Pregenerated sensors for PMAIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024521Ensembl transcript IDs: ENSMUST00000025399.9, ENSMUST00000236933.2, ENSMUST00000237161.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATCATCGTATGATGGTTTTCATTTACTCTGAATCACGTATCTGCTaGCCACCTGCCTTTTGGGAATGTCTACTCAAGTTTCTTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: DHRMMVFIYSESRIC*PPAFWECLLKFLAS Trigger: AGAGGCAAGAAACTTGAGTAGACATTCCCAAAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACGATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR TCA 90 bp | TCGCTTCCAGTAACAGGCAAACCTAGAGAATATAAGATCATCGTATaGTGGTTTTCATTTACTCTGAATCACGTATCTGCTGGCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: SLPVTGKPREYKIIV*WFSFTLNHVSAGHL Trigger: CAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACGATGATCTTATATTCTCTAGGTTTGCCTGTTACTGGAAGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR TCA 90 bp | GGGAATGTCTACTCAAGTTTCTTGCCTCTCTCTGTTAACCAGGACTaGTTTGCTATTAAGCAGTCTGAGTGTCACATTTATAGACCAAAT | + |
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Preference number: 1 (lower is better) Translates to: GNVYSSFLPLSVNQD*FAIKQSECHIYRPN Trigger: ATTTGGTCTATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGACATTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CCA 90 bp | ACACCTTTGTGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGGTaGTTCATTTCTTATCTATTAAAGAACCGTTTTACAAAAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: TPLCTFPGVGQLDLR*FISYLLKNRFTKEQ Trigger: CTGTTCTTTTGTAAAACGGTTCTTTAATAGATAAGAAATGAACCACCTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACACAAAGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CCA 90 bp | CGTTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTaGGAAAGAACAGAACTAATTTCTGGTTTTCACCCTAAAACAGAT | + |
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Preference number: 1 (lower is better) Translates to: RSVVVIYTSIVVALR*ERTELISGFHPKTD Trigger: ATCTGTTTTAGGGTGAAAACCAGAAATTAGTTCTGTTCTTTCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CAA 90 bp | CACTTGCCTTTAATCCCAGCACCCGGGAGGCAAGGCAGGTGGAGTTaGAGGCCAGCCTGGTCTACAGAGGGAGTTCCAGGATGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HLPLIPAPGRQGRWS*RPAWSTEGVPGWPG Trigger: CCCTGGCCATCCTGGAACTCCCTCTGTAGACCAGGCTGGCCTCAAACTCCACCTGCCTTGCCTCCCGGGTGCTGGGATTAAAGGCAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | CGTATGATGGTTTTCATTTACTCTGAATCACGTATCTGCTGGCCACCTGCCTTTGGGAGGCAAGGCAGGTaGAGTTTGAGGCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RMMVFIYSESRICWPPAFGRQGR*SLRPAW Trigger: CCAGGCTGGCCTCAAACTCCACCTGCCTTGCCTCCC...AAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | AGACAGATCAACACCTTTGTGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGAAGGCAGGTGGAGTTTaGGGCCAGCCTGGTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RQINTFVYFPRSGTAGFKKAGGV*GQPGLQ Trigger: CTGTAGACCAGGCTGGCCTCAAACTCCACCTGCCTT...CTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACACAAAGGTGTTGATCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTACAGAGGGAGTTCCAGGATGGCCAGGGCTACACAGAGGAAAGGAACCCGCTTGTAGTGACCTATaGAATCAGTTTTCACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: WSTEGVPGWPGLHRGKEPACSDL*NQFSLE Trigger: TTCTAGTGAAAACTGATTTCATAGGTCACTACAAGC...GGGTTCCTTTCCTCTGTGTAGCCCTGGCCATCCTGGAACTCCCTCTGTAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | AGACAGATCAACACCTTTGTGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGAGTTTGAGGCCAGCCTaGTCTACAGAGGGAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RQINTFVYFPRSGTAGFKSLRPA*STEGVP Trigger: TGGAACTCCCTCTGTAGACCAGGCTGGCCTCAAACT...CTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACACAAAGGTGTTGATCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | CGTATGATGGTTTTCATTTACTCTGAATCACGTATCTGCTGGCCACCTGCCTTTAGTTTGAGGCCAGCCTaGTCTACAGAGGGAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RMMVFIYSESRICWPPAFSLRPA*STEGVP Trigger: TGGAACTCCCTCTGTAGACCAGGCTGGCCTCAAACT...AAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGAAAGAACGGGAGGCAAGGCAGGTaGAGTTTGAGGCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSCSHIYINCSRFTVGKNGRQGR*SLRPAW Trigger: CCAGGCTGGCCTCAAACTCCACCTGCCTTGCCTCCC...GTTCTTTCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGACCATAAATACCCATTGGGCAAGATATCTACTTTCAGGAAAACAAAACCAGAGGGAGTTCCAGGATaGCCAGGGCTACACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TDHKYPLGKISTFRKTKPEGVPG*PGLHRG Trigger: TCCTCTGTGTAGCCCTGGCCATCCTGGAACTCCCTC...TGGTTTTGTTTTCCTGAAAGTAGATATCTTGCCCAATGGGTATTTATGGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | GCATATCCCATCACTTCTGGTAGGCATCAAGACCTTGTGGTCAGAACAGGCAACAGGGAAAATACTCTATaGAATACCTGTGACAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: AYPITSGRHQDLVVRTGNRENTL*NTCDRL Trigger: TAACCTGTCACAGGTATTTCATAGAGTATTTTCCCT...GTTGCCTGTTCTGACCACAAGGTCTTGATGCCTACCAGAAGTGATGGGATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCCTTTTGGGAATGTCTACTCAAGTTTCTTGCCTCTCTCTGTTAACCAGCCCGTCTATTATTCTTaGCAACAACCTTTGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: HLPFGNVYSSFLPLSVNQPVYYS*QQPLAK Trigger: TTTTGCCAAAGGTTGTTGTCAAGAATAATAGACGGG...CTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGACATTCCCAAAAGGCAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCGTTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGACCTTCAGCCCTTGATTaGTTGTTTCCATGTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: HPFSCSHIYINCSRFTVGPSALD*LFPCLG Trigger: GCCAAGACATGGAAACAAGCAATCAAGGGCTGAAGG...TCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAACGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCGTTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGAGGTTTTCATTTACTCTaGATCACGTATCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HPFSCSHIYINCSRFTVGGFHLL*ITYLLA Trigger: GGCCAGCAGATACGTGATTCAGAGTAAATGAAAACC...TCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAACGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACAAACAACCCAGAAGTACAGATGTCCCTTCAGCAGACAGATCAACACCTTAAAAAGTCCTTACTCTaGGTGTTAGCTTTCGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KTNNPEVQMSLQQTDQHLKKSLL*VLAFAS Trigger: GGAAGCGAAAGCTAACACGCAGAGTAAGGACTTTTT...AAGGTGTTGATCTGTCTGCTGAAGGGACATCTGTACTTCTGGGTTGTTTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | AGACAGATCAACACCTTTGTGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGCTTGACAACAACCTTTaGCAAAAACAACCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: RQINTFVYFPRSGTAGFKLDNNL*QKQPEQ Trigger: TTGTTCTGGTTGTTTTTGCCAAAGGTTGTTGTCAAG...CTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACACAAAGGTGTTGATCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCATAAATACCCATTGGGCAAGATATCTACTTTCAGGAAAACAAAACCACTCCTTCATCATCCCTaGTCAGGGAACCAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: TDHKYPLGKISTFRKTKPLLHHP*SGNQKQ Trigger: TTGCTTTTGGTTCCCTGAGCAGGGATGATGAAGGAG...TGGTTTTGTTTTCCTGAAAGTAGATATCTTGCCCAATGGGTATTTATGGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTAGTCTCTTTATACTCTCCAGTTAATGCTTACAATAACACACGTAAGAGTCTCCTTCATCATCCCTaGTCAGGGAACCAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LVVSLYSPVNAYNNTRKSLLHHP*SGNQKQ Trigger: TTGCTTTTGGTTCCCTGAGCAGGGATGATGAAGGAG...ACTCTTACGTGTGTTATTGTAAGCATTAACTGGAGAGTATAAAGAGACTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACAAACAACCCAGAAGTACAGATGTCCCTTCAGCAGACAGATCAACACCTTCTTGACAACAACCTTTaGCAAAAACAACCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: KTNNPEVQMSLQQTDQHLLDNNL*QKQPEQ Trigger: TTGTTCTGGTTGTTTTTGCCAAAGGTTGTTGTCAAG...AAGGTGTTGATCTGTCTGCTGAAGGGACATCTGTACTTCTGGGTTGTTTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCGTTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGAGCTTGTAGTGACCTATaGAATCAGTTTTCACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HPFSCSHIYINCSRFTVGACSDL*NQFSLE Trigger: TTCTAGTGAAAACTGATTTCATAGGTCACTACAAGC...TCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAACGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAAGCATACATATAAATATAGTCACAGACCATAAATACCCATTGGGCAAGGGTTTTCATTTACTCTaGATCACGTATCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: FRSIHINIVTDHKYPLGKGFHLL*ITYLLA Trigger: GGCCAGCAGATACGTGATTCAGAGTAAATGAAAACC...CTTGCCCAATGGGTATTTATGGTCTGTGACTATATTTATATGTATGCTTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGAAAGAACTCTACTCAAGTTTCTTaGCTCTCTCTGTTAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSCSHIYINCSRFTVGKNSTQVS*LSLLTR Trigger: CCTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGA...GTTCTTTCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CAA 90 bp | ATGTCTACTCAAGTTTCTTGCCTCTCTCTGTTAACCAGGACTGATTaGCTATTAAGCAGTCTGAGTGTCACATTTATAGACCAAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: MSTQVSCLSLLTRTD*LLSSLSVTFIDQIK Trigger: TTTAATTTGGTCTATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAAGCATACATATAAATATAGTCACAGACCATAAATACCCATTGGGCAAGGTAGTCGCTTTACGGTaGGAAAGAACAGAACTAATT | + |
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Preference number: 2 (lower is better) Translates to: FRSIHINIVTDHKYPLGKVVALR*ERTELI Trigger: AATTAGTTCTGTTCTTTCCCACCGTAAAGCGACTAC...CTTGCCCAATGGGTATTTATGGTCTGTGACTATATTTATATGTATGCTTCTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CAA 90 bp | CTGGCACCTACTGACCTTACTATATTTTCAATTTCCTCTACTTACTaGGTAGTCTCTTTATACTCTCCAGTTAATGCTTACAATAACACA | + |
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Preference number: 2 (lower is better) Translates to: LAPTDLTIFSISSTY*VVSLYSPVNAYNNT Trigger: TGTGTTATTGTAAGCATTAACTGGAGAGTATAAAGAGACTACCAAGTAAGTAGAGGAAATTGAAAATATAGTAAGGTCAGTAGGTGCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 ENSMUST00000237161.2 |
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| 3UTR CCA 72 bp | CCCGGGAGGCAAGGCAGGTGGAGTTTGAGGCCAGCCTaGTCTACAGAGGGAGTTCCAGGATGGCCAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: PGRQGRWSLRPA*STEGVPGWPGL Trigger: TAGCCCTGGCCATCCTGGAACTCCCTCTGTAGACCAGGCTGGCCTCAAACTCCACCTGCCTTGCCTCCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTACAGAGGGAGTTCCAGGATGGCCAGGGCTACACAGAGGAAAGGAACCCCTGGGAGGTCCCTTCTaGCAAAAGCTTTGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: WSTEGVPGWPGLHRGKEPLGGPF*QKLWKN Trigger: GTTCTTCCAAAGCTTTTGCAAGAAGGGACCTCCCAG...GGGTTCCTTTCCTCTGTGTAGCCCTGGCCATCCTGGAACTCCCTCTGTAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | GCATATCCCATCACTTCTGGTAGGCATCAAGACCTTGTGGTCAGAACAGGCAACCTGGGAGGTCCCTTCTaGCAAAAGCTTTGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: AYPITSGRHQDLVVRTGNLGGPF*QKLWKN Trigger: GTTCTTCCAAAGCTTTTGCAAGAAGGGACCTCCCAG...GTTGCCTGTTCTGACCACAAGGTCTTGATGCCTACCAGAAGTGATGGGATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR GCA 72 bp | CCGAAAGAAACTCATTCCTATCTCCTTCATCATCCCTaGTCAGGGAACCAAAAGCAAGCGAGCGTTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PKETHSYLLHHP*SGNQKQASVSL Trigger: GAGAGAAACGCTCGCTTGCTTTTGGTTCCCTGAGCAGGGATGATGAAGGAGATAGGAATGAGTTTCTTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | GCATATCCCATCACTTCTGGTAGGCATCAAGACCTTGTGGTCAGAACAGGCAACTACATTGCTCTGCAGTaGTCAAAAAGCAATCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AYPITSGRHQDLVVRTGNYIALQ*SKSNPK Trigger: TTTGGGATTGCTTTTTGACAACTGCAGAGCAATGTA...GTTGCCTGTTCTGACCACAAGGTCTTGATGCCTACCAGAAGTGATGGGATATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR GCA 72 bp | GCCACCTGCCTTTTGGGAATGTCTACTCAAGTTTCTTaGCTCTCTCTGTTAACCAGGACTGATTTGCTATTA | + |
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Preference number: 3 (lower is better) Translates to: ATCLLGMSTQVS*LSLLTRTDLLL Trigger: TAATAGCAAATCAGTCCTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGACATTCCCAAAAGGCAGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR GCA 72 bp | CGTATGATGGTTTTCATTTACTCTGAATCACGTATCTaGTGGCCACCTGCCTTTTGGGAATGTCTACTCAAG | + |
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Preference number: 3 (lower is better) Translates to: RMMVFIYSESRI*WPPAFWECLLK Trigger: CTTGAGTAGACATTCCCAAAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGACCATAAATACCCATTGGGCAAGATATCTACTTTCAGGAAAACAAAACCAGTAGGCATCAAGACCTaGTGGTCAGAACAGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: TDHKYPLGKISTFRKTKPVGIKT*WSEQAT Trigger: TGTTGCCTGTTCTGACCACAAGGTCTTGATGCCTAC...TGGTTTTGTTTTCCTGAAAGTAGATATCTTGCCCAATGGGTATTTATGGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CCA 72 bp | ATGATGGTTTTCATTTACTCTGAATCACGTATCTGCTaGCCACCTGCCTTTTGGGAATGTCTACTCAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: MMVFIYSESRIC*PPAFWECLLKF Trigger: AAACTTGAGTAGACATTCCCAAAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGTAGTCTCTTTATACTCTCCAGTTAATGCTTACAATAACACACGTAAGAGTCTGGGAGGTCCCTTCTaGCAAAAGCTTTGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: LVVSLYSPVNAYNNTRKSLGGPF*QKLWKN Trigger: GTTCTTCCAAAGCTTTTGCAAGAAGGGACCTCCCAG...ACTCTTACGTGTGTTATTGTAAGCATTAACTGGAGAGTATAAAGAGACTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCGTTCAGTTGTAGTCATATATACATCAATTGTAGTCGCTTTACGGTGGGACCATTGGTTTTGACTTaGGTCAAAATAAAGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: HPFSCSHIYINCSRFTVGPLVLT*VKIKRG Trigger: GCCTCTCTTTATTTTGACCAAAGTCAAAACCAATGG...TCCCACCGTAAAGCGACTACAATTGATGTATATATGACTACAACTGAACGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR TCA 72 bp | AATATAAGATCATCGTATGATGGTTTTCATTTACTCTaGATCACGTATCTGCTGGCCACCTGCCTTTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: NIRSSYDGFHLL*ITYLLATCLLG Trigger: TCCCAAAAGGCAGGTGGCCAGCAGATACGTGATTCAGAGTAAATGAAAACCATCATACGATGATCTTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR TCA 72 bp | TACTCAAGTTTCTTGCCTCTCTCTGTTAACCAGGACTaGTTTGCTATTAAGCAGTCTGAGTGTCACATTTAT | + |
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Preference number: 3 (lower is better) Translates to: YSSFLPLSVNQD*FAIKQSECHIY Trigger: ATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGAGAGGCAAGAAACTTGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CCA 72 bp | TGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGGTaGTTCATTTCTTATCTATTAAAGAACCGTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: CTFPGVGQLDLR*FISYLLKNRFT Trigger: TGTAAAACGGTTCTTTAATAGATAAGAAATGAACCACCTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGTTAACCAGGACTGATTTGCTATTAAGCAGTCTGAGTGTCACATTTATATACATTGCTCTGCAGTaGTCAAAAAGCAATCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: SLLTRTDLLLSSLSVTFIYIALQ*SKSNPK Trigger: TTTGGGATTGCTTTTTGACAACTGCAGAGCAATGTA...TATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CCA 72 bp | GTAGTCATATATACATCAATTGTAGTCGCTTTACGGTaGGAAAGAACAGAACTAATTTCTGGTTTTCACCCT | + |
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Preference number: 3 (lower is better) Translates to: VVIYTSIVVALR*ERTELISGFHP Trigger: AGGGTGAAAACCAGAAATTAGTTCTGTTCTTTCCCACCGTAAAGCGACTACAATTGATGTATATATGACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| CDS-3UTR CCA 90 bp | AAAACAAACAACCCAGAAGTACAGATGTCCCTTCAGCAGACAGATCAACACCTTCACCCGGGTTGGGCTTaGGCTCCTCATCCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KTNNPEVQMSLQQTDQHLHPGWA*APHPAL Trigger: AAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTG...AAGGTGTTGATCTGTCTGCTGAAGGGACATCTGTACTTCTGGGTTGTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS-3UTR CCA 90 bp | TGGTTTCACGTTATCACAGCTCAAAGAACGATTTCTGAAAACTTTCCGAAAGAACACCCGGGTTGGGCTTaGGCTCCTCATCCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: WFHVITAQRTISENFPKEHPGWA*APHPAL Trigger: AAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTG...TTCTTTCGGAAAGTTTTCAGAAATCGTTCTTTGAGCTGTGATAACGTGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGTTAACCAGGACTGATTTGCTATTAAGCAGTCTGAGTGTCACATTTATAGACTTCCCAGGCATCTaGGCCAGAACCACAGTTATG | + |
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Preference number: 4 (lower is better) Translates to: SLLTRTDLLLSSLSVTFIDFPGI*ARTTVM Trigger: CATAACTGTGGTTCTGGCGCAGATGCCTGGGAAGTC...TATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS-3UTR GCA 90 bp | TTGGTAGTCTCTTTATACTCTCCAGTTAATGCTTACAATAACACACGTAAGAGTTTGGGCTCCTCATCCTaGTCTTTTGCGACTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LVVSLYSPVNAYNNTRKSLGSSS*SFATSQ Trigger: CTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAA...ACTCTTACGTGTGTTATTGTAAGCATTAACTGGAGAGTATAAAGAGACTACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| 3UTR CAA 72 bp | CAAGTTTCTTGCCTCTCTCTGTTAACCAGGACTGATTaGCTATTAAGCAGTCTGAGTGTCACATTTATAGAC | + |
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Preference number: 4 (lower is better) Translates to: QVSCLSLLTRTD*LLSSLSVTFID Trigger: GTCTATAAATGTGACACTCAGACTGCTTAATAGCAAATCAGTCCTGGTTAACAGAGAGAGGCAAGAAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| 3UTR CAA 72 bp | CGCCTTTTAAAGCTCAATTCTGTTTCTGTTCTCACTTaGAAAATCCCTTCAGCCCTTGATTGCTTGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLLKLNSVSVLT*KIPSALDCLFP Trigger: TGGAAACAAGCAATCAAGGGCTGAAGGGATTTTCAAAGTGAGAACAGAAACAGAATTGAGCTTTAAAAGGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| CDS GCA 90 bp | TCTGCTGGCACCCGGGTTGGGCTTGGGCTCCTCATCCTGCTCTTTTaGGACTTCCCAGGCATCTGCGCCAGAACCACAGTTATGTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: SAGTRVGLGLLILLF*DFPGICARTTVMSG Trigger: ACCGGACATAACTGTGGTTCTGGCGCAGATGCCTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS GCA 90 bp | TTTGTCTCCAATCCTCCGGAGTTGAGCACACTCGTCCTTCAAGTCTaGCCGCGTTGGGTTCACTGGCGCGTTCCGACGCGCCTTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FVSNPPELSTLVLQV*PRWVHWRVPTRLSP Trigger: GGGAGAAAGGCGCGTCGGAACGCGCCAGTGAACCCAACGCGGGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237161.2 |
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| CDS CCA 90 bp | CCGGAGTTGAGCACACTCGTCCTTCAAGTCTGCTGGCACCCGGGTTaGGCTTGGGCTCCTCATCCTGCTCTTTTGCGACTTCCCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PELSTLVLQVCWHPG*AWAPHPALLRLPRH Trigger: ATGCCTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAGACTTGAAGGACGAGTGTGCTCAACTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS-3UTR CAA 90 bp | AACCGGCGGAACTTCCTTCCTGGGAGGTCCCTTCTTGCAAAAGCTTTGGAAGAACTGCTGGCACCCGGGTaGGGCTTGGGCTCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: NRRNFLPGRSLLAKALEELLAPG*GLGSSS Trigger: GGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAG...TTCTTCCAAAGCTTTTGCAAGAAGGGACCTCCCAGGAAGGAAGTTCCGCCGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS GCA 90 bp | TTTGTCTCCAATCCTCCGGAGTTGAGCACACTCGTCCTTCAAGTCTaGTGGCACCCGGGTTGGGCTTGGGCTCCTCATCCTGCTCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FVSNPPELSTLVLQV*WHPGWAWAPHPALL Trigger: CAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS-3UTR CAA 90 bp | AGACAGATCAACACCTTTGTGTACTTTCCCAGGAGTGGGACAGCTGGATTTAAGCTGCTGGCACCCGGGTaGGGCTTGGGCTCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: RQINTFVYFPRSGTAGFKLLAPG*GLGSSS Trigger: GGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAG...CTTAAATCCAGCTGTCCCACTCCTGGGAAAGTACACAAAGGTGTTGATCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS TCA 90 bp | AGAAGTTTCTGCCGTAAATTCACTTTGTCTCCAATCCTCCGGAGTTaGGCACACTCGTCCTTCAAGTCTGCTGGCACCCGGGTTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RSFCRKFTLSPILRS*AHSSFKSAGTRVGL Trigger: AAGCCCAACCCGGGTGCCAGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCAGAAACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS TCA 90 bp | AGAAGTTTCTGCCGTAAATTCACTTTGTCTCCAATCCTCCGGAGTTaGGCACACTCGTCCTTCAAGTCTGCCCGCGTTGGGTTCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: RSFCRKFTLSPILRS*AHSSFKSARVGFTG Trigger: GCCAGTGAACCCAACGCGGGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCAGAAACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237161.2 |
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| CDS-3UTR CAA 90 bp | CACCTGCCTTTTGGGAATGTCTACTCAAGTTTCTTGCCTCTCTCTGTTAACCAGTGCCGTAAATTCACTTaGTCTCCAATCCTCCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HLPFGNVYSSFLPLSVNQCRKFT*SPILRS Trigger: ACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCA...CTGGTTAACAGAGAGAGGCAAGAAACTTGAGTAGACATTCCCAAAAGGCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| CDS-3UTR CAA 90 bp | AAAACAAACAACCCAGAAGTACAGATGTCCCTTCAGCAGACAGATCAACACCTTTGCCGTAAATTCACTTaGTCTCCAATCCTCCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: KTNNPEVQMSLQQTDQHLCRKFT*SPILRS Trigger: ACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCA...AAGGTGTTGATCTGTCTGCTGAAGGGACATCTGTACTTCTGGGTTGTTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000237161.2 |
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| CDS-3UTR CAA 90 bp | TTGGTAGTCTCTTTATACTCTCCAGTTAATGCTTACAATAACACACGTAAGAGTTGCCGTAAATTCACTTaGTCTCCAATCCTCCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LVVSLYSPVNAYNNTRKSCRKFT*SPILRS Trigger: ACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCA...ACTCTTACGTGTGTTATTGTAAGCATTAACTGGAGAGTATAAAGAGACTACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 ENSMUST00000237161.2 |
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| CDS CAA 72 bp | GTTGAGCTGCGAACTCAGGTGGTAGCTCTGCCCGCGTaGGGTTCACTGGCGCGTTCCGACGCGCCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VELRTQVVALPA*GSLARSDAPFS Trigger: GGAGAAAGGCGCGTCGGAACGCGCCAGTGAACCCAACGCGGGCAGAGCTACCACCTGAGTTCGCAGCTCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS GCA 72 bp | CTGCTGGCACCCGGGTTGGGCTTGGGCTCCTCATCCTaGTCTTTTGCGACTTCCCAGGCATCTGCGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLAPGLGLGSSS*SFATSQASAPE Trigger: TTCTGGCGCAGATGCCTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS CAA 72 bp | CACCCGGGTTGGGCTTGGGCTCCTCATCCTGCTCTTTaGCGACTTCCCAGGCATCTGCGCCAGAACCACAGT | + |
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Preference number: 6 (lower is better) Translates to: HPGWAWAPHPAL*RLPRHLRQNHS Trigger: ACTGTGGTTCTGGCGCAGATGCCTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS GCA 72 bp | ACCCGGGTTGGGCTTGGGCTCCTCATCCTGCTCTTTTaGGACTTCCCAGGCATCTGCGCCAGAACCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: TRVGLGLLILLF*DFPGICARTTV Trigger: AACTGTGGTTCTGGCGCAGATGCCTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS CAA 72 bp | ACTCGTCCTTCAAGTCTGCTGGCACCCGGGTTGGGCTaGGGCTCCTCATCCTGCTCTTTTGCGACTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TRPSSLLAPGLG*GSSSCSFATSQ Trigger: CTGGGAAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAGACTTGAAGGACGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS CCA 72 bp | AGCACACTCGTCCTTCAAGTCTGCTGGCACCCGGGTTaGGCTTGGGCTCCTCATCCTGCTCTTTTGCGACTT | + |
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Preference number: 6 (lower is better) Translates to: STLVLQVCWHPG*AWAPHPALLRL Trigger: AAGTCGCAAAAGAGCAGGATGAGGAGCCCAAGCCCAACCCGGGTGCCAGCAGACTTGAAGGACGAGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS TCA 72 bp | CACGTGCAATACACTTTGTCTCCGATCTTCCTGAGTTaGGCTGCGAACTCAGGTGGTAGCTCTGCCCGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HVQYTLSPIFLS*AANSGGSSARV Trigger: AACGCGGGCAGAGCTACCACCTGAGTTCGCAGCTCAACTCAGGAAGATCGGAGACAAAGTGTATTGCACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS TCA 72 bp | CACTCCACGTGCAATACACTTTGTCTCCGATCTTCCTaGGTTGAGCTGCGAACTCAGGTGGTAGCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: HSTCNTLCLRSS*VELRTQVVALP Trigger: GGGCAGAGCTACCACCTGAGTTCGCAGCTCAACTCAGGAAGATCGGAGACAAAGTGTATTGCACGTGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025399.9 |
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| CDS TCA 72 bp | TGCCGTAAATTCACTTTGTCTCCAATCCTCCGGAGTTaGGCACACTCGTCCTTCAAGTCTGCTGGCACCCGG | + |
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Preference number: 6 (lower is better) Translates to: CRKFTLSPILRS*AHSSFKSAGTR Trigger: CCGGGTGCCAGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025399.9 ENSMUST00000236933.2 |
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| CDS TCA 72 bp | TGCCGTAAATTCACTTTGTCTCCAATCCTCCGGAGTTaGGCACACTCGTCCTTCAAGTCTGCCCGCGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CRKFTLSPILRS*AHSSFKSARVG Trigger: CCCAACGCGGGCAGACTTGAAGGACGAGTGTGCTCAACTCCGGAGGATTGGAGACAAAGTGAATTTACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237161.2 |
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