RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXND1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030123

Ensembl transcript IDs: ENSMUST00000015511.15, ENSMUST00000131590.2

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATaGTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGG +
Preference number: 1 (lower is better)
Translates to: LSPSLHRSVGNGHCP*CHWPMRRLTADLVW
Trigger: CCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp CTGTCAGTTCCCAGCCCAAGTGAGAGATGTGGGGAAGAAACCAAGTaGAGGCCAAGTGGCCTGCACGCCGTCTCCCTGGCCGAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: LSVPSPSERCGEETK*RPSGLHAVSLAEAP
Trigger: AGGAGCTTCGGCCAGGGAGACGGCGTGCAGGCCACTTGGCCTCCACTTGGTTTCTTCCCCACATCTCTCACTTGGGCTGGGAACTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 90 bp CCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCAAGTaGGAGATGTGGGGAAGAAACCAAGTGGAGGCCAAGTGGCCTGCA +
Preference number: 1 (lower is better)
Translates to: PTPSPAGSSVSSQPK*EMWGRNQVEAKWPA
Trigger: TGCAGGCCACTTGGCCTCCACTTGGTTTCTTCCCCACATCTCTCACTTGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR GCA 90 bp TCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTaGCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAAC +
Preference number: 1 (lower is better)
Translates to: SPSLHRSVGNGHCPC*HWPMRRLTADLVWN
Trigger: GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp CCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTaGAACTGTTGGTGGCCAAGGCCCCCTCTGGATGAGGGACACAGA +
Preference number: 1 (lower is better)
Translates to: PCCHWPMRRLTADLV*NCWWPRPPLDEGHR
Trigger: TCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 90 bp GGATATGGCCACCTCTCCCAATGTGTGCTGAGCAGCCTGAAACAGTaGACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: GYGHLSQCVLSSLKQ*TGRHGPGCPGWQGK
Trigger: CTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGCACACATTGGGAGAGGTGGCCATATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp TCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTaGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTGTTGG +
Preference number: 1 (lower is better)
Translates to: SLHRSVGNGHCPCCH*PMRRLTADLVWNCW
Trigger: CCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp TGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTGTTGGTaGCCAAGGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGT +
Preference number: 1 (lower is better)
Translates to: WPMRRLTADLVWNCW*PRPPLDEGHRQLLG
Trigger: ACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp CACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTGTTaGTGGCCAAGGCCCCCTCTGGATGAGGGACACAGACAACTGCTT +
Preference number: 1 (lower is better)
Translates to: HWPMRRLTADLVWNC*WPRPPLDEGHRQLL
Trigger: AAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp TCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGGGAGCCCCTaGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCATAAGT +
Preference number: 1 (lower is better)
Translates to: SVPWNSHFQCVTGSP*GSAQAAAIHSWCIS
Trigger: ACTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACACACTGGAAATGACTGTTCCAGGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp GAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTaGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGATAT +
Preference number: 1 (lower is better)
Translates to: EQPETVNRQAWSRLS*LAGKVLLGTGSDRY
Trigger: ATATCGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 90 bp ACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATaGGGTAGTGTTCTGGGATATGGCCACCTCTCCCAATGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: TTAWWLKQKFPLPGG*GSVLGYGHLSQCVL
Trigger: CAGCACACATTGGGAGAGGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 90 bp ATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTaGCAGCGATCGATATTCAAGGCCTTCATCCTAGAGTTGGGTCTT +
Preference number: 1 (lower is better)
Translates to: MVQAVLVGRESLIRD*QRSIFKAFILELGL
Trigger: AAGACCCAACTCTAGGATGAAGGCCTTGAATATCGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR GCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAGGAGGCCAAGTGGCCTaGACGCCGTCTCCCTGGCCG +
Preference number: 2 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGAGGQVA*TPSPWP
Trigger: CGGCCAGGGAGACGGCGTGCAGGCCACTTGGCCTCC...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR GCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTTGGAGGGGACAGAGATaGCCCAGGGGACAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: PFCGQWALPMLPLANETAWRGQR*PRGQGQ
Trigger: TTGGCCTTGTCCCCTGGGGCATCTCTGTCCCCTCCA...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCGTGAACAGGCAGGCATaGTCCAGGCTGTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: LSSPATALHPRLPPFPGAVNRQA*SRLSWL
Trigger: CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCAC...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCCTCTCCACCGTTCTGTaGGCAATGGGCACTGCCCAT +
Preference number: 2 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCLSTVL*AMGTAH
Trigger: ATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAG...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGGGGAAGAAACCAAGTaGAGGCCAAGTGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADGEETK*RPSGLH
Trigger: GTGCAGGCCACTTGGCCTCCACTTGGTTTCTTCCCC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGTTTGGAACTGTTGGTaGCCAAGGCCCCCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADVWNCW*PRPPLD
Trigger: ATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAAC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGTGGGTCTTGGGCAGGTaGAGGGGACAGAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPWVLGR*RGQRCP
Trigger: GGGGCATCTCTGTCCCCTCCACCTGCCCAAGACCCA...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CCA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCCCGTTCTGTGGGCAATaGGCACTGCCCATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPPFCGQ*ALPMLP
Trigger: TGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR TCA 90 bp CTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCATAAGTTTTTGTTTAGCAGCCTGAAACAGTaGACAGGCAGGCATGGTCCA +
Preference number: 2 (lower is better)
Translates to: LGICTSGSYSQLVHKFLFSSLKQ*TGRHGP
Trigger: TGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCT...AAACAAAAACTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp CCCAGCCCAAGTGAGAGATGTGGGGAAGAAACCAAGTaGAGGCCAAGTGGCCTGCACGCCGTCTCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: PSPSERCGEETK*RPSGLHAVSLA
Trigger: GGCCAGGGAGACGGCGTGCAGGCCACTTGGCCTCCACTTGGTTTCTTCCCCACATCTCTCACTTGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 72 bp CCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTaGCCTGGTTTGGAACTGTTGGTGGCCAAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: PMLPLANETANS*PGLELLVAKAP
Trigger: GGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR GCA 72 bp TCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTaGCCATGCTGCCACTGGCCAATGAGACGGCTAACA +
Preference number: 3 (lower is better)
Translates to: SPSLHRSVGNGH*PCCHWPMRRLT
Trigger: TGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CAA 90 bp TCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGGCCTTCATCCTAGAGTaGGGTCTTGGGCAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: SLHRSVGNGHCPCCHWPMAFILE*GLGQVE
Trigger: CTCCACCTGCCCAAGACCCAACTCTAGGATGAAGGC...CATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTaGCCAATGAGACGGCTAACAGCTGACCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: RSVGNGHCPCCH*PMRRLTADLVW
Trigger: CCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR-3UTR CAA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGACACAGACAACTGCTaGGTGGCTGAAGCAGAAATT +
Preference number: 3 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLDTDNC*VAEAEI
Trigger: AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTC...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 72 bp GGTTTGGAACTGTTGGTGGCCAAGGCCCCCTCTGGATaGGGGACACAGACAACTGCTTGGTGGCTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: GLELLVAKAPSG*GTQTTAWWLKQ
Trigger: CTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp ACCTGGTTTGGAACTGTTGGTGGCCAAGGCCCCCTCTaGATGAGGGACACAGACAACTGCTTGGTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: TWFGTVGGQGPL*MRDTDNCLVAE
Trigger: TTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp AGACGGCTAACAGCTGACCTGGTTTGGAACTGTTGGTaGCCAAGGCCCCCTCTGGATGAGGGACACAGACAA +
Preference number: 3 (lower is better)
Translates to: RRLTADLVWNCW*PRPPLDEGHRQ
Trigger: TTGTCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp ATGAGACGGCTAACAGCTGACCTGGTTTGGAACTGTTaGTGGCCAAGGCCCCCTCTGGATGAGGGACACAGA +
Preference number: 3 (lower is better)
Translates to: MRRLTADLVWNC*WPRPPLDEGHR
Trigger: TCTGTGTCCCTCATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCGTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp TGGAACAGTCATTTCCAGTGTGTCACCGGGAGCCCCTaGGGATCTGCACAAGCGGCAGCTATTCACAGTTGG +
Preference number: 3 (lower is better)
Translates to: WNSHFQCVTGSP*GSAQAAAIHSW
Trigger: CCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACACACTGGAAATGACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR GCA 72 bp TCATTTCCAGTGTGTCACCGGGAGCCCCTGGGGATCTaGACAAGCGGCAGCTATTCACAGTTGGTGCATAAG +
Preference number: 3 (lower is better)
Translates to: SFPVCHREPLGI*TSGSYSQLVHK
Trigger: CTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACACACTGGAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CCA 72 bp TGTGCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATaGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTA +
Preference number: 3 (lower is better)
Translates to: CAEQPETVNRQA*SRLSWLAGKVL
Trigger: TAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 72 bp TGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATaGGGTAGTGTTCTGGGATATGGCCACCTCTCCCAA +
Preference number: 3 (lower is better)
Translates to: WWLKQKFPLPGG*GSVLGYGHLSQ
Trigger: TTGGGAGAGGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR TCA 72 bp CCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTaGAGCAGAAATTCCCTCTGCCAGGTGGATGAGGTA +
Preference number: 3 (lower is better)
Translates to: PLDEGHRQLLGG*SRNSLCQVDEV
Trigger: TACCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTTGGTCCTGCCGCCACTaGCAGGGCTGCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPWSCRH*QGCGLG
Trigger: GCCCAGGCCGCAGCCCTGTCAGTGGCGGCAGGACCA...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTGGGAGCTGCGGGGCGTaGCACAGCGGGCTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETAGSCGA*HSGLSG
Trigger: GCCGGACAGCCCGCTGTGTCACGCCCCGCAGCTCCC...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGGCTCACGGCCAGGGCTaGGATGTTGCCCCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SRALRGQCPPLLAQQAPLAHGQG*DVAPAP
Trigger: AGGCGCCGGGGCAACATCTCAGCCCTGGCCGTGAGC...CAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCGCCGAGGCGTCGATaGGGTCCACGAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSPPRRR*GPRAAP
Trigger: AGGAGCTGCTCGTGGACCTCATCGACGCCTCGGCGG...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCGCAGGGACGCCAGGCTaGACCTGTCACGCACTGCGA +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSAGTPG*TCHALR
Trigger: TCGCAGTGCGTGACAGGTGCAGCCTGGCGTCCCTGC...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCAGAGGGGAAACGGCGCTaGATCTCTAGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GQCPPLLAQQAPLSVPSPEGKRR*ISRAPA
Trigger: GGCCGGCGCCCTAGAGATCCAGCGCCGTTTCCCCTC...TGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCTCACGGCCCAGGCACTaGGAACAGTCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSSRPRH*EQSGLP
Trigger: GGGCAGCCCTGACTGTTCCCAGTGCCTGGGCCGTGA...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCGCACCTGGGGCGCCCTaGGGCCTCTCGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCAPGAP*GLSKTA
Trigger: CGCTGTCTTCGAGAGGCCCCAGGGCGCCCCAGGTGC...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCGGCCGTGTAGTTGTTaGCACTGGCCACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSRPCSC*HWPQPR
Trigger: CCGTGGCTGTGGCCAGTGCCAACAACTACACGGCCG...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCAAGGGCAGTACTGTCATaGCAGGGCAGCGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQCPPLLAQQAPLSVPSPRAVLS*QGSGWG
Trigger: GCCCCAGCCGCTGCCCTGCCATGACAGTACTGCCCT...TGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCTGCTGGGGAACACGGTaGCCGGTTCTGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: LSSPATALHPRLPPFPGACWGTR*PVLRSA
Trigger: CGCCGACCGCAGAACCGGTCACCGTGTTCCCCAGCA...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSKPSLC*SLAPCL
Trigger: CAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTT...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTCCACGAAGCAGGCGGTaGGCGCTGCACGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: TRPRARQPGTKRPVSPTPPRSRR*ALHEWQ
Trigger: CTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGG...AGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCACAATGGCCGTCTCGCTaGCCCCCAGTTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GQCPPLLAQQAPLSVPSPQWPSR*PPVAVW
Trigger: CCACACTGCAACTGGGGGGCAGCGAGACGGCCATTG...TGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTGGCTGGGGCCCTCACTaGCACTGGTCCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPGWGPH*HWSRNV
Trigger: CACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCC...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCGGTTGGCGGCCACGTTaGGCATGCTGGGGAACACGG +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCGWRPR*ACWGTR
Trigger: CCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACC...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTTCCCCACCTGGATTGTaGTGGGCAGCTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPSPPGL*WAAVLQ
Trigger: CTGAAGGACAGCTGCCCATCACAATCCAGGTGGGGA...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAAGGTGAGGTTTCCGTaGACGCAGCCCCGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TRPRARQPGTKRPVSPTPKVRFP*TQPRLS
Trigger: CGAGAGCCGGGGCTGCGTGCACGGAAACCTCACCTT...AGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAGCGACCACCAGACCCTaGCCCGGGTCCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLATTRP*PGSNCR
Trigger: CCTGCAGTTGGACCCGGGCCAGGGTCTGGTGGTCGC...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGCGAAGCCGGTGTACGTaGCGCCCACGAGCAGACGGC +
Preference number: 4 (lower is better)
Translates to: QPETVNRQAWSRLSWLAGRSRCT*RPRADG
Trigger: GCCGTCTGCTCGTGGGCGCCACGTACACCGGCTTCG...CCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGCCACTCTCCCAGCAGTaGGTGGGTTTCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLPLSQQ*VGFLWR
Trigger: CCGCCACAGGAAACCCACCCACTGCTGGGAGAGTGG...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGTGAGGAGAACAGGCTaGTCCCCTCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLVRRTG*SPPPCW
Trigger: CCAGCATGGAGGAGGGGATCAGCCTGTTCTCCTCAC...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCACGCCCGCGGCCACTGTaGGTAGGGGACGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGARPRPL*VGDVLA
Trigger: TGCAAGAACGTCCCCTACTCACAGTGGCCGCGGGCG...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGCCGCCAAGTACACGGTaGCCGCCGTGCCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSPPSTR*PPCRPG
Trigger: CCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGG...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPATALHPRLPPFPGATKPSL*CSLAPC
Trigger: GCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGT...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTATGGTCAGTGGGTGCTaGAGGTGGGCCGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETAMVSGC*RWAAPQ
Trigger: TTGCGGAGCGGCCCACCTGCAGCACCCACTGACCAT...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAAGGATGGTCAGTGGGTaGTGCAGGTGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGARMVSG*CRWAAP
Trigger: CGGAGCGGCCCACCTGCAGCACCCACTGACCATCCT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGCCCCTCTGTGCCTCTaGAGGGTCCAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADAPLCL*RVQQLL
Trigger: GAGGAGCTGCTGGACCCTGCAGAGGCACAGAGGGGC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCGCGAAGTCCTTCTGCTaGTCCAGAGCATGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSAKSFC*SRAWTK
Trigger: CTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGC...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGTGGACGCGTTGGGGTaGTTGGCGGCCACGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADVDALG*LAATLS
Trigger: GCTCAACGTGGCCGCCAACCACCCCAACGCGTCCAC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGCCACAGTGGACGCGTTaGGGTGGTTGGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: QPETVNRQAWSRLSWLAGPQWTR*GGWRPR
Trigger: ACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGG...CCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGAGCAGGCTGCGCGCCTaGCTGTCCTTGTCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLSRLRA*LSLSPA
Trigger: TGCGGGCGACAAGGACAGCCAGGCGCGCAGCCTGCT...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTACTGCAGGATGGTCAGTaGGTGCTGCAGGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLLQDGQ*VLQVGR
Trigger: GCGGCCCACCTGCAGCACCCACTGACCATCCTGCAG...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTTCGGATTTCAGGGGCTaGGCAGGTGCCAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETASDFRG*AGAREW
Trigger: CCACTCCCTGGCACCTGCCCAGCCCCTGAAATCCGA...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAGGCGGGGAGCCACCCTaGGAGTTGAGGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGAGGEPP*ELRVFE
Trigger: CTCGAAGACCCTCAACTCCCAGGGTGGCTCCCCGCC...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGCACCGTTACCACGTCTaGGAAGGCCCCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLHRYHV*EGPCGR
Trigger: CCTGCCGCAGGGGCCTTCTCAGACGTGGTAACGGTG...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTGTACCTCACACGCTaGCACCTTCACTCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RALRGQCPPLLAQQAPLSVYLTR*HLHSGH
Trigger: ATGGCCCGAGTGAAGGTGGCAGCGTGTGAGGTACAC...TGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTGCAGCACCACTTGGTTaGAGCGGACCAGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPAAPLG*SGPVSY
Trigger: ATAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGC...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGCTAGGCGGAACCGGCTaGCCCTCTGTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLLGGTG*PSVPLQ
Trigger: CTGCAGAGGCACAGAGGGGCAGCCGGTTCCGCCTAG...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAAGTTGTTGGTGGGCGTaGGCGAGGGGAAACGGCGCT +
Preference number: 4 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGASCWWA*ARGNGA
Trigger: AGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTTCAGCGGCTGCAGGATaGTCAGTGGGTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETASAAAG*SVGAAG
Trigger: ACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGA...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCCGGCCTTTGGGCCCATaGAAGGCTCCAGTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCRPLGP*KAPVSG
Trigger: TCCACTCACTGGAGCCTTCCATGGGCCCAAAGGCCG...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTGTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGGGCAGGGTACCCCCTaGCACAGTGCAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: VSPGAPGDLHKRQLFTVGGQGTP*HSAGDA
Trigger: AGCATCACCTGCACTGTGCCAGGGGGTACCCTGCCC...ACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAGACAGGGCTGCGGCCTaGGCTGATGGCTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLDRAAA*ADGCDD
Trigger: GTCATCACAGCCATCAGCCCAGGCCGCAGCCCTGTC...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCCGGCACGGCGGCTCTTaGTGCAGAAGACGAACAGAG +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCRHGGS*CRRRTE
Trigger: CTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCG...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTATCTCCCAGCAGTGGGTaGGTTTCCTGTGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLSPSSG*VSCGGE
Trigger: CTCCCCGCCACAGGAAACCCACCCACTGCTGGGAGA...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTATCTGCAGCGTGCCCTTaGTGGACAGCAGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLSAACP*WTAGGS
Trigger: TGACCCGCCTGCTGTCCACCAAGGGCACGCTGCAGA...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTGGGTCCTGCGGGCTGTaGGGTTGGCCTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEIGSCGL*GWPPGQ
Trigger: CTGCCCTGGAGGCCAACCCCACAGCCCGCAGGACCC...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACATCTGGGGACAGTCCTaGGGACTCGTGGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADIWGQS*GLVGFG
Trigger: GCCAAACCCCACGAGTCCTCAGGACTGTCCCCAGAT...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACCTGGCACAGTGCAGGTaGTGCTGGTGGCTGTGCGCG +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNLAQCR*CWWLCA
Trigger: CGCGCACAGCCACCAGCATCACCTGCACTGTGCCAG...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTGCATGTACCAGAAGGTaGGGTTTCCGTGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETAACTRR*GFRARS
Trigger: GCTGCGTGCACGGAAACCTCACCTTCTGGTACATGC...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCCATGGCCCGCACGCTaGGGGAGTCCATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDPWPAR*GSPSHS
Trigger: GCTGTGGGATGGACTCCCTCAGCGTGCGGGCCATGG...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGCCGTCCTCCACCACTaGTGTGTCATCCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: EQPETVNRQAWSRLSWLAAVLHH*CVIQVP
Trigger: CGGGACCTGGATGACACATCAGTGGTGGAGGACGGC...TGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGTCATTTCCTGCTCGCTaGGCGGCGTCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLSFPAR*AASCLG
Trigger: TCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGA...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGACACGGTGCCCGCCGTaGCGTCCAGGGCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSTRCPP*RPGRSC
Trigger: ACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGT...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATGCCGGCCCGGTGCCCTaGACCACACTGTCCAACACC +
Preference number: 4 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDAGPVP*TTLSNT
Trigger: GGTGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGC...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTCACGGCGGCTCTTGGTaGAGAAGACGAACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TRPRARQPGTKRPVSPTPHGGSW*RRRTEQ
Trigger: TTGCTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTG...AGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCGCACCTGTCACGCACTaGGAAGTCCTTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCAPVTH*EVLLLL
Trigger: GAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGC...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTATCTTCTCCTTCACCTaGGTCAGCGTGTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TRPRARQPGTKRPVSPTPIFSFT*VSVSVS
Trigger: GGACACCGACACGCTGACGCAGGTGAAGGAGAAGAT...AGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAATCGATGAAGGCCTGTaGGATGACAGACAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RALRGQCPPLLAQQAPLSIDEGL*DDRQAG
Trigger: GCCTGCCTGTCTGTCATCGCACAGGCCTTCATCGAT...TGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACACAGACCCTGGTAGATaGAGCCGCACGCGACCACCA +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADTDPGR*SRTRPP
Trigger: TGGTGGTCGCGTGCGGCTCCATCTACCAGGGTCTGT...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCGAACCTTGCAGAACGTaGGCTCCCGGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCEPCRT*APGQCG
Trigger: ACCACATTGGCCGGGAGCCCACGTTCTGCAAGGTTC...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTTTGAAGTTCCCCACCTaGATTGTGATGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPLKFPT*IVMGSC
Trigger: ACAGCTGCCCATCACAATCCAGGTGGGGAACTTCAA...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGTGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RDTDNCLVAEAEIPSARWCCSCP*GAAGAR
Trigger: GCGAGCACCCGCGGCGCCTCACGGACAACTACAACA...CCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCCACGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGG +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATHAPRC*APGTRR
Trigger: CCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGTG...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTCCGTGCGCCGCAACATaGGCTTGGGGTTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTPCAAT*AWGSWP
Trigger: CGGCCAAGAACCCCAAGCTCATGTTGCGGCGCACGG...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGGTGCCAGGGAGTGGCTaGAGGGGCCCTCTTAGACGA +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSVPGSG*RGPLRR
Trigger: TCGTCTAAGAGGGCCCCTGCAGCCACTCCCTGGCAC...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTGTCAGGGTCGGAGATaGCTCTCTTCTCCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQCQGRR*LSSPPV
Trigger: AACAGGCGGAGAAGAGAGGCATCTCCGACCCTGACA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGGGCACTGAGACTGGTTaGAGACACATGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRALRGQCPPLLAQQAPLGTETG*RHMNAA
Trigger: AGCTGCATTCATGTGTCTCCAACCAGTCTCAGTGCC...CAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTTGATGTGGTACTCATaGCTCTCCAGCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQLMWYS*LSSPRL
Trigger: CAGCCTGGGGCTGGAGAGCCATGAGTACCACATCAA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAGTGTGGCGATGGTCTaGTTGAAGTTCCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCSVAMV*LKFPTW
Trigger: CCAGGTGGGGAACTTCAACCAGACCATCGCCACACT...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAAGAAGGGGATGCCCTaGCTGCGGTTCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLHRSVGNGHCPCCHWPMKKGMP*LRFSSL
Trigger: CAAGGAGCTGAACCGCAGCCAGGGCATCCCCTTCTT...CATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGGCAGGGGAAGGCTGTTaGTCTTCCAGATATGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQAGEGC*SSRYAG
Trigger: CCCTGCATATCTGGAAGACCAACAGCCTTCCCCTGC...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSGCRTR*ASWRRH
Trigger: GTGGCGACGCCAAGAAGCTCACCGAGTCCTACATCC...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCTTGAGGTCACTGCCGTaGATGGTGATCCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: LSSPATALHPRLPPFPGALRSLP*MVILVP
Trigger: GGGTACAAGGATCACCATTCACGGCAGTGACCTCAA...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp ACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGTCAAAGAAATACTTaGCAGCCAGCGGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TRPRARQPGTKRPVSPTPSQRNT*QPAGAC
Trigger: ACAAGCCCCCGCTGGCTGTCAAGTATTTCTTTGACT...AGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGCGCCTGCTTACTACCTaGATGCTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QPETVNRQAWSRLSWLAGRLLTT*MLSFRL
Trigger: CAGCCTGAACGAGAGCATGCAGGTAGTAAGCAGGCG...CCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCACCCTGGGCAGGAGATTaGAGTAGGCAATCTGATGAT +
Preference number: 4 (lower is better)
Translates to: RALRGQCPPLLAQQAPLSPWAGD*SRQSDD
Trigger: ATCATCAGATTGCCTACTGCAATCTCCTGCCCAGGG...TGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCTCCATCTCTTCCATCTaGAGCAGGGTCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCSISSI*SRVFCQ
Trigger: CTGGCAGAAGACCCTGCTGCAGATGGAAGAGATGGA...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp ATCGATATTCAAGGCCTTCATCCTAGAGTTGGGTCTTGGGCAGGTGGAGGGGACCCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IDIQGLHPRVGSWAGGGDPGRSC*WAWARG
Trigger: TCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGG...GTCCCCTCCACCTGCCCAAGACCCAACTCTAGGATGAAGGCCTTGAATATCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGCTTGGGAGCCACCTGTaGGCACGGGCGCTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPLGSHL*ARALGA
Trigger: CGCCCCTAGCGCCCGTGCCCACAGGTGGCTCCCAAG...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCTGCGGCAGGCCCTGTaGCACACACGATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEILRQAL*HTRSPL
Trigger: CAGAGGAGATCGTGTGTGCCACAGGGCCTGCCGCAG...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTTGTACCCCCGGCCTTTaGGCCCATGGAAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTCTPGL*AHGRLQ
Trigger: CTGGAGCCTTCCATGGGCCCAAAGGCCGGGGGTACA...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTCACACACACAGGCACTaGAGAGGGCAGGGTACCCCC +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTHTHRH*RGQGTP
Trigger: GGGGGTACCCTGCCCTCTCCAGTGCCTGTGTGTGTG...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTGCTGCTCCAGAGCATaGACGAAGACGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQCCSRA*TKTMRK
Trigger: CTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTCAAGTTCCGGGGCTTaGCCTCAATGTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQSSSGA*PQCSPS
Trigger: TGAGGGAGAACATTGAGGCCAAGCCCCGGAACTTGA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTACTCCTGGGTGATGTTTaGTCCACTTCTCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLLLGDV*STSPSW
Trigger: CCAAGAGGGAGAAGTGGATCAAACATCACCCAGGAG...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTGTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGGAAGTGCTTGTTGTTaGGCAGTGAGGAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: VSPGAPGDLHKRQLFTVGGSACC*AVRRTG
Trigger: GCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCC...ACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGACGGAACACGGGCGATaGCCTCAGCGGCTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRTEHGR*PQRLQD
Trigger: ATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGT...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACGACGGCCCAAGTTCCTaGCACGGATGGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNDGPSS*HGWSAK
Trigger: CTTTGCTGACCATCCGTGGCAGGAACTTGGGCCGTC...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTCCGTCATGTCTGTCTaGAGCTCCGCAAAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQSVMSV*SSAKPL
Trigger: TAAAGGCTTTGCGGAGCTGCAGACAGACATGACGGA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGAGCAAGGCCACTGTGTaGACAGGCAGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSSKATV*TGSWYR
Trigger: CCTGTACCAGCTGCCTGTCCACACAGTGGCCTTGCT...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCGGCACCAGGATGTCTTaGGAGCCACCTGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATGTRMS*EPPVGT
Trigger: CGTGCCCACAGGTGGCTCCCAAGACATCCTGGTGCC...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCAATACCTGGCTCTTCTaGGTTGTGTGCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: LSSPATALHPRLPPFPGANTWLF*VVCSTT
Trigger: AGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATT...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGCAGCTTCAGACTCAGTaGAAATACCTGGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLQLQTQ*KYLALL
Trigger: CAGAAGAGCCAGGTATTTCCACTGAGTCTGAAGCTG...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGTGGAGAACTGTGGGTTaGGGAGGTAGTCTAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLWRTVG*GGSLGG
Trigger: TCCGCCTAGACTACCTCCCCAACCCACAGTTCTCCA...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTAACTTGTGCTGTAGCTaGGTCCTGCGGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEINLCCS*VLRAVG
Trigger: CCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTT...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCACCTTGGCGCCCTGCTTaGTCTTCAGGATGTTATCGT +
Preference number: 4 (lower is better)
Translates to: EQPETVNRQAWSRLSWLAPWRPA*SSGCYR
Trigger: ACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGG...TGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGCATGGAAGGCTCCAGTaGGTGGACTGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRHGRLQ*VDCGQH
Trigger: GTGCTGCCCACAGTCCACTCACTGGAGCCTTCCATG...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGCTTGTTGTTGAGCAGTaGGGAGAACAGGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLLVVEQ*GEQADP
Trigger: GGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAG...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp ATCGATATTCAAGGCCTTCATCCTAGAGTTGGGTCTTGGGCAGGTGGAGGGGACGCAGCCACTCCTCGTTaGGTGTGTAGCGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IDIQGLHPRVGSWAGGGDAATPR*VCSGLC
Trigger: GCAAAGCCCGCTACACACTCAACGAGGAGTGGCTGC...GTCCCCTCCACCTGCCCAAGACCCAACTCTAGGATGAAGGCCTTGAATATCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTCGGTGGCTCTGCCGGTaGGATTTCTTAGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTRWLCR*DFLGST
Trigger: GGTAGAGCCTAAGAAATCTCACCGGCAGAGCCACCG...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCCTCCAGGGCAGCCATaGTCTGTGGTCGATACCTCT +
Preference number: 4 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDPPGQP*SVVDTS
Trigger: AGAGGTATCGACCACAGATCATGGCTGCCCTGGAGG...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGACCGGGTCTCCAGAGTaGACCAACCACAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSTGSPE*TNHSRH
Trigger: ATGCCTACTGTGGTTGGTGCACTCTGGAGACCCGGT...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTGCCATTGATACATTCTaGACCATGTGGAAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETAAIDTF*TMWKRS
Trigger: CGAACGCTTCCACATGGTGCAGAATGTATCAATGGC...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTGTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTTGCCTCGTCTGCATATaGCCGGCCATTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: VSPGAPGDLHKRQLFTVGCLVCI*PAIDEE
Trigger: TTCTTCATCAATGGCCGGGCATATGCAGACGAGGCA...ACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
3UTR CAA 72 bp TGGCAGCGATCGATATTCAAGGCCTTCATCCTAGAGTaGGGTCTTGGGCAGGTGGAGGGGACAGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: WQRSIFKAFILE*GLGQVEGTEMP
Trigger: GGGCATCTCTGTCCCCTCCACCTGCCCAAGACCCAACTCTAGGATGAAGGCCTTGAATATCGATCGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTGCAGTCGTAGATGGTaGAATTGGCTGAGACAATGT +
Preference number: 4 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQCSRRW*NWLRQC
Trigger: ACATTGTCTCAGCCAATTTCACCATCTACGACTGCA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATAGCGGCTCTCCTGGGTaGTGTTTGATCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDSGSPG*CLIHFS
Trigger: GGAGAAGTGGATCAAACATCACCCAGGAGAGCCGCT...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTTGGCGATGGTCTGGTTaGAGTTCCCCACCTGGATTG +
Preference number: 4 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEIWRWSG*SSPPGL
Trigger: CAATCCAGGTGGGGAACTTCAACCAGACCATCGCCA...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGGCGGGAAGAAAGCGCTaGCGAAGCCGGTGTACGTGG +
Preference number: 4 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPAGRKR*RSRCTW
Trigger: CCACGTACACCGGCTTCGGCAGCGCTTTCTTCCCGC...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCATAAGTTTTTGTTTTGCGCGCCAGCAGGCTaGGCGCCTGGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGICTSGSYSQLVHKFLFCAPAG*APGCPC
Trigger: ACAAGGACAGCCAGGCGCGCAGCCTGCTGGCGCGCA...AAACAAAAACTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACCAGTCAGCACTCGCCTaGTTACTACCTGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNQSALA*LLPACS
Trigger: AGAGCATGCAGGTAGTAAGCAGGCGAGTGCTGACTG...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTCAGGCAGCCGTACATaGAGATGGACATCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNSGSRT*RWTSSW
Trigger: CCAACTGGATGTCCATCTGCATGTACGGCTGCCTGA...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTACCTTTGTTGATCTGCTaGTTGATGGCACACAACAGC +
Preference number: 4 (lower is better)
Translates to: RSVGNGHCPCCHWPMRRLPLLIC*LMAHNS
Trigger: GCTGTTGTGTGCCATCAAGCAGCAGATCAACAAAGG...TAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CGGCTAACAGCTGACCTGGTTTGGAACTGTTGGTGGCCAAGGCCCCCTCTGGATAGTAGGGGACGTTCTTaGAGAAGGCTTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RLTADLVWNCWWPRPPLDSRGRS*RRLPGS
Trigger: AGATCCTGGAAGCCTTCTGCAAGAACGTCCCCTACT...ATCCAGAGGGGGCCTTGGCCACCAACAGTTCCAAACCAGGTCAGCTGTTAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCTGGTGGGTGAGTCCTTaGCCAGCTGCAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATWWVSP*PAAGQR
Trigger: TCTCTGACCTGCAGCTGGGCAAGGACTCACCCACCA...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp ATCGATATTCAAGGCCTTCATCCTAGAGTTGGGTCTTGGGCAGGTGGAGGGGACCTCCTCGGCCAGGTGTaGGTTCATTTCCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: IDIQGLHPRVGSWAGGGDLLGQV*VHFLLA
Trigger: AGCGAGCAGGAAATGAACGCACACCTGGCCGAGGAG...GTCCCCTCCACCTGCCCAAGACCCAACTCTAGGATGAAGGCCTTGAATATCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGACTCGGGCCATCTGGTaGGATGTCATCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSTRAIW*DVIRYR
Trigger: CCTATACCTGATGACATCCCACCAGATGGCCCGAGT...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGATGGCTGTGATGACTaGGTTCTGCATGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADDGCDD*VLHVPE
Trigger: TTCTGGTACATGCAGAACCCAGTCATCACAGCCATC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGACATTCTGCACCATGTaGAAGCGTTCGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSTFCTM*KRSPAT
Trigger: TGTGGCTGGCGAACGCTTCCACATGGTGCAGAATGT...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGGGTGAGCGGCTCTCCTaGGTGATGTTTGATCCACTT +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSGERLS*VMFDPL
Trigger: AAGTGGATCAAACATCACCCAGGAGAGCCGCTCACC...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTTCATTGACTGAGCAGTaGATGACTCTGTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PFCGQWALPMLPLANETASLTEQ*MTLSEM
Trigger: CATCTCAGACAGAGTCATCCACTGCTCAGTCAATGA...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGTCCATCCCACAGCCCTaGAAGGACACGTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSSIPQP*KDTFKF
Trigger: GAACTTGAACGTGTCCTTCCAGGGCTGTGGGATGGA...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTAGGCAGGCGTCGATGTaGTCCGTCTTCTCTATGTCG +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTRQASM*SVFSMS
Trigger: CGACATAGAGAAGACGGACCACATCGACGCCTGCCT...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACACACCTGGCCAATCTTaGTGTGGTACTCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNTPGQS*CGTHGS
Trigger: AGAGCCATGAGTACCACATCAAGATTGGCCAGGTGT...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGCAGCGACTCATTGACTaGGCAGTGGATGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RDTDNCLVAEAEIPSARWQRLID*AVDDSV
Trigger: GACAGAGTCATCCACTGCTCAGTCAATGAGTCGCTG...CCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTGGTTCAGCTCCTTGGTaGGATCCGTCATGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEIGSAPW*DPSCLS
Trigger: AGACAGACATGACGGATCTCACCAAGGAGCTGAACC...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGCGAGCAGCTCCTTCATaGTGCTCGTATAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSRAAPS*CSYSTP
Trigger: TGGAGTACTATACGAGCATCATGAAGGAGCTGCTCG...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGAGCGGGCTTTGCCTGTaGTGGCGTCGATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPSGLCL*WRRWSL
Trigger: AAGGCTCCATCGACGCCATCACAGGCAAAGCCCGCT...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GTGTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTTGGCCACGTTTGTGTTaGACTCATTCTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: VSPGAPGDLHKRQLFTVGWPRLC*THSGIS
Trigger: GGAAATACCAGAATGAGTTCAACACAAACGTGGCCA...ACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGTGCTCCTTGGCGCCCTaGTTGATCTTCAGGATGTTA +
Preference number: 4 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSCSLAP*LIFRML
Trigger: TAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCA...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAAAGACGATGAGGAAGTaGTTGTTGTTGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGAKTMRK*LLLSSE
Trigger: CTCACTGCTCAACAACAAGCACTTCCTCATCGTCTT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGTCCAGAAATGTGGCTaGCTGGAGTTGGTGCAATCC +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTVQKCG*LELVQS
Trigger: GGATTGCACCAACTCCAGCCAGCCACATTTCTGGAC...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGGGAAAGGATGGAAACTaGGCCCTGGGCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRGKDGN*ALGRRL
Trigger: CAATCTCCTGCCCAGGGCCCAGTTTCCATCCTTTCC...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCTCCCGGCCAATGTaGTGTACAGCCATTGATACA +
Preference number: 4 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTGSRPM*CTAIDT
Trigger: TGTATCAATGGCTGTACACCACATTGGCCGGGAGCC...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGTGGGGTCAAACTGCATaGCGTGATGCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPWGQTA*RDAQAP
Trigger: GGGAGCCTGTGCATCACGTCATGCAGTTTGACCCCA...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACGTGGTGTACAGCCATTaGTACATTCTGCACCATGTG +
Preference number: 4 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNVVYSH*YILHHV
Trigger: CACATGGTGCAGAATGTATCAATGGCTGTACACCAC...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPGRSCW*AWARGN
Trigger: GTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCC...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGGTGTTCTCGAAGCGGTaGTCTTCTAGGCTACGGTTG +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRVFSKR*SSRLRL
Trigger: CAACCGTAGCCTAGAAGACCACCGCTTCGAGAACAC...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGAGAGGGAAGAGCACTTaGGGAAGAAGGTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: RDTDNCLVAEAEIPSARWRGKST*GRRFES
Trigger: TGACTCGAACCTTCTTCCCCAAGTGCTCTTCCCTCT...CCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp GAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGATGGTGAAATTGGCTaGGACAATGTTGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EQPETVNRQAWSRLSWLADGEIG*DNVVSF
Trigger: AAAGGACACAACATTGTCTCAGCCAATTTCACCATC...TGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGAGAAATGTGGCTGGCTaGAGTTGGTGCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRRNVAG*SWCNPA
Trigger: AGCAGGATTGCACCAACTCCAGCCAGCCACATTTCT...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCGGCCCTCACTGGCACTaGTCCAGAAATGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPGPHWH*SRNVAG
Trigger: GCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCC...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCCTCAGTGGAAATACCTaGCTCTTCTGGGTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATLSGNT*LFWVVC
Trigger: GCACACAACCCAGAAGAGCCAGGTATTTCCACTGAG...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGTAGGTAGCACCAAATaGAAATACTTTTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADVGSTK*KYFSVS
Trigger: GGACACAGAAAAGTATTTCCATTTGGTGCTACCTAC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR TCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCGTGGATGACTCTGTCTaGGATGATTTGGATGTCGCA +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATVDDSV*DDLDVA
Trigger: TGCGACATCCAAATCATCTCAGACAGAGTCATCCAC...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCGAGCCTTTGTTGATCTaGTGCTTGATGGCACACAAC +
Preference number: 4 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATEPLLI*CLMAHN
Trigger: GTTGTGTGCCATCAAGCAGCAGATCAACAAAGGCTC...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCTGTGCGTTCATTTCCTaGTCGCTGAGCGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPCAFIS*SLSGVM
Trigger: CATGACGCCGCTCAGCGAGCAGGAAATGAACGCACA...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGGTGTTGAACTCATTCTaGTATTTCCGAGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRVLNSF*YFRDSS
Trigger: CGAGGAGTCTCGGAAATACCAGAATGAGTTCAACAC...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR GCA 90 bp CTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCATAAGTTTTTGTTTGTTCACAGGCCACACTaGCAATCCACACACCATGTG +
Preference number: 4 (lower is better)
Translates to: LGICTSGSYSQLVHKFLFVHRPH*QSTHHV
Trigger: CACATGGTGTGTGGATTGGCAGTGTGGCCTGTGAAC...AAACAAAAACTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp CTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCATAAGTTTTTGTTTACTGGTCCAGAAATGTaGCTGGCTGGAGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGICTSGSYSQLVHKFLFTGPEM*LAGVGA
Trigger: TGCACCAACTCCAGCCAGCCACATTTCTGGACCAGT...AAACAAAAACTTATGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CCA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCTCGAGGGAGGAACCATaGAAGAAGGTGGCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPSREEP*KKVALV
Trigger: GACTAAAGCCACCTTCTTCCATGGTTCCTCCCTCGA...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp AGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGGAGCTGCGGGGCGTaGCACAGCGGGCTGTCCGGCACGGGACCCACGGTCGCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: RRRGCSHEACGSCGA*HSGLSGTGPTVASA
Trigger: AGCCGAGGCGACCGTGGGTCCCGTGCCGGACAGCCCGCTGTGTCACGCCCCGCAGCTCCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp GGCTGCGCGCCTGGCTGTCCTTGTCGCCCGCACGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGGGCTGCGCGCTGTGCGGTGGCACCG +
Preference number: 5 (lower is better)
Translates to: GCAPGCPCRPHAPRC*APGTRRAARCAVAP
Trigger: CGGTGCCACCGCACAGCGCGCAGCCCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGTGCGGGCGACAAGGACAGCCAGGCGCGCAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CGTCGGGCGCCGGCTCCACGAAGCAGGCGGTGCGCGCTGCACGAATaGCAGCCTGCACGTCGTCGAAGCGGAAGGCGCAAAGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRAPAPRSRRCALHE*QPARRRSGRRKARP
Trigger: CGGCCGCGCTTTGCGCCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGCGCCCGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp CCGCGCCGCCCGCGCACTGCAAGCCCAGTTGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCACCCGCGCCGCGGGGCAGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PRRPRTASPVGCRTR*ASWRRHPRRGAGRC
Trigger: GCATCTGCCTGCCCCGCGGCGCGGGTGGCGACGCCAAGAAGCTCACCGAGTCCTACATCCAACTGGGCTTGCAGTGCGCGGGCGGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GCCGGCTCCACGAAGCAGGCGGTGCGCGCTGCACGAATGGCAGCCTaGACGTCGTCGAAGCGGAAGGCGCAAAGCGCGGCCGGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: AGSTKQAVRAARMAA*TSSKRKAQSAAGAL
Trigger: CAACGCCCCGGCCGCGCTTTGCGCCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp ACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTGGGCGTaGGCGAGGGGAAACGGCGCTGGATCTCTAGGGCGCCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TRCPPCRPGRSCWWA*ARGNGAGSLGRRPV
Trigger: CACGGGCCGGCGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GTCGAAGCGGAAGGCGCAAAGCGCGGCCGGGGCGTTGCGGGCACCTaGGGCGCCCTGGGGCCTCTCGAAGACAGCGAAGAACTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: VEAEGAKRGRGVAGT*GALGPLEDSEELLA
Trigger: CGCGAGCAGTTCTTCGCTGTCTTCGAGAGGCCCCAGGGCGCCCCAGGTGCCCGCAACGCCCCGGCCGCGCTTTGCGCCTTCCGCTTCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CGGTCGGCGCGGCAGGCGGAAAGCTCACGGCCAGGGCTGAGATGTTaGCCCGGCGCCTCAGCTGGCACAGACCCTGGTAGATGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RSARQAESSRPGLRC*PGASAGTDPGRWSR
Trigger: GCGGCTCCATCTACCAGGGTCTGTGCCAGCTGAGGCGCCGGGGCAACATCTCAGCCCTGGCCGTGAGCTTTCCGCCTGCCGCGCCGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CGCCACCACGTCGGGCGCCGGCTCCACGAAGCAGGCGGTGCGCGCTaGACGAATGGCAGCCTGCACGTCGTCGAAGCGGAAGGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: RHHVGRRLHEAGGAR*TNGSLHVVEAEGAK
Trigger: CTTTGCGCCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGCGCCCGACGTGGTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CCAACACCGCCACCACGTCGGGCGCCGGCTCCACGAAGCAGGCGGTaGGCGCTGCACGAATGGCAGCCTGCACGTCGTCGAAGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PTPPPRRAPAPRSRR*ALHEWQPARRRSGR
Trigger: CCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGCGCCCGACGTGGTGGCGGTGTTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CCGGCTGCAGCTGTATGTTGCGCTTGCTCTCGCAGGCCGGCCCGGTaGCCTGCACCACACTGTCCAACACCGCCACCACGTCGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: PAAAVCCACSRRPAR*PAPHCPTPPPRRAP
Trigger: CGGCGCCCGACGTGGTGGCGGTGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GGCCACAGCCACGGCCGTGAGCCCTGGAGCACGGAACACGGGCGATaGCCTCAGCGGCTGCAGGATGGTCAGTGGGTGCTGCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: GHSHGREPWSTEHGR*PQRLQDGQWVLQVG
Trigger: GCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGGGCTCACGGCCGTGGCTGTGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp TGCAGCTGTATGTTGCGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTaGACCACACTGTCCAACACCGCCACCACGTCGGGCGCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: CSCMLRLLSQAGPVP*TTLSNTATTSGAGS
Trigger: GGAGCCGGCGCCCGACGTGGTGGCGGTGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GCCGTGAGCCCTGGAGCACGGAACACGGGCGATGCCCTCAGCGGCTaGAGGATGGTCAGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCC +
Preference number: 5 (lower is better)
Translates to: AVSPGARNTGDALSG*RMVSGCCRWAAPQS
Trigger: GGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGGGCTCACGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CCAAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAAACGGCGCTGGATCTCTAGGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PSTRCPPCRPGRSCW*AWARGNGAGSLGRR
Trigger: CCGGCGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CCGCCAAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGAAACGGCGCTGGATCTCTAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PPSTRCPPCRPGRSC*WAWARGNGAGSLGR
Trigger: GCGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp GACCCTGGCCCGGGTCCAACTGCAGGATTTTGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGGAGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: DPGPGPTAGFCCSCP*GAAGARTRPAGAAG
Trigger: CCCCGCAGCTCCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCTCACGGACAACTACAACAAAATCCTGCAGTTGGACCCGGGCCAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp CGGTTCTGCGGTCGGCGCGGCAGGCGGAAAGCTCACGGCCAGGGCTaGGATGTTGCCCCGGCGCCTCAGCTGGCACAGACCCTGGTAGAT +
Preference number: 5 (lower is better)
Translates to: RFCGRRGRRKAHGQG*DVAPAPQLAQTLVD
Trigger: ATCTACCAGGGTCTGTGCCAGCTGAGGCGCCGGGGCAACATCTCAGCCCTGGCCGTGAGCTTTCCGCCTGCCGCGCCGACCGCAGAACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTaGAGCTGTATGTTGCGCTTGCTCTCGCAGGCCGGCCCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SGCCRWAAPQSSCSG*SCMLRLLSQAGPVP
Trigger: GGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CGGAACACGGGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTGGGTaGTGCAGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RNTGDALSGCRMVSG*CRWAAPQSSCSGCS
Trigger: GCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CTCGCTGTTGAGCGCCAGGTACGCGTAGGGCTGCGCGCTGTGCGGTaGCACCGCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LAVERQVRVGLRAVR*HRRVQEGTHEAQLV
Trigger: CACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGCGGTGCCACCGCACAGCGCGCAGCCCTACGCGTACCTGGCGCTCAACAGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GTCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCCGCGCCTGGCTGTCCTaGTCGCCCGCACGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: VTGSPWGSAQAAAIHSWCRAWLS*SPARAS
Trigger: CGAGGCGCGTGCGGGCGACAAGGACAGCCAGGCGCG...GCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGGACTCGGTGAGCTTCTaGGCGTCGCCACCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: SRALRGQCPPLLAQQAPLDSVSF*ASPPAP
Trigger: CGGCGCGGGTGGCGACGCCAAGAAGCTCACCGAGTC...CAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTTaGGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTGCACCACACTGT +
Preference number: 5 (lower is better)
Translates to: GGPLRNPVAPAAAVC*ACSRRPARCPAPHC
Trigger: ACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CTGAGATGTTGCCCCGGCGCCTCAGCTGGCACAGACCCTGGTAGATaGAGCCGCACGCGACCACCAGACCCTGGCCCGGGTCCAACTGCA +
Preference number: 5 (lower is better)
Translates to: LRCCPGASAGTDPGR*SRTRPPDPGPGPTA
Trigger: TGCAGTTGGACCCGGGCCAGGGTCTGGTGGTCGCGTGCGGCTCCATCTACCAGGGTCTGTGCCAGCTGAGGCGCCGGGGCAACATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CCCGAGGTAGGCGGCAGCACCAGTCCCACAGTGGACGCGTTGGGGTaGTTGGCGGCCACGTTGAGCATGCTGGGGAACACGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: PEVGGSTSPTVDALG*LAATLSMLGNTVTG
Trigger: ACCGGTCACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCCGCCTACCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp AGCACGGAACACGGGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTaGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: STEHGRCPQRLQDGQ*VLQVGRSAIQLLRL
Trigger: CAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GGCCGTGTAGTTGTTGGCACTGGCCACAGCCACGGCCGTGAGCCCTaGAGCACGGAACACGGGCGATGCCCTCAGCGGCTGCAGGATGGT +
Preference number: 5 (lower is better)
Translates to: GRVVVGTGHSHGREP*STEHGRCPQRLQDG
Trigger: ACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGGGCTCACGGCCGTGGCTGTGGCCAGTGCCAACAACTACACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SRALRGQCPPLLAQQAPLSRAKL*VGVGEG
Trigger: CCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGA...CAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCGGGCACCAGGATGTCTaGGGAGCCACCTGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSGHQDV*GATCGH
Trigger: GTGCCCACAGGTGGCTCCCAAGACATCCTGGTGCCC...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GTTGGTACAGGCGGTTCACTGCCGCCAAGTACACGGTGCCCGCCGTaGCGTCCAGGGCGAAGTTGTTGGTGGGCGTGGGCGAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VGTGGSLPPSTRCPP*RPGRSCWWAWARGN
Trigger: GTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGTGAACCGCCTGTACCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CACTCGACAGTTGGTACAGGCGGTTCACTGCCGCCAAGTACACGGTaGCCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTGGGCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: HSTVGTGGSLPPSTR*PPCRPGRSCWWAWA
Trigger: CGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGTGAACCGCCTGTACCAACTGTCGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AACACGGGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTGGGTGCTaGAGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: NTGDALSGCRMVSGC*RWAAPQSSCSGCSC
Trigger: ACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTTGCGCTTaGTCTCGCAGGCCGGCCCGGTGCCCTGCACCACACTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: PLRNPVAPAAAVCCA*SRRPARCPAPHCPT
Trigger: TGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AGGATGGTCAGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTTaGTCCGGCTGCAGCTGTATGTTGCGCTTGCTCTCGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RMVSGCCRWAAPQSS*SGCSCMLRLLSQAG
Trigger: GCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTGGGTGCTGCAGGTaGGCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTTG +
Preference number: 5 (lower is better)
Translates to: GDALSGCRMVSGCCR*AAPQSSCSGCSCML
Trigger: CAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GGGCAGCGGCTGGGGCCCTCACTGGCACTGGTCCAGAAATGTGGCTaGCTGGAGTTGGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GQRLGPSLALVQKCG*LELVQSCWSVHRVS
Trigger: GGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GGCAGGGCAGCGGCTGGGGCCCTCACTGGCACTGGTCCAGAAATGTaGCTGGCTGGAGTTGGTGCAATCCTGCTGGAGTGTGCACCGGGT +
Preference number: 5 (lower is better)
Translates to: GRAAAGALTGTGPEM*LAGVGAILLECAPG
Trigger: ACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGGCCAGGGCTGAGATGTaGCCCCGGCGCCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QPETVNRQAWSRLSWLAGARAEM*PRRLSW
Trigger: CCAGCTGAGGCGCCGGGGCAACATCTCAGCCCTGGC...CCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCATGGTTGGCGGCCACGTaGAGCATGCTGGGGAACACG +
Preference number: 5 (lower is better)
Translates to: GQCPPLLAQQAPLSVPSPWLAAT*SMLGNT
Trigger: CGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCA...TGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCAGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTGTGGAGTTGAGAACCTaGCAGAACGTGGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GSRALRGQCPPLLAQQAPVELRT*QNVGSR
Trigger: CCGGGAGCCCACGTTCTGCAAGGTTCTCAACTCCAC...AGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CGATCTCGGGCGTGTTCTCGAAGCGGTGGTCTTCTAGGCTACGGTTaGGCGGGAAGAAAGCGCTGCCGAAGCCGGTGTACGTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RSRACSRSGGLLGYG*AGRKRCRSRCTWRP
Trigger: TGGGCGCCACGTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGCCCGAGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp ACCAACCACAGTAGGCATCGGCCGCACCCACGCAGTCCCCGCAGGTaGAGTGTACCTCACACGCTGCCACCTTCACTCGGGCCATCTGGT +
Preference number: 5 (lower is better)
Translates to: TNHSRHRPHPRSPRR*SVPHTLPPSLGPSG
Trigger: ACCAGATGGCCCGAGTGAAGGTGGCAGCGTGTGAGGTACACTCCACCTGCGGGGACTGCGTGGGTGCGGCCGATGCCTACTGTGGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGTTCTGCAGCGTGCCCTaGGTGGACAGCAGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQFCSVP*VDSRRV
Trigger: GACCCGCCTGCTGTCCACCAAGGGCACGCTGCAGAA...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CTGACAGGGCTGCGGCCTGGGCTGATGGCTGTGATGACTGGGTTCTaGATGTACCAGAAGGTGAGGTTTCCGTGCACGCAGCCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: LTGLRPGLMAVMTGF*MYQKVRFPCTQPRL
Trigger: GAGCCGGGGCTGCGTGCACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGTCATCACAGCCATCAGCCCAGGCCGCAGCCCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 90 bp GCGTCCAGGGAGCGGATAGCGATCTCGGGCGTGTTCTCGAAGCGGTaGTCTTCTAGGCTACGGTTGCGCGGGAAGAAAGCGCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: ASRERIAISGVFSKR*SSRLRLRGKKALPK
Trigger: CTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGCCCGAGATCGCTATCCGCTCCCTGGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp AGCGGCTGGGGCCCTCACTGGCACTGGTCCAGAAATGTGGCTGGCTaGAGTTGGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SGWGPHWHWSRNVAG*SWCNPAGVCTGSPE
Trigger: CTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CCGAGGGCAGTACTGTCATGGCAGGGCAGCGGCTGGGGCCCTCACTaGCACTGGTCCAGAAATGTGGCTGGCTGGAGTTGGTGCAATCCT +
Preference number: 5 (lower is better)
Translates to: PRAVLSWQGSGWGPH*HWSRNVAGWSWCNP
Trigger: AGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCCATGACAGTACTGCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GAACCATGGAAGAAGGTGGCTTTAGTCAGGGGCACCAGGATGTCTTaGGAGCCACCTGTGGGCACGGGCGCTAGGGGCGAGGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: EPWKKVALVRGTRMS*EPPVGTGARGEGRI
Trigger: GATCCTGCCCTCGCCCCTAGCGCCCGTGCCCACAGGTGGCTCCCAAGACATCCTGGTGCCCCTGACTAAAGCCACCTTCTTCCATGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GCCGCCACTGACAGGGCTGCGGCCTGGGCTGATGGCTGTGATGACTaGGTTCTGCATGTACCAGAAGGTGAGGTTTCCGTGCACGCAGCC +
Preference number: 5 (lower is better)
Translates to: AATDRAAAWADGCDD*VLHVPEGEVSVHAA
Trigger: GGCTGCGTGCACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGTCATCACAGCCATCAGCCCAGGCCGCAGCCCTGTCAGTGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 90 bp CTGGGCCGACAGTGTTCAGGGATGTTCCACTCTCCCAGCAGTGGGTaGGTTTCCTGTGGCGGGGAGCCACCCTGGGAGTTGAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LGRQCSGMFHSPSSG*VSCGGEPPWELRVF
Trigger: GAAGACCCTCAACTCCCAGGGTGGCTCCCCGCCACAGGAAACCCACCCACTGCTGGGAGAGTGGAACATCCCTGAACACTGTCGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCACCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: EQPETVNRQAWSRLSWLAPSRAK*LVGVGE
Trigger: CTCGCCCACGCCCACCAACAACTTCGCCCTGGACGG...TGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGCCCATCTTCTAGGCTACGGTaGCGCGGGAAGAAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GQCPPLLAQQAPLSVPSPSSRLR*RGKKAL
Trigger: CAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGA...TGGGCTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGTTCCCAGATGAGCTTGGGGTTCTaGGCCGCCGAGGCGTCGATG +
Preference number: 5 (lower is better)
Translates to: KRPVSPTPSPAGSSVSSQMSLGF*AAEASM
Trigger: CATCGACGCCTCGGCGGCCAAGAACCCCAAGCTCAT...CTGGGAACTGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp TCTCCTTCACCTGCGTCAGCGTGTCGGTGTCCATGGCCCGCACGCTaGGGGAGTCCATCCCACAGCCCTGGAAGGACACGTTCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SPSPASACRCPWPAR*GSPSHSPGRTRSSS
Trigger: GGAACTTGAACGTGTCCTTCCAGGGCTGTGGGATGGACTCCCTCAGCGTGCGGGCCATGGACACCGACACGCTGACGCAGGTGAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp TTCCAGGCTCAAGTTGGCACTCGACAGTTGGTACAGGCGGTTCACTaGCGCCAAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTT +
Preference number: 5 (lower is better)
Translates to: FQAQVGTRQLVQAVH*RQVHGARRAVQGEV
Trigger: AACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGTGAACCGCCTGTACCAACTGTCGAGTGCCAACTTGAGCCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GGCACCGCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTGATCTTCAGGATGTTATCGTCCGAC +
Preference number: 5 (lower is better)
Translates to: GTAGCKKARTKPSLC*SLAPCLIFRMLSSD
Trigger: GTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGCGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GGTGGCACCGCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGCTTGATCTTCAGGATGTTATCGTCC +
Preference number: 5 (lower is better)
Translates to: GGTAGCKKARTKPSL*CSLAPCLIFRMLSS
Trigger: GGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGCGGTGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp CCTCTGTGCCTCTGCAGGGTCCAGCAGCTCCTCGGCTGCCTCGTCTaGATATGCCCGGCCATTGATGAAGAAGTCTACAGGCGCCGAAGC +
Preference number: 5 (lower is better)
Translates to: PLCLCRVQQLLGCLV*ICPAIDEEVYRRRS
Trigger: GCTTCGGCGCCTGTAGACTTCTTCATCAATGGCCGGGCATATGCAGACGAGGCAGCCGAGGAGCTGCTGGACCCTGCAGAGGCACAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp TGGGGCCCTCACTGGCACTGGTCCAGAAATGTGGCTGGCTGGAGTTaGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCCAGAGTGCACC +
Preference number: 5 (lower is better)
Translates to: WGPHWHWSRNVAGWS*CNPAGVCTGSPECT
Trigger: GGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GCAGTACTGTCATGGCAGGGCAGCGGCTGGGGCCCTCACTGGCACTaGTCCAGAAATGTGGCTGGCTGGAGTTGGTGCAATCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: AVLSWQGSGWGPHWH*SRNVAGWSWCNPAG
Trigger: TCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCCATGACAGTACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CTCGAAGCGCACACACACAGGCACTGGAGAGGGCAGGGTACCCCCTaGCACAGTGCAGGTGATGCTGGTGGCTGTGCGCGTAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: LEAHTHRHWRGQGTP*HSAGDAGGCARKIC
Trigger: ACAGATCTTACGCGCACAGCCACCAGCATCACCTGCACTGTGCCAGGGGGTACCCTGCCCTCTCCAGTGCCTGTGTGTGTGCGCTTCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 90 bp TCGGTGTCCATGGCCCGCACGCTGAGGGAGTCCATCCCACAGCCCTaGAAGGACACGTTCAAGTTCCGGGGCTTGGCCTCAATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVSMARTLRESIPQP*KDTFKFRGLASMFS
Trigger: GGAGAACATTGAGGCCAAGCCCCGGAACTTGAACGTGTCCTTCCAGGGCTGTGGGATGGACTCCCTCAGCGTGCGGGCCATGGACACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCTCGAAGGTGAAGAGCTaGGCCAAGTCTCCACGCGCG +
Preference number: 5 (lower is better)
Translates to: LSSPATALHPRLPPFPGASKVKS*AKSPRA
Trigger: CGCGCGTGGAGACTTGGCCAAGCTCTTCACCTTCGA...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCTGCGGGCTGTGGGGTaGGCCTCCAGGGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEILRAVG*ASRAAM
Trigger: CATGGCTGCCCTGGAGGCCAACCCCACAGCCCGCAG...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp TGCAGGGGCCCTCTTAGACGACAGCCATCATTCCAAACACAGAGGTaGCCCAGGTCCTCACGGCCCAGGCACTGGGAACAGTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CRGPLRRQPSFQTQR*PRSSRPRHWEQSGL
Trigger: CAGCCCTGACTGTTCCCAGTGCCTGGGCCGTGAGGACCTGGGTCACCTCTGTGTTTGGAATGATGGCTGTCGTCTAAGAGGGCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GGCCCTCACTGGCACTGGTCCAGAAATGTGGCTGGCTGGAGTTGGTaGAATCCTGCTGGAGTGTGCACCGGGTCTCCAGAGTGCACCAAC +
Preference number: 5 (lower is better)
Translates to: GPHWHWSRNVAGWSW*NPAGVCTGSPECTN
Trigger: GTTGGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GTCAGCCAGGGGTTCACAGGCCACACTGCCAATCCACACACCATGTaGCACATCACTGAGCCGACGGCCCAAGTTCCTGCCACGGATGGT +
Preference number: 5 (lower is better)
Translates to: VSQGFTGHTANPHTM*HITEPTAQVPATDG
Trigger: ACCATCCGTGGCAGGAACTTGGGCCGTCGGCTCAGTGATGTGGCACATGGTGTGTGGATTGGCAGTGTGGCCTGTGAACCCCTGGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 90 bp GCAGCAGGGTCTTCTGCCAGTAGCGCTCGGCACGGCGGCTCTTGGTaGAGAAGACGAACAGAGCAACCACAGACAGCAGCAACAGGACAC +
Preference number: 5 (lower is better)
Translates to: AAGSSASSARHGGSW*RRRTEQPQTAATGH
Trigger: GTGTCCTGTTGCTGCTGTCTGTGGTTGCTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCGAGCGCTACTGGCAGAAGACCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CTGTGTAGTCCCGGTGCACATCAATCTCCGAGGGCAGTACTGTCATaGCAGGGCAGCGGCTGGGGCCCTCACTGGCACTGGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LCSPGAHQSPRAVLS*QGSGWGPHWHWSRN
Trigger: ATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCCATGACAGTACTGCCCTCGGAGATTGATGTGCACCGGGACTACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CGTTCACCGTTACCACGTCTGAGAAGGCCCCTGCGGCAGGCCCTGTaGCACACACGATCTCCTCTGAAACGGTGTATCTGTCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSPLPRLRRPLRQAL*HTRSPLKRCICQPG
Trigger: CCCTGGCTGACAGATACACCGTTTCAGAGGAGATCGTGTGTGCCACAGGGCCTGCCGCAGGGGCCTTCTCAGACGTGGTAACGGTGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS-3UTR CAA 90 bp AGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGCGCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: RDTDNCLVAEAEIPSARWRTKPS*CCSLAP
Trigger: GGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCG...CCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTCCTGGCTCTTCTGGGTaGTGTGCAGCACCACTTGGT +
Preference number: 5 (lower is better)
Translates to: PFCGQWALPMLPLANETAPGSSG*CAAPLG
Trigger: ACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGG...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GTCCCCCTCTCTCCACCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGTGCCCAGCGACTCATaGACTGAGCAGTGGATGACT +
Preference number: 5 (lower is better)
Translates to: VPLSPPFCGQWALPMLPLVPSDS*TEQWMT
Trigger: AGTCATCCACTGCTCAGTCAATGAGTCGCTGGGCAC...CAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGGTGGAGAGAGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AGCCGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGCGAGTCACGAAGTGCTaGTACTCCAAGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: SRALRGQCPPLLAQQAPLRVTKC*YSKKGM
Trigger: CATCCCCTTCTTGGAGTACAAGCACTTCGTGACTCG...CAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp TTCACCAGGACCTGGAGCATAGAGCCCACGTTGAGGTCACTGCCGTaGATGGTGATCCTTGTACCCCCGGCCTTTGGGCCCATGGAAGGC +
Preference number: 5 (lower is better)
Translates to: FTRTWSIEPTLRSLP*MVILVPPAFGPMEG
Trigger: GCCTTCCATGGGCCCAAAGGCCGGGGGTACAAGGATCACCATTCACGGCAGTGACCTCAACGTGGGCTCTATGCTCCAGGTCCTGGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp TCCAGAAATGTGGCTGGCTGGAGTTGGTGCAATCCTGCTGGAGTGTaGACCGGGTCTCCAGAGTGCACCAACCACAGTAGGCATCGGCCG +
Preference number: 5 (lower is better)
Translates to: SRNVAGWSWCNPAGV*TGSPECTNHSRHRP
Trigger: CGGCCGATGCCTACTGTGGTTGGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp GCTGTGATGACTGGGTTCTGCATGTACCAGAAGGTGAGGTTTCCGTaGACGCAGCCCCGGCTCTCGAAGCGCACACACACAGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: AVMTGFCMYQKVRFP*TQPRLSKRTHTGTG
Trigger: TCCAGTGCCTGTGTGTGTGCGCTTCGAGAGCCGGGGCTGCGTGCACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGTCATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 90 bp TGCCTCTGCAGGGTCCAGCAGCTCCTCGGCTGCCTCGTCTGCATATaGCCGGCCATTGATGAAGAAGTCTACAGGCGCCGAAGCATTGCT +
Preference number: 5 (lower is better)
Translates to: CLCRVQQLLGCLVCI*PAIDEEVYRRRSIA
Trigger: AGCAATGCTTCGGCGCCTGTAGACTTCTTCATCAATGGCCGGGCATATGCAGACGAGGCAGCCGAGGAGCTGCTGGACCCTGCAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp TCTGCAGCAGGGTCTTCTGCCAGTAGCGCTCGGCACGGCGGCTCTTaGTGCAGAAGACGAACAGAGCAACCACAGACAGCAGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: SAAGSSASSARHGGS*CRRRTEQPQTAATG
Trigger: TCCTGTTGCTGCTGTCTGTGGTTGCTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCGAGCGCTACTGGCAGAAGACCCTGCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGASLCCS*APCLIF
Trigger: GAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CGGGCACTAAGAGGCCAGTGTCCCCCACTCCTAGCCCAGCAGGCTCCTCTGTCAGCATATGCCCGGCCATaGATGAAGAAGTCTACAGGC +
Preference number: 5 (lower is better)
Translates to: RALRGQCPPLLAQQAPLSAYARP*MKKSTG
Trigger: GCCTGTAGACTTCTTCATCAATGGCCGGGCATATGC...TGACAGAGGAGCCTGCTGGGCTAGGAGTGGGGGACACTGGCCTCTTAGTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCATGAGGAAGTGCTTGTaGTTGAGCAGTGAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSMRKCL*LSSEEN
Trigger: GTTCTCCTCACTGCTCAACAACAAGCACTTCCTCAT...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CCCCAGGGGACAAGGCCAAGAGCTCGGCAGCCGGGCACTAAGAGGCCAGTGTCCGAGCGGCGTCATGTCTaGGATCTGTTTATAATAGCG +
Preference number: 5 (lower is better)
Translates to: PQGTRPRARQPGTKRPVSERRHV*DLFIIA
Trigger: CGCTATTATAAACAGATCCAAGACATGACGCCGCTC...GGACACTGGCCTCTTAGTGCCCGGCTGCCGAGCTCTTGGCCTTGTCCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp GTTCACAGGCCACACTGCCAATCCACACACCATGTGCCACATCACTaGGCCGACGGCCCAAGTTCCTGCCACGGATGGTCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: VHRPHCQSTHHVPHH*ADGPSSCHGWSAKS
Trigger: GGACTTTGCTGACCATCCGTGGCAGGAACTTGGGCCGTCGGCTCAGTGATGTGGCACATGGTGTGTGGATTGGCAGTGTGGCCTGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 90 bp AGCAGGGACGCCAGGCTGCACCTGTCACGCACTGCGAAGTCCTTCTaGTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SRDARLHLSRTAKSF*CSRAWTKTMRKCLL
Trigger: CAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAGCCTGGCGTCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CGGTCACGTGGTCCTGGCCAGCAGGAAAGGATGGAAACTGGGCCCTaGGCAGGAGATTGCAGTAGGCAATCTGATGATCATAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RSRGPGQQERMETGP*AGDCSRQSDDHRQG
Trigger: GCCCTGCCTATGATCATCAGATTGCCTACTGCAATCTCCTGCCCAGGGCCCAGTTTCCATCCTTTCCTGCTGGCCAGGACCACGTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GCAGCTGGATGCACCAGGAGCAAGGCCACTGTGTGGACAGGCAGCTaGTACAGGCTGTATGGGGGTAGACTTGTCCAATTCGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AAGCTRSKATVWTGS*YRLYGGRLVQFGCS
Trigger: ACTGCAGCCGAATTGGACAAGTCTACCCCCATACAGCCTGTACCAGCTGCCTGTCCACACAGTGGCCTTGCTCCTGGTGCATCCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CCTGAGGACTCGTGGGGTTTGGCGAGTCCTGGCACTGAGACTGGTTaGAGACACATGAATGCAGCTGGATGCACCAGGAGCAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: PEDSWGLASPGTETG*RHMNAAGCTRSKAT
Trigger: AGTGGCCTTGCTCCTGGTGCATCCAGCTGCATTCATGTGTCTCCAACCAGTCTCAGTGCCAGGACTCGCCAAACCCCACGAGTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAATCCACTTCTCCCTCTaGGCTGTGGAGAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGAIHFSL*AVENCG
Trigger: CCCACAGTTCTCCACAGCCAAGAGGGAGAAGTGGAT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTTGGTGGGTGAGTCCTaGCCCAGCTGCAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNLVGES*PSCRSE
Trigger: CTCTGACCTGCAGCTGGGCAAGGACTCACCCACCAA...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp GTAGTGGGCCAGTGTGTTCAGTTTCTTACGGCCGTCCTCCACCACTaGTGTGTCATCCAGGTCCCGGAGGACGTAGCTCTGGGTACTCGA +
Preference number: 5 (lower is better)
Translates to: VVGQCVQFLTAVLHH*CVIQVPEDVALGTR
Trigger: TCGAGTACCCAGAGCTACGTCCTCCGGGACCTGGATGACACATCAGTGGTGGAGGACGGCCGTAAGAAACTGAACACACTGGCCCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AACGTGGGCTCCCGGCCAATGTGGTGTACAGCCATTGATACATTCTaGACCATGTGGAAGCGTTCGCCAGCCACAGTGATGGTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: NVGSRPMWCTAIDTF*TMWKRSPATVMVLP
Trigger: CGGCAGGACCATCACTGTGGCTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGAGCCCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 90 bp AGGGACGCCAGGCTGCACCTGTCACGCACTGCGAAGTCCTTCTGCTaGTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: RDARLHLSRTAKSFC*SRAWTKTMRKCLLL
Trigger: CAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAGCCTGGCGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp TTGTTTTCCATCAGAGCCACCACCTGTTCAAACTTGTGCTGTAGCTaGGTCCTGCGGGCTGTGGGGTTGGCCTCCAGGGCAGCCATGATC +
Preference number: 5 (lower is better)
Translates to: LFSIRATTCSNLCCS*VLRAVGLASRAAMI
Trigger: GATCATGGCTGCCCTGGAGGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAACAGGTGGTGGCTCTGATGGAAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGTGTGGCTGGCTGGAGTaGGTGCAATCCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSCGWLE*VQSCWS
Trigger: ACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACA...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AGCAGAAATTCCCTCTGCCAGGTGGATGAGGTAGTGTTCTGGGATATGGCCACCTTGTACCCCCGGCCTTaGGGCCCATGGAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SRNSLCQVDEVVFWDMATLYPRP*GPWKAP
Trigger: TGGAGCCTTCCATGGGCCCAAAGGCCGGGGGTACAA...GGTGGCCATATCCCAGAACACTACCTCATCCACCTGGCAGAGGGAATTTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp AGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTACAGGCGCCGAAGCATaGCTCAGGGCTCCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RQAWSRLSWLAGKVLLGTTGAEA*LRAPGD
Trigger: ATCTCCTGGAGCCCTGAGCAATGCTTCGGCGCCTGT...AGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTTCGGCACGGCGGCTCTaGGTGCAGAAGACGAACAGA +
Preference number: 5 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEISARRL*VQKTNR
Trigger: TCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCGA...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GCTGAGCAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGCTGCGGTTCAGCTCCTaGGTGAGATCCGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: AEQPETVNRQAWSRLSWLLRFSS*VRSVMS
Trigger: AGACATGACGGATCTCACCAAGGAGCTGAACCGCAG...CAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCACGATGAGGAAGTGCTaGTTGTTGAGCAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSSPATALHPRLPPFPGATMRKC*LLSSEE
Trigger: CTCCTCACTGCTCAACAACAAGCACTTCCTCATCGT...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CTGAGTAGTCCAGCTACAGCCCTGCATCCTCGCCTTCCTCCCTTTCCTGGGGCCTTGTTGATCTGCTGCTaGATGGCACACAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSSPATALHPRLPPFPGALLICC*MAHNSR
Trigger: CCTGCTGTTGTGTGCCATCAAGCAGCAGATCAACAA...GGCCCCAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACGCGTCGATGGAGCCTTaGTTGATCTGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GNGHCPCCHWPMRRLTADASMEP*LICCLM
Trigger: CATCAAGCAGCAGATCAACAAAGGCTCCATCGACGC...GTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TCACCGGGAGCCCCTGGGGATCTGCACAAGCGGCAGCTATTCACAGTTGGTGCAAGGGTACTGTCCTTCTaGTCTGTGAGGCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: SPGAPGDLHKRQLFTVGARVLSF*SVRLMA
Trigger: AGCCATGAGCCTCACAGACAAGAAGGACAGTACCCT...TGCACCAACTGTGAATAGCTGCCGCTTGTGCAGATCCCCAGGGGCTCCCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATCGCGCAGGGGAAGGCTGTaGGTCTTCCAGATATGCAGG +
Preference number: 5 (lower is better)
Translates to: VQAVLVGRESLIRDWQRSRRGRL*VFQICR
Trigger: CCTGCATATCTGGAAGACCAACAGCCTTCCCCTGCG...CGATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AAGAAGGCACGCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTaGTTGATCTTCAGGATGTTATCGTCCGACGGGTTAAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KKARTKPSLCCSLAP*LIFRMLSSDGLRSK
Trigger: CTTCGACCTTAACCCGTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp GGCGGCCCCTTCAGCTTCAGACTCAGTGGAAATACCTGGCTCTTCTaGGTTGTGTGCAGCACCACTTGGTTGCAGCGGACCAGTGAGTTA +
Preference number: 5 (lower is better)
Translates to: GGPFSFRLSGNTWLF*VVCSTTWLQRTSEL
Trigger: TAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATTTCCACTGAGTCTGAAGCTGAAGGGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp TCCCGGCCAATGTGGTGTACAGCCATTGATACATTCTGCACCATGTaGAAGCGTTCGCCAGCCACAGTGATGGTCCTGCCGCCACTGACA +
Preference number: 5 (lower is better)
Translates to: SRPMWCTAIDTFCTM*KRSPATVMVLPPLT
Trigger: TGTCAGTGGCGGCAGGACCATCACTGTGGCTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 90 bp GGCAGCTGTCCTTCAGCCGTGCCCAGCGACTCATTGACTGAGCAGTaGATGACTCTGTCTGAGATGATTTGGATGTCGCAGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: GSCPSAVPSDSLTEQ*MTLSEMIWMSQDTW
Trigger: CCAGGTGTCCTGCGACATCCAAATCATCTCAGACAGAGTCATCCACTGCTCAGTCAATGAGTCGCTGGGCACGGCTGAAGGACAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCCCCACAGTGGACGCGTaGGGGTGGTTGGCGGCCACG +
Preference number: 5 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPPTVDA*GWLAAT
Trigger: CGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGG...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGCCCCCTCTGGATGAGGGACACAGACAACTGCTTGGTGGCTGAAGCAGAAATTGCACTGCAAGCCCAGTaGGATGTAGGACTCGGTGAG +
Preference number: 5 (lower is better)
Translates to: GPLWMRDTDNCLVAEAEIALQAQ*DVGLGE
Trigger: CTCACCGAGTCCTACATCCAACTGGGCTTGCAGTGC...AATTTCTGCTTCAGCCACCAAGCAGTTGTCTGTGTCCCTCATCCAGAGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp ACAGACAACTGCTTGGTGGCTGAAGCAGAAATTCCCTCTGCCAGGTGGATGAGGTCGTTCAGGCTGATCTaGAGGAGCCTCCCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: TDNCLVAEAEIPSARWMRSFRLI*RSLPVA
Trigger: CGCCACAGGGAGGCTCCTCAAGATCAGCCTGAACGA...CCTCATCCACCTGGCAGAGGGAATTTCTGCTTCAGCCACCAAGCAGTTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CAGCCTGAAACAGTGAACAGGCAGGCATGGTCCAGGCTGTCCTGGTTGGCAGGGAGGAAGTGCTTGTTGTaGAGCAGTGAGGAGAACAGG +
Preference number: 5 (lower is better)
Translates to: QPETVNRQAWSRLSWLAGRKCLL*SSEENR
Trigger: CCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCT...CCCTGCCAACCAGGACAGCCTGGACCATGCCTGCCTGTTCACTGTTTCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp CTGTCTTGCTCCTTATGGATGACGAGGGTGAGCGGCTCTCCTGGGTaGTGTTTGATCCACTTCTCCCTCTTGGCTGTGGAGAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSCSLWMTRVSGSPG*CLIHFSLLAVENCG
Trigger: CCCACAGTTCTCCACAGCCAAGAGGGAGAAGTGGATCAAACATCACCCAGGAGAGCCGCTCACCCTCGTCATCCATAAGGAGCAAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp TCAAAGCTCTCTTCCAGCCCAAAGCTGCACTCGAGGGAGGAACCATaGAAGAAGGTGGCTTTAGTCAGGGGCACCAGGATGTCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SKLSSSPKLHSREEP*KKVALVRGTRMSWE
Trigger: CTCCCAAGACATCCTGGTGCCCCTGACTAAAGCCACCTTCTTCCATGGTTCCTCCCTCGAGTGCAGCTTTGGGCTGGAAGAGAGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CAGGCTGTCTTGCTCCTTATGGATGACGAGGGTGAGCGGCTCTCCTaGGTGATGTTTGATCCACTTCTCCCTCTTGGCTGTGGAGAACTG +
Preference number: 5 (lower is better)
Translates to: QAVLLLMDDEGERLS*VMFDPLLPLGCGEL
Trigger: CAGTTCTCCACAGCCAAGAGGGAGAAGTGGATCAAACATCACCCAGGAGAGCCGCTCACCCTCGTCATCCATAAGGAGCAAGACAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CTGCACCTGTCACGCACTGCGAAGTCCTTCTGCTGCTCCAGAGCATaGACGAAGACGATGAGGAAGTGCTTGTTGTTGAGCAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LHLSRTAKSFCCSRA*TKTMRKCLLLSSEE
Trigger: CTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TGCCCATGCTGCCACTGGCCAATGAGACGGCTAACAGCTGACCTGGTTTGGAACTGTATGGGGGTAGACTaGTCCAATTCGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: CPCCHWPMRRLTADLVWNCMGVD*SNSAAV
Trigger: GACTGCAGCCGAATTGGACAAGTCTACCCCCATACA...GTTCCAAACCAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATGTGGCGATGGTCTGGTaGAAGTTCCCCACCTGGATT +
Preference number: 5 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDVAMVW*KFPTWI
Trigger: AATCCAGGTGGGGAACTTCAACCAGACCATCGCCAC...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp GCTCTTCTGGGTTGTGTGCAGCACCACTTGGTTGCAGCGGACCAGTaGGTTATTCGCCCATACAGCCTCAAAGCTCTCTTCCAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: ALLGCVQHHLVAADQ*VIRPYSLKALFQPK
Trigger: TTTGGGCTGGAAGAGAGCTTTGAGGCTGTATGGGCGAATAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 90 bp AAGTCCTTCTGCTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTaGTTGTTGTTGAGCAGTGAGGAGAACAGGCTGATCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KSFCCSRAWTKTMRK*LLLSSEENRLIPSS
Trigger: GGAGGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp ATTTGGATGTCGCAGGACACCTGGCCAATCTTGATGTGGTACTCATaGCTCTCCAGCCCCAGGCTGTCTTGCTCCTTATGGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: IWMSQDTWPILMWYS*LSSPRLSCSLWMTR
Trigger: CCTCGTCATCCATAAGGAGCAAGACAGCCTGGGGCTGGAGAGCCATGAGTACCACATCAAGATTGGCCAGGTGTCCTGCGACATCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp CAGTGGATGACTCTGTCTGAGATGATTTGGATGTCGCAGGACACCTaGCCAATCTTGATGTGGTACTCATGGCTCTCCAGCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QWMTLSEMIWMSQDT*PILMWYSWLSSPRL
Trigger: CAGCCTGGGGCTGGAGAGCCATGAGTACCACATCAAGATTGGCCAGGTGTCCTGCGACATCCAAATCATCTCAGACAGAGTCATCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp CCGTTCTGTGGGCAATGGGCACTGCCCATGCTGCCACTGGCCAATGAGACGGCTATGGCCACGTTTGTGTaGAACTCATTCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: PFCGQWALPMLPLANETAMATFV*NSFWYF
Trigger: GAAATACCAGAATGAGTTCAACACAAACGTGGCCAT...AGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCCCATTGCCCACAGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp ATGTCATCAGGTATAGGTAACCAGGATCCATGGGGTCAAACTGCATaGCGTGATGCACAGGCTCCCCATAGGCTACAGTCAGCACTCGCC +
Preference number: 5 (lower is better)
Translates to: MSSGIGNQDPWGQTA*RDAQAPHRLQSALA
Trigger: GGCGAGTGCTGACTGTAGCCTATGGGGAGCCTGTGCATCACGTCATGCAGTTTGACCCCATGGATCCTGGTTACCTATACCTGATGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp CCGTTCGAACGCCATTTCCATAGTCACAAGCCATCTCCATGCCGCTaGGGCTGGGCAGGCTTCCTGAGATCTGTAAGATCATACCTGTGT +
Preference number: 5 (lower is better)
Translates to: PFERHFHSHKPSPCR*GWAGFLRSVRSYLC
Trigger: ACACAGGTATGATCTTACAGATCTCAGGAAGCCTGCCCAGCCTCAGCGGCATGGAGATGGCTTGTGACTATGGAAATGGCGTTCGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 90 bp ATTTCCGAGACTCCTCGGCCAGGTGTGCGTTCATTTCCTGCTCGCTaGGCGGCGTCATGTCTTGGATCTGTTTATAATAGCGCTGTACGG +
Preference number: 5 (lower is better)
Translates to: ISETPRPGVRSFPAR*AASCLGSVYNSAVR
Trigger: CCGTACAGCGCTATTATAAACAGATCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGAACGCACACCTGGCCGAGGAGTCTCGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp AGTGTGGAGTTGAGAACCTTGCAGAACGTGGGCTCCCGGCCAATGTaGTGTACAGCCATTGATACATTCTGCACCATGTGGAAGCGTTCG +
Preference number: 5 (lower is better)
Translates to: SVELRTLQNVGSRPM*CTAIDTFCTMWKRS
Trigger: CGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGAGCCCACGTTCTGCAAGGTTCTCAACTCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 90 bp TTCAGCTTCAGACTCAGTGGAAATACCTGGCTCTTCTGGGTTGTGTaGAGCACCACTTGGTTGCAGCGGACCAGTGAGTTATTCGCCCAT +
Preference number: 5 (lower is better)
Translates to: FSFRLSGNTWLFWVV*STTWLQRTSELFAH
Trigger: ATGGGCGAATAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATTTCCACTGAGTCTGAAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp GGGACAGATGAGTATTTTCTGTCCCCTGGAACAGTCATTTCCAGTGTGTCACCGTCCTTGGCGCCCTGCTaGATCTTCAGGATGTTATCG +
Preference number: 5 (lower is better)
Translates to: GTDEYFLSPGTVISSVSPSLAPC*IFRMLS
Trigger: CGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGA...CGGTGACACACTGGAAATGACTGTTCCAGGGGACAGAAAATACTCATCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TGGTCCAGGCTGTCCTGGTTGGCAGGGAAAGTCTTATTAGGGACTGGCAGCGATTGTGGTGTACAGCCATaGATACATTCTGCACCATGT +
Preference number: 5 (lower is better)
Translates to: WSRLSWLAGKVLLGTGSDCGVQP*IHSAPC
Trigger: ACATGGTGCAGAATGTATCAATGGCTGTACACCACA...ATCGCTGCCAGTCCCTAATAAGACTTTCCCTGCCAACCAGGACAGCCTGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 90 bp AGCGACTCATTGACTGAGCAGTGGATGACTCTGTCTGAGATGATTTaGATGTCGCAGGACACCTGGCCAATCTTGATGTGGTACTCATGG +
Preference number: 5 (lower is better)
Translates to: SDSLTEQWMTLSEMI*MSQDTWPILMWYSW
Trigger: CCATGAGTACCACATCAAGATTGGCCAGGTGTCCTGCGACATCCAAATCATCTCAGACAGAGTCATCCACTGCTCAGTCAATGAGTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS-3UTR CAA 90 bp TTTTCCCGGCAGGCTTTTATTATAAAGAATGTTCCAGAGAGTCCCAGCCTTCCCTTCGCGTACAGAAGCTaGTTGGTGGGTGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSRQAFIIKNVPESPSLPFAYRS*LVGESL
Trigger: CAAGGACTCACCCACCAACAAGCTTCTGTACGCGAA...GGGAAGGCTGGGACTCTCTGGAACATTCTTTATAATAAAAGCCTGCCGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CCGCGCCGCGGGGCAGGCAGATGCGCGCCAGCAGGCTaGGCGCCTGGCTGTCCTTGTCGCCCGCACGCGCCT +
Preference number: 6 (lower is better)
Translates to: PRRGAGRCAPAG*APGCPCRPHAP
Trigger: AGGCGCGTGCGGGCGACAAGGACAGCCAGGCGCGCAGCCTGCTGGCGCGCATCTGCCTGCCCCGCGGCGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp GGGTGCTCGCACGAGGCCTGCGGGAGCTGCGGGGCGTaGCACAGCGGGCTGTCCGGCACGGGACCCACGGTC +
Preference number: 6 (lower is better)
Translates to: GCSHEACGSCGA*HSGLSGTGPTV
Trigger: GACCGTGGGTCCCGTGCCGGACAGCCCGCTGTGTCACGCCCCGCAGCTCCCGCAGGCCTCGTGCGAGCACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CGGGGCAGGCAGATGCGCGCCAGCAGGCTGCGCGCCTaGCTGTCCTTGTCGCCCGCACGCGCCTCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RGRQMRASRLRA*LSLSPARASLL
Trigger: CAACAGCGAGGCGCGTGCGGGCGACAAGGACAGCCAGGCGCGCAGCCTGCTGGCGCGCATCTGCCTGCCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp AGCGCGGCCGGGGCGTTGCGGGCACCTGGGGCGCCCTaGGGCCTCTCGAAGACAGCGAAGAACTGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: SAAGALRAPGAP*GLSKTAKNCSR
Trigger: GCGCGAGCAGTTCTTCGCTGTCTTCGAGAGGCCCCAGGGCGCCCCAGGTGCCCGCAACGCCCCGGCCGCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TGCGCGGGAAGAAAGCGCTGCCGAAGCCGGTGTACGTaGCGCCCACGAGCAGACGGCTGCCCCCGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: CAGRKRCRSRCT*RPRADGCPRCP
Trigger: CGGGCACCGGGGGCAGCCGTCTGCTCGTGGGCGCCACGTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp CAGATGCGCGCCAGCAGGCTGCGCGCCTGGCTGTCCTaGTCGCCCGCACGCGCCTCGCTGTTGAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: QMRASRLRAWLS*SPARASLLSAR
Trigger: CCTGGCGCTCAACAGCGAGGCGCGTGCGGGCGACAAGGACAGCCAGGCGCGCAGCCTGCTGGCGCGCATCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp GGTCGGCGCGGCAGGCGGAAAGCTCACGGCCAGGGCTaGGATGTTGCCCCGGCGCCTCAGCTGGCACAGACC +
Preference number: 6 (lower is better)
Translates to: GRRGRRKAHGQG*DVAPAPQLAQT
Trigger: GGTCTGTGCCAGCTGAGGCGCCGGGGCAACATCTCAGCCCTGGCCGTGAGCTTTCCGCCTGCCGCGCCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCTGGCTGTCCTTGTCGCCCGCACGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGGGCTGCGCGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: PGCPCRPHAPRC*APGTRRAARCA
Trigger: CGCACAGCGCGCAGCCCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGTGCGGGCGACAAGGACAGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CCACCACGTCGGGCGCCGGCTCCACGAAGCAGGCGGTaGGCGCTGCACGAATGGCAGCCTGCACGTCGTCGA +
Preference number: 6 (lower is better)
Translates to: PPRRAPAPRSRR*ALHEWQPARRR
Trigger: TCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGCGCCCGACGTGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp AAGTTGTTGGTGGGCGTGGGCGAGGGGAAACGGCGCTaGATCTCTAGGGCGCCGGCCCGTGCCGCCCCGAGC +
Preference number: 6 (lower is better)
Translates to: KLLVGVGEGKRR*ISRAPARAAPS
Trigger: GCTCGGGGCGGCACGGGCCGGCGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TGCCCCGGCGCCTCAGCTGGCACAGACCCTGGTAGATaGAGCCGCACGCGACCACCAGACCCTGGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: CPGASAGTDPGR*SRTRPPDPGPG
Trigger: ACCCGGGCCAGGGTCTGGTGGTCGCGTGCGGCTCCATCTACCAGGGTCTGTGCCAGCTGAGGCGCCGGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GAGCGCCAGGTACGCGTAGGGCTGCGCGCTGTGCGGTaGCACCGCCGGGTGCAAGAAGGCACGCACGAAGCC +
Preference number: 6 (lower is better)
Translates to: ERQVRVGLRAVR*HRRVQEGTHEA
Trigger: GGCTTCGTGCGTGCCTTCTTGCACCCGGCGGTGCCACCGCACAGCGCGCAGCCCTACGCGTACCTGGCGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GGCGGTTCACTGCCGCCAAGTACACGGTGCCCGCCGTaGCGTCCAGGGCGAAGTTGTTGGTGGGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GGSLPPSTRCPP*RPGRSCWWAWA
Trigger: CGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGTGAACCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GTCGGGCGCCGGCTCCACGAAGCAGGCGGTGCGCGCTaGACGAATGGCAGCCTGCACGTCGTCGAAGCGGAA +
Preference number: 6 (lower is better)
Translates to: VGRRLHEAGGAR*TNGSLHVVEAE
Trigger: TTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGGCGCCCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTGGGCGTaGGCGAGGGGAAACGGCGCTGGATCTCTAGGGCGC +
Preference number: 6 (lower is better)
Translates to: PPCRPGRSCWWA*ARGNGAGSLGR
Trigger: GCGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GCCGCCAAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGGAAACGGCGCTGGATCTCTAGGGCG +
Preference number: 6 (lower is better)
Translates to: AAKYTVPAVPSRAKL*VGVGEGKRRWISRA
Trigger: CGCCCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp CCGGTGCCCGAGGTAGGCGGCAGCACCAGTCCCACAGTGGACGCGTaGGGGTGGTTGGCGGCCACGTTGAGCATGCTGGGGAACACGGTG +
Preference number: 6 (lower is better)
Translates to: PVPEVGGSTSPTVDA*GWLAATLSMLGNTV
Trigger: CACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCCGCCTACCTCGGGCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCGCGCACTGCAAGCCCAGTTGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCACCCGCGCCGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: PRTASPVGCRTR*ASWRRHPRRGA
Trigger: TGCCCCGCGGCGCGGGTGGCGACGCCAAGAAGCTCACCGAGTCCTACATCCAACTGGGCTTGCAGTGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp ACGAAGCAGGCGGTGCGCGCTGCACGAATGGCAGCCTaGACGTCGTCGAAGCGGAAGGCGCAAAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: TKQAVRAARMAA*TSSKRKAQSAA
Trigger: GGCCGCGCTTTGCGCCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp ATGTTGCGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTaGACCACACTGTCCAACACCGCCACCACGTCGGGC +
Preference number: 6 (lower is better)
Translates to: MLRLLSQAGPVP*TTLSNTATTSG
Trigger: GCCCGACGTGGTGGCGGTGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CCTGGAGCACGGAACACGGGCGATGCCCTCAGCGGCTaGAGGATGGTCAGTGGGTGCTGCAGGTGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: PGARNTGDALSG*RMVSGCCRWAA
Trigger: AGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CACGGCCGTGAGCCCTGGAGCACGGAACACGGGCGATaGCCTCAGCGGCTGCAGGATGGTCAGTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: HGREPWSTEHGR*PQRLQDGQWVL
Trigger: CAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGGGCTCACGGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAAACGGCGCTGGATCTCTA +
Preference number: 6 (lower is better)
Translates to: RCPPCRPGRSCW*AWARGNGAGSL
Trigger: TAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp ACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGAAACGGCGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: TRCPPCRPGRSC*WAWARGNGAGS
Trigger: AGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GTTGTTGGCACTGGCCACAGCCACGGCCGTGAGCCCTaGAGCACGGAACACGGGCGATGCCCTCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: VVGTGHSHGREP*STEHGRCPQRL
Trigger: CAGCCGCTGAGGGCATCGCCCGTGTTCCGTGCTCCAGGGCTCACGGCCGTGGCTGTGGCCAGTGCCAACAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGGAAACGGCGCTGGATC +
Preference number: 6 (lower is better)
Translates to: YTVPAVPSRAKL*VGVGEGKRRWI
Trigger: GATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAGGGGAAACGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: KYTVPAVPSRAK*LVGVGEGKRRW
Trigger: CCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp ACTGCCGCCAAGTACACGGTGCCCGCCGTGCCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAGGGGAAACGGCGCTGGATCTCTAGG +
Preference number: 6 (lower is better)
Translates to: TAAKYTVPAVPSRAK*LVGVGEGKRRWISR
Trigger: CCTAGAGATCCAGCGCCGTTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp AGCACCAGTCCCACAGTGGACGCGTTGGGGTGGTTGGCGGCCACGTaGAGCATGCTGGGGAACACGGTGACCGGTTCTGCGGTCGGCGCG +
Preference number: 6 (lower is better)
Translates to: STSPTVDALGWLAAT*SMLGNTVTGSAVGA
Trigger: CGCGCCGACCGCAGAACCGGTCACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp AGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTaGCGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTGCACCACACTG +
Preference number: 6 (lower is better)
Translates to: RWAAPQSSCSGCSCM*RLLSQAGPVPCTTL
Trigger: CAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CACGTTGAGCATGCTGGGGAACACGGTGACCGGTTCTaGGGTCGGCGCGGCAGGCGGAAAGCTCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: HVEHAGEHGDRF*GRRGRRKAHGQ
Trigger: CTGGCCGTGAGCTTTCCGCCTGCCGCGCCGACCGCAGAACCGGTCACCGTGTTCCCCAGCATGCTCAACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GATGCCCTCAGCGGCTGCAGGATGGTCAGTGGGTGCTaGAGGTGGGCCGCTCCGCAATCCAGTTGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: DALSGCRMVSGC*RWAAPQSSCSG
Trigger: GCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTGGGTaGTGCAGGTGGGCCGCTCCGCAATCCAGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: GDALSGCRMVSG*CRWAAPQSSCS
Trigger: GGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GGCGGCAGCACCAGTCCCACAGTGGACGCGTTGGGGTaGTTGGCGGCCACGTTGAGCATGCTGGGGAACACG +
Preference number: 6 (lower is better)
Translates to: GGSTSPTVDALG*LAATLSMLGNT
Trigger: CGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CCGGCTCCACGAAGCAGGCGGTGCGCGCTGCACGAATaGCAGCCTGCACGTCGTCGAAGCGGAAGGCGCAAA +
Preference number: 6 (lower is better)
Translates to: PAPRSRRCALHE*QPARRRSGRRK
Trigger: TTTGCGCCTTCCGCTTCGACGACGTGCAGGCTGCCATTCGTGCAGCGCGCACCGCCTGCTTCGTGGAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CACGGGCGATGCCCTCAGCGGCTGCAGGATGGTCAGTaGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTTG +
Preference number: 6 (lower is better)
Translates to: HGRCPQRLQDGQ*VLQVGRSAIQL
Trigger: CAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTGCAGCCGCTGAGGGCATCGCCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GAGGTAGGCGGCAGCACCAGTCCCACAGTGGACGCGTaGGGGTGGTTGGCGGCCACGTTGAGCATGCTGGGG +
Preference number: 6 (lower is better)
Translates to: EVGGSTSPTVDA*GWLAATLSMLG
Trigger: CCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCCGCCTACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTaGCGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: APQSSCSGCSCM*RLLSQAGPVPC
Trigger: GCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GCCGCTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTTGCGCTaGCTCTCGCAGGCCGGCCCGGTGCCCTGCACCACACTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: AAPQSSCSGCSCMLR*LSQAGPVPCTTLSN
Trigger: GTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GCTGTATGTTGCGCTTGCTCTCGCAGGCCGGCCCGGTaGCCTGCACCACACTGTCCAACACCGCCACCACGT +
Preference number: 6 (lower is better)
Translates to: AVCCACSRRPAR*PAPHCPTPPPR
Trigger: ACGTGGTGGCGGTGTTGGACAGTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CTCCGCAATCCAGTTGCTCCGGCTGCAGCTGTATGTTaGGCTTGCTCTCGCAGGCCGGCCCGGTGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: LRNPVAPAAAVC*ACSRRPARCPA
Trigger: TGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp AGTAGGCATCGGCCGCACCCACGCAGTCCCCGCAGGTaGAGTGTACCTCACACGCTGCCACCTTCACTCGGG +
Preference number: 6 (lower is better)
Translates to: SRHRPHPRSPRR*SVPHTLPPSLG
Trigger: CCCGAGTGAAGGTGGCAGCGTGTGAGGTACACTCCACCTGCGGGGACTGCGTGGGTGCGGCCGATGCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CCCGGTGCACATCAATCTCCGAGGGCAGTACTGTCATaGCAGGGCAGCGGCTGGGGCCCTCACTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: PGAHQSPRAVLS*QGSGWGPHWHW
Trigger: CCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCCATGACAGTACTGCCCTCGGAGATTGATGTGCACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp CCCACAGTGGACGCGTTGGGGTGGTTGGCGGCCACGTaGAGCATGCTGGGGAACACGGTGACCGGTTCTGCG +
Preference number: 6 (lower is better)
Translates to: PTVDALGWLAAT*SMLGNTVTGSA
Trigger: CGCAGAACCGGTCACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GGCAGCACCAGTCCCACAGTGGACGCGTTGGGGTGGTaGGCGGCCACGTTGAGCATGCTGGGGAACACGGTG +
Preference number: 6 (lower is better)
Translates to: GSTSPTVDALGW*AATLSMLGNTV
Trigger: CACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GAGGTAGGCGGCAGCACCAGTCCCACAGTGGACGCGTTGGGGTGGTaGGCGGCCACGTTGAGCATGCTGGGGAACACGGTGACCGGTTCT +
Preference number: 6 (lower is better)
Translates to: EVGGSTSPTVDALGW*AATLSMLGNTVTGS
Trigger: AGAACCGGTCACCGTGTTCCCCAGCATGCTCAACGTGGCCGCCAACCACCCCAACGCGTCCACTGTGGGACTGGTGCTGCCGCCTACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GCGATCTCGGGCGTGTTCTCGAAGCGGTGGTCTTCTAGGCTACGGTaGCGCGGGAAGAAAGCGCTGCCGAAGCCGGTGTACGTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: AISGVFSKRWSSRLR*RGKKALPKPVYVAP
Trigger: GGGCGCCACGTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGCCCGAGATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp CAGGATGGTCAGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTaGCTCCGGCTGCAGCTGTATGTTGCGCTTGCTCTCGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: QDGQWVLQVGRSAIQ*LRLQLYVALALAGR
Trigger: CCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTGACCATCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCGGGTCCAACTGCAGGATTTTGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: PGPTAGFCCSCP*GAAGARTRPAG
Trigger: TCCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCTCACGGACAACTACAACAAAATCCTGCAGTTGGACCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GTTGGTACAGGCGGTTCACTGCCGCCAAGTACACGGTaGCCGCCGTGCCGTCCAGGGCGAAGTTGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: VGTGGSLPPSTR*PPCRPGRSCWW
Trigger: CCACCAACAACTTCGCCCTGGACGGCACGGCGGGCACCGTGTACTTGGCGGCAGTGAACCGCCTGTACCAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GGTCTTCTAGGCTACGGTTGCGCGGGAAGAAAGCGCTaGCGAAGCCGGTGTACGTGGCGCCCACGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: GLLGYGCAGRKR*RSRCTWRPRAD
Trigger: GTCTGCTCGTGGGCGCCACGTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp AATCCAGTTGCTCCGGCTGCAGCTGTATGTTGCGCTTaGTCTCGCAGGCCGGCCCGGTGCCCTGCACCACAC +
Preference number: 6 (lower is better)
Translates to: NPVAPAAAVCCA*SRRPARCPAPH
Trigger: GTGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp ACTGTGGGTTGGGGAGGTAGTCTAGGCGGAACCGGCTaGCCCTCTGTGCCTCTGCAGGGTCCAGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: TVGWGGSLGGTG*PSVPLQGPAAP
Trigger: AGGAGCTGCTGGACCCTGCAGAGGCACAGAGGGGCAGCCGGTTCCGCCTAGACTACCTCCCCAACCCACAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CGGGACCCACGGTCGCCTCGGCTTCCAGGCTCAAGTTaGCACTCGACAGTTGGTACAGGCGGTTCACTGCCG +
Preference number: 6 (lower is better)
Translates to: RDPRSPRLPGSS*HSTVGTGGSLP
Trigger: CGGCAGTGAACCGCCTGTACCAACTGTCGAGTGCCAACTTGAGCCTGGAAGCCGAGGCGACCGTGGGTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp AGCAGTGGGTGGGTTTCCTGTGGCGGGGAGCCACCCTaGGAGTTGAGGGTCTTCGAGGGCAGCACATACCGC +
Preference number: 6 (lower is better)
Translates to: SSGWVSCGGEPP*ELRVFEGSTYR
Trigger: GCGGTATGTGCTGCCCTCGAAGACCCTCAACTCCCAGGGTGGCTCCCCGCCACAGGAAACCCACCCACTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp CAATCCAGTTGCTCCGGCTGCAGCTGTATGTTGCGCTaGCTCTCGCAGGCCGGCCCGGTGCCCTGCACCACA +
Preference number: 6 (lower is better)
Translates to: QSSCSGCSCMLR*LSQAGPVPCTT
Trigger: TGTGGTGCAGGGCACCGGGCCGGCCTGCGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp AGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTTaGTCCGGCTGCAGCTGTATGTTGCGCTTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SGCCRWAAPQSS*SGCSCMLRLLS
Trigger: CGAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GTACTGTCATGGCAGGGCAGCGGCTGGGGCCCTCACTaGCACTGGTCCAGAAATGTGGCTGGCTGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: VLSWQGSGWGPH*HWSRNVAGWSW
Trigger: CCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGCTGCCCTGCCATGACAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp AAGAAGGTGGCTTTAGTCAGGGGCACCAGGATGTCTTaGGAGCCACCTGTGGGCACGGGCGCTAGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: KKVALVRGTRMS*EPPVGTGARGE
Trigger: CTCGCCCCTAGCGCCCGTGCCCACAGGTGGCTCCCAAGACATCCTGGTGCCCCTGACTAAAGCCACCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp ATGGCCCGCACGCTGAGGGAGTCCATCCCACAGCCCTaGAAGGACACGTTCAAGTTCCGGGGCTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: MARTLRESIPQP*KDTFKFRGLAS
Trigger: TGAGGCCAAGCCCCGGAACTTGAACGTGTCCTTCCAGGGCTGTGGGATGGACTCCCTCAGCGTGCGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp ACCGCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCCTGCTTGATCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TAGCKKARTKPS*CCSLAPCLIFR
Trigger: CCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp CAGTGGGTGCTGCAGGTGGGCCGCTCCGCAATCCAGTaGCTCCGGCTGCAGCTGTATGTTGCGCTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: QWVLQVGRSAIQ*LRLQLYVALAL
Trigger: GAGAGCAAGCGCAACATACAGCTGCAGCCGGAGCAACTGGATTGCGGAGCGGCCCACCTGCAGCACCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TGCGGTGGCACCGCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCCTGCTTGATCTTCAGGATGTTATCG +
Preference number: 6 (lower is better)
Translates to: CGGTAGCKKARTKPS*CCSLAPCLIFRMLS
Trigger: CGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGCGGTGCCACCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp CTGGGGCCCTCACTGGCACTGGTCCAGAAATGTGGCTGGCTGGAGTaGGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCCAGAGTGCAC +
Preference number: 6 (lower is better)
Translates to: LGPSLALVQKCGWLE*VQSCWSVHRVSRVH
Trigger: GTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TTCTCCACCACAGACTCCGTGCGCCGCAACATGAGCTTGGGGTTCTaGGCCGCCGAGGCGTCGATGAGGTCCACGAGCAGCTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: FSTTDSVRRNMSLGF*AAEASMRSTSSSFM
Trigger: CATGAAGGAGCTGCTCGTGGACCTCATCGACGCCTCGGCGGCCAAGAACCCCAAGCTCATGTTGCGGCGCACGGAGTCTGTGGTGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GTAAGCATCTTCTCCACCACAGACTCCGTGCGCCGCAACATGAGCTaGGGGTTCTTGGCCGCCGAGGCGTCGATGAGGTCCACGAGCAGC +
Preference number: 6 (lower is better)
Translates to: VSIFSTTDSVRRNMS*GFLAAEASMRSTSS
Trigger: GCTGCTCGTGGACCTCATCGACGCCTCGGCGGCCAAGAACCCCAAGCTCATGTTGCGGCGCACGGAGTCTGTGGTGGAGAAGATGCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GCGTGTTCTCGAAGCGGTGGTCTTCTAGGCTACGGTTaGGCGGGAAGAAAGCGCTGCCGAAGCCGGTGTACG +
Preference number: 6 (lower is better)
Translates to: ACSRSGGLLGYG*AGRKRCRSRCT
Trigger: CGTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGCTTGATCTTCAGGATG +
Preference number: 6 (lower is better)
Translates to: AGCKKARTKPSL*CSLAPCLIFRM
Trigger: CATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CACGCAGTCCCCGCAGGTGGAGTGTACCTCACACGCTaGCACCTTCACTCGGGCCATCTGGTGGGATGTCAT +
Preference number: 6 (lower is better)
Translates to: HAVPAGGVYLTR*HLHSGHLVGCH
Trigger: ATGACATCCCACCAGATGGCCCGAGTGAAGGTGGCAGCGTGTGAGGTACACTCCACCTGCGGGGACTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GGCCCTCACTGGCACTGGTCCAGAAATGTGGCTGGCTaGAGTTGGTGCAATCCTGCTGGAGTGTGCACCGGG +
Preference number: 6 (lower is better)
Translates to: GPHWHWSRNVAG*SWCNPAGVCTG
Trigger: CCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GCGGCTGGGGCCCTCACTGGCACTGGTCCAGAAATGTaGCTGGCTGGAGTTGGTGCAATCCTGCTGGAGTGT +
Preference number: 6 (lower is better)
Translates to: AAGALTGTGPEM*LAGVGAILLEC
Trigger: ACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CAGTGTTCAGGGATGTTCCACTCTCCCAGCAGTGGGTaGGTTTCCTGTGGCGGGGAGCCACCCTGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QCSGMFHSPSSG*VSCGGEPPWEL
Trigger: CAACTCCCAGGGTGGCTCCCCGCCACAGGAAACCCACCCACTGCTGGGAGAGTGGAACATCCCTGAACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GGCGTGTTCTCGAAGCGGTGGTCTTCTAGGCTACGGTaGCGCGGGAAGAAAGCGCTGCCGAAGCCGGTGTAC +
Preference number: 6 (lower is better)
Translates to: GVFSKRWSSRLR*RGKKALPKPVY
Trigger: GTACACCGGCTTCGGCAGCGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GGGTCCAGCAGCTCCTCGGCTGCCTCGTCTGCATATGCCCGGCCATaGATGAAGAAGTCTACAGGCGCCGAAGCATTGCTCAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: GSSSSSAASSAYARP*MKKSTGAEALLRAP
Trigger: TGGAGCCCTGAGCAATGCTTCGGCGCCTGTAGACTTCTTCATCAATGGCCGGGCATATGCAGACGAGGCAGCCGAGGAGCTGCTGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp ACCTGGAGCATAGAGCCCACGTTGAGGTCACTGCCGTaGATGGTGATCCTTGTACCCCCGGCCTTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: TWSIEPTLRSLP*MVILVPPAFGP
Trigger: GGGCCCAAAGGCCGGGGGTACAAGGATCACCATTCACGGCAGTGACCTCAACGTGGGCTCTATGCTCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCATTCAAGGTCCACGTCCTCCGCCCGCGGCCACTGTaGGTAGGGGACGTTCTTGCAGAAGGCTTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: PFKVHVLRPRPL*VGDVLAEGFQD
Trigger: ATCCTGGAAGCCTTCTGCAAGAACGTCCCCTACTCACAGTGGCCGCGGGCGGAGGACGTGGACCTTGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GTGGCTGGCTGGAGTTGGTGCAATCCTGCTGGAGTGTaGACCGGGTCTCCAGAGTGCACCAACCACAGTAGG +
Preference number: 6 (lower is better)
Translates to: VAGWSWCNPAGV*TGSPECTNHSR
Trigger: CCTACTGTGGTTGGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GGGTTCACAGGCCACACTGCCAATCCACACACCATGTaGCACATCACTGAGCCGACGGCCCAAGTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GFTGHTANPHTM*HITEPTAQVPA
Trigger: GGCAGGAACTTGGGCCGTCGGCTCAGTGATGTGGCACATGGTGTGTGGATTGGCAGTGTGGCCTGTGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 72 bp CCTCTGTGCCTCTGCAGGGTCCAGCAGCTCCTCGGCTaGCTCGTCTGCATATGCCCGGCCATTGATGAAGAA +
Preference number: 6 (lower is better)
Translates to: PLCLCRVQQLLG*LVCICPAIDEE
Trigger: TTCTTCATCAATGGCCGGGCATATGCAGACGAGGCAGCCGAGGAGCTGCTGGACCCTGCAGAGGCACAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GAGCGGATAGCGATCTCGGGCGTGTTCTCGAAGCGGTaGTCTTCTAGGCTACGGTTGCGCGGGAAGAAAGCG +
Preference number: 6 (lower is better)
Translates to: ERIAISGVFSKR*SSRLRLRGKKA
Trigger: CGCTTTCTTCCCGCGCAACCGTAGCCTAGAAGACCACCGCTTCGAGAACACGCCCGAGATCGCTATCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CTGGGGCCCTCACTGGCACTGGTCCAGAAATGTGGCTaGCTGGAGTTGGTGCAATCCTGCTGGAGTGTGCAC +
Preference number: 6 (lower is better)
Translates to: LGPSLALVQKCG*LELVQSCWSVH
Trigger: GTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGAGGGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TCCACTTCTCCCTCTTGGCTGTGGAGAACTGTGGGTTaGGGAGGTAGTCTAGGCGGAACCGGCTGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: STSPSWLWRTVG*GGSLGGTGCPS
Trigger: AGAGGGGCAGCCGGTTCCGCCTAGACTACCTCCCCAACCCACAGTTCTCCACAGCCAAGAGGGAGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GGGTCTTCTGCCAGTAGCGCTCGGCACGGCGGCTCTTaGTGCAGAAGACGAACAGAGCAACCACAGACAGCA +
Preference number: 6 (lower is better)
Translates to: GSSASSARHGGS*CRRRTEQPQTA
Trigger: TGCTGTCTGTGGTTGCTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCGAGCGCTACTGGCAGAAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp ATCAGAGCCACCACCTGTTCAAACTTGTGCTGTAGCTaGGTCCTGCGGGCTGTGGGGTTGGCCTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: IRATTCSNLCCS*VLRAVGLASRA
Trigger: TGCCCTGGAGGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAACAGGTGGTGGCTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GCAGGATCTGGGGACAGTCCTGAGGACTCGTGGGGTTaGGCGAGTCCTGGCACTGAGACTGGTTGGAGACAC +
Preference number: 6 (lower is better)
Translates to: AGSGDSPEDSWG*ASPGTETGWRH
Trigger: GTGTCTCCAACCAGTCTCAGTGCCAGGACTCGCCAAACCCCACGAGTCCTCAGGACTGTCCCCAGATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AACTTGTGCTGTAGCTGGGTCCTGCGGGCTGTGGGGTaGGCCTCCAGGGCAGCCATGATCTGTGGTCGATAC +
Preference number: 6 (lower is better)
Translates to: NLCCSWVLRAVG*ASRAAMICGRY
Trigger: GTATCGACCACAGATCATGGCTGCCCTGGAGGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GCCGGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTCAGGATGTTATCGTCCGACGGGTTA +
Preference number: 6 (lower is better)
Translates to: AGCKKARTKPSLCCS*APCLIFRMLSSDGL
Trigger: TAACCCGTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCACACTGCCAATCCACACACCATGTGCCACATCACTaGGCCGACGGCCCAAGTTCCTGCCACGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: PHCQSTHHVPHH*ADGPSSCHGWS
Trigger: TGACCATCCGTGGCAGGAACTTGGGCCGTCGGCTCAGTGATGTGGCACATGGTGTGTGGATTGGCAGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS TCA 72 bp GAGCAACCACAGACAGCAGCAACAGGACACTGCAGATaGCGATGGACACCACAATGGCCGTCTCGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: EQPQTAATGHCR*RWTPQWPSRCP
Trigger: GGGGCAGCGAGACGGCCATTGTGGTGTCCATCGTCATCTGCAGTGTCCTGTTGCTGCTGTCTGTGGTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp ACTGGGTTCTGCATGTACCAGAAGGTGAGGTTTCCGTaGACGCAGCCCCGGCTCTCGAAGCGCACACACACA +
Preference number: 6 (lower is better)
Translates to: TGFCMYQKVRFP*TQPRLSKRTHT
Trigger: TGTGTGTGTGCGCTTCGAGAGCCGGGGCTGCGTGCACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 72 bp CTGCGGCCTGGGCTGATGGCTGTGATGACTGGGTTCTaGATGTACCAGAAGGTGAGGTTTCCGTGCACGCAG +
Preference number: 6 (lower is better)
Translates to: LRPGLMAVMTGF*MYQKVRFPCTQ
Trigger: CTGCGTGCACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGTCATCACAGCCATCAGCCCAGGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS GCA 72 bp TCTTCTGCCAGTAGCGCTCGGCACGGCGGCTCTTGGTaGAGAAGACGAACAGAGCAACCACAGACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SSASSARHGGSW*RRRTEQPQTAA
Trigger: TGCTGCTGTCTGTGGTTGCTCTGTTCGTCTTCTGCACCAAGAGCCGCCGTGCCGAGCGCTACTGGCAGAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GCCAGGCTGCACCTGTCACGCACTGCGAAGTCCTTCTaGTGCTCCAGAGCATGGACGAAGACGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: ARLHLSRTAKSF*CSRAWTKTMRK
Trigger: CTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAGCCTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CAGGTCAGAGATGGAGCAGGCATCGATGAAGGCCTGTaGGATGACAGACAGGCAGGCGTCGATGTGGTCCGT +
Preference number: 6 (lower is better)
Translates to: QVRDGAGIDEGL*DDRQAGVDVVR
Trigger: ACGGACCACATCGACGCCTGCCTGTCTGTCATCGCACAGGCCTTCATCGATGCCTGCTCCATCTCTGACCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CACTGGCACTGGTCCAGAAATGTGGCTGGCTGGAGTTaGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: HWHWSRNVAGWS*CNPAGVCTGSP
Trigger: TGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CCTTTGGGCCCATGGAAGGCTCCAGTGAGTGGACTGTaGGCAGCACATAGGAGAACTGTTCCCGAGACCTGC +
Preference number: 6 (lower is better)
Translates to: PLGPWKAPVSGL*AAHRRTVPETC
Trigger: GCAGGTCTCGGGAACAGTTCTCCTATGTGCTGCCCACAGTCCACTCACTGGAGCCTTCCATGGGCCCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp GACAGGGCTGCGGCCTGGGCTGATGGCTGTGATGACTaGGTTCTGCATGTACCAGAAGGTGAGGTTTCCGTG +
Preference number: 6 (lower is better)
Translates to: DRAAAWADGCDD*VLHVPEGEVSV
Trigger: CACGGAAACCTCACCTTCTGGTACATGCAGAACCCAGTCATCACAGCCATCAGCCCAGGCCGCAGCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 72 bp TGCAGTGTGGCGATGGTCTGGTTGAAGTTCCCCACCTaGATTGTGATGGGCAGCTGTCCTTCAGCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: CSVAMVWLKFPT*IVMGSCPSAVP
Trigger: GGGCACGGCTGAAGGACAGCTGCCCATCACAATCCAGGTGGGGAACTTCAACCAGACCATCGCCACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TCACTGGCACTGGTCCAGAAATGTGGCTGGCTGGAGTaGGTGCAATCCTGCTGGAGTGTGCACCGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SLALVQKCGWLE*VQSCWSVHRVS
Trigger: GGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGACCAGTGCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TTCAGGATGTTATCGTCCGACGGGTTAAGGTCGAAGGTGAAGAGCTaGGCCAAGTCTCCACGCGCGTCCAGGGAGCGGATAGCGATCTCG +
Preference number: 6 (lower is better)
Translates to: FRMLSSDGLRSKVKS*AKSPRASRERIAIS
Trigger: CGAGATCGCTATCCGCTCCCTGGACGCGCGTGGAGACTTGGCCAAGCTCTTCACCTTCGACCTTAACCCGTCGGACGATAACATCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp AAGGCACGCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTaGATCTTCAGGATGTTATCGTCCGACGGGTTAAGGTCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: KARTKPSLCCSLAPC*IFRMLSSDGLRSKV
Trigger: CACCTTCGACCTTAACCCGTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp ACCTGTTCAAACTTGTGCTGTAGCTGGGTCCTGCGGGCTGTGGGGTaGGCCTCCAGGGCAGCCATGATCTGTGGTCGATACCTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: TCSNLCCSWVLRAVG*ASRAAMICGRYLLA
Trigger: TGCTAAGAGGTATCGACCACAGATCATGGCTGCCCTGGAGGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CCTCTTAGACGACAGCCATCATTCCAAACACAGAGGTaGCCCAGGTCCTCACGGCCCAGGCACTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: PLRRQPSFQTQR*PRSSRPRHWEQ
Trigger: CTGTTCCCAGTGCCTGGGCCGTGAGGACCTGGGTCACCTCTGTGTTTGGAATGATGGCTGTCGTCTAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CGCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTaGTTGATCTTCAGGATGTTATCGTCCGACGGGTTA +
Preference number: 6 (lower is better)
Translates to: RTKPSLCCSLAP*LIFRMLSSDGL
Trigger: TAACCCGTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GGGTGCAAGAAGGCACGCACGAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTGATCTTCAGGATGTTA +
Preference number: 6 (lower is better)
Translates to: GCKKARTKPSLC*SLAPCLIFRML
Trigger: TAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GTCCAGAAATGTGGCTGGCTGGAGTTGGTGCAATCCTaGTGGAGTGTGCACCGGGTCTCCAGAGTGCACCAA +
Preference number: 6 (lower is better)
Translates to: VQKCGWLELVQS*WSVHRVSRVHQ
Trigger: TTGGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp AGGCTGCACCTGTCACGCACTGCGAAGTCCTTCTGCTaGTCCAGAGCATGGACGAAGACGATGAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: RLHLSRTAKSFC*SRAWTKTMRKC
Trigger: GCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CAGAAATGTGGCTGGCTGGAGTTGGTGCAATCCTGCTaGAGTGTGCACCGGGTCTCCAGAGTGCACCAACCA +
Preference number: 6 (lower is better)
Translates to: QKCGWLELVQSC*SVHRVSRVHQP
Trigger: TGGTTGGTGCACTCTGGAGACCCGGTGCACACTCCAGCAGGATTGCACCAACTCCAGCCAGCCACATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TTGACCCTTACAGACATCTCAACGGTCACGTGGTCCTaGCCAGCAGGAAAGGATGGAAACTGGGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LTLTDISTVTWS*PAGKDGNWALG
Trigger: GCCCAGGGCCCAGTTTCCATCCTTTCCTGCTGGCCAGGACCACGTGACCGTTGAGATGTCTGTAAGGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TCGTGGGGTTTGGCGAGTCCTGGCACTGAGACTGGTTaGAGACACATGAATGCAGCTGGATGCACCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SWGLASPGTETG*RHMNAAGCTRS
Trigger: GCTCCTGGTGCATCCAGCTGCATTCATGTGTCTCCAACCAGTCTCAGTGCCAGGACTCGCCAAACCCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TTACCACGTCTGAGAAGGCCCCTGCGGCAGGCCCTGTaGCACACACGATCTCCTCTGAAACGGTGTATCTGT +
Preference number: 6 (lower is better)
Translates to: LPRLRRPLRQAL*HTRSPLKRCIC
Trigger: ACAGATACACCGTTTCAGAGGAGATCGTGTGTGCCACAGGGCCTGCCGCAGGGGCCTTCTCAGACGTGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CAA 72 bp TTATCGTCCGACGGGTTAAGGTCGAAGGTGAAGAGCTaGGCCAAGTCTCCACGCGCGTCCAGGGAGCGGATA +
Preference number: 6 (lower is better)
Translates to: LSSDGLRSKVKS*AKSPRASRERI
Trigger: TATCCGCTCCCTGGACGCGCGTGGAGACTTGGCCAAGCTCTTCACCTTCGACCTTAACCCGTCGGACGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp CTGCTTACTACCTGCATGCTCTCGTTCAGGCTGATCTaGAGGAGCCTCCCTGTGGCGGTGCCCAGAAAGACG +
Preference number: 6 (lower is better)
Translates to: LLTTCMLSFRLI*RSLPVAVPRKT
Trigger: CGTCTTTCTGGGCACCGCCACAGGGAGGCTCCTCAAGATCAGCCTGAACGAGAGCATGCAGGTAGTAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AGCTCCTCGGCTGCCTCGTCTGCATATGCCCGGCCATaGATGAAGAAGTCTACAGGCGCCGAAGCATTGCTC +
Preference number: 6 (lower is better)
Translates to: SSSAASSAYARP*MKKSTGAEALL
Trigger: GAGCAATGCTTCGGCGCCTGTAGACTTCTTCATCAATGGCCGGGCATATGCAGACGAGGCAGCCGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TGCTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTTGTTGTaGAGCAGTGAGGAGAACAGGCTGATCCCCTCCTCCATGCTGGGC +
Preference number: 6 (lower is better)
Translates to: CCSRAWTKTMRKCLL*SSEENRLIPSSMLG
Trigger: GCCCAGCATGGAGGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp GAACGTGGGCTCCCGGCCAATGTGGTGTACAGCCATTaGTACATTCTGCACCATGTGGAAGCGTTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: ERGLPANVVYSH*YILHHVEAFAS
Trigger: GCTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGAGCCCACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS TCA 72 bp CAGTGTGTTCAGTTTCTTACGGCCGTCCTCCACCACTaGTGTGTCATCCAGGTCCCGGAGGACGTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: QCVQFLTAVLHH*CVIQVPEDVAL
Trigger: CAGAGCTACGTCCTCCGGGACCTGGATGACACATCAGTGGTGGAGGACGGCCGTAAGAAACTGAACACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CCTGGCTCTTCTGGGTTGTGTGCAGCACCACTTGGTTaGAGCGGACCAGTGAGTTATTCGCCCATACAGCCT +
Preference number: 6 (lower is better)
Translates to: PGSSGLCAAPLG*SGPVSYSPIQP
Trigger: AGGCTGTATGGGCGAATAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CGGTTCAGCTCCTTGGTGAGATCCGTCATGTCTGTCTaGAGCTCCGCAAAGCCTTTACGGATCTCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: RFSSLVRSVMSV*SSAKPLRISSR
Trigger: CCGAGAGGAGATCCGTAAAGGCTTTGCGGAGCTGCAGACAGACATGACGGATCTCACCAAGGAGCTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp GAAGAGCACTTGGGGAAGAAGGTTCGAGTCACGAAGTaGTTGTACTCCAAGAAGGGGATGCCCTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: EEHLGKKVRVTK*LYSKKGMPWLR
Trigger: CCGCAGCCAGGGCATCCCCTTCTTGGAGTACAAGCACTTCGTGACTCGAACCTTCTTCCCCAAGTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp TTGTTTTCCATCAGAGCCACCACCTGTTCAAACTTGTaGTGTAGCTGGGTCCTGCGGGCTGTGGGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LFSIRATTCSNL*CSWVLRAVGLA
Trigger: GGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAACAGGTGGTGGCTCTGATGGAAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp ACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTaGATCTTCAGGATGTTATCGTCCGACGGGTTAAGG +
Preference number: 6 (lower is better)
Translates to: TKPSLCCSLAPC*IFRMLSSDGLR
Trigger: CCTTAACCCGTCGGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AAGAAGGCACGCACGAAGCCCAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTCAGGATGTTATCGTCC +
Preference number: 6 (lower is better)
Translates to: KKARTKPSLCCS*APCLIFRMLSS
Trigger: GGACGATAACATCCTGAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGCGTGCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GAGCACTTGGGGAAGAAGGTTCGAGTCACGAAGTGCTaGTACTCCAAGAAGGGGATGCCCTGGCTGCGGTTC +
Preference number: 6 (lower is better)
Translates to: EHLGKKVRVTKC*YSKKGMPWLRF
Trigger: GAACCGCAGCCAGGGCATCCCCTTCTTGGAGTACAAGCACTTCGTGACTCGAACCTTCTTCCCCAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TCCAAGTCTTTCACTCTGCCCAGGGTACTGTCCTTCTaGTCTGTGAGGCTCATGGCTAGGGAGGCGCCCTCA +
Preference number: 6 (lower is better)
Translates to: SKSFTLPRVLSF*SVRLMAREAPS
Trigger: TGAGGGCGCCTCCCTAGCCATGAGCCTCACAGACAAGAAGGACAGTACCCTGGGCAGAGTGAAAGACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp TCCTTATGGATGACGAGGGTGAGCGGCTCTCCTGGGTaGTGTTTGATCCACTTCTCCCTCTTGGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: SLWMTRVSGSPG*CLIHFSLLAVE
Trigger: CTCCACAGCCAAGAGGGAGAAGTGGATCAAACATCACCCAGGAGAGCCGCTCACCCTCGTCATCCATAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp GACGAAGACGATGAGGAAGTGCTTGTTGTTGAGCAGTaGGGAGAACAGGCTGATCCCCTCCTCCATGCTGGG +
Preference number: 6 (lower is better)
Translates to: DEDDEEVLVVEQ*GEQADPLLHAG
Trigger: CCCAGCATGGAGGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp CTGTGGGCAGCACATAGGAGAACTGTTCCCGAGACCTaGCTTCTTTGGAGACGTTCACCGTTACCACGTCTG +
Preference number: 6 (lower is better)
Translates to: LWAAHRRTVPET*LLWRRSPLPRL
Trigger: CAGACGTGGTAACGGTGAACGTCTCCAAAGAAGGCAGGTCTCGGGAACAGTTCTCCTATGTGCTGCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp TTCCGAGACTCCTCGGCCAGGTGTGCGTTCATTTCCTaGTCGCTGAGCGGCGTCATGTCTTGGATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: FRDSSARCAFIS*SLSGVMSWICL
Trigger: TAAACAGATCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGAACGCACACCTGGCCGAGGAGTCTCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp GCTTCAGACTCAGTGGAAATACCTGGCTCTTCTGGGTaGTGTGCAGCACCACTTGGTTGCAGCGGACCAGTG +
Preference number: 6 (lower is better)
Translates to: ASDSVEIPGSSG*CAAPLGCSGPV
Trigger: CACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATTTCCACTGAGTCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AGAACGTGGGCTCCCGGCCAATGTGGTGTACAGCCATaGATACATTCTGCACCATGTGGAAGCGTTCGCCAG +
Preference number: 6 (lower is better)
Translates to: RTWAPGQCGVQP*IHSAPCGSVRQ
Trigger: CTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGAGCCCACGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CAA 90 bp GCCCCTTCAGCTTCAGACTCAGTGGAAATACCTGGCTCTTCTGGGTaGTGTGCAGCACCACTTGGTTGCAGCGGACCAGTGAGTTATTCG +
Preference number: 6 (lower is better)
Translates to: APSASDSVEIPGSSG*CAAPLGCSGPVSYS
Trigger: CGAATAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATTTCCACTGAGTCTGAAGCTGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TTCTGCTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTTGTaGTTGAGCAGTGAGGAGAACAGGCTGATCCCCTCCTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: FCCSRAWTKTMRKCL*LSSEENRLIPSSML
Trigger: CAGCATGGAGGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TCCTTCTGCTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTaGTTGTTGAGCAGTGAGGAGAACAGGCTGATCCCCTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: SFCCSRAWTKTMRKC*LLSSEENRLIPSSM
Trigger: CATGGAGGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp GGCCAGGTGTGCGTTCATTTCCTGCTCGCTGAGCGGCGTCATGTCTaGGATCTGTTTATAATAGCGCTGTACGGTCTTCCGGTACTCAGG +
Preference number: 6 (lower is better)
Translates to: GQVCVHFLLAERRHV*DLFIIALYGLPVLR
Trigger: CCTGAGTACCGGAAGACCGTACAGCGCTATTATAAACAGATCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGAACGCACACCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp AGCTCCGCAAAGCCTTTACGGATCTCCTCTCGGATCTaGGACTCCATCTCTTCCATCTGCAGCAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSAKPLRISSRI*DSISSICSRVF
Trigger: GAAGACCCTGCTGCAGATGGAAGAGATGGAGTCTCAGATCCGAGAGGAGATCCGTAAAGGCTTTGCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp TCCCGGCCAATGTGGTGTACAGCCATTGATACATTCTaGACCATGTGGAAGCGTTCGCCAGCCACAGTGATG +
Preference number: 6 (lower is better)
Translates to: SRPMWCTAIDTF*TMWKRSPATVM
Trigger: CATCACTGTGGCTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 72 bp ATGTGGTGTACAGCCATTGATACATTCTGCACCATGTaGAAGCGTTCGCCAGCCACAGTGATGGTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: MWCTAIDTFCTM*KRSPATVMVLP
Trigger: CGGCAGGACCATCACTGTGGCTGGCGAACGCTTCCACATGGTGCAGAATGTATCAATGGCTGTACACCACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CCA 72 bp TTGCTCCTTATGGATGACGAGGGTGAGCGGCTCTCCTaGGTGATGTTTGATCCACTTCTCCCTCTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: LLLMDDEGERLS*VMFDPLLPLGC
Trigger: ACAGCCAAGAGGGAGAAGTGGATCAAACATCACCCAGGAGAGCCGCTCACCCTCGTCATCCATAAGGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp CCTTCAGCCGTGCCCAGCGACTCATTGACTGAGCAGTaGATGACTCTGTCTGAGATGATTTGGATGTCGCAG +
Preference number: 6 (lower is better)
Translates to: PSAVPSDSLTEQ*MTLSEMIWMSQ
Trigger: CTGCGACATCCAAATCATCTCAGACAGAGTCATCCACTGCTCAGTCAATGAGTCGCTGGGCACGGCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp ATGGGCAGCTGTCCTTCAGCCGTGCCCAGCGACTCATaGACTGAGCAGTGGATGACTCTGTCTGAGATGATT +
Preference number: 6 (lower is better)
Translates to: MGSCPSAVPSDS*TEQWMTLSEMI
Trigger: AATCATCTCAGACAGAGTCATCCACTGCTCAGTCAATGAGTCGCTGGGCACGGCTGAAGGACAGCTGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TCCAGAGCATGGACGAAGACGATGAGGAAGTGCTTGTaGTTGAGCAGTGAGGAGAACAGGCTGATCCCCTCC +
Preference number: 6 (lower is better)
Translates to: SRAWTKTMRKCL*LSSEENRLIPS
Trigger: GGAGGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TGCTCCAGAGCATGGACGAAGACGATGAGGAAGTGCTaGTTGTTGAGCAGTGAGGAGAACAGGCTGATCCCC +
Preference number: 6 (lower is better)
Translates to: CSRAWTKTMRKC*LLSSEENRLIP
Trigger: GGGGATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TGGATTGTGATGGGCAGCTGTCCTTCAGCCGTGCCCAGCGACTCATaGACTGAGCAGTGGATGACTCTGTCTGAGATGATTTGGATGTCG +
Preference number: 6 (lower is better)
Translates to: WIVMGSCPSAVPSDS*TEQWMTLSEMIWMS
Trigger: CGACATCCAAATCATCTCAGACAGAGTCATCCACTGCTCAGTCAATGAGTCGCTGGGCACGGCTGAAGGACAGCTGCCCATCACAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 90 bp TTTTCTGTGTCCAAGTCTTTCACTCTGCCCAGGGTACTGTCCTTCTaGTCTGTGAGGCTCATGGCTAGGGAGGCGCCCTCAGGTATCTTG +
Preference number: 6 (lower is better)
Translates to: FSVSKSFTLPRVLSF*SVRLMAREAPSGIL
Trigger: CAAGATACCTGAGGGCGCCTCCCTAGCCATGAGCCTCACAGACAAGAAGGACAGTACCCTGGGCAGAGTGAAAGACTTGGACACAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp GGTATAGGTAACCAGGATCCATGGGGTCAAACTGCATaGCGTGATGCACAGGCTCCCCATAGGCTACAGTCA +
Preference number: 6 (lower is better)
Translates to: GIGNQDPWGQTA*RDAQAPHRLQS
Trigger: TGACTGTAGCCTATGGGGAGCCTGTGCATCACGTCATGCAGTTTGACCCCATGGATCCTGGTTACCTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp ACTCCTCGGCCAGGTGTGCGTTCATTTCCTGCTCGCTaGGCGGCGTCATGTCTTGGATCTGTTTATAATAGC +
Preference number: 6 (lower is better)
Translates to: TPRPGVRSFPAR*AASCLGSVYNS
Trigger: GCTATTATAAACAGATCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGAACGCACACCTGGCCGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp AGACTCAGTGGAAATACCTGGCTCTTCTGGGTTGTGTaGAGCACCACTTGGTTGCAGCGGACCAGTGAGTTA +
Preference number: 6 (lower is better)
Translates to: RLSGNTWLFWVV*STTWLQRTSEL
Trigger: TAACTCACTGGTCCGCTGCAACCAAGTGGTGCTGCACACAACCCAGAAGAGCCAGGTATTTCCACTGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS GCA 72 bp TGCTGCTCCAGAGCATGGACGAAGACGATGAGGAAGTaGTTGTTGTTGAGCAGTGAGGAGAACAGGCTGATC +
Preference number: 6 (lower is better)
Translates to: CCSRAWTKTMRK*LLLSSEENRLI
Trigger: GATCAGCCTGTTCTCCTCACTGCTCAACAACAAGCACTTCCTCATCGTCTTCGTCCATGCTCTGGAGCAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TTGAGAACCTTGCAGAACGTGGGCTCCCGGCCAATGTaGTGTACAGCCATTGATACATTCTGCACCATGTGG +
Preference number: 6 (lower is better)
Translates to: LRTLQNVGSRPM*CTAIDTFCTMW
Trigger: CCACATGGTGCAGAATGTATCAATGGCTGTACACCACATTGGCCGGGAGCCCACGTTCTGCAAGGTTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000015511.15
ENSMUST00000131590.2
CDS CAA 72 bp GGACAGGCAGCTGGTACAGGCTGTATGGGGGTAGACTaGTCCAATTCGGCTGCAGTCGTAGATGGTGAAATT +
Preference number: 6 (lower is better)
Translates to: GQAAGTGCMGVD*SNSAAVVDGEI
Trigger: AATTTCACCATCTACGACTGCAGCCGAATTGGACAAGTCTACCCCCATACAGCCTGTACCAGCTGCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp AGGAAGTCAAAGAAATACTTGACAGCCAGCGGGGGCTaGTCCTCTCGGATGCTCAGGATAGCCTTGAACAGG +
Preference number: 6 (lower is better)
Translates to: RKSKKYLTASGG*SSRMLRIALNR
Trigger: CCTGTTCAAGGCTATCCTGAGCATCCGAGAGGACAAGCCCCCGCTGGCTGTCAAGTATTTCTTTGACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp ATATTGTTTTCCATCAGAGCCACCACCTGTTCAAACTaGTGCTGTAGCTGGGTCCTGCGGGCTGTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: ILFSIRATTCSN*CCSWVLRAVGL
Trigger: CAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAACAGGTGGTGGCTCTGATGGAAAACAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp ATCTCTGGCAATACTTTCTTGCGGTGGCTCTGCCGGTaGGATTTCTTAGGCTCTACCAGCTCATCCGTAGGT +
Preference number: 6 (lower is better)
Translates to: ISGNTFLRWLCR*DFLGSTSSSVG
Trigger: ACCTACGGATGAGCTGGTAGAGCCTAAGAAATCTCACCGGCAGAGCCACCGCAAGAAAGTATTGCCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp ACTCTGTCTGAGATGATTTGGATGTCGCAGGACACCTaGCCAATCTTGATGTGGTACTCATGGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TLSEMIWMSQDT*PILMWYSWLSS
Trigger: GCTGGAGAGCCATGAGTACCACATCAAGATTGGCCAGGTGTCCTGCGACATCCAAATCATCTCAGACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CAA 72 bp TGCGTTCATTTCCTGCTCGCTGAGCGGCGTCATGTCTaGGATCTGTTTATAATAGCGCTGTACGGTCTTCCG +
Preference number: 6 (lower is better)
Translates to: CVHFLLAERRHV*DLFIIALYGLP
Trigger: CGGAAGACCGTACAGCGCTATTATAAACAGATCCAAGACATGACGCCGCTCAGCGAGCAGGAAATGAACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS CCA 72 bp TTGACTGAGCAGTGGATGACTCTGTCTGAGATGATTTaGATGTCGCAGGACACCTGGCCAATCTTGATGTGG +
Preference number: 6 (lower is better)
Translates to: LTEQWMTLSEMI*MSQDTWPILMW
Trigger: CCACATCAAGATTGGCCAGGTGTCCTGCGACATCCAAATCATCTCAGACAGAGTCATCCACTGCTCAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15
CDS TCA 72 bp CATATTTATAAATCTCAGCCATGGCCACGTTTGTGTTaGACTCATTCTGGTATTTCCGAGACTCCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: HIYKSQPWPRLC*THSGISETPRP
Trigger: TGGCCGAGGAGTCTCGGAAATACCAGAATGAGTTCAACACAAACGTGGCCATGGCTGAGATTTATAAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015511.15