Pregenerated sensors for PMEL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025359Ensembl transcript IDs: ENSMUST00000054125.9, ENSMUST00000217836.2, ENSMUST00000219157.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATTTCAGATATaGGTAGTCTCGAAGGGAAGACTGCAGAAAACACAGGCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ATKALPQGSENLFQI*VVSKGRLQKTQALL Trigger: CAGCAGTGCCTGTGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGCTCTGGGCAGGGGGCTaGCACCCTGGTGATGAAATG | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALLWAGG*HPGDEM Trigger: CATTTCATCACCAGGGTGCCAGCCCCCTGCCCAGAG...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGGTACCACCTGGGCAGTaGCTGAGCCCGACTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMVPPGQ*LSPTPG Trigger: ACCTGGAGTCGGGCTCAGTCACTGCCCAGGTGGTAC...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGTTGGGTGCTGGCCACTaGCAGGCTGTTGGCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMLGAGH*QAVGVS Trigger: GCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAA...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGTGTGGTACCCGGGACTaGGGAGGAACCACAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALCGTRD*GGTTGN Trigger: GTTTCCTGTGGTTCCTCCCCAGTCCCGGGTACCACA...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGATGCATCCCCTTCACTaGATGGCACAGCCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALMHPLH*MAQPAG Trigger: TCCTGCAGGCTGTGCCATTCAGTGAAGGGGATGCAT...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGGGCAGGCGCAGCCAGTaGGTGCTACCATGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMGRRSQ*VLPCGI Trigger: AATGCCACATGGTAGCACTCACTGGCTGCGCCTGCC...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGTTCTCAGGAAGTGCTTaGTCTCTCCGTCCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALFSGSA*SLRPRP Trigger: AGGCCTTGGACGGAGAGACCAAGCACTTCCTGAGAA...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | AGACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTCCACTGCCAGGCTGTTaGCGTCAGCCAAAGACACAT | + |
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Preference number: 4 (lower is better) Translates to: RLQKTQALLSTPGNPRCLPLPGC*RQPKTH Trigger: ATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGG...AAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | AGACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGGAAAAGGAGGCATTTaGACCAACCAGTGTAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RLQKTQALLSTPGNPRCLGKGGI*TNQCRP Trigger: GGGCCTACACTGGTTGGTGCAAATGCCTCCTTTTCC...AAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGGCTGAGGTCAGCATCTaGTCAGATGTAGTAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALAEVSI*SDVVAV Trigger: CACAGCTACTACATCTGAGCAGATGCTGACCTCAGC...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGGGAAGTGCAGGGCAATaGAAAAGGAGGCATTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DCRKHRHCCQPQEIHGALGSAGQ*KRRHLH Trigger: GTGCAAATGCCTCCTTTTCCATTGCCCTGCACTTCC...CAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGTGTCCTCCCCACACCTaGCTCCCATTGATGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMCPPHT*LPLMMV Trigger: CACCATCATCAATGGGAGCCAGGTGTGGGGAGGACA...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | AGACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTATCATCAGGCTCCTGTaGATACACTGGCTGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLQKTQALLSTPGNPRCLIIRLL*IHWLSS Trigger: GGAGGACAGCCAGTGTATCCACAGGAGCCTGATGAT...AAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | AGACTGCAGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTCACTCGGGGTACAGCTaGCTGTTCCAGGTTTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: RLQKTQALLSTPGNPRCLHSGYS*LFQVLV Trigger: AACTAAAACCTGGAACAGGCAGCTGTACCCCGAGTG...AAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCTGCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGTTGGCCCAGATAACCTaGCCATCCGGTAGTACCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMLAQIT*PSGSTF Trigger: AAAGGTACTACCGGATGGTCAGGTTATCTGGGCCAA...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGCTACCATGTGGCATTTaGGAAACTGAGCCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RKHRHCCQPQEIHGALRMLPCGI*ETEPCF Trigger: GAAGCAGGGCTCAGTTTCCCAAATGCCACATGGTAG...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GAACAAATAAACGAACAGCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATGCCTGCAGTACCACCTaGGCAGTGACTGAGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: EQINEQQQKPSRKVLRIYACSTT*AVTEPD Trigger: GTCGGGCTCAGTCACTGCCCAGGTGGTACTGCAGGC...ATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGCTGTTCGTTTATTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGCACCTGGGCAGTGACTaGGCCCGACTCCAGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQHLGSD*ARLQVS Trigger: ACTTACCTGGAGTCGGGCTCAGTCACTGCCCAGGTG...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | CTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGAAGAGGAATGGCAGCCTaGAGTACCACCTGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LPQGSENLFQILVVSKGRRGMAA*STTWAV Trigger: CACTGCCCAGGTGGTACTGCAGGCTGCCATTCCTCT...TCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATCTCGGTGGAACAGACTaGCACAGCCTCTGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FSITLTPLQTDLKADRTNLGGTD*HSLWAG Trigger: CCCTGCCCAGAGGCTGTGCCAGTCTGTTCCACCGAG...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGCTGGGGTCGTGGAGCTaGAGGGCAAAGATGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQLGSWS*RAKMRG Trigger: TCCTCTCATCTTTGCCCTTCAGCTCCACGACCCCAG...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | CTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGAAGTAATGGTGAAGGTTaGACTGGCGTGAGCAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPQGSENLFQILVVSKGRSNGEG*TGVSKG Trigger: CCCCTTGCTCACGCCAGTTCAACCTTCACCATTACT...TCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGGTGAGTGACATCAAGTaGCCGAGAGATCAGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQVSDIK*PRDQGP Trigger: GGGACCCTGATCTCTCGGGCACTTGATGTCACTCAC...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATCTCCTGTGGATACACTaGCTGTCCTCCCCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: FSITLTPLQTDLKADRTNLLWIH*LSSPHL Trigger: CAGGTGTGGGGAGGACAGCCAGTGTATCCACAGGAG...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATTTGGGTAGCCCGCCTTaGCAGGACACAGTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FSITLTPLQTDLKADRTNLGSPP*QDTVSS Trigger: TGAGCTGACTGTGTCCTGCCAAGGCGGGCTACCCAA...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATAAAGCAGTCTGGGCTCGGTaGAACAGACTGGCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SITLTPLQTDLKADRTNKAVWAR*NRLAQP Trigger: AGGCTGTGCCAGTCTGTTCCACCGAGCCCAGACTGC...TTTATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | CTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACCACCTTTCAGCACTTaGTGTAGAACCAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQGSENLFQILVVSKGRPPFST*CRTSWQ Trigger: CTGCCAGCTGGTTCTACACCAAGTGCTGAAAGGTGG...TCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAACAACAAGTTGGGTGCTaGCCACTGCCAGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GSENLFQILVVSKGRLQKQQVGC*PLPGCW Trigger: CCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTG...TTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGTGTACCCTCTGTAGTTaGCACCTCTGCCAGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQCTLCS*HLCQCG Trigger: ACCACACTGGCAGAGGTGTCAACTACAGAGGGTACA...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | TCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATAAACTTCCATTGTGTGTGTaGCCAGCTTTGCGTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SITLTPLQTDLKADRTNKLPLCV*PALRGP Trigger: CGGGCCACGCAAAGCTGGGCACACACACAATGGAAG...TTTATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATGAACAACAAGTTGGGTaGTGGCCACTGCCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSITLTPLQTDLKADRTNEQQVG*WPLPGC Trigger: ACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTC...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCAGGAAACAAGAGGAATaGCAGCCTGCAGTACCACCT | + |
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Preference number: 4 (lower is better) Translates to: ATKALPQGSENLFQILVVRKQEE*QPAVPP Trigger: AGGTGGTACTGCAGGCTGCCATTCCTCTTGTTTCCT...GACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | CTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGAAGGTGCTTCTGCAGTTaGCATGTAGCCATCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LPQGSENLFQILVVSKGRRCFCS*HVAICG Trigger: ACCACAGATGGCTACATGCCAACTGCAGAAGCACCT...TCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | GCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTGTGTAGTTGGCATCTaGCCAGGTGTAGTACCCACA | + |
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Preference number: 4 (lower is better) Translates to: ATKALPQGSENLFQILVVCVVGI*PGVVPT Trigger: TGTGGGTACTACACCTGGCCAGATGCCAACTACACA...GACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACAAACCAGCTGGCAGTCTaGGCTCGGTGGAACAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTNQLAV*ARWNRL Trigger: CAGTCTGTTCCACCGAGCCCAGACTGCCAGCTGGTT...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| 3UTR CAA 72 bp | GCCCTCCCGCAAGGTTCTGAGAATTTATTTCAGATATaGGTAGTCTCGAAGGGAAGACTGCAGAAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: ALPQGSENLFQI*VVSKGRLQKTQ Trigger: CTGTGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTGCGGGAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | GGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAGAGGCAATATGTCCCTaGGCCACCTTTCAGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GSENLFQILVVSKGRLQKEAICP*ATFQHL Trigger: CAAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTC...TTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | TCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATAAAACACCAAGCCAGTCCTaGTTCCTGGATCCTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SITLTPLQTDLKADRTNKTPSQS*FLDPSR Trigger: CCTAGAAGGATCCAGGAATCAGGACTGGCTTGGTGT...TTTATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | TCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATAAATCCGGTAGTACCTTTTaGCTTCCAGGGAAGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SITLTPLQTDLKADRTNKSGSTF*LPGKCR Trigger: CCTGCACTTCCCTGGAAGTCAAAAGGTACTACCGGA...TTTATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACACCAGGTAAGTGTGAGTaGCATCAAGTGCCCGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTPGKCE*HQVPER Trigger: TCTCTCGGGCACTTGATGTCACTCACACTTACCTGG...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR GCA 90 bp | GAACAAATAAACGAACAGCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATCACAGTCAGCTCAAATaGATCCCCTTCACTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: EQINEQQQKPSRKVLRIYHSQLK*IPFTEW Trigger: CCATTCAGTGAAGGGGATGCATTTGAGCTGACTGTG...ATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGCTGTTCGTTTATTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAGTTACAAGTTGTCTTaGGACACCAAGCCAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQSYKLS*DTKPVL Trigger: CAGGACTGGCTTGGTGTCCCAAGACAACTTGTAACT...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACATCCAAGGCCTGTAGCTaGGACACACTCACGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTSKACS*DTLTEK Trigger: TTTCTCCGTGAGTGTGTCCCAGCTACAGGCCTTGGA...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACAATCCCCTTCACTGAATaGCACAGCCTGCAGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTIPFTE*HSLQDL Trigger: GAGATCCTGCAGGCTGTGCCATTCAGTGAAGGGGAT...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGGCAAAGATGAGAGGATaGTTTCTCAGGAAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSENLFQILVVSKGRLQAKMRG*FLRKCL Trigger: CAAGCACTTCCTGAGAAATCATCCTCTCATCTTTGC...CTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATAGATGTGGTTCCAGGTaGTTCTGCAGTTGGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSITLTPLQTDLKADRTNRCGSR*FCSWHV Trigger: TACATGCCAACTGCAGAAGCACCTGGAACCACATCT...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACATGTGGTTGTTGCTTGTaGAACGGTGGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTCGCCL*NGGSRR Trigger: CCTTCTGGAACCACCGTTGCACAAGCAACAACCACA...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAACCTATGTATCAGAGATaGAAGGACCACAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSENLFQILVVSKGRLQKPMYQR*KDHSHQ Trigger: TTGGTGGCTGTGGTCCTTGCATCTCTGATACATAGG...TTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACATGGCATTTGGGAAACTaGGCCCTGCTTCTTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SENLFQILVVSKGRLQKTWHLGN*ALLLKS Trigger: AGACTTAAGAAGCAGGGCTCAGTTTCCCAAATGCCA...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAATGCTTCTTAAGTCTATaGCTATGTATCAGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSENLFQILVVSKGRLQKCFLSL*LCIRDA Trigger: TGCATCTCTGATACATAGGCATAGACTTAAGAAGCA...TTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | ACCAGCTGGCAGTCTGGGCTCGGTGGAACAGACTGGCACAGCCTCTaGGCAGGGGGCTGGCACCCTGGTGATGAAATGTCCATACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSWQSGLGGTDWHSL*AGGWHPGDEMSIQA Trigger: AGCCTGTATGGACATTTCATCACCAGGGTGCCAGCCCCCTGCCCAGAGGCTGTGCCAGTCTGTTCCACCGAGCCCAGACTGCCAGCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS GCA 90 bp | TTGTGTGGGCAGCAATGGGCTGGCATCTGGACCCTCTGTGGTTGTTaGTTGTGCAACGGTGGTTCCAGAAGGCCTTGTGGGTGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LCGQQWAGIWTLCGC*LCNGGSRRPCGCGT Trigger: GGTACCACACCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTGCTGCCCACACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | CAATATGTCCCTGAGCCACCTTTCAGCACTTGGTGTAGAACCAGCTaGCAGTCTGGGCTCGGTGGAACAGACTGGCACAGCCTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QYVPEPPFSTWCRTS*QSGLGGTDWHSLWA Trigger: TGCCCAGAGGCTGTGCCAGTCTGTTCCACCGAGCCCAGACTGCCAGCTGGTTCTACACCAAGTGCTGAAAGGTGGCTCAGGGACATATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | GCACCAACCAGTGTAGGCCCATCATTAATGACCCTCAGAGATACCTaGCCACCTCTCCAGCAGTTAGACCCCTGCACCTCTGTCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: APTSVGPSLMTLRDT*PPLQQLDPCTSVHS Trigger: CGAGTGGACAGAGGTGCAGGGGTCTAACTGCTGGAGAGGTGGCCAGGTATCTCTGAGGGTCATTAATGATGGGCCTACACTGGTTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS TCA 90 bp | GCCCGCCTTGGCAGGACACAGTCAGCTCAAATGCATCCCCTTCACTaGATGGCACAGCCTGCAGGATCTCAGCACTTTCAATACCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARLGRTQSAQMHPLH*MAQPAGSQHFQYPG Trigger: TCCAGGGTATTGAAAGTGCTGAGATCCTGCAGGCTGTGCCATTCAGTGAAGGGGATGCATTTGAGCTGACTGTGTCCTGCCAAGGCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS TCA 90 bp | GGGTGCTGGCCACTGCCAGGCTGTTGGCGTCAGCCAAAGACACATTaGGGCAATATGTCCCTGAGCCACCTTTCAGCACTTGGTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCWPLPGCWRQPKTH*GNMSLSHLSALGVE Trigger: TTCTACACCAAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | ACCGTCAGGGAAGACACAGGCATCATCAGGCTCCTGTGGATACACTaGCTGTCCTCCCCACACCTGGCTCCCATTGATGATGGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVREDTGIIRLLWIH*LSSPHLAPIDDGVV Trigger: AACAACACCATCATCAATGGGAGCCAGGTGTGGGGAGGACAGCCAGTGTATCCACAGGAGCCTGATGATGCCTGTGTCTTCCCTGACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS CCA 90 bp | TGTAGTGGTTCCTTGCCTAGATGTGGTTCCAGGTGCTTCTGCAGTTaGCATGTAGCCATCTGTGGTACCCGGGACTGGGGAGGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSGSLPRCGSRCFCS*HVAICGTRDWGGTT Trigger: TGTGGTTCCTCCCCAGTCCCGGGTACCACAGATGGCTACATGCCAACTGCAGAAGCACCTGGAACCACATCTAGGCAAGGAACCACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS GCA 90 bp | AAGGCCACCGTCTTGACCAGGAACAACAAGTTGGGTGCTGGCCACTaGCAGGCTGTTGGCGTCAGCCAAAGACACATTGAGGCAATATGT | + |
|
Preference number: 5 (lower is better) Translates to: KATVLTRNNKLGAGH*QAVGVSQRHIEAIC Trigger: ACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGACGGTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS TCA 90 bp | TTCCAGGTTTTAGTTACAAGTTGTCTTGGGACACCAAGCCAGTCCTaGTTCCTGGATCCTTCTAGGGCCCCCACAGCCAGCAGAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLVTSCLGTPSQS*FLDPSRAPTASRAL Trigger: GAGTGCTCTGCTGGCTGTGGGGGCCCTAGAAGGATCCAGGAATCAGGACTGGCTTGGTGTCCCAAGACAACTTGTAACTAAAACCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS GCA 90 bp | AACTTTTGTAGTGGTTCCTTGCCTAGATGTGGTTCCAGGTGCTTCTaGAGTTGGCATGTAGCCATCTGTGGTACCCGGGACTGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NFCSGSLPRCGSRCF*SWHVAICGTRDWGG Trigger: TCCTCCCCAGTCCCGGGTACCACAGATGGCTACATGCCAACTGCAGAAGCACCTGGAACCACATCTAGGCAAGGAACCACTACAAAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | AAAGACACATTGAGGCAATATGTCCCTGAGCCACCTTTCAGCACTTaGTGTAGAACCAGCTGGCAGTCTGGGCTCGGTGGAACAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDTLRQYVPEPPFST*CRTSWQSGLGGTDW Trigger: CCAGTCTGTTCCACCGAGCCCAGACTGCCAGCTGGTTCTACACCAAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAATGTGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 90 bp | CTTCCAAACATAAACAAAGCTTCTCTTCGGAGGTTTAGGACCAGATaGGCAGGGTCCACCGTCAGGGAAGACACAGGCATCATCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPNINKASLRRFRTR*AGSTVREDTGIIRL Trigger: GAGCCTGATGATGCCTGTGTCTTCCCTGACGGTGGACCCTGCCCATCTGGTCCTAAACCTCCGAAGAGAAGCTTTGTTTATGTTTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
||
| CDS CCA 90 bp | GCCTTGGCAGGACACAGTCAGCTCAAATGCATCCCCTTCACTGAATaGCACAGCCTGCAGGATCTCAGCACTTTCAATACCCTGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALAGHSQLKCIPFTE*HSLQDLSTFNTLDN Trigger: ATTGTCCAGGGTATTGAAAGTGCTGAGATCCTGCAGGCTGTGCCATTCAGTGAAGGGGATGCATTTGAGCTGACTGTGTCCTGCCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS GCA 90 bp | GACACCTCTGCCAGTGTGGTATCTATGACCGCTGAGGTCAGCATCTaGTCAGATGTAGTAGCTGTGACCTCTGTGGTTGGCATTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: DTSASVVSMTAEVSI*SDVVAVTSVVGICT Trigger: TGTACAAATGCCAACCACAGAGGTCACAGCTACTACATCTGAGCAGATGCTGACCTCAGCGGTCATAGATACCACACTGGCAGAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAACACAGGCACTGCTGTCAACCCCAGGAAATCCACGGTGCCTTGAGAATGAGACAGTCACTTCCATaGTGTGTGTGCCCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKHRHCCQPQEIHGALRMRQSLP*CVCPAL Trigger: CAAAGCTGGGCACACACACAATGGAAGTGACTGTCT...CATTCTCAAGGCACCGTGGATTTCCTGGGGTTGACAGCAGTGCCTGTGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 90 bp | GGCATTTGTACAACTGTGGTTCCAGAGGGCTGTGTAGTTGGCATCTaGCCAGGTGTAGTACCCACAACTTTTGTAGTGGTTCCTTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GICTTVVPEGCVVGI*PGVVPTTFVVVPCL Trigger: TAGGCAAGGAACCACTACAAAAGTTGTGGGTACTACACCTGGCCAGATGCCAACTACACAGCCCTCTGGAACCACAGTTGTACAAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS GCA 90 bp | CTTTTGACTTCCAGGGAAGTGCAGGGCAATGGAAAAGGAGGCATTTaGACCAACCAGTGTAGGCCCATCATTAATGACCCTCAGAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LLTSREVQGNGKGGI*TNQCRPIINDPQRY Trigger: GTATCTCTGAGGGTCATTAATGATGGGCCTACACTGGTTGGTGCAAATGCCTCCTTTTCCATTGCCCTGCACTTCCCTGGAAGTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS-3UTR CAA 90 bp | GAACAAATAAACGAACAGCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATGCCACTGCCAGGCTGTaGGCGTCAGCCAAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: EQINEQQQKPSRKVLRIYATARL*ASAKDT Trigger: TGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGC...ATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGCTGTTCGTTTATTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CAA 90 bp | GAACAAATAAACGAACAGCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATTTTCTCAGGAAGTGCTaGGTCTCTCCGTCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQINEQQQKPSRKVLRIYFLRKC*VSPSKA Trigger: GGCCTTGGACGGAGAGACCAAGCACTTCCTGAGAAA...ATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGCTGTTCGTTTATTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CAA 90 bp | GGTTCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAACAGGTGCTTCTGCAGTaGGCATGTAGCCATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSENLFQILVVSKGRLQKQVLLQ*ACSHLW Trigger: CCACAGATGGCTACATGCCAACTGCAGAAGCACCTG...TTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CAA 90 bp | TTCTCCATTACCCTTACCCCTCTACAGACAGATTTAAAAGCAGACAGAACAAATTGGTTCCAGAAGGCCTaGTGGGTGTGGTACCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FSITLTPLQTDLKADRTNWFQKA*WVWYLY Trigger: GTACAGGTACCACACCCACAAGGCCTTCTGGAACCA...ATTTGTTCTGTCTGCTTTTAAATCTGTCTGTAGAGGGGTAAGGGTAATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CAA 90 bp | GAACAAATAAACGAACAGCAACAAAAGCCCTCCCGCAAGGTTCTGAGAATTTATCTCTGTGGTTGTTGCTaGTGCAACGGTGGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EQINEQQQKPSRKVLRIYLCGCC*CNGGSR Trigger: TCTGGAACCACCGTTGCACAAGCAACAACCACAGAG...ATAAATTCTCAGAACCTTGCGGGAGGGCTTTTGTTGCTGTTCGTTTATTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS-3UTR CAA 90 bp | TCTGAGAATTTATTTCAGATATTGGTAGTCTCGAAGGGAAGACTGCAGAAAACATCAGCCAAAGACACATaGAGGCAATATGTCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SENLFQILVVSKGRLQKTSAKDT*RQYVPE Trigger: CTCAGGGACATATTGCCTCAATGTGTCTTTGGCTGA...TGTTTTCTGCAGTCTTCCCTTCGAGACTACCAATATCTGAAATAAATTCTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | GGGCGCGGAAGACCGGAGGCAGGCGCAGCCAGTGAGTaGTACCATGTGGCATTTGGGAAACTGAGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRGRPEAGAASE*YHVAFGKLSPA Trigger: AGCAGGGCTCAGTTTCCCAAATGCCACATGGTAGCACTCACTGGCTGCGCCTGCCTCCGGTCTTCCGCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CAA 72 bp | CTGCCCAAGGCCACCGTCTTGACCAGGAACAACAAGTaGGGTGCTGGCCACTGCCAGGCTGTTGGCGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPKATVLTRNNK*GAGHCQAVGVS Trigger: GCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGACGGTGGCCTTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CAA 90 bp | CAAGGGAGCCTGCCCAAGGCCACCGTCTTGACCAGGAACAACAAGTaGGGTGCTGGCCACTGCCAGGCTGTTGGCGTCAGCCAAAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: QGSLPKATVLTRNNK*GAGHCQAVGVSQRH Trigger: GTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGACGGTGGCCTTGGGCAGGCTCCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | AGAGATACCTGGCCACCTCTCCAGCAGTTAGACCCCTaGACCTCTGTCCACTCGGGGTACAGCTGCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RDTWPPLQQLDP*TSVHSGYSCLF Trigger: GAACAGGCAGCTGTACCCCGAGTGGACAGAGGTGCAGGGGTCTAACTGCTGGAGAGGTGGCCAGGTATCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS GCA 72 bp | CAAGGCCACCGTCTTGACCAGGAACAACAAGTTGGGTaGTGGCCACTGCCAGGCTGTTGGCGTCAGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGHRLDQEQQVG*WPLPGCWRQPK Trigger: CTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGACGGTGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | GTGTGGGCAGCAATGGGCTGGCATCTGGACCCTCTGTaGTTGTTGCTTGTGCAACGGTGGTTCCAGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VWAAMGWHLDPL*LLLVQRWFQKA Trigger: GGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTGCTGCCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | GGCCACCGTCTTGACCAGGAACAACAAGTTGGGTGCTaGCCACTGCCAGGCTGTTGGCGTCAGCCAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GHRLDQEQQVGC*PLPGCWRQPKT Trigger: TGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGACGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | TGGGCTGGCATCTGGACCCTCTGTGGTTGTTGCTTGTaGAACGGTGGTTCCAGAAGGCCTTGTGGGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WAGIWTLCGCCL*NGGSRRPCGCG Trigger: ACCACACCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | CAGCAATGGGCTGGCATCTGGACCCTCTGTGGTTGTTaGTTGTGCAACGGTGGTTCCAGAAGGCCTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQWAGIWTLCGC*LCNGGSRRPCG Trigger: CCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CCA 72 bp | ACAGTCACTTCCATTGTGTGTGTGCCCAGCTTTGCGTaGCCCGTAGCAATGCTCAGCCTGGACACTGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: TVTSIVCVPSFA*PVAMLSLDTGP Trigger: GGGTCCAGTGTCCAGGCTGAGCATTGCTACGGGCCACGCAAAGCTGGGCACACACACAATGGAAGTGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 |
||
| CDS CAA 90 bp | TTTGTGTGGGCAGCAATGGGCTGGCATCTGGACCCTCTGTGGTTGTaGCTTGTGCAACGGTGGTTCCAGAAGGCCTTGTGGGTGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FVWAAMGWHLDPLWL*LVQRWFQKALWVWY Trigger: GTACCACACCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTGCTGCCCACACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CAA 90 bp | AACTTTGTGTGGGCAGCAATGGGCTGGCATCTGGACCCTCTGTGGTaGTTGCTTGTGCAACGGTGGTTCCAGAAGGCCTTGTGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: NFVWAAMGWHLDPLW*LLVQRWFQKALWVW Trigger: CCACACCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTGCTGCCCACACAAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS TCA 72 bp | AGGAATGGCAGCCTGCAGTACCACCTGGGCAGTGACTaGGCCCGACTCCAGGTAAGTGTGAGTGACATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RNGSLQYHLGSD*ARLQVSVSDIK Trigger: CTTGATGTCACTCACACTTACCTGGAGTCGGGCTCAGTCACTGCCCAGGTGGTACTGCAGGCTGCCATTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS GCA 72 bp | GTAGACAGTCACTTCCATTGTGTGTGTGCCCAGCTTTaGGTGGCCCGTAGCAATGCTCAGCCTGGACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VDSHFHCVCAQL*VARSNAQPGHW Trigger: CCAGTGTCCAGGCTGAGCATTGCTACGGGCCACGCAAAGCTGGGCACACACACAATGGAAGTGACTGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 |
||
| CDS CCA 72 bp | TCCTTGCCTAGATGTGGTTCCAGGTGCTTCTGCAGTTaGCATGTAGCCATCTGTGGTACCCGGGACTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLPRCGSRCFCS*HVAICGTRDWG Trigger: TCCCCAGTCCCGGGTACCACAGATGGCTACATGCCAACTGCAGAAGCACCTGGAACCACATCTAGGCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CAA 72 bp | CAATGGGCTGGCATCTGGACCCTCTGTGGTTGTTGCTaGTGCAACGGTGGTTCCAGAAGGCCTTGTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QWAGIWTLCGCC*CNGGSRRPCGC Trigger: ACACCCACAAGGCCTTCTGGAACCACCGTTGCACAAGCAACAACCACAGAGGGTCCAGATGCCAGCCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
||
| CDS CAA 90 bp | TGGGTGCTGGCCACTGCCAGGCTGTTGGCGTCAGCCAAAGACACATaGAGGCAATATGTCCCTGAGCCACCTTTCAGCACTTGGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WVLATARLLASAKDT*RQYVPEPPFSTWCR Trigger: TCTACACCAAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | AGTGGTTCCTTGCCTAGATGTGGTTCCAGGTGCTTCTaGAGTTGGCATGTAGCCATCTGTGGTACCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SGSLPRCGSRCF*SWHVAICGTRD Trigger: GTCCCGGGTACCACAGATGGCTACATGCCAACTGCAGAAGCACCTGGAACCACATCTAGGCAAGGAACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | GTCTTGACCAGGAACAACAAGTTGGGTGCTGGCCACTaGCAGGCTGTTGGCGTCAGCCAAAGACACATTGAG | + |
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Preference number: 6 (lower is better) Translates to: VLTRNNKLGAGH*QAVGVSQRHIE Trigger: CTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCCTGGTCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | AGGAAGTGCTTGGTCTCTCCGTCCAAGGCCTGTAGCTaGGACACACTCACGGAGAAAGGTACCTGGTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: RKCLVSPSKACS*DTLTEKGTWSV Trigger: TACTGACCAGGTACCTTTCTCCGTGAGTGTGTCCCAGCTACAGGCCTTGGACGGAGAGACCAAGCACTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | TTGAGGCAATATGTCCCTGAGCCACCTTTCAGCACTTaGTGTAGAACCAGCTGGCAGTCTGGGCTCGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LRQYVPEPPFST*CRTSWQSGLGG Trigger: TCCACCGAGCCCAGACTGCCAGCTGGTTCTACACCAAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CAA 72 bp | GCCACTGCCAGGCTGTTGGCGTCAGCCAAAGACACATaGAGGCAATATGTCCCTGAGCCACCTTTCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: ATARLLASAKDT*RQYVPEPPFST Trigger: AGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS TCA 72 bp | TTAGTTACAAGTTGTCTTGGGACACCAAGCCAGTCCTaGTTCCTGGATCCTTCTAGGGCCCCCACAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVTSCLGTPSQS*FLDPSRAPTAS Trigger: GCTGGCTGTGGGGGCCCTAGAAGGATCCAGGAATCAGGACTGGCTTGGTGTCCCAAGACAACTTGTAACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS TCA 72 bp | CCACTGCCAGGCTGTTGGCGTCAGCCAAAGACACATTaGGGCAATATGTCCCTGAGCCACCTTTCAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: PLPGCWRQPKTH*GNMSLSHLSAL Trigger: AAGTGCTGAAAGGTGGCTCAGGGACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | GCCAGTGTGGTATCTATGACCGCTGAGGTCAGCATCTaGTCAGATGTAGTAGCTGTGACCTCTGTGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASVVSMTAEVSI*SDVVAVTSVVG Trigger: GCCAACCACAGAGGTCACAGCTACTACATCTGAGCAGATGCTGACCTCAGCGGTCATAGATACCACACTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | AGTGTAGGCCCATCATTAATGACCCTCAGAGATACCTaGCCACCTCTCCAGCAGTTAGACCCCTGCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVGPSLMTLRDT*PPLQQLDPCTS Trigger: AGAGGTGCAGGGGTCTAACTGCTGGAGAGGTGGCCAGGTATCTCTGAGGGTCATTAATGATGGGCCTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS CAA 72 bp | GGAACAACAAGTTGGGTGCTGGCCACTGCCAGGCTGTaGGCGTCAGCCAAAGACACATTGAGGCAATATGTC | + |
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Preference number: 6 (lower is better) Translates to: GTTSWVLATARL*ASAKDTLRQYV Trigger: GACATATTGCCTCAATGTGTCTTTGGCTGACGCCAACAGCCTGGCAGTGGCCAGCACCCAACTTGTTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | ATAAACAAAGCTTCTCTTCGGAGGTTTAGGACCAGATaGGCAGGGTCCACCGTCAGGGAAGACACAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: INKASLRRFRTR*AGSTVREDTGI Trigger: GATGCCTGTGTCTTCCCTGACGGTGGACCCTGCCCATCTGGTCCTAAACCTCCGAAGAGAAGCTTTGTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS CAA 90 bp | CAGCATCTGCTCAGATGTAGTAGCTGTGACCTCTGTGGTTGGCATTaGTACAACTGTGGTTCCAGAGGGCTGTGTAGTTGGCATCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QHLLRCSSCDLCGWH*YNCGSRGLCSWHLA Trigger: GGCCAGATGCCAACTACACAGCCCTCTGGAACCACAGTTGTACAAATGCCAACCACAGAGGTCACAGCTACTACATCTGAGCAGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS GCA 72 bp | TCCAGGGAAGTGCAGGGCAATGGAAAAGGAGGCATTTaGACCAACCAGTGTAGGCCCATCATTAATGACCCT | + |
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Preference number: 6 (lower is better) Translates to: SREVQGNGKGGI*TNQCRPIINDP Trigger: AGGGTCATTAATGATGGGCCTACACTGGTTGGTGCAAATGCCTCCTTTTCCATTGCCCTGCACTTCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS CCA 72 bp | GGACACAGTCAGCTCAAATGCATCCCCTTCACTGAATaGCACAGCCTGCAGGATCTCAGCACTTTCAATACC | + |
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Preference number: 6 (lower is better) Translates to: GHSQLKCIPFTE*HSLQDLSTFNT Trigger: GGTATTGAAAGTGCTGAGATCCTGCAGGCTGTGCCATTCAGTGAAGGGGATGCATTTGAGCTGACTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CAA 72 bp | GGGGTACAGCTGCCTGTTCCAGGTTTTAGTTACAAGTaGTCTTGGGACACCAAGCCAGTCCTGATTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GVQLPVPGFSYK*SWDTKPVLIPG Trigger: TCCAGGAATCAGGACTGGCTTGGTGTCCCAAGACAACTTGTAACTAAAACCTGGAACAGGCAGCTGTACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054125.9 ENSMUST00000217836.2 ENSMUST00000219157.2 |
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| CDS CCA 72 bp | ACAACTGTGGTTCCAGAGGGCTGTGTAGTTGGCATCTaGCCAGGTGTAGTACCCACAACTTTTGTAGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TTVVPEGCVVGI*PGVVPTTFVVV Trigger: AACCACTACAAAAGTTGTGGGTACTACACCTGGCCAGATGCCAACTACACAGCCCTCTGGAACCACAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CCA 72 bp | CATCTGCTCAGATGTAGTAGCTGTGACCTCTGTGGTTaGCATTTGTACAACTGTGGTTCCAGAGGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HLLRCSSCDLCG*HLYNCGSRGLC Trigger: ACACAGCCCTCTGGAACCACAGTTGTACAAATGCCAACCACAGAGGTCACAGCTACTACATCTGAGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS CAA 72 bp | CTCAGATGTAGTAGCTGTGACCTCTGTGGTTGGCATTaGTACAACTGTGGTTCCAGAGGGCTGTGTAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LRCSSCDLCGWH*YNCGSRGLCSW Trigger: CCAACTACACAGCCCTCTGGAACCACAGTTGTACAAATGCCAACCACAGAGGTCACAGCTACTACATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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| CDS TCA 72 bp | CAGCCAGTGAGTGCTACCATGTGGCATTTGGGAAACTaGGCCCTGCTTCTTAAGTCTATGCCTATGTATCAG | + |
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Preference number: 6 (lower is better) Translates to: QPVSATMWHLGN*ALLLKSMPMYQ Trigger: CTGATACATAGGCATAGACTTAAGAAGCAGGGCTCAGTTTCCCAAATGCCACATGGTAGCACTCACTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054125.9 |
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