTCCTGCCTTTACACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: MQIPALQSWLTA*SSAEPSCLYTA Trigger: GGCTGTGTAAAGGCAGGAAGGCTCTGCCGAGCTCCAGGCTGTGAGCCAGCTTTGTAAAGCTGGGATCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCAACAACCCATCCAACAAAGCAAGGACAGCCATTTTGGCCCCAGAGGACTCTTTCCTAACCCCTTaGGGCTTCCTGGGGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PCNNPSNKARTAILAPEDSFLTP*GFLGEH Trigger: GTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGA...GTCCTCTGGGGCCAAAATGGCTGTCCTTGCTTTGTTGGATGGGTTGTTGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CTTCGGCAGGGAATGTGTAACTGTTCACAGCCTGTCTaGACAGAAGCATCCATTGGCTTGCAGGCGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LRQGMCNCSQPV*TEASIGLQAAC Trigger: GCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCTGTGAACAGTTACACATTCCCTGCCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR TCA 72 bp | AGAACTACCACACGGCCACTCAGCCTGTGTGTCCCCTaGCTTCCTCTCTCTTCTCTCTTAAGAAGTGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RTTTRPLSLCVP*LPLSSLLRSAE Trigger: CTCCGCACTTCTTAAGAGAGAAGAGAGAGGAAGTCAGGGGACACACAGGCTGAGTGGCCGTGTGGTAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR TCA 72 bp | GGGACTGACAGCCTGACACTCAGGACACCCTGCCTTTaGCAAGTCCTTTCCTTCAAGCTCCTACAACCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GTDSLTLRTPCL*QVLSFKLLQPT Trigger: TGTGGGTTGTAGGAGCTTGAAGGAAAGGACTTGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | GAACAGAGAGCGGTTGAACAGAGAGGGTCTGGAGTCTaGCTGACCCTGATTCCTGTTACACGTAGGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: EQRAVEQRGSGV*LTLIPVTRRVQ Trigger: CTGTACCCTACGTGTAACAGGAATCAGGGTCAGGCAGACTCCAGACCCTCTCTGTTCAACCGCTCTCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCTTCCTCGGTAAGGCATCGGATATTATTCGCACAGGGAAACACGGGACAGGGGAACACTTGGGCTaGTCCCTTTCAATCTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ELFLGKASDIIRTGKHGTGEHLG*SLSILG Trigger: GCCCAAGATTGAAAGGGACAAGCCCAAGTGTTCCCC...TGTCCCGTGTTTCCCTGTGCGAATAATATCCGATGCCTTACCGAGGAAGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR GCA 72 bp | GGTGTGCCCTTAAGTCAAATGAGCCCAGCAAGCCCCTaGAACAACCCATCCAACAAAGCAAGGACAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GVPLSQMSPASP*NNPSNKARTAI Trigger: AATGGCTGTCCTTGCTTTGTTGGATGGGTTGTTGCAGGGGCTTGCTGGGCTCATTTGACTTAAGGGCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CAAGAATCCTCTTTGAGAGGTCAGGTCAACCACTCCTaGAGAAGTAGGTCTCCTGGGAATGTTCTGCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QESSLRGQVNHS*RSRSPGNVLPG Trigger: TCCGGGCAGAACATTCCCAGGAGACCTACTTCTCCAGGAGTGGTTGACCTGACCTCTCAAAGAGGATTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | TTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTaGCTTTCAGCTGAAGCCGCAGACACAAATAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LAPEDSGHVHLA*LSAEAADTNKV Trigger: AACCTTATTTGTGTCTGCGGCTTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CCATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTaGCTTGGCTTTCAGCTGAAGCCGCAGACACAAATA | + |
|
Preference number: 3 (lower is better) Translates to: PFWPQRTVGTFI*LGFQLKPQTQI Trigger: TATTTGTGTCTGCGGCTTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | GCAACAACCCATCCAACAAAGCAAGGACAGCCATTTTaGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ATTHPTKQGQPF*PQRTVGTFIWL Trigger: AAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAATGGCTGTCCTTGCTTTGTTGGATGGGTTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CCGCAGACACAAATAAGGTTTCCTTGTCTAGAGGAATaGGAGCCACATGCAGTATTCCATGAGGCTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQTQIRFPCLEE*EPHAVFHEAAG Trigger: CCCTGCAGCCTCATGGAATACTGCATGTGGCTCCCATTCCTCTAGACAAGGAAACCTTATTTGTGTCTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CAGGATCTGCTTAATTTGCCATGGGAAGAGATAGTGTaGACCCAGCATGTAGAGTTTGGCCAGAGCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDLLNLPWEEIV*TQHVEFGQSSG Trigger: CCCTGAGCTCTGGCCAAACTCTACATGCTGGGTCCACACTATCTCTTCCCATGGCAAATTAAGCAGATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTTTCAATCAGAGCATTTTCTCTTTaGCCTTCAAGACACGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLTPLGFLGEHLGLSLSIRAFSL*PSRHGS Trigger: TGAGCCGTGTCTTGAAGGCAAAAGAGAAAATGCTCT...GATTGAAAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR TCA 72 bp | TCTCGCATCATTACAATATTCTGTGGTTCTGGAAGTTaGGGGACATGGAACTTGGCCACGCGGGTCACAACA | + |
|
Preference number: 3 (lower is better) Translates to: SRIITIFCGSGS*GTWNLATRVTT Trigger: TGTTGTGACCCGCGTGGCCAAGTTCCATGTCCCTCAACTTCCAGAACCACAGAATATTGTAATGATGCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | GAACACATCTCGCATCATTACAATATTCTGTGGTTCTaGAAGTTGAGGGACATGGAACTTGGCCACGCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EHISHHYNILWF*KLRDMELGHAG Trigger: ACCCGCGTGGCCAAGTTCCATGTCCCTCAACTTCCAGAACCACAGAATATTGTAATGATGCGAGATGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR TCA 72 bp | GTGTGGCATTTCGGGCTCTCAAGTCCAGAGCACAGATaGGAACACATCTCGCATCATTACAATATTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VWHFGLSSPEHR*EHISHHYNILW Trigger: CCACAGAATATTGTAATGATGCGAGATGTGTTCTCATCTGTGCTCTGGACTTGAGAGCCCGAAATGCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | CTTCTTGAAGTGAAAATCAATATTGAGGGAAACACATaGTCAGAGGTCAAGCAGCCATCACCCTGGGCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLEVKINIEGNT*SEVKQPSPWAV Trigger: AACGGCCCAGGGTGATGGCTGCTTGACCTCTGACCATGTGTTTCCCTCAATATTGATTTTCACTTCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CCA 72 bp | GGGCTTGTCCCTTTCAATCTTGGGCTGACTCTTAATTaGCTTCTTGAAGTGAAAATCAATATTGAGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLVPFNLGLTLN*LLEVKINIEGN Trigger: GTTTCCCTCAATATTGATTTTCACTTCAAGAAGCCAATTAAGAGTCAGCCCAAGATTGAAAGGGACAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR TCA 90 bp | AGCATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCCCTGGGGGAGCCTGGCTTCAGGGTAGTGGCCAATaGCCTCGCTGTAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIHWLAGGMLCGPGGAWLQGSGQ*PRCRWG Trigger: CCCCCACCTACAGCGAGGTCATTGGCCACTACCCTG...AAGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR TCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACGGGGCAATGTGCGAGTaGTGGAGCCGGGTCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSPTVGCSRHGEIPSADGAMCE*WSRVPS Trigger: AGAGGGGACCCGGCTCCATCACTCGCACATTGCCCC...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTTTCAGGGGCGGCCCCTCCATaGGCCCACCGCTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLTPLGFLGEHLGLSLSGAAPP*AHRCCS Trigger: GCTACAGCAGCGGTGGGCGCATGGAGGGGCCGCCCC...TGAAAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCTCCCACAGTCGGGTGCTCCAGGCACGGAGAAATCCCAAGTGCTGACCAGCGAGTCGGTCAGTaGGCCGAGGCGGGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQSPTVGCSRHGEIPSADQRVGQ*AEAGHR Trigger: TCTATGCCCCGCCTCGGCCCACTGACCGACTCGCTG...GTCAGCACTTGGGATTTCTCCGTGCCTGGAGCACCCGACTGTGGGAGACTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAACGCGCAGGAGACATTaGGCTGCCCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAPEDSGHVHLAWLSAETRRRH*AARRRR Trigger: CCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGT...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CAA 72 bp | TGTTCACAGCCTGTCTGGACAGAAGCATCCATTGGCTaGCAGGCGGCATGCTGTGTGGCCCTGGGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSQPVWTEASIG*QAACCVALGEP Trigger: AGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCTGTGAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CAA 72 bp | ACGGGCCGCTGGTGCTGGCAGTCTTTCCTAACCCCTTaGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGRWCWQSFLTP*GFLGEHLGLSL Trigger: AAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAAAGACTGCCAGCACCAGCGGCCCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGGGCCTCTGCAAGCAGGGTACATGCATGCTGAGGGAAGGGAAGGGAAGTTCAGCTCCAGCTGTTaGTCAGGGTCCCGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPLQAGYMHAEGREGKFSSSC*SGSRSW Trigger: CCAGCTACGGGACCCTGAGCAACAGCTGGAGCTGAA...CTTCCCTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | AGCATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCCCTGGGGGAGCCTGGCTTCAGACAGTGAGATGGTaGGTGGCAGGGCAATTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHWLAGGMLCGPGGAWLQTVRW*VAGQFR Trigger: ACGAAATTGCCCTGCCACCCACCATCTCACTGTCTG...AAGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CAA 72 bp | GTAACTGTTCACAGCCTGTCTGGACAGAAGCATCCATaGGCTTGCAGGCGGCATGCTGTGTGGCCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVHSLSGQKHP*ACRRHAVWPWG Trigger: CCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCTGTGAACAGTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR GCA 90 bp | AGCCTGTCTGGACAGAAGCATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCCCGATGGCCCGTTACTTTaGTGGTGCTGGAAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSGQKHPLACRRHAVWPDGPLL*WCWKEE Trigger: CTCCTCCTTCCAGCACCAGCAAAGTAACGGGCCATC...GGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCTTCTGTCCAGACAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR TCA 90 bp | TTCCTAACCCCTTTGGGCTTCCTGGGGGAACACTTGGGCTTGTCCCTTTCAATCGATGAAGGAGCGGGCTaGCAGCTTGTAGTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTPLGFLGEHLGLSLSIDEGAG*QLVVAQ Trigger: CTGAGCCACTACAAGCTGTCAGCCCGCTCCTTCATC...GATTGAAAGGGACAAGCCCAAGTGTTCCCCCAGGAAGCCCAAAGGGGTTAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAGGGAACAAAGAGCGCTaGCAGTTGCACGCGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILAPEDSGHVHLAWLSAEGNKER*QLHAQE Trigger: CTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTTCCC...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAATCTCTCCTCCTGGCCTaGCTGTGTCGGCTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILAPEDSGHVHLAWLSAESLLLA*LCRLMK Trigger: CTTCATCAGCCGACACAGCCAGGCCAGGAGGAGAGA...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CAA 72 bp | GCCATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTaGGCTTGGCTTTCAGCTGAAGCCGCAGACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AILAPEDSGHVH*AWLSAEAADTN Trigger: ATTTGTGTCTGCGGCTTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGCATCCTACATACTAATTACATGCTGGGAAATGAGACCCCAGTCCCGCTACCGTTACTTTGCTGGTaGTGGAAGGAGGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSILHTNYMLGNETPVPLPLLCW*WKEEPG Trigger: CCCTGGCTCCTCCTTCCAGCACCAGCAAAGTAACGG...TAGCGGGACTGGGGTCTCATTTCCCAGCATGTAATTAGTATGTAGGATGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCCTCTAGGGGTCCCAGCATCCTACATACTAATTACATGCTGGGAAATAAGAGCGCTGGCAGTTaGACGCGCAGGAGACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPSRGPSILHTNYMLGNKSAGS*TRRRHW Trigger: CCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTT...ATTTCCCAGCATGTAATTAGTATGTAGGATGCTGGGACCCCTAGAGGGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTTCCTCGGTAAGGCATCGGATATTATTCGCACAGGGAAACACGGGACACTCCTTGTTCTCCAGTaGGGCAATGTGCGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELFLGKASDIIRTGKHGTLLVLQ*GNVRVM Trigger: CATCACTCGCACATTGCCCCACTGGAGAACAAGGAG...TGTCCCGTGTTTCCCTGTGCGAATAATATCCGATGCCTTACCGAGGAAGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| 3UTR CAA 72 bp | ACCCACATCCAAGGGACCCCAGTTTCTAGTCCAGGGTaGTTACCCAAAGGAGTAGGTGTGCCCTTAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THIQGTPVSSPG*LPKGVGVPLSQ Trigger: TTGACTTAAGGGCACACCTACTCCTTTGGGTAACAACCCTGGACTAGAAACTGGGGTCCCTTGGATGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCAACTAAGAACAATGAAGGAAAGACTAGTAGAGCATTTTCTCTTTTGCCTTGTAGCAGGTGGCGCTaGTGCCCGAGTTACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSTKNNEGKTSRAFSLLPCSRWR*CPSYCW Trigger: CCAGCAGTAACTCGGGCATCAGCGCCACCTGCTACA...AGGCAAAAGAGAAAATGCTCTACTAGTCTTTCCTTCATTGTTCTTAGTTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS-3UTR CCA 90 bp | GGGCTGACTCTTAATTGGCTTCTTGAAGTGAAAATCAATATTGAGGGAAACACAGGCCCGTTACTTTGCTaGTGCTGGAAGGAGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLTLNWLLEVKINIEGNTGPLLC*CWKEEP Trigger: TGGCTCCTCCTTCCAGCACCAGCAAAGTAACGGGCC...TGTGTTTCCCTCAATATTGATTTTCACTTCAAGAAGCCAATTAAGAGTCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS-3UTR CAA 90 bp | AGCATCCATTGGCTTGCAGGCGGCATGCTGTGTGGCCCTGGGGGAGCCTGGCTTGGATGGCCCGTTACTTaGCTGGTGCTGGAAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SIHWLAGGMLCGPGGAWLGWPVT*LVLEGG Trigger: TCCTCCTTCCAGCACCAGCAAAGTAACGGGCCATCC...AAGCCAGGCTCCCCCAGGGCCACACAGCATGCCGCCTGCAAGCCAATGGATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS-3UTR CAA 90 bp | AGCAAGCCCTCTAGGGGTCCCAGCATCCTACATACTAATTACATGCTGGGAAATCACGCGCAGGAGACATaGGGCTGCCCGGCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SKPSRGPSILHTNYMLGNHAQET*GCPAAA Trigger: CGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTG...ATTTCCCAGCATGTAATTAGTATGTAGGATGCTGGGACCCCTAGAGGGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS GCA 90 bp | GGTGCTGTCTATAAGGTCACTGTCGAAGATGGTCCGGTTAGGGGGTaGGCGCACAGATTCCCGGTTCAGCTCCAGCTGTTGCTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GAVYKVTVEDGPVRG*AHRFPVQLQLLLRV Trigger: GACCCTGAGCAACAGCTGGAGCTGAACCGGGAATCTGTGCGCGCACCCCCTAACCGGACCATCTTCGACAGTGACCTTATAGACAGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTGCTGTATCCACCTGGCACCAAATTCGGGGACTGCTTTGGCTTTGGGGAGTAGGGGTAGGTGGGTaGGAATCGGCTCCGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PAAVSTWHQIRGLLWLWGVGVGG*ESAPLD Trigger: ATCCAGCGGAGCCGATTCCAACCCACCTACCCCTAC...TCCCCAAAGCCAAAGCAGTCCCCGAATTTGGTGCCAGGTGGATACAGCAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS TCA 90 bp | GTCTCTCCTCCTGGCCTGGCTGTGTCGGCTGATGAAGGAGCGGGCTaGCAGCTTGTAGTGGCTCAGCAGGCACGTAATCATAACCACCAT | + |
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Preference number: 5 (lower is better) Translates to: VSPPGLAVSADEGAG*QLVVAQQARNHNHH Trigger: ATGGTGGTTATGATTACGTGCCTGCTGAGCCACTACAAGCTGTCAGCCCGCTCCTTCATCAGCCGACACAGCCAGGCCAGGAGGAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS-3UTR CAA 90 bp | AGCTGGGGGCCTCTGCAAGCAGGGTACATGCATGCTGAGGGAAGGGAAGGGAAGTGTTTCTCCTTCTCCTaGTTCTCCAGTGGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SWGPLQAGYMHAEGREGKCFSFS*FSSGAM Trigger: CATTGCCCCACTGGAGAACAAGGAGAAGGAGAAACA...CTTCCCTTCCCTTCCCTCAGCATGCATGTACCCTGCTTGCAGAGGCCCCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS-3UTR CAA 90 bp | ATTTTGGCCCCAGAGGACAGTGGGCACGTTCATTTGGCTTGGCTTTCAGCTGAAAAAGAGCGCTGGCAGTaGCACGCGCAGGAGACATTG | + |
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Preference number: 5 (lower is better) Translates to: ILAPEDSGHVHLAWLSAEKERWQ*HAQETL Trigger: CAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTT...TTCAGCTGAAAGCCAAGCCAAATGAACGTGCCCACTGTCCTCTGGGGCCAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS GCA 72 bp | GAGCGCTGGCAGTTGCACGCGCAGGAGACATTGGGCTaGCCGGCGGCGGCGGCGGCGGTGCCGTTGACCCCC | + |
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Preference number: 6 (lower is better) Translates to: ERWQLHAQETLG*PAAAAAVPLTP Trigger: GGGGGTCAACGGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS CAA 72 bp | AACAAAGAGCGCTGGCAGTTGCACGCGCAGGAGACATaGGGCTGCCCGGCGGCGGCGGCGGCGGTGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: NKERWQLHAQET*GCPAAAAAVPL Trigger: CAACGGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS CAA 90 bp | TCCAGCTCCGTGATCTCCATGCTGGGGAACAAAGAGCGCTGGCAGTaGCACGCGCAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SSSVISMLGNKERWQ*HAQETLGCPAAAAA Trigger: CGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTTCCCCAGCATGGAGATCACGGAGCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS CAA 90 bp | TCGGGGTTCCTGATCTCCATGCTGGGGAACAAAGAGCGCTGGCAGTaGCACGCGCAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SGFLISMLGNKERWQ*HAQETLGCPAAAAA Trigger: CGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTTCCCCAGCATGGAGATCAGGAACCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139306.2 |
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| CDS CAA 72 bp | GTGATCTCCATGCTGGGGAACAAAGAGCGCTGGCAGTaGCACGCGCAGGAGACATTGGGCTGCCCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VISMLGNKERWQ*HAQETLGCPAA Trigger: CGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTTCCCCAGCATGGAGATCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036248.13 |
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| CDS CAA 72 bp | CTGATCTCCATGCTGGGGAACAAAGAGCGCTGGCAGTaGCACGCGCAGGAGACATTGGGCTGCCCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LISMLGNKERWQ*HAQETLGCPAA Trigger: CGCCGCCGGGCAGCCCAATGTCTCCTGCGCGTGCAACTGCCAGCGCTCTTTGTTCCCCAGCATGGAGATCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139306.2 |
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| CDS CCA 72 bp | CCTTCCGAGGACAGTCCATCGTCTCTCCTCCTGGCCTaGCTGTGTCGGCTGATGAAGGAGCGGGCTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: PSEDSPSSLLLA*LCRLMKERADS Trigger: GCTGTCAGCCCGCTCCTTCATCAGCCGACACAGCCAGGCCAGGAGGAGAGACGATGGACTGTCCTCGGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS TCA 72 bp | CCTGGCCTGGCTGTGTCGGCTGATGAAGGAGCGGGCTaGCAGCTTGTAGTGGCTCAGCAGGCACGTAATCAT | + |
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Preference number: 6 (lower is better) Translates to: PGLAVSADEGAG*QLVVAQQARNH Trigger: ATGATTACGTGCCTGCTGAGCCACTACAAGCTGTCAGCCCGCTCCTTCATCAGCCGACACAGCCAGGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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| CDS TCA 72 bp | CACGATGACCACGATTTGCACGAACTCCAGCTCCGCTaGGTACAACACAGGGTGACCGTGGTGACTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HDDHDLHELQLR*VQHRVTVVTVV Trigger: CACCACAGTCACCACGGTCACCCTGTGTTGTACTCAGCGGAGCTGGAGTTCGTGCAAATCGTGGTCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139306.2 |
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| CDS GCA 72 bp | TATAAGGTCACTGTCGAAGATGGTCCGGTTAGGGGGTaGGCGCACAGATTCCCGGTTCAGCTCCAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: YKVTVEDGPVRG*AHRFPVQLQLL Trigger: CAACAGCTGGAGCTGAACCGGGAATCTGTGCGCGCACCCCCTAACCGGACCATCTTCGACAGTGACCTTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036248.13 ENSMUST00000139306.2 |
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