Pregenerated sensors for PM20D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042251Ensembl transcript IDs: ENSMUST00000048660.12, ENSMUST00000112393.9, ENSMUST00000152989.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAATGCTAGAGCCCCAAGAGGGGTGCAGCAGCGACTGCTCCTCCTaGTGTTGGTTGTTGGCTGCTGGCTGCTGGTTGCTTGTTGGCGCT | + |
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Preference number: 1 (lower is better) Translates to: QMLEPQEGCSSDCSS*CWLLAAGCWLLVGA Trigger: AGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTCTAGCATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | GTGTTCCTCTCTTGGGAGCTCAGCCCGTACACTGTGCCAGGGAAATaGTTCTGTAGAGTAATGCTTCCTGGGGTGGGGCCGGACAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VFLSWELSPYTVPGK*FCRVMLPGVGPDSR Trigger: CCTGCTGTCCGGCCCCACCCCAGGAAGCATTACTCTACAGAAGCATTTCCCTGGCACAGTGTACGGGCTGAGCTCCCAAGAGAGGAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR TCA 90 bp | GTGGGAGCAGGGACAGGCACTGGCTGTCAGACACAGGGAGAGGTTTaGATAGGGAGAGGTCAACCCAGGGAACAGAGCTGGAGCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: VGAGTGTGCQTQGEV*IGRGQPREQSWSKE Trigger: TTCCTTGCTCCAGCTCTGTTCCCTGGGTTGACCTCTCCCTATTCAAACCTCTCCCTGTGTCTGACAGCCAGTGCCTGTCCCTGCTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | CTGCAGATACAAATGCTAGAGCCCCAAGAGGGGTGCAGCAGCGACTaGTCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTGCTGGTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LQIQMLEPQEGCSSD*SSCCWLLAAGCWLL Trigger: AAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTCTAGCATTTGTATCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CCA 90 bp | CCCTTGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTaGCTCTGGGCACCGCTGAGAAGCTGGATTTTGAGTGTTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PLVILKWDTRGPGRC*LWAPLRSWILSVPL Trigger: GAGAGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | TTCCCCTTGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTaGTGGCTCTGGGCACCGCTGAGAAGCTGGATTTTGAGTGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: FPLVILKWDTRGPGR*WLWAPLRSWILSVP Trigger: AGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | TGCAGCAGCGACTGCTCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTaGTGGTTGCTTGTTGGCGCTATCCTGACAGGATTAAACTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: CSSDCSSCCWLLAAG*WLLVGAILTGLNLP Trigger: GGGCAAGTTTAATCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR TCA 90 bp | GGAAGAGACGGAGCCTTCCAAGCTCCATTTCTGTGTCTCCCTTTGTaGCCTCCACTCCCTTGTGAGCCACAGAGCAGAGATGCTGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GRDGAFQAPFLCLPL*PPLPCEPQSRDAGL Trigger: AAGACCAGCATCTCTGCTCTGTGGCTCACAAGGGAGTGGAGGTCACAAAGGGAGACACAGAAATGGAGCTTGGAAGGCTCCGTCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CCA 90 bp | AGAGTTGGGAGGAGTTGGGAGGAGTTTGGCTACAGCTCTTCTCTGTaGAATCTATCTCCATGTCCTTGGCACAGGGAGCCAAGCAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: RVGRSWEEFGYSSSL*NLSPCPWHREPSKR Trigger: GCGCTTGCTTGGCTCCCTGTGCCAAGGACATGGAGATAGATTCCACAGAGAAGAGCTGTAGCCAAACTCCTCCCAACTCCTCCCAACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR TCA 90 bp | CTGGGACCTCAATCCCTGGTGAGTGGAGGAGGGAAGTCAGGCAGGTaGACTCTGTTCAGGATGGTTTCCACCAAACCCTTCATTAATACC | + |
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Preference number: 1 (lower is better) Translates to: LGPQSLVSGGGKSGR*TLFRMVSTKPFINT Trigger: GGTATTAATGAAGGGTTTGGTGGAAACCATCCTGAACAGAGTTCACCTGCCTGACTTCCCTCCTCCACTCACCAGGGATTGAGGTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | GGAAATGGGGCTGCTTTAGAATGTCCACAGCAGCAGACTATGATTTaGCTCATGCTTTGGCAGGGGAGTGATTGTGCCAGCTGCAGATAC | + |
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Preference number: 1 (lower is better) Translates to: GNGAALECPQQQTMI*LMLWQGSDCASCRY Trigger: GTATCTGCAGCTGGCACAATCACTCCCCTGCCAAAGCATGAGGCAAATCATAGTCTGCTGCTGTGGACATTCTAAAGCAGCCCCATTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | TGTAGGAGGCCCGATCTAACACTGCTGTTTTCAGATGATCTTGTGTaGCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGC | + |
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Preference number: 1 (lower is better) Translates to: CRRPDLTLLFSDDLV*QLLPHLSVLSVLCR Trigger: GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATCATCTGAAAACAGCAGTGTTAGATCGGGCCTCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | CGAAGACAGGAGCTCTGCTATACTTTAATGGACGCTACCTCCCTTTaGTTCTCTTGTCCTCCTTGTCCTCCACTTCCCCTTGGTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: RRQELCYTLMDATSL*FSCPPCPPLPLGHS Trigger: AGAATGACCAAGGGGAAGTGGAGGACAAGGAGGACAAGAGAAGCAAAGGGAGGTAGCGTCCATTAAAGTATAGCAGAGCTCCTGTCTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 90 bp | GCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATaGACGAGGCTTCCAATGTCTCTATATCCTTGCCAACATTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: ADSTAAVPFHIPTSE*TRLPMSLYPCQHLL Trigger: TAACAAATGTTGGCAAGGATATAGAGACATTGGAAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR CCA 90 bp | TCCGTCTGCTGGGTCTCTTTCAGGGTGAATTCAGGGTTTGGTAGATaGGTAGGGTTTGAGCTGGAGGAATGCCTCAGATTTTGTATCCAT | + |
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Preference number: 1 (lower is better) Translates to: SVCWVSFRVNSGFGR*VGFELEECLRFCIH Trigger: ATGGATACAAAATCTGAGGCATTCCTCCAGCTCAAACCCTACCCATCTACCAAACCCTGAATTCACCCTGAAAGAGACCCAGCAGACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR TCA 90 bp | AGCCCCAGCCGGCTATGTTCCCTCCCTGTGAATACTTCCCTCATGTaGTTACACACTCATGCCTCAGTAGTCATGAGAATTAAAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SPSRLCSLPVNTSLM*LHTHASVVMRIKEE Trigger: TTCTTCTTTAATTCTCATGACTACTGAGGCATGAGTGTGTAATCACATGAGGGAAGTATTCACAGGGAGGGAACATAGCCGGCTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CCA 90 bp | GTCTTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGATTGGATTaGAGAAGGATGGGAAAGCAAGAGGAACCCATAAAGCAGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: VFLSYLVSWGWKGLD*RRMGKQEEPIKQPN Trigger: ATTTGGCTGCTTTATGGGTTCCTCTTGCTTTCCCATCCTTCTCCAATCCAATCCCTTCCAACCCCACGACACTAAATAGGAGAGAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR TCA 90 bp | TTTCAAGGACATTGGACTAGTATTTGTGTTCTCTCAGGGCATGAGTaGGAACCTTTTCCCTTTGACTTAGGGTTTTACTGCTGTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: FQGHWTSICVLSGHE*EPFPFDLGFYCCEQ Trigger: CTGTTCACAGCAGTAAAACCCTAAGTCAAAGGGAAAAGGTTCTCACTCATGCCCTGAGAGAACACAAATACTAGTCCAATGTCCTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | GGACCAGGGCGCTGCTGGCTCTGGGCACCGCTGAGAAGCTGGATTTaGAGTGTTCCTCTCTTGGGAGCTCAGCCCGTACACTGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GPGRCWLWAPLRSWI*SVPLLGAQPVHCAR Trigger: CCTGGCACAGTGTACGGGCTGAGCTCCCAAGAGAGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | CCCCAAGAGGGGTGCAGCAGCGACTGCTCCTCCTGCTGTTGGTTGTaGGCTGCTGGCTGCTGGTTGCTTGTTGGCGCTATCCTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PQEGCSSDCSSCCWL*AAGCWLLVGAILTG Trigger: TCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | GCTAGAGCCCCAAGAGGGGTGCAGCAGCGACTGCTCCTCCTGCTGTaGGTTGTTGGCTGCTGGCTGCTGGTTGCTTGTTGGCGCTATCCT | + |
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Preference number: 2 (lower is better) Translates to: ARAPRGVQQRLLLLL*VVGCWLLVACWRYP Trigger: AGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | CTACCTCCCTTTGCTTCTCTTGTCCTCCTTGTCCTCCACTTCCCCTaGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LPPFASLVLLVLHFP*VILKWDTRGPGRCW Trigger: CCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAGGGGAAGTGGAGGACAAGGAGGACAAGAGAAGCAAAGGGAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAACTTCTCTTCTGTCCCTaGTGTAGGAGGCCCGATCTA | + |
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Preference number: 2 (lower is better) Translates to: VSTADSTAAVPFHIPTSELLFCP*CRRPDL Trigger: TAGATCGGGCCTCCTACATCAGGGACAGAAGAGAAG...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGTTGAGCATATACACACCATCACACCCCTCAAGGGTCTTTCTTCCCCTCTTCTCTTCTGTCCCTaGTGTAGGAGGCCCGATCTA | + |
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Preference number: 2 (lower is better) Translates to: SWVEHIHTITPLKGLSSPLLFCP*CRRPDL Trigger: TAGATCGGGCCTCCTACATCAGGGACAGAAGAGAAG...AGGGGAAGAAAGACCCTTGAGGGGTGTGATGGTGTGTATATGCTCAACCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAATGAGCCGTATACTATAGCCATGATGTGTCTAACACCCTGTCCCTTGGCAGACCTCAATCCCTGGTaGGTGGAGGAGGGAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ENEPYTIAMMCLTPCPLADLNPW*VEEGSQ Trigger: CTGACTTCCCTCCTCCACTCACCAGGGATTGAGGTC...TGCCAAGGGACAGGGTGTTAGACACATCATGGCTATAGTATACGGCTCATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR GCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTTCAGATGATCTTGTGTaGCAGCTGCTCCCTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: DSTAAVPFHIPTSECTRLSDDLV*QLLPHL Trigger: AAGATGAGGGAGCAGCTGGCACACAAGATCATCTGA...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGAATACTTCCCTCATGTGATTACACACTCATGCCTCAGTAGTCATGAGAATGGGCGCTGCTGGCTCTaGGCACCGCTGAGAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CEYFPHVITHSCLSSHENGRCWL*APLRSW Trigger: CCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCC...ATTCTCATGACTACTGAGGCATGAGTGTGTAATCACATGAGGGAAGTATTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAGTAGGTGATGCAGGATCAGAGAATACTGATGAGGCTGGGAACAAAGTAGAGAATGGAGATCTCTaGGGAGGAGGCAAGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: WGVGDAGSENTDEAGNKVENGDL*GGGKQT Trigger: GGTTTGCTTGCCTCCTCCTCAGAGATCTCCATTCTC...TACTTTGTTCCCAGCCTCATCAGTATTCTCTGATCCTGCATCACCTACTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTTCAATCCCTGGTGAGTaGAGGAGGGAAGTCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVSIPGE*RREVRQ Trigger: CTGCCTGACTTCCCTCCTCCACTCACCAGGGATTGA...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGATTCCACTTGTTCTACTaGATAGCTTATTTCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: QLTPQLLCHFTFPPANARFHLFY*IAYFTG Trigger: GCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAA...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAGTAGGTGATGCAGGATCAGAGAATACTGATGAGGCTGGGAACAAAGTATGGAACCAGGAGTTCTaGGGTTCTCTCAAAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: WGVGDAGSENTDEAGNKVWNQEF*GSLKVS Trigger: GGAGACTTTGAGAGAACCCCAGAACTCCTGGTTCCA...TACTTTGTTCCCAGCCTCATCAGTATTCTCTGATCCTGCATCACCTACTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGACTGGTGAATATAAAGTaGTTTCTCGGGGTAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: QLTPQLLCHFTFPPANARLVNIK*FLGVVK Trigger: TTTAACTACCCCGAGAAATCACTTTATATTCACCAG...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | TGTCTTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGATTGGATaGGAGAAGGATGGGAAAGCAAGAGGAACCCATAAAGCAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: CLSLLFSVVGLEGIG*EKDGKARGTHKAAK Trigger: TTTGGCTGCTTTATGGGTTCCTCTTGCTTTCCCATCCTTCTCCAATCCAATCCCTTCCAACCCCACGACACTAAATAGGAGAGAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | ATTCTTGCTTACACTTGGGCAGCAGAATCACCTGCCCTGGCCTTCTaGCTTGAGAATGAGCCGTATACTATAGCCATGATGTGTCTAACA | + |
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Preference number: 2 (lower is better) Translates to: ILAYTWAAESPALAF*LENEPYTIAMMCLT Trigger: TGTTAGACACATCATGGCTATAGTATACGGCTCATTCTCAAGCAAGAAGGCCAGGGCAGGTGATTCTGCTGCCCAAGTGTAAGCAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGATCTAACATGTCTTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGGCCACCTTGGGCTTTTaGAGGTCTGTTTTCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GSDLTCLSLLFSVVGLEGATLGF*RSVFSS Trigger: TGAAGAGAAAACAGACCTCCAAAAGCCCAAGGTGGC...CCCTTCCAACCCCACGACACTAAATAGGAGAGAAAGACATGTTAGATCACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CAA 90 bp | GAACAGAGCTGGAGCAAGGAACTAATTCCAAATGGAGAGGAATTTTaGTTGTCTCCCTTTCCTCAGGGGTCACAAGGAATAAGCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: EQSWSKELIPNGEEF*LSPFPQGSQGISQT Trigger: GGTTTGGCTTATTCCTTGTGACCCCTGAGGAAAGGGAGACAACAAAAATTCCTCTCCATTTGGAATTAGTTCCTTGCTCCAGCTCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGTTGAGCATATACACACCATCACACCCCTCAAGGGTCTTTCTTCCCCTCTGGTGAATATAAAGTaGTTTCTCGGGGTAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SWVEHIHTITPLKGLSSPLVNIK*FLGVVK Trigger: TTTAACTACCCCGAGAAATCACTTTATATTCACCAG...AGGGGAAGAAAGACCCTTGAGGGGTGTGATGGTGTGTATATGCTCAACCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR GCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTCTTGATGTATCACAGTaGCTAGGAGATAGGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVLDVSQ*LGDRES Trigger: GGATTCCCTATCTCCTAGGCACTGTGATACATCAAG...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAAGGGGTAGTTAAAATTTaGATTTCCCTAATGACTAAC | + |
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Preference number: 2 (lower is better) Translates to: VSTADSTAAVPFHIPTSEGVVKI*ISLMTN Trigger: GTTAGTCATTAGGGAAATGCAAATTTTAACTACCCC...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTGATCTAACATGTCTTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGAATACTTCCCTCATGTaGTTACACACTCATGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GSDLTCLSLLFSVVGLEGNTSLM*LHTHAS Trigger: TGAGGCATGAGTGTGTAATCACATGAGGGAAGTATT...CCCTTCCAACCCCACGACACTAAATAGGAGAGAAAGACATGTTAGATCACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAATGAGCCGTATACTATAGCCATGATGTGTCTAACACCCTGTCCCTTGGCAATAAGGACATTTAATTaGGGCTGGCTTACAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: ENEPYTIAMMCLTPCPLAIRTFN*GWLTDS Trigger: TGAATCTGTAAGCCAGCCCCAATTAAATGTCCTTAT...TGCCAAGGGACAGGGTGTTAGACACATCATGGCTATAGTATACGGCTCATTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGAATACTTCCCTCATGTGATTACACACTCATGCCTCAGTAGTCATGAGAATAGATGTGGAATGAGCTaGAGATTGGAGGAAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CEYFPHVITHSCLSSHENRCGMS*RLEEES Trigger: GCTTTCTTCCTCCAATCTCCAGCTCATTCCACATCT...ATTCTCATGACTACTGAGGCATGAGTGTGTAATCACATGAGGGAAGTATTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATACTTCCCTCATGTGATTACACACTCATGCCTCAGTAGTCATGAGAATGGGGTAGTTAAAATTTaGATTTCCCTAATGACTAAC | + |
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Preference number: 2 (lower is better) Translates to: CEYFPHVITHSCLSSHENGVVKI*ISLMTN Trigger: GTTAGTCATTAGGGAAATGCAAATTTTAACTACCCC...ATTCTCATGACTACTGAGGCATGAGTGTGTAATCACATGAGGGAAGTATTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 72 bp | GAGCCCCAAGAGGGGTGCAGCAGCGACTGCTCCTCCTaGTGTTGGTTGTTGGCTGCTGGCTGCTGGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: EPQEGCSSDCSS*CWLLAAGCWLL Trigger: AAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CCA 72 bp | CCAGGGCGCTGCTGGCTCTGGGCACCGCTGAGAAGCTaGATTTTGAGTGTTCCTCTCTTGGGAGCTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PGRCWLWAPLRS*ILSVPLLGAQP Trigger: GGGCTGAGCTCCCAAGAGAGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR GCA 72 bp | CAAATGCTAGAGCCCCAAGAGGGGTGCAGCAGCGACTaGTCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QMLEPQEGCSSD*SSCCWLLAAGC Trigger: GCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTCTAGCATTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| 3UTR CCA 72 bp | GGTGCAGCAGCGACTGCTCCTCCTGCTGTTGGTTGTTaGCTGCTGGCTGCTGGTTGCTTGTTGGCGCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: GAAATAPPAVGC*LLAAGCLLALS Trigger: GGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | CAAGAGGGGTGCAGCAGCGACTGCTCCTCCTGCTGTTaGTTGTTGGCTGCTGGCTGCTGGTTGCTTGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QEGCSSDCSSCC*LLAAGCWLLVG Trigger: GCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | TTGTCCTCCTTGTCCTCCACTTCCCCTTGGTCATTCTaGAATGGGACACACGAGGACCAGGGCGCTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSLSSTSPWSF*NGTHEDQGAAG Trigger: GCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAGGGGAAGTGGAGGACAAGGAGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | GGGACAGGCACTGGCTGTCAGACACAGGGAGAGGTTTaGATAGGGAGAGGTCAACCCAGGGAACAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTGTGCQTQGEV*IGRGQPREQSW Trigger: CCAGCTCTGTTCCCTGGGTTGACCTCTCCCTATTCAAACCTCTCCCTGTGTCTGACAGCCAGTGCCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | TCTTGGGAGCTCAGCCCGTACACTGTGCCAGGGAAATaGTTCTGTAGAGTAATGCTTCCTGGGGTGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: SWELSPYTVPGK*FCRVMLPGVGP Trigger: CGGCCCCACCCCAGGAAGCATTACTCTACAGAAGCATTTCCCTGGCACAGTGTACGGGCTGAGCTCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | GTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTaGTGGCTCTGGGCACCGCTGAGAAGCTGGATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VILKWDTRGPGR*WLWAPLRSWIL Trigger: CAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | AAATGGGACACACGAGGACCAGGGCGCTGCTGGCTCTaGGCACCGCTGAGAAGCTGGATTTTGAGTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KWDTRGPGRCWL*APLRSWILSVP Trigger: AGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTGGCTCTGGGCCACAGGCCCTTCTATTaGACTGTGATCATGGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGHSEMGHTRTRALLALGHRPFY*TVIMGA Trigger: AGCTCCCATGATCACAGTCAAATAGAAGGGCCTGTG...GCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | CACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTaGCATTTCACATTCCCACCAGCGAATGCACGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HQPFPQLTPQLL*HFTFPPANARG Trigger: GCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | CAGCTGCAGATACAAATGCTAGAGCCCCAAGAGGGGTaGAGCAGCGACTGCTCCTCCTGCTGTTGGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLQIQMLEPQEG*SSDCSSCCWLL Trigger: CAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGGGGCTCTAGCATTTGTATCTGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | ATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTaGCTCTGGGCACCGCTGAGAAGCTGGATTTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILKWDTRGPGRC*LWAPLRSWILS Trigger: ACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | CAGACCAACAGGCAGGACACACCAGAAGGCAGTAGTTaGCACTCAGAGGAAGAACGCAGATGTCAGGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QTNRQDTPEGSS*HSEEERRCQED Trigger: GTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCCTGTTGGTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| 3UTR GCA 72 bp | GACTGCTCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTaGTGGTTGCTTGTTGGCGCTATCCTGACAGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: DCSSCCWLLAAG*WLLVGAILTGL Trigger: TAATCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | CTGTCAAAGCCTTGGGAGACACACAAGGTCCTAGTCTaGAGAGGGGAAGAGACGGAGCCTTCCAAGCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSKPWETHKVLV*RGEETEPSKLH Trigger: ATGGAGCTTGGAAGGCTCCGTCTCTTCCCCTCTCCAGACTAGGACCTTGTGTGTCTCCCAAGGCTTTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | AAGTCCCGGGATGAGCTGGCCGGCACCTCAATAACTTaGGAGAAGACCACACCTGATGCAAACTGCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSRDELAGTSIT*EKTTPDANCKR Trigger: CCTCTTGCAGTTTGCATCAGGTGTGGTCTTCTCTCAAGTTATTGAGGTGCCGGCCAGCTCATCCCGGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | TGCTCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTGCTaGTTGCTTGTTGGCGCTATCCTGACAGGATTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSSCCWLLAAGC*LLVGAILTGLN Trigger: GTTTAATCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | TACAGCTCTTCTCTGTGGAATCTATCTCCATGTCCTTaGCACAGGGAGCCAAGCAAGCGCCTGGCTAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YSSSLWNLSPCP*HREPSKRLARS Trigger: AGACCTAGCCAGGCGCTTGCTTGGCTCCCTGTGCCAAGGACATGGAGATAGATTCCACAGAGAAGAGCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | AGGAGGAGGCAAGCAAACCTAGAACTGTCAAAGCCTTaGGAGACACACAAGGTCCTAGTCTGGAGAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RRRQANLELSKP*ETHKVLVWRGE Trigger: TTCCCCTCTCCAGACTAGGACCTTGTGTGTCTCCCAAGGCTTTGACAGTTCTAGGTTTGCTTGCCTCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | CTGTTGGTTGTTGGCTGCTGGCTGCTGGTTGCTTGTTaGCGCTATCCTGACAGGATTAAACTTGCCCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLVVGCWLLVAC*RYPDRIKLALR Trigger: CCTTAGGGCAAGTTTAATCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | AGGAGTTGGGAGGAGTTTGGCTACAGCTCTTCTCTGTaGAATCTATCTCCATGTCCTTGGCACAGGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSWEEFGYSSSL*NLSPCPWHREP Trigger: TGGCTCCCTGTGCCAAGGACATGGAGATAGATTCCACAGAGAAGAGCTGTAGCCAAACTCCTCCCAACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | GAATTGGGAGGAGTTGGGAGGAGAGTTGGGAGGAGTTaGGAGGAGTTTGGCTACAGCTCTTCTCTGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ELGGVGRRVGRS*EEFGYSSSLWN Trigger: ATTCCACAGAGAAGAGCTGTAGCCAAACTCCTCCCAACTCCTCCCAACTCTCCTCCCAACTCCTCCCAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCATGTTTTCAGATGATCTaGTGTGCCAGCTGCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQPFPQLTPQLLCHFTFPCFQMI*CASCSL Trigger: GAGGGAGCAGCTGGCACACAAGATCATCTGAAAACA...TGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | GCAGACTATGATTTGCCTCATGCTTTGGCAGGGGAGTaGTTGTGCCAGCTGCAGATACAAATGCTAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ADYDLPHALAGE*LCQLQIQMLEP Trigger: GGGCTCTAGCATTTGTATCTGCAGCTGGCACAATCACTCCCCTGCCAAAGCATGAGGCAAATCATAGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | CCATTAAGCCAGAGCTTCAAGGAACCGTTCATATCCTaGGGGGAAGGTAAGGACTTGGGAGTGAGGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLSQSFKEPFIS*GEGKDLGVREN Trigger: ATTCTCCCTCACTCCCAAGTCCTTACCTTCCCCCCAGGATATGAACGGTTCCTTGAAGCTCTGGCTTAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | ACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATaGACGAGGCTTCCAATGTCTCTATATCCTTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TAAVPFHIPTSE*TRLPMSLYPCQ Trigger: TTGGCAAGGATATAGAGACATTGGAAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | GAGGAGGGAAGTCAGGCAGGTGAACTCTGTTCAGGATaGTTTCCACCAAACCCTTCATTAATACCAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EEGSQAGELCSG*FPPNPSLIPAL Trigger: GAGAGCTGGTATTAATGAAGGGTTTGGTGGAAACCATCCTGAACAGAGTTCACCTGCCTGACTTCCCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | TGTCCACAGCAGCAGACTATGATTTGCCTCATGCTTTaGCAGGGGAGTGATTGTGCCAGCTGCAGATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPQQQTMICLML*QGSDCASCRYK Trigger: TTTGTATCTGCAGCTGGCACAATCACTCCCCTGCCAAAGCATGAGGCAAATCATAGTCTGCTGCTGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | TTTAACTTCAGAGGAAACACCAACCGTTTCCACAGCTaGCTCCACAGCTGCTGTGCCATTTCACATTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FNFRGNTNRFHS*LHSCCAISHSH Trigger: GTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGTTTCCTCTGAAGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | CAAGAAAGGGTCTTTGCTGAACTTCTCTTCTGTCCCTaGTGTAGGAGGCCCGATCTAACACTGCTGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QERVFAELLFCP*CRRPDLTLLFS Trigger: TGAAAACAGCAGTGTTAGATCGGGCCTCCTACATCAGGGACAGAAGAGAAGTTCAGCAAAGACCCTTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | AGATTCAGAGGTTCTATTATCATCAAGGCAGGAATGTaGCAGCATCCAGGCAGGCATGGTACAGGAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RFRGSIIIKAGM*QHPGRHGTGGD Trigger: ATCTCCTCCTGTACCATGCCTGCCTGGATGCTGTCACATTCCTGCCTTGATGATAATAGAACCTCTGAATCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR GCA 72 bp | CCCGATCTAACACTGCTGTTTTCAGATGATCTTGTGTaGCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PDLTLLFSDDLV*QLLPHLSVLSV Trigger: AACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATCATCTGAAAACAGCAGTGTTAGATCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | CTCCAACAGGTCATACTTTCTAATAGTGCCACATCCTaGGTTGAGCATATACACACCATCACACCCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQQVILSNSATS*VEHIHTITPLK Trigger: CTTGAGGGGTGTGATGGTGTGTATATGCTCAACCCAGGATGTGGCACTATTAGAAAGTATGACCTGTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | CGGCTATGTTCCCTCCCTGTGAATACTTCCCTCATGTaGTTACACACTCATGCCTCAGTAGTCATGAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: RLCSLPVNTSLM*LHTHASVVMRI Trigger: AATTCTCATGACTACTGAGGCATGAGTGTGTAATCACATGAGGGAAGTATTCACAGGGAGGGAACATAGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGATTGGATTGGAGAAGGATGAATGGAGAGGAATTTTaGTTGTCTCCCTTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLSYLVSWGWKGLDWRRMNGEEF*LSPFPQ Trigger: CTGAGGAAAGGGAGACAACAAAAATTCCTCTCCATT...CATCCTTCTCCAATCCAATCCCTTCCAACCCCACGACACTAAATAGGAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | CATTGGACTAGTATTTGTGTTCTCTCAGGGCATGAGTaGGAACCTTTTCCCTTTGACTTAGGGTTTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HWTSICVLSGHE*EPFPFDLGFYC Trigger: GCAGTAAAACCCTAAGTCAAAGGGAAAAGGTTCTCACTCATGCCCTGAGAGAACACAAATACTAGTCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | AAAAGGTGTTTGAACACCTGTTGTTTTCATTTCTCTTaGCCGTACGCTTTGAAGTGGAATTGCAGGGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: KRCLNTCCFHFS*PYALKWNCRVI Trigger: TATTACCCTGCAATTCCACTTCAAAGCGTACGGTCAAGAGAAATGAAAACAACAGGTGTTCAAACACCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | CTATTTTTGTTCTTAAGCTTGCCCTTCAATGAAGGCTaGATAAGTACTGAATTGTCCAAAAAGGGAGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LFLFLSLPFNEG*ISTELSKKGES Trigger: CGACTCTCCCTTTTTGGACAATTCAGTACTTATTCAGCCTTCATTGAAGGGCAAGCTTAAGAACAAAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CCA 72 bp | GAGGTCTTTCCAAAATCTGTATTTGTTAAGACAGGCTaGGAAAGTGGAATAGTTAATAATCGGCATGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EVFPKSVFVKTG*ESGIVNNRHET Trigger: TGTCTCATGCCGATTATTAACTATTCCACTTTCCCAGCCTGTCTTAACAAATACAGATTTTGGAAAGACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR TCA 72 bp | TTGTTGATGAAACGAGTAACCCTGAGTATACATTCCTaGGAGATTAAGTTCCAGGGAAACATTTCTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLMKRVTLSIHS*EIKFQGNISLL Trigger: CAAAAGAGAAATGTTTCCCTGGAACTTAATCTCTCAGGAATGTATACTCAGGGTTACTCGTTTCATCAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | CCAAGAGGGGTGCAGCAGCGACTGCTCCTCCTGCTGTaGGTTGTTGGCTGCTGGCTGCTGGTTGCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGVQQRLLLLL*VVGCWLLVACW Trigger: CCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGAGCAGTCGCTGCTGCACCCCTCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | CGCTGCTGGCTCTGGGCACCGCTGAGAAGCTGGATTTaGAGTGTTCCTCTCTTGGGAGCTCAGCCCGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RCWLWAPLRSWI*SVPLLGAQPVH Trigger: GTGTACGGGCTGAGCTCCCAAGAGAGGAACACTCAAAATCCAGCTTCTCAGCGGTGCCCAGAGCCAGCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTATTGCGTTCCAGGCCTaGGAACGGGGGCACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLIAFQA*ERGHLP Trigger: TGGGAGGTGCCCCCGTTCTCAGGCCTGGAACGCAAT...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTTCCTCCTCGCTGAACTaGGAAGGGATCCGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLSSSLN*EGIRDA Trigger: GGCGTCCCGGATCCCTTCCCAGTTCAGCGAGGAGGA...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCTCCTCCTCGCTGAACTaGGAAGGGATCCGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRTHQKAVVATQRKNADVSSSLN*EGIRDA Trigger: GGCGTCCCGGATCCCTTCCCAGTTCAGCGAGGAGGA...GACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGCAGCTGGTAGCCCATaGCCTGGTCATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARAAGSP*PGHQRG Trigger: GCCCCTCTGATGACCAGGCCATGGGCTACCAGCTGC...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTATTGCGTTCCAGGCCTaGGAACGGGGGCACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQDTPEGSSCHSEEERRCIAFQA*ERGHLP Trigger: TGGGAGGTGCCCCCGTTCTCAGGCCTGGAACGCAAT...ACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAGCAGGACACCACTGAAGTCCTaGGGGTTCAGGGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSSCHSEEERRCQEDSRTPLKS*GFRGRG Trigger: CCCCCTTCCCCTGAACCCTCAGGACTTCAGTGGTGT...CCTGCTGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCGCAGCTGGTAGCCCATaGCCTGGTCATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPAAGSP*PGHQRG Trigger: GCCCCTCTGATGACCAGGCCATGGGCTACCAGCTGC...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAAGGTCATCAGAGGGGCTaGTGGGCAGGGGTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTADSTAAVPFHIPTSEGHQRG*WAGVQR Trigger: CCTTTGAACCCCTGCCCATCAGCCCCTCTGATGACC...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCAAGGGGCAGCTCCCGAGTCGGAGAGAAGACAGGAGAAAGGGCATTCTGGTACATGCCATTGGTaGTGTTGGCATAGTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQGAAPESERRQEKGHSGTCHW*CWHSVG Trigger: CCCGACACTATGCCAACATCACCAATGGCATGTACC...AGAATGCCCTTTCTCCTGTCTTCTCTCCGACTCGGGAGCTGCCCCTTGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCAACACCACTGAAGTCCTaGGGGTTCAGGGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQPFPQLTPQLLCHFTFPTPLKS*GFRGRG Trigger: CCCCCTTCCCCTGAACCCTCAGGACTTCAGTGGTGT...TGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAACACCACTGAAGTCCTaGGGGTTCAGGGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQKAVVATQRKNADVRRTTPLKS*GFRGRG Trigger: CCCCCTTCCCCTGAACCCTCAGGACTTCAGTGGTGT...TGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCGGTCATCAGAGGGGCTaGTGGGCAGGGGTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRGHQRG*WAGVQR Trigger: CCTTTGAACCCCTGCCCATCAGCCCCTCTGATGACC...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTGACACTGTGGGAATCTaGATGGCACCTTTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLDTVGI*MAPFSA Trigger: GGCGCTGAAAGGTGCCATCCAGATTCCCACAGTGTC...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | GCACCGCTGAGAAGCTGGATTTTGAGTGTTCCTCTCTaGGGAGCTCAGCCCGTACACTGTGCCAGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: APLRSWILSVPL*GAQPVHCAREM Trigger: CATTTCCCTGGCACAGTGTACGGGCTGAGCTCCCAAGAGAGGAACACTCAAAATCCAGCTTCTCAGCGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CCAACAGGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGGGCACCCTTCTCAGTaGCTGAAATCATGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTGRTHQKAVVATQRKNAGHPSQ*LKSWQL Trigger: CAGTTGCCATGATTTCAGTCACTGAGAAGGGTGCCC...TGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCCTCCTTTGGGGGAGCTaGAGAGTGGCCTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRLLWGS*RVAWSH Trigger: ATGACTCCAGGCCACTCTTCAGCTCCCCCAAAGGAG...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGTTGAGCATATACACACCATCACACCCCTCAAGGGTCTTTCTTCCCCTCTCCTTTGGGGGAGCTaGAGAGTGGCCTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWVEHIHTITPLKGLSSPLLWGS*RVAWSH Trigger: ATGACTCCAGGCCACTCTTCAGCTCCCCCAAAGGAG...AGGGGAAGAAAGACCCTTGAGGGGTGTGATGGTGTGTATATGCTCAACCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCGGTACATGCCATTGGTaGTGTTGGCATAGTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRTHQKAVVATQRKNADVGTCHW*CWHSVG Trigger: CCCGACACTATGCCAACATCACCAATGGCATGTACC...GACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| CDS-3UTR CCA 90 bp | ACGCAGATGTCAGGAGGACAGCAGGGCAGATTCTGTTCATCTCCCTTTCCTCCTGACACTGTGGGAATCTaGATGGCACCTTTCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQMSGGQQGRFCSSPFPPDTVGI*MAPFSA Trigger: GGCGCTGAAAGGTGCCATCCAGATTCCCACAGTGTC...AGGAGGAAAGGGAGATGAACAGAATCTGCCCTGCTGTCCTCCTGACATCTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CGCAGATGTCAGGAGGACAGCAGGGCAGATTCTGTTCATCTCCCTTTCCTCCTGTGGACAAGGCTGCTGTaGAACACTGTAGGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCQEDSRADSVHLPFLLWTRLL*NTVGKA Trigger: AGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCA...CAGGAGGAAAGGGAGATGAACAGAATCTGCCCTGCTGTCCTCCTGACATCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACTGGGGTCTGAGCCTTaGATGGTGAACAGGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HQPFPQLTPQLLCHFTFPLGSEP*MVNRWL Trigger: TAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAG...TGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTCTCAACACATGCAGCTaGACTCTGTCATCAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLLNTCS*TLSSAT Trigger: CGTGGCTGATGACAGAGTCCAGCTGCATGTGTTGAG...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | CCTGGCAGCTACTGGGCACATTCAAATAGCCTAGGGTaGACGTCCAGAGCGAAGACAGGAGCTCTGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSYWAHSNSLG*TSRAKTGALLY Trigger: GTATAGCAGAGCTCCTGTCTTCGCTCTGGACGTCAACCCTAGGCTATTTGAATGTGCCCAGTAGCTGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | GGAATTGGGAGGAGTTGGGAGGAGAGTTGGGAGGAGTaGGGAGGAGTTTGGCTACAGCTCTTCTCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GIGRSWEESWEE*GGVWLQLFSVE Trigger: TTCCACAGAGAAGAGCTGTAGCCAAACTCCTCCCAACTCCTCCCAACTCTCCTCCCAACTCCTCCCAATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGATGGATTCCTCGTGGCTaGAAGACACTGTGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARWIPRG*KTLWES Trigger: AGATTCCCACAGTGTCTTTCAGCCACGAGGAATCCA...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTCTGAGCCTTGGATGGTaGACAGGTGGCTATACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLLSLGW*TGGYTL Trigger: CAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAG...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGACAGCCACGGTGTTCTTaGCAAGTTCTAGGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARQPRCS*QVLGPH Trigger: ATGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTG...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCGCCACGACTTCATGTTaGACAAGGCTGCTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPATTSC*TRLLWN Trigger: GTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGC...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTGGCTCTGGGCTTATCCTGCTCACAATaGGATGAAATAGCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGHSEMGHTRTRALLALGLSCSQ*DEIATG Trigger: ACCTGTGGCTATTTCATCCCATTGTGAGCAGGATAA...GCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | TCCTCCTGCTGTTGGTTGTTGGCTGCTGGCTGCTGGTaGCTTGTTGGCGCTATCCTGACAGGATTAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCCWLLAAGCW*LVGAILTGLNL Trigger: CAAGTTTAATCCTGTCAGGATAGCGCCAACAAGCAACCAGCAGCCAGCAGCCAACAACCAACAGCAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCTGGATTCCTCGTGGCTaGAAGACACTGTGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPWIPRG*KTLWES Trigger: AGATTCCCACAGTGTCTTTCAGCCACGAGGAATCCA...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACACTGAGCCTTGGATGGTaGACAGGTGGCTATACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKAVVATQRKNADVRRTLSLGW*TGGYTL Trigger: CAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAG...TGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCACTGCAAACTGGGGTCTaGGCCTTGGATGGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCASCSLILAFFQFSVALQTGV*ALDGEQ Trigger: CTGTTCACCATCCAAGGCTCAGACCCCAGTTTGCAG...TGCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCTGGGGCTGTAGTTTCTaGTCAACAGGAGCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPWGCSF*STGAPK Trigger: CTTTGGAGCTCCTGTTGATCAGAAACTACAGCCCCA...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTCATGGCCCAAAGCAATaGAGAAAGATCTTTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLHGPKQ*RKIFWG Trigger: GCCCCAAAAGATCTTTCTTCATTGCTTTGGGCCATG...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTACCCTTCTCAGTGACTaGAATCATGGCAACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLTLLSD*NHGNWL Trigger: AAGCCAGTTGCCATGATTTCAGTCACTGAGAAGGGT...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCGGGCACCCTTCTCAGTaGCTGAAATCATGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRGHPSQ*LKSWQL Trigger: CAGTTGCCATGATTTCAGTCACTGAGAAGGGTGCCC...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCATGTTTACTTGCAGCATaGGGTCAAGGGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQPFPQLTPQLLCHFTFPCLLAA*GQGHPS Trigger: AGAAGGGTGCCCTTGACCTCATGCTGCAAGTAAACA...TGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGACTGCTCACAATGGGATaGAATAGCCACAGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARLLTMG*NSHRFL Trigger: GAGAAACCTGTGGCTATTTCATCCCATTGTGAGCAG...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTCAGGTGGCTATACTTTaGCACGACTTCATGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLQVAIL*HDFMLD Trigger: GTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTG...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCGTGTTGGATTCCTCGTaGCTGAAAGACACTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPVLDSS*LKDTVG Trigger: TCCCACAGTGTCTTTCAGCCACGAGGAATCCAACAC...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAGCAAACATATTCGGCATTaGTGTCTGCTCCAGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEGSSCHSEEERRCQEDSKHIRH*CLLQSA Trigger: AGCCGACTGGAGCAGACACCAATGCCGAATATGTTT...GCTGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGACCAGCGCATTTGTTATaGGGTTCCTCTCCATTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARPAHLL*GSSPLS Trigger: GGATAATGGAGAGGAACCCCATAACAAATGCGCTGG...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTTGTAGCCTGAGCCAATaGAGGGATGACATTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSTAAVPFHIPTSECTRLCSLSQ*RDDIHL Trigger: AAGGTGAATGTCATCCCTCCATTGGCTCAGGCTACA...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCCTCAACACATGCAGCTaGACTCTGTCATCAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRLNTCS*TLSSAT Trigger: CGTGGCTGATGACAGAGTCCAGCTGCATGTGTTGAG...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCGGAGTCATGTTTACTTaGAGCATGAGGTCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPGVMFT*SMRSRA Trigger: TGCCCTTGACCTCATGCTGCAAGTAAACATGACTCC...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTGGAGTCATGTTTACTTaGAGCATGAGGTCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQDTPEGSSCHSEEERRCGVMFT*SMRSRA Trigger: TGCCCTTGACCTCATGCTGCAAGTAAACATGACTCC...ACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAAAGGATCTCAACACATaGAGCTGGACTCTGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARKDLNT*SWTLSS Trigger: TGATGACAGAGTCCAGCTGCATGTGTTGAGATCCTT...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGGTTTGAGCTGGAGGAATGCCTCAGATTTTGTATCCATCCTGTGCAGAGTCTGGGGTCTGAGCCTTaGATGGTGAACAGGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VGFELEECLRFCIHPVQSLGSEP*MVNRWL Trigger: TAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAG...ACTCTGCACAGGATGGATACAAAATCTGAGGCATTCCTCCAGCTCAAACCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAAAAACATATTCGGCATTaGTGTCTGCTCCAGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTADSTAAVPFHIPTSEKHIRH*CLLQSA Trigger: AGCCGACTGGAGCAGACACCAATGCCGAATATGTTT...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGTAGCCTGAGCCAATaGAGGGATGACATTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTADSTAAVPFHIPTSECSLSQ*RDDIHL Trigger: AAGGTGAATGTCATCCCTCCATTGGCTCAGGCTACA...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | AGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTHQKAVVATQRKNADVRGRQIV*SLEAAG Trigger: ACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCC...CCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAGCAGGGCAGATATGCAGATGAGGAACTaGCTCTTTGTAAGTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCHSEEERRCQEDSRADMQMRN*LFVSVG Trigger: GCCGACACTTACAAAGAGCCAGTTCCTCATCTGCAT...ATCTGCCCTGCTGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCCATGGCCCAAAGCAATaGAGAAAGATCTTTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRHGPKQ*RKIFWG Trigger: GCCCCAAAAGATCTTTCTTCATTGCTTTGGGCCATG...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCACAGCCACGGTGTTCTTaGCAAGTTCTAGGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILCASCSLILAFFQFSVAQPRCS*QVLGPH Trigger: ATGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTG...TGCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTTGTAGGGCTGCAAACTaGGGTCTGAGCCTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVCRAAN*GLSLGW Trigger: CCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACA...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGGAATAGTTAATAATCGGCATGAGACAGACCAACAGGCAGGACACACCTGTAGGGCTGCAAACTaGGGTCTGAGCCTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESGIVNNRHETDQQAGHTCRAAN*GLSLGW Trigger: CCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACA...GGTGTGTCCTGCCTGTTGGTCTGTCTCATGCCGATTATTAACTATTCCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCGACACCTCCTCATCATaGCCCAAAGCAATGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPTVSTADSTAAVPFHIPDTSSS*PKAMKK Trigger: TTTCTTCATTGCTTTGGGCCATGATGAGGAGGTGTC...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRGRQIV*SLEAAG Trigger: ACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCC...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCATGCAGATGAGGAACTaGCTCTTTGTAAGTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRMQMRN*LFVSVG Trigger: GCCGACACTTACAAAGAGCCAGTTCCTCATCTGCAT...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTTTGAGCTGGAGGAATGCCTCAGATTTTGTATCCATCCTGTGCAGAGTTGTTTACTTGCAGCATaGGGTCAAGGGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGFELEECLRFCIHPVQSCLLAA*GQGHPS Trigger: AGAAGGGTGCCCTTGACCTCATGCTGCAAGTAAACA...ACTCTGCACAGGATGGATACAAAATCTGAGGCATTCCTCCAGCTCAAACCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTGGTACATGCCATTGGTaGTGTTGGCATAGTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVGTCHW*CWHSVG Trigger: CCCGACACTATGCCAACATCACCAATGGCATGTACC...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGATCCTCTCCATTATCCTaGTCACAATGGGATGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QLTPQLLCHFTFPPANARSSPLS*SQWDEI Trigger: TATTTCATCCCATTGTGAGCAGGATAATGGAGAGGA...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAGCTCCTCTCCATTATCCTaGTCACAATGGGATGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PEGSSCHSEEERRCQEDSSSPLS*SQWDEI Trigger: TATTTCATCCCATTGTGAGCAGGATAATGGAGAGGA...GCTGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTTGGACAAGGCTGCTGTaGAACACTGTAGGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVWTRLL*NTVGKA Trigger: AGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCA...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GAGAATGAGCCGTATACTATAGCCATGATGTGTCTAACACCCTGTCCCTTGGCACCAGCGCATTTGTTATaGGGTTCCTCTCCATTATCC | + |
|
Preference number: 4 (lower is better) Translates to: ENEPYTIAMMCLTPCPLAPAHLL*GSSPLS Trigger: GGATAATGGAGAGGAACCCCATAACAAATGCGCTGG...TGCCAAGGGACAGGGTGTTAGACACATCATGGCTATAGTATACGGCTCATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGTGGAATAGTTAATAATCGGCATGAGACAGACCAACAGGCAGGACACACCCTGCTCACAATGGGATaGAATAGCCACAGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGIVNNRHETDQQAGHTLLTMG*NSHRFL Trigger: GAGAAACCTGTGGCTATTTCATCCCATTGTGAGCAG...GGTGTGTCCTGCCTGTTGGTCTGTCTCATGCCGATTATTAACTATTCCACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGATTGGATTGGAGAAGGATGCAGGTGGCTATACTTTaGCACGACTTCATGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSYLVSWGWKGLDWRRMQVAIL*HDFMLD Trigger: GTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTG...CATCCTTCTCCAATCCAATCCCTTCCAACCCCACGACACTAAATAGGAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTCAGAAAGAATGCCAATaGTTGTCTCCTTTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVQKECQ*LSPLGE Trigger: CTCCCCCAAAGGAGACAAGCATTGGCATTCTTTCTG...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTCAGCGGCAGAAAGAATaGCAATGCTTGTCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVQRQKE*QCLSPL Trigger: CAAAGGAGACAAGCATTGGCATTCTTTCTGCCGCTG...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGGAATAGTTAATAATCGGCATGAGACAGACCAACAGGCAGGACACACCCAGCGGCAGAAAGAATaGCAATGCTTGTCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESGIVNNRHETDQQAGHTQRQKE*QCLSPL Trigger: CAAAGGAGACAAGCATTGGCATTCTTTCTGCCGCTG...GGTGTGTCCTGCCTGTTGGTCTGTCTCATGCCGATTATTAACTATTCCACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCACATTTGCATAATGTTTTCCATTGCACCGCCTCTGGTTTCCACTTGTTCGCCACGACTTCATGTTaGACAAGGCTGCTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLHNVFHCTASGFHLFATTSC*TRLLWN Trigger: GTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGC...GAACAAGTGGAAACCAGAGGCGGTGCAATGGAAAACATTATGCAAATGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGGTTTGAGCTGGAGGAATGCCTCAGATTTTGTATCCATCCTGTGCAGAGTGACACCTCCTCATCATaGCCCAAAGCAATGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGFELEECLRFCIHPVQSDTSSS*PKAMKK Trigger: TTTCTTCATTGCTTTGGGCCATGATGAGGAGGTGTC...ACTCTGCACAGGATGGATACAAAATCTGAGGCATTCCTCCAGCTCAAACCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGTGTGCCAGCTGCTCCCTCATCTTAGCGTTCTTTCAGTTCTCTGTCGCCATTGTCTTCTTCAATaGCCCTCCTCCAAACATATT | + |
|
Preference number: 4 (lower is better) Translates to: DLVCQLLPHLSVLSVLCRHCLLQ*PSSKHI Trigger: AATATGTTTGGAGGAGGGCCATTGAAGAAGACAATG...GCGACAGAGAACTGAAAGAACGCTAAGATGAGGGAGCAGCTGGCACACAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCCTATTTAGTGTCGTGGGGTTGGAAGGGATTGGATTGGAGAAGGATGATGCAGATGAGGAACTaGCTCTTTGTAAGTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSYLVSWGWKGLDWRRMMQMRN*LFVSVG Trigger: GCCGACACTTACAAAGAGCCAGTTCCTCATCTGCAT...CATCCTTCTCCAATCCAATCCCTTCCAACCCCACGACACTAAATAGGAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | AACAGGTCATACTTTCTAATAGTGCCACATCCTGGGTaGAGCATATACACACCATCACACCCCTCAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRSYFLIVPHPG*SIYTPSHPSRV Trigger: GACCCTTGAGGGGTGTGATGGTGTGTATATGCTCAACCCAGGATGTGGCACTATTAGAAAGTATGACCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCACATTTGCATAATGTTTTCCATTGCACCGCCTCTGGTTTCCACTTGTTCTGGGGCTGTAGTTTCTaGTCAACAGGAGCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLHNVFHCTASGFHLFWGCSF*STGAPK Trigger: CTTTGGAGCTCCTGTTGATCAGAAACTACAGCCCCA...GAACAAGTGGAAACCAGAGGCGGTGCAATGGAAAACATTATGCAAATGTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | TCATGGGAGCTTCTAAGTTTGAGTCTTAACTCCAGATGTGGAATGAGCTGGAGAGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWELLSLSLNSRCGMSWRGRQIV*SLEAAG Trigger: ACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCC...TCTCCAGCTCATTCCACATCTGGAGTTAAGACTCAAACTTAGAAGCTCCCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCACATTTGCATAATGTTTTCCATTGCACCGCCTCTGGTTTCCACTTGTTCACCCTTCTCAGTGACTaGAATCATGGCAACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLHNVFHCTASGFHLFTLLSD*NHGNWL Trigger: AAGCCAGTTGCCATGATTTCAGTCACTGAGAAGGGT...GAACAAGTGGAAACCAGAGGCGGTGCAATGGAAAACATTATGCAAATGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | GAGAATGAGCCGTATACTATAGCCATGATGTGTCTAACACCCTGTCCCTTGGCACATTGTCTTCTTCAATaGCCCTCCTCCAAACATATT | + |
|
Preference number: 4 (lower is better) Translates to: ENEPYTIAMMCLTPCPLAHCLLQ*PSSKHI Trigger: AATATGTTTGGAGGAGGGCCATTGAAGAAGACAATG...TGCCAAGGGACAGGGTGTTAGACACATCATGGCTATAGTATACGGCTCATTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | TTTTCTGTTTCCAAGAACACAATACCACAAACCGGGTaGAGCATGGTTTATTTTGGCTCACAGCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVSKNTIPQTG*SMVYFGSQLWS Trigger: GCTCCAGAGCTGTGAGCCAAAATAAACCATGCTCAACCCGGTTTGTGGTATTGTGTTCTTGGAAACAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCACATTTGCATAATGTTTTCCATTGCACCGCCTCTGGTTTCCACTTGTTCAAGGATCTCAACACATaGAGCTGGACTCTGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLHNVFHCTASGFHLFKDLNT*SWTLSS Trigger: TGATGACAGAGTCCAGCTGCATGTGTTGAGATCCTT...GAACAAGTGGAAACCAGAGGCGGTGCAATGGAAAACATTATGCAAATGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | TCTCCACCTCAAGTTTCATTACACAGGCCCTTCTATTaGACTGTGATCATGGGAGCTTCTAAGTTTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQVSLHRPFY*TVIMGASKFES Trigger: AGACTCAAACTTAGAAGCTCCCATGATCACAGTCAAATAGAAGGGCCTGTGTAATGAAACTTGAGGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | AGCAAGGAACTAATTCCAAATGGAGAGGAATTTTTGTaGTCTCCCTTTCCTCAGGGGTCACAAGGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKELIPNGEEFL*SPFPQGSQGIS Trigger: GCTTATTCCTTGTGACCCCTGAGGAAAGGGAGACAACAAAAATTCCTCTCCATTTGGAATTAGTTCCTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | TGGAGCAAGGAACTAATTCCAAATGGAGAGGAATTTTaGTTGTCTCCCTTTCCTCAGGGGTCACAAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: WSKELIPNGEEF*LSPFPQGSQGI Trigger: TATTCCTTGTGACCCCTGAGGAAAGGGAGACAACAAAAATTCCTCTCCATTTGGAATTAGTTCCTTGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | ATCTCTGGCTGTAAGGCACAGAAACAAAAAGGCTTTTaGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISGCKAQKQKGF*LAIENKELLSG Trigger: GCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTCTGTGCCTTACAGCCAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCACATTTGCATAATGTTTTCCATTGCACCGCCTCTGGTTTCCACTTGTTCTTATCCTGCTCACAATaGGATGAAATAGCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLHNVFHCTASGFHLFLSCSQ*DEIATG Trigger: ACCTGTGGCTATTTCATCCCATTGTGAGCAGGATAA...GAACAAGTGGAAACCAGAGGCGGTGCAATGGAAAACATTATGCAAATGTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| 3UTR CAA 72 bp | TATACTATAGCCATGATGTGTCTAACACCCTGTCCCTaGGCATTTGATACCCTTGTTGATGAAACGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YTIAMMCLTPCP*AFDTLVDETSN Trigger: GTTACTCGTTTCATCAACAAGGGTATCAAATGCCAAGGGACAGGGTGTTAGACACATCATGGCTATAGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS TCA 90 bp | TCTCTTGAAGCAGCTGGTAGCCCATGGCCTGGTCATCAGAGGGGCTaGTGGGCAGGGGTTCAAAGGATCTCAACACATGCAGCTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SLEAAGSPWPGHQRG*WAGVQRISTHAAGL Trigger: GAGTCCAGCTGCATGTGTTGAGATCCTTTGAACCCCTGCCCATCAGCCCCTCTGATGACCAGGCCATGGGCTACCAGCTGCTTCAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCGCCATCACAGAGTTTTaGTTGTCCAGCGCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTHQKAVVATQRKNADVAITEF*LSSAPR Trigger: CCGGGGTGCGCTGGACAACAAAAACTCTGTGATGGC...GACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGTCATTCTGAAATGGGACACACGAGGACCAGGGCGCTGCTGGCTCTGGGCACCTTGATTCCTGCATaGAACATGGTGAGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGHSEMGHTRTRALLALGTLIPA*NMVRAV Trigger: CACAGCCCTCACCATGTTCAATGCAGGAATCAAGGT...GCCCAGAGCCAGCAGCGCCCTGGTCCTCGTGTGTCCCATTTCAGAATGACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
||
| CDS CCA 90 bp | AAATACCGGGGACGACGATGTCGACTTCCGGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGTAGCCCATGGCCTGGTCATCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYRGRRCRLPGRQIV*SLEAAGSPWPGHQR Trigger: CCTCTGATGACCAGGCCATGGGCTACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCCCGGAAGTCGACATCGTCGTCCCCGGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAATCACAGAGTTTTTGTaGTCCAGCGCACCCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLTPQLLCHFTFPPANARITEFL*SSAPRP Trigger: TGGCCGGGGTGCGCTGGACAACAAAAACTCTGTGAT...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAAGCCATCACAGAGTTTTaGTTGTCCAGCGCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSTADSTAAVPFHIPTSEAITEF*LSSAPR Trigger: CCGGGGTGCGCTGGACAACAAAAACTCTGTGATGGC...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS CCA 90 bp | GCTGTGGTGTTGGATTCCTCGTGGCTGAAAGACACTGTGGGAATCTaGATGGCACCTTTCAGCGCCTCTTTTATAGCGACACGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVVLDSSWLKDTVGI*MAPFSASFIATRSS Trigger: GGAGGAGCGTGTCGCTATAAAAGAGGCGCTGAAAGGTGCCATCCAGATTCCCACAGTGTCTTTCAGCCACGAGGAATCCAACACCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS CCA 90 bp | GAGGGGCTGATGGGCAGGGGTTCAAAGGATCTCAACACATGCAGCTaGACTCTGTCATCAGCCACGGTGTTCTTGACAAGTTCTAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: EGLMGRGSKDLNTCS*TLSSATVFLTSSRT Trigger: GGTCCTAGAACTTGTCAAGAACACCGTGGCTGATGACAGAGTCCAGCTGCATGTGTTGAGATCCTTTGAACCCCTGCCCATCAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGATGCCACGACTTCATGTaGGACAAGGCTGCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLTPQLLCHFTFPPANARCHDFM*DKAAVE Trigger: TTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCA...TCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCTTCAGGGGAAGGGGGTaGAACCGGTACATGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TPTVSTADSTAAVPFHIPFRGRG*NRYMPL Trigger: CAATGGCATGTACCGGTTCAACCCCCTTCCCCTGAA...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGACACACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTTTCAGGGGAAGGGGGTaGAACCGGTACATGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RQDTPEGSSCHSEEERRCFRGRG*NRYMPL Trigger: CAATGGCATGTACCGGTTCAACCCCCTTCCCCTGAA...ACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTGTGTCCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
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| CDS-3UTR CAA 90 bp | AGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACAGCAGGGCAGATTTCAGGGGAAGGGGGTaGAACCGGTACATGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SSCHSEEERRCQEDSRADFRGRG*NRYMPL Trigger: CAATGGCATGTACCGGTTCAACCCCCTTCCCCTGAA...ATCTGCCCTGCTGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112393.9 ENSMUST00000152989.2 |
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| CDS TCA 90 bp | CCATCAGCATGTAGGGCTGCAAACTGGGGTCTGAGCCTTGGATGGTaGACAGGTGGCTATACTTTGCCACGACTTCATGTTGGACAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSACRAANWGLSLGW*TGGYTLPRLHVGQG Trigger: GCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACATGCTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 90 bp | GCAGAAAGAATGCCAATGCTTGTCTCCTTTGGGGGAGCTGAAGAGTaGCCTGGAGTCATGTTTACTTGCAGCATGAGGTCAAGGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: AERMPMLVSFGGAEE*PGVMFTCSMRSRAP Trigger: GGGTGCCCTTGACCTCATGCTGCAAGTAAACATGACTCCAGGCCACTCTTCAGCTCCCCCAAAGGAGACAAGCATTGGCATTCTTTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCTGCCACGACTTCATGTaGGACAAGGCTGCTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: TPTVSTADSTAAVPFHIPCHDFM*DKAAVE Trigger: TTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCA...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | GACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGCACGAGGCTTTCAGCCACGGTGTTCTaGACAAGTTCTAGGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: DSTAAVPFHIPTSECTRLSATVF*TSSRTS Trigger: TGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTGA...AAGCCTCGTGCATTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 90 bp | CACATCAATGTGAGCCATCAGCATGTAGGGCTGCAAACTGGGGTCTaGGCCTTGGATGGTGAACAGGTGGCTATACTTTGCCACGACTTC | + |
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Preference number: 5 (lower is better) Translates to: HINVSHQHVGLQTGV*ALDGEQVAILCHDF Trigger: GAAGTCGTGGCAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACATGCTGATGGCTCACATTGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 90 bp | GACAGCGGCAGAAAGAATGCCAATGCTTGTCTCCTTTGGGGGAGCTaGAGAGTGGCCTGGAGTCATGTTTACTTGCAGCATGAGGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: DSGRKNANACLLWGS*RVAWSHVYLQHEVK Trigger: CTTGACCTCATGCTGCAAGTAAACATGACTCCAGGCCACTCTTCAGCTCCCCCAAAGGAGACAAGCATTGGCATTCTTTCTGCCGCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS GCA 90 bp | GTCTTCTTCAATGGCCCTCCTCCAAACATATTCGGCATTGGTGTCTaGTCCAGTCGGCTGACAGCGGCAGAAAGAATGCCAATGCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: VFFNGPPPNIFGIGV*SSRLTAAERMPMLV Trigger: GACAAGCATTGGCATTCTTTCTGCCGCTGTCAGCCGACTGGAGCAGACACCAATGCCGAATATGTTTGGAGGAGGGCCATTGAAGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | GTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCACCAGCGAATGGAGTCATGTTTACTaGCAGCATGAGGTCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: VSTADSTAAVPFHIPTSEWSHVY*QHEVKG Trigger: GCCCTTGACCTCATGCTGCAAGTAAACATGACTCCA...TTCGCTGGTGGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | CACCAGAAGGCAGTAGTTGCCACTCAGAGGAAGAACGCAGATGTCAGGAGGACATGGAGTCATGTTTACTaGCAGCATGAGGTCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HQKAVVATQRKNADVRRTWSHVY*QHEVKG Trigger: GCCCTTGACCTCATGCTGCAAGTAAACATGACTCCA...TGTCCTCCTGACATCTGCGTTCTTCCTCTGAGTGGCAACTACTGCCTTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | ACACCAACCGTTTCCACAGCTGACTCCACAGCTGCTGTGCCATTTCACATTCCCTCAGCCACGGTGTTCTaGACAAGTTCTAGGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: TPTVSTADSTAAVPFHIPSATVF*TSSRTS Trigger: TGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTGA...GGGAATGTGAAATGGCACAGCAGCTGTGGAGTCAGCTGTGGAAACGGTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS GCA 90 bp | GATTGTAGCCTGAGCCAATGGAGGGATGACATTCACCTTGATTCCTaGATTGAACATGGTGAGGGCTGTGGTAGTTCGGACCAGCGCATT | + |
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Preference number: 5 (lower is better) Translates to: DCSLSQWRDDIHLDS*IEHGEGCGSSDQRI Trigger: AATGCGCTGGTCCGAACTACCACAGCCCTCACCATGTTCAATGCAGGAATCAAGGTGAATGTCATCCCTCCATTGGCTCAGGCTACAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 90 bp | CCTTGGATGGTGAACAGGTGGCTATACTTTGCCACGACTTCATGTTaGACAAGGCTGCTGTGGAACACTGTAGGGAAGGCTTTGCGGATA | + |
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Preference number: 5 (lower is better) Translates to: PWMVNRWLYFATTSC*TRLLWNTVGKALRI Trigger: TATCCGCAAAGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCACCATCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 90 bp | CTTCATTGTCTTCTTCAATGGCCCTCCTCCAAACATATTCGGCATTaGTGTCTGCTCCAGTCGGCTGACAGCGGCAGAAAGAATGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: LHCLLQWPSSKHIRH*CLLQSADSGRKNAN Trigger: ATTGGCATTCTTTCTGCCGCTGTCAGCCGACTGGAGCAGACACCAATGCCGAATATGTTTGGAGGAGGGCCATTGAAGAAGACAATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 90 bp | CATGTTTACTTGCAGCATGAGGTCAAGGGCACCCTTCTCAGTGACTaGAATCATGGCAACTGGCTTCTCGAGGTTTGGAATGAAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: HVYLQHEVKGTLLSD*NHGNWLLEVWNEAF Trigger: GAAGGCTTCATTCCAAACCTCGAGAAGCCAGTTGCCATGATTTCAGTCACTGAGAAGGGTGCCCTTGACCTCATGCTGCAAGTAAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 90 bp | ATCTCAACACATGCAGCTGGACTCTGTCATCAGCCACGGTGTTCTTaGCAAGTTCTAGGACCTCATGTACTGTCTGCGAAGGGTGAATTC | + |
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Preference number: 5 (lower is better) Translates to: ISTHAAGLCHQPRCS*QVLGPHVLSAKGEF Trigger: GAATTCACCCTTCGCAGACAGTACATGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTGATGACAGAGTCCAGCTGCATGTGTTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 90 bp | TGTCTGCGAAGGGTGAATTCGGCAGTTGATTGTAGCCTGAGCCAATaGAGGGATGACATTCACCTTGATTCCTGCATTGAACATGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CLRRVNSAVDCSLSQ*RDDIHLDSCIEHGE Trigger: CTCACCATGTTCAATGCAGGAATCAAGGTGAATGTCATCCCTCCATTGGCTCAGGCTACAATCAACTGCCGAATTCACCCTTCGCAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 90 bp | AGGTGGCTATACTTTGCCACGACTTCATGTTGGACAAGGCTGCTGTaGAACACTGTAGGGAAGGCTTTGCGGATATATTCTCCAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: RWLYFATTSCWTRLL*NTVGKALRIYSPNS Trigger: TGAGTTTGGAGAATATATCCGCAAAGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS-3UTR CAA 90 bp | CACCGCCTCTGGTTTCCACTTGTTCTACTGCATAGCTTATTTCACAGGCTAGTTACCTTGATTCCTGCATaGAACATGGTGAGGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HRLWFPLVLLHSLFHRLVTLIPA*NMVRAV Trigger: CACAGCCCTCACCATGTTCAATGCAGGAATCAAGGT...AACTAGCCTGTGAAATAAGCTATGCAGTAGAACAAGTGGAAACCAGAGGCGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 90 bp | GGGGACGACGATGTCGACTTCCGGGAAGACAGATCGTATGGTCTCTaGAAGCAGCTGGTAGCCCATGGCCTGGTCATCAGAGGGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GDDDVDFREDRSYGL*KQLVAHGLVIRGAD Trigger: ATCAGCCCCTCTGATGACCAGGCCATGGGCTACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCCCGGAAGTCGACATCGTCGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | GGACGACGATGTCGACTTCCGGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGTAGCCCATGGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRRCRLPGRQIV*SLEAAGSPWPG Trigger: ACCAGGCCATGGGCTACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCCCGGAAGTCGACATCGTCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | GGACGACGATGTCGACTTCCGGGAAGACAGATCGTATaGTCTCTTGAAGCAGCTGGTAGCCCATGGCCTGGN | + |
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Preference number: 6 (lower is better) Translates to: GRRCRLPGRQIV*SLEAAGSPWPG Trigger: NCCAGGCCATGGGCTACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCCCGGAAGTCGACATCGTCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152989.2 |
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| CDS CAA 72 bp | TCCCTTCATCCACAAGGAAGGCTAGCTGGACACCCCTaGCCTGTAAGAGTGCTGAGATCTTCTGAGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLHPQGRLAGHP*PVRVLRSSEPP Trigger: AGGGGGCTCAGAAGATCTCAGCACTCTTACAGGCAAGGGGTGTCCAGCTAGCCTTCCTTGTGGATGAAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 72 bp | GTGAGCCATCAGCATGTAGGGCTGCAAACTGGGGTCTaGGCCTTGGATGGTGAACAGGTGGCTATACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: VSHQHVGLQTGV*ALDGEQVAILC Trigger: GCAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACATGCTGATGGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | CTTCTTCAATGGCCCTCCTCCAAACATATTCGGCATTaGTGTCTGCTCCAGTCGGCTGACAGCGGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLQWPSSKHIRH*CLLQSADSGRK Trigger: CTTTCTGCCGCTGTCAGCCGACTGGAGCAGACACCAATGCCGAATATGTTTGGAGGAGGGCCATTGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 72 bp | GATGTCGACTTCCGGGAAGACAGATCGTATGGTCTCTaGAAGCAGCTGGTAGCCCATGGCCTGGTCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: DVDFREDRSYGL*KQLVAHGLVIR Trigger: TCTGATGACCAGGCCATGGGCTACCAGCTGCTTCAAGAGACCATACGATCTGTCTTCCCGGAAGTCGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 72 bp | GGTGAACAGGTGGCTATACTTTGCCACGACTTCATGTaGGACAAGGCTGCTGTGGAACACTGTAGGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GEQVAILCHDFM*DKAAVEHCREG Trigger: GCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 90 bp | GCCTTGGATGGTGAACAGGTGGCTATACTTTGCCACGACTTCATGTaGGACAAGGCTGCTGTGGAACACTGTAGGGAAGGCTTTGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALDGEQVAILCHDFM*DKAAVEHCREGFAD Trigger: ATCCGCAAAGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCACCATCCAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 72 bp | TGTAGGGCTGCAAACTGGGGTCTGAGCCTTGGATGGTaGACAGGTGGCTATACTTTGCCACGACTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: CRAANWGLSLGW*TGGYTLPRLHV Trigger: AACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCACCATCCAAGGCTCAGACCCCAGTTTGCAGCCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 72 bp | CATGCAGCTGGACTCTGTCATCAGCCACGGTGTTCTTaGCAAGTTCTAGGACCTCATGTACTGTCTGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: HAAGLCHQPRCS*QVLGPHVLSAK Trigger: CTTCGCAGACAGTACATGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTGATGACAGAGTCCAGCTGCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | GTGAACAGGTGGCTATACTTTGCCACGACTTCATGTTaGACAAGGCTGCTGTGGAACACTGTAGGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VNRWLYFATTSC*TRLLWNTVGKA Trigger: AGCCTTCCCTACAGTGTTCCACAGCAGCCTTGTCCAACATGAAGTCGTGGCAAAGTATAGCCACCTGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | ATGCCAATGCTTGTCTCCTTTGGGGGAGCTGAAGAGTaGCCTGGAGTCATGTTTACTTGCAGCATGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MPMLVSFGGAEE*PGVMFTCSMRS Trigger: TGACCTCATGCTGCAAGTAAACATGACTCCAGGCCACTCTTCAGCTCCCCCAAAGGAGACAAGCATTGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS TCA 72 bp | TTGCAGCATGAGGTCAAGGGCACCCTTCTCAGTGACTaGAATCATGGCAACTGGCTTCTCGAGGTTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LQHEVKGTLLSD*NHGNWLLEVWN Trigger: ATTCCAAACCTCGAGAAGCCAGTTGCCATGATTTCAGTCACTGAGAAGGGTGCCCTTGACCTCATGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 72 bp | CGGATATATTCTCCAAACTCAGCAAGGGCTGTGGTGTaGGATTCCTCGTGGCTGAAAGACACTGTGGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RIYSPNSARAVV*DSSWLKDTVGI Trigger: GATTCCCACAGTGTCTTTCAGCCACGAGGAATCCAACACCACAGCCCTTGCTGAGTTTGGAGAATATATCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 72 bp | ACATGCAGCTGGACTCTGTCATCAGCCACGGTGTTCTaGACAAGTTCTAGGACCTCATGTACTGTCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: TCSWTLSSATVF*TSSRTSCTVCE Trigger: TTCGCAGACAGTACATGAGGTCCTAGAACTTGTCAAGAACACCGTGGCTGATGACAGAGTCCAGCTGCATGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS GCA 72 bp | CCAGCGCATTTGTTATGGGGTTCCTCTCCATTATCCTaGTCACAATGGGATGAAATAGCCACAGGTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAHLLWGSSPLS*SQWDEIATGFS Trigger: TGAGAAACCTGTGGCTATTTCATCCCATTGTGAGCAGGATAATGGAGAGGAACCCCATAACAAATGCGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | AGGGTGAATTCGGCAGTTGATTGTAGCCTGAGCCAATaGAGGGATGACATTCACCTTGATTCCTGCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVNSAVDCSLSQ*RDDIHLDSCIE Trigger: TTCAATGCAGGAATCAAGGTGAATGTCATCCCTCCATTGGCTCAGGCTACAATCAACTGCCGAATTCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CAA 72 bp | CAGATGAGGAACTGGCTCTTTGTAAGTGTCGGCATTTaGGATGAACTCAAAGATGAACTTCACCTGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QMRNWLFVSVGI*DELKDELHLVL Trigger: CAGAACCAGGTGAAGTTCATCTTTGAGTTCATCCAAAATGCCGACACTTACAAAGAGCCAGTTCCTCATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 ENSMUST00000152989.2 |
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| CDS TCA 72 bp | ATGGGGTTCCTCTCCATTATCCTGCTCACAATGGGATaGAATAGCCACAGGTTTCTCAAGACTATATTGATA | + |
|
Preference number: 6 (lower is better) Translates to: MGFLSIILLTMG*NSHRFLKTILI Trigger: TATCAATATAGTCTTGAGAAACCTGTGGCTATTTCATCCCATTGTGAGCAGGATAATGGAGAGGAACCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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| CDS CCA 72 bp | TTGTTATGGGGTTCCTCTCCATTATCCTGCTCACAATaGGATGAAATAGCCACAGGTTTCTCAAGACTATAT | + |
|
Preference number: 6 (lower is better) Translates to: LLWGSSPLSCSQ*DEIATGFSRLY Trigger: ATATAGTCTTGAGAAACCTGTGGCTATTTCATCCCATTGTGAGCAGGATAATGGAGAGGAACCCCATAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048660.12 ENSMUST00000112393.9 |
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