RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031385

Ensembl transcript IDs: ENSMUST00000002079.7

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCGCACGGCAGCACCCATaGCCAGGCCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIARQHP*PGPTGP
Trigger: AGGCCCAGTTGGGCCTGGGCATGGGTGCTGCCGTGC...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGGGTGGCACTCCTGCTaGCAGCTTGCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCGWHSC*QLACQA
Trigger: GGCCTGGCAGGCAAGCTGTCAGCAGGAGTGCCACCC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCAGCAGATCTGGACTaGTGGCTGAGCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIPADLD*WLSLGA
Trigger: GGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGG...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCACTGCCCATGGATGGTaGGCTGGGTGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSTAHGW*AGCPLP
Trigger: AGGCAGGGGGCACCCAGCTCACCATCCATGGGCAGT...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCTCCCATTGGCCGCCTaGCAGTGGCTGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSLPLAA*QWLQSG
Trigger: CCCTGACTGCAGCCACTGCCAGGCGGCCAATGGGAG...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGAGCCCTGGCTGCAGTaGGCAGCCAACATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILEPWLQ*AANMAG
Trigger: CCCGGCCATGTTGGCTGCCCACTGCAGCCAGGGCTC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCATCTGGACTGATGGCTaGGCCTGGGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSIWTDG*AWGPHL
Trigger: CAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGAT...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCAGGCGGCAAGCCAGCTaGATCTTCTGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSRRQAS*IFWATG
Trigger: CCCTGTGGCCCAGAAGATGCAGCTGGCTTGCCGCCT...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCACCAAGGCAGCCACCTaGTGCAGGCGGCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLTKAAT*CRRQAS
Trigger: GCTGGCTTGCCGCCTGCAGCAGGTGGCTGCCTTGGT...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCGTTGGCGGCCTGCGATaGGGCTGGGGGTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSVGGLR*GWGCVH
Trigger: ATGAACACACCCCCAGCCCCATCGCAGGCCGCCAAC...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAGTGGGCAGCCAACATaGCCGGGGAAGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWISGQPT*PGKKAR
Trigger: GCGTGCCTTCTTCCCCGGCCATGTTGGCTGCCCACT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTGCGCCGCACTTTaGCCCCTTCTGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSCCAAL*PLLPPQ
Trigger: CTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCTCTGACAGGGTTAGGTaGCCAGCTAGGCCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWISDRVR*PARPER
Trigger: GCGCTCAGGCCTAGCTGGTCACCTAACCCTGTCAGA...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCTGCTGACAGCTTaGCTGCCAGGCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILLLLTA*LPGLWP
Trigger: TGGCCAGAGGCCTGGCAGGCAAGCTGTCAGCAGGAG...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCGCAGGTTGCCCATCTaGACCACAAACTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIRRLPI*TTNCGR
Trigger: CCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCG...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCAGTGAGCTGGGCCTGTaGGCACTCAGCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLSELGL*ALSQVT
Trigger: CGTGACCTGGCTGAGTGCCCACAGGCCCAGCTCACT...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTGCCTGCCAGGCCTCTaGCCACTAGCAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCCLPGL*PLAGGL
Trigger: GAGACCTCCTGCTAGTGGCCAGAGGCCTGGCAGGCA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCACTGGAGAAAGGCTGTaGCCCAGCCAGCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLTGERL*PSQLAH
Trigger: GTGCGCCAGCTGGCTGGGCCACAGCCTTTCTCCAGT...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGCTAGACCCTCAACCTaGGGGCAAGCCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCARPST*GQASGP
Trigger: TGGCCCAGAGGCTTGCCCCCAGGTTGAGGGTCTAGC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCGGCACTGCTGGACTGTaGCACAGGAGGAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIGTAGL*HRRRLD
Trigger: ATCCAGCCTCCTCCTGTGCCACAGTCCAGCAGTGCC...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCGGGTGCCTGAACCATTaGTGGGTTGAGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSGCLNH*WVEGLG
Trigger: CCCAAGCCCCTCAACCCACCAATGGTTCAGGCACCC...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCGGAGGCTGGATGAGTTaGCAGAGCAGAGCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSGGWMS*QSRAWN
Trigger: GTTCCACGCTCTGCTCTGTCAACTCATCCAGCCTCC...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCATGGACTGTCCCAGTTaGAGCAGAGGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCMDCPS*SRGWAS
Trigger: GGAGGCCCAGCCTCTGCTGCAACTGGGACAGTCCAT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCCTGGGGGCCCCACTTaGTGGGAATGGTATACCTGG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLPGGPT*WEWYTW
Trigger: CCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGG...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGATACAGTGGCTACTCTaGGGGCACCAGTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILIQWLL*GHQWHR
Trigger: GCGGTGCCACTGGTGCCCCCAGAGTAGCCACTGTAT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGAGATACTGCCCATaGATGGTGAGCTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSWRYCP*MVSWVP
Trigger: GGGCACCCAGCTCACCATCCATGGGCAGTATCTCCA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCCTGAACCATTGGTaGGTTGAGGGGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSCLNHW*VEGLGV
Trigger: CACCCCAAGCCCCTCAACCCACCAATGGTTCAGGCA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCATGCCCAGGCCCAACTaGGCCTCCACAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLMPRPN*ASTGKV
Trigger: CACCTTTCCTGTGGAGGCCCAGTTGGGCCTGGGCAT...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAACTCCTTGCGGCACTaGTCACCCACACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWINSLRH*SPTPVS
Trigger: GGAGACTGGTGTGGGTGACCAGTGCCGCAAGGAGTT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCGAAGGGCAGCCAGTCTaGCCCAGACTCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIEGQPV*PRLWET
Trigger: TGTTTCCCAGAGTCTGGGCCAGACTGGCTGCCCTTC...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCGCCTGGTACAACACTTaGGTCACATCCCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLAWYNT*VTSPRR
Trigger: GCGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGC...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTGGAACCCAGGATGGTaGTGGCCAAGCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCWNPGW*WPSHLL
Trigger: CAGAAGGTGGCTTGGCCATCACCATCCTGGGTTCCA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCAGGGTCCTGGTAGGTaGAGTTCTGGGTTGAGATGC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIQGPGR*SSGLRC
Trigger: GCATCTCAACCCAGAACTTCACCTACCAGGACCCTG...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAGATGGATACAGGCCTaGGGATCTGCAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCRWIQA*GSAAGA
Trigger: TGCCCCTGCTGCAGATCCTCAGGCCTGTATCCATCT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCTGGCTGGCACTCGATaGACTCCACTGTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLLAGTR*TPLFPA
Trigger: AGCAGGGAACAGTGGAGTGCATCGAGTGCCAGCCAG...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCAGAAGCGATGGACCCTaGTCAAAGGCAGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLRSDGP*SKAAAA
Trigger: TGCCGCTGCTGCCTTTGACCAGGGTCCATCGCTTCT...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCGTAAGGAAGGCAGCCTaGATAAGGCCCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLVRKAA*IRPWPW
Trigger: CCATGGCCAGGGCCTTATCCAGGCTGCCTTCCTTAC...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCTGTTCCACAGCACCTaGTGGGCACAAAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSLFHST*WAQRPI
Trigger: TATGGGCCTTTGTGCCCACCAGGTGCTGTGGAACAG...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCAGGGTTGCAGGGCTaGCCAGCCACAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCSGLQG*PATVTA
Trigger: TGCTGTAACTGTGGCTGGCCAGCCCTGCAACCCTGA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGCCCAGCAGTGCCATTaGGAGCAGGAGATGTCACAC +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILAQQCH*EQEMSH
Trigger: GTGTGACATCTCCTGCTCCCAATGGCACTGCTGGGC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAATGGCCACTTGGACTaGCCCAGCAGTGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCNGHLD*PSSAIG
Trigger: CCCAATGGCACTGCTGGGCCAGTCCAAGTGGCCATT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGACCACTGCTTCTCCTaGCTCAGTCTGGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILDHCFS*LSLGHG
Trigger: ACCATGCCCCAGACTGAGCCAGGAGAAGCAGTGGTC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAAAGAAGACTCGCTTTaGGAGGGCCCCATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIKEDSL*EGPIWH
Trigger: GTGCCAGATGGGGCCCTCCCAAAGCGAGTCTTCTTT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGTATAGGAATCCCTaGCCCCCACTAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSWYRNP*PPLALA
Trigger: TGCCAGTGCTAGTGGGGGCCAGGGATTCCTATACCA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTTGAGGGGCTTGGGGTaGTGGCTCACAGTACAAGTG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSLRGLG*WLTVQV
Trigger: CACTTGTACTGTGAGCCACCACCCCAAGCCCCTCAA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGAGTTGTGTGAGACCCTaGCGCACGGTGACACTGCGA +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILSCVRP*RTVTLR
Trigger: TCGCAGTGTCACCGTGCGCCAGGGTCTCACACAACT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCATGCCCAAAGACTATaGGGACCACTGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSHAQRL*GPLLLL
Trigger: CAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATG...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCCGTCCTGCGTAACATaGGCTTGGGGTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSPSCVT*AWGSCV
Trigger: TACACAAGAACCCCAAGCTCATGTTACGCAGGACGG...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGACACCCTGCTTCACTTaGCCACAAGCCACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILTPCFT*PQATSS
Trigger: GGAACTGGTGGCTTGTGGGCAAGTGAAGCAGGGTGT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCCTGTCTGGAGATACTaGCCATGGATGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLPVWRY*PWMVSW
Trigger: CCAGCTCACCATCCATGGGCAGTATCTCCAGACAGG...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCGGTGCCAGCACCAGGTaGTTGAAGCTGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIGASTR*LKLVFG
Trigger: ACCAAATACCAGCTTCAACCACCTGGTGCTGGCACC...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCCCACTAGGCCTACTGTaGTCACTCCCAGGGTATTGG +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCPLGLL*SLPGYW
Trigger: CCAATACCCTGGGAGTGACCACAGTAGGCCTAGTGG...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCGCCTGGAGGATTAGGTaGCATCTGATCTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIAWRIR*HLILRR
Trigger: CCTCCTCAAGATCAGATGCCACCTAATCCTCCAGGC...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGAGCTCTAGCCAGCAGTaGTACAAGGCAGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILSSSQQ*YKAGRP
Trigger: AGGTCTGCCTGCCTTGTACCACTGCTGGCTAGAGCT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCCCTGGTTACATAGATaGGCACTGGGAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLPWLHR*ALGAPT
Trigger: AGTGGGAGCTCCCAGTGCCCATCTATGTAACCAGGG...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGTGCAGTTAGGAAACTaGGGACAGGCTGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCVQLGN*GQAATS
Trigger: ACTTGTGGCAGCCTGTCCTCAGTTTCCTAACTGCAC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCTTTGCCCTGATCTGGTaGCAGCACCAGGTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLFALIW*QHQVVE
Trigger: TTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAA...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCCAGTTCCTGTGTCCTaGTGCTCACCAACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLPVPVS*CSPTRA
Trigger: AGCTCTTGTTGGTGAGCAGCAGGACACAGGAACTGG...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAGAGGTGGTCTCCATTaGTGTCTACCAGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIRGGLH*CLPADL
Trigger: CAGATCTGCTGGTAGACAGCAATGGAGACCACCTCT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAATCCGAGCAGAGATaGGGTAGAGAGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILQSEQR*GREKGQ
Trigger: CTGACCCTTCTCTCTACCGCATCTCTGCTCGGATTG...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCATGTTGCCTCCTGTCTaGAGATACTGCCCATGGATG +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSMLPPV*RYCPWM
Trigger: CATCCATGGGCAGTATCTCCAGACAGGAGGCAACAT...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCTGGATAGGGCAAGGTTaGTCACCCACAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIWIGQG*SPTKTL
Trigger: CAGTGTCTTTGTGGGTGACCAACCTTGCCCTATCCA...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGTCTGGGGCATGGTGTaGCATATGATGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILVWGMV*HMMASG
Trigger: TCCTGAAGCCATCATATGCCACACCATGCCCCAGAC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGAGCAGTTTGTTCACTaGGGAATCCCGGCCCACTTT +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCEQFVH*GIPAHF
Trigger: AAAGTGGGCCGGGATTCCCCAGTGAACAAACTGCTC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGGCTCACAGTACAAGTaGGTAAGCGTCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCGSQYK*VSVSVF
Trigger: GAAGACACTGACGCTTACTCACTTGTACTGTGAGCC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTGTGCACCTGAGGAATaGGTACCACTGTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCCAPEE*VPLLLH
Trigger: ATGGAGCAACAGTGGTACTCATTCCTCAGGTGCACA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCACCAACAAGAGCTaGTTGGCATTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILLTNKS*LALSVS
Trigger: GCTCACTGACAATGCCAACCAGCTCTTGTTGGTGAG...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCTCTCCATATATACAGTaGCTACTCTGGGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLSPYIQ*LLWGHQ
Trigger: CTGGTGCCCCCAGAGTAGCCACTGTATATATGGAGA...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCCACCATCTTCCAGCATaGGAGTGTTCTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCHHLPA*ECSLQK
Trigger: CTTCTGGAGAGAACACTCCCATGCTGGAAGATGGTG...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAGTGTTGTAGGGTGTTaGGTCTCTTCCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWISVVGC*VSSSGF
Trigger: AAAACCACTGGAAGAGACTCAACACCCTACAACACT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGTGGTTTGGCTGGGCTaGCCGTCCACACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDVVWLG*PSTLAS
Trigger: AGAGGCGAGTGTGGACGGGCAGCCCAGCCAAACCAC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGCAAAGTCTACTTaGATGTTGTCTAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWILAKST*MLSRAK
Trigger: CTTTGCCCTAGACAACATGCAAGTAGACTTTGCCAG...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCTACTCAAGCTTGCTGTaGAGAGCCAGGGAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLYSSLL*RARESS
Trigger: ACTACTTTCCCTGGCTCTGCACAGCAAGCTTGAGTA...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCATTCAGAGTTCGTTTTaGCTTGCCTGTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCIQSSF*LACHSV
Trigger: GACGCTGTGACAGGCAAGGCAAAACGAACTCTGAAT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCTGGTATACCTGGCCATaGGAGCTGTTTAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLWYTWP*ELFRKT
Trigger: GGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCA...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGATAGATTTCAGGAATaGCCTTGGCTCGTGACCGTT +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCDRFQE*PWLVTV
Trigger: AACGGTCACGAGCCAAGGCCATTCCTGAAATCTATC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTCATATAGAGTCACATaGAGATCACCAGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSSYRVT*RSPALS
Trigger: GGACAATGCTGGTGATCTTCATGTGACTCTATATGA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGTCAAATACTCAAGCTTaGTGTGCAGAGCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILSNTQA*CAEPGK
Trigger: TTTCCCTGGCTCTGCACAGCAAGCTTGAGTATTTGA...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCTCTGGATCTTCAATaGCATGTTTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCSLDLQ*HVSLPA
Trigger: AGCTGGCAGAGAAACATGGCATTGAAGATCCAGAGA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCGTTGAAGCTGGTATTTaGTACAGAGAAGCGATGGAC +
Preference number: 4 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCVEAGI*YREAMD
Trigger: GTCCATCGCTTCTCTGTACCAAATACCAGCTTCAAC...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGGGGGCCCCACTTGCTaGGAATGGTATACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDGGPTC*EWYTWP
Trigger: TGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGACCTTCTCCTTGACTTaGGTGATGGTGTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILTFSLT*VMVSVS
Trigger: TGATACAGACACCATCACCCAAGTCAAGGAGAAGGT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGATGCTAAGAATGGCCTaGAAGGTGTCATCCACAAAC +
Preference number: 4 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILMLRMA*KVSSTN
Trigger: GTTTGTGGATGACACCTTCCAGGCCATTCTTAGCAT...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCACTCCACTGTTCCCTaGTGCCCTATCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDHSTVP*CPISLW
Trigger: CCAGAGGCTGATAGGGCAGCAGGGAACAGTGGAGTG...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATAGCTCAGGCTCCCATTaGCCGCCTGGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINSSGSH*PPGSGC
Trigger: GCAGCCACTGCCAGGCGGCCAATGGGAGCCTGAGCT...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAAAGCCCCTCGAGCCCTaGCTGCAGTGGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKKPLEP*LQWAAN
Trigger: GTTGGCTGCCCACTGCAGCCAGGGCTCGAGGGGCTT...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACTGCGGCAGGGTGCCTaGACCATTGGTGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKLRQGA*TIGGLR
Trigger: CCTCAACCCACCAATGGTTCAGGCACCCTGCCGCAG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAGAGAAGGGTCAGGGTTaGAGGGCTGGCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKEKGQG*RAGQPQ
Trigger: CTGTGGCTGGCCAGCCCTGCAACCCTGACCCTTCTC...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGGTACAGAGAAGCGATaGACCCTGGTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDGTEKR*TLVKGS
Trigger: GCTGCCTTTGACCAGGGTCCATCGCTTCTCTGTACC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAGGCCTGCGATGGGGCTaGGGGTGTGTTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKGLRWG*GCVHHH
Trigger: GTGGTGATGAACACACCCCCAGCCCCATCGCAGGCC...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCTTCTGCCTCCTCAGTaGCCTTTACCAGGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDLLPPQ*PLPGAR
Trigger: TCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAG...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATATCACCACAGGGGTATaGCTCGGGGGAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINITTGV*LGGVRR
Trigger: CCTCCTGACTCCCCCGAGTCATACCCCTGTGGTGAT...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATAGGAAGGCTATCGTGTaGCCATCTGTCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDRKAIV*PSVWRA
Trigger: TGCTCTCCAGACAGATGGGCACACGATAGCCTTCCT...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATACATCATTAAAGGCCTaGCCCAGGTTGGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDTSLKA*PRLEPR
Trigger: CCTGGGTTCCAACCTGGGCCAGGCCTTTAATGATGT...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTTCGCATCCTGGGCCTaGACCCCCAAGGCCTTTACT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINFASWA*TPKAFT
Trigger: AGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACAGGAGGAGGCTGGATaGGTTGACAGAGCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKQEEAG*VDRAER
Trigger: ACGCTCTGCTCTGTCAACTCATCCAGCCTCCTCCTG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGAGGCAGGTAGCTTTTaGAGTTTTCCAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDEAGSF*SFPGSS
Trigger: AGAGCTGCCTGGAAAACTGCAAAAGCTACCTGCCTC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGTGTGCCCATCTGTCTaGAGAGCAGCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINVCPSV*RAATAL
Trigger: CAGTGCAGTGGCTGCTCTCCAGACAGATGGGCACAC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGGAAGTATTCATCCATaGCCAGGGTGGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINGSIHP*PGWAAE
Trigger: CTCGGCTGCCCACCCTGGCCATGGATGAATACTTCC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTTCCACAGCACCTGGTaGGCACAAAGGCCCATAGCG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINFHSTW*AQRPIA
Trigger: CGCTATGGGCCTTTGTGCCCACCAGGTGCTGTGGAA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCCTCCACAGGAAAGGTaGACATCATGGACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDPPQER*TSWTLL
Trigger: AAGCAGAGTCCATGATGTCCACCTTTCCTGTGGAGG...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTGCACTGAAGGCCTCTaGGAGAAGGGGGTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINCTEGL*EKGVPL
Trigger: CAAGGGAACCCCCTTCTCCCAGAGGCCTTCAGTGCA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATATCTGCACCACAAACTaGGGCAGGGTGCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINICTTN*GRVPEP
Trigger: TGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGAT...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACCCACTTGCTGGGAATaGTATACCTGGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKPTCWE*YTWPWE
Trigger: CTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATAGGGGCTTGGGGTGGTaGCTCACAGTACAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINRGLGW*LTVQVS
Trigger: ACTCACTTGTACTGTGAGCCACCACCCCAAGCCCCT...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATTGCTCCTCTAAGGTGTaGATGAGTGTGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDCSSKV*MSVRRK
Trigger: CTTCCTTCTCACACTCATCCACACCTTAGAGGAGCA...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACTGTATCAAGCACCCTaGCTGGCACTCGATGCACTC +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKLYQAP*LALDAL
Trigger: GAGTGCATCGAGTGCCAGCCAGGGTGCTTGATACAG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGTCTGGCCCAGACTCTaGGAAACAGTGCCACCATTG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINVWPRL*ETVPPL
Trigger: CAATGGTGGCACTGTTTCCCAGAGTCTGGGCCAGAC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCGAGTACACCTTCCCTaGAGGATGCACCAACCACAT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINRVHLP*RMHQPH
Trigger: ATGTGGTTGGTGCATCCTTCAGGGAAGGTGTACTCG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGCATGGTGTGGCATATaGTGGCTTCAGGACACACAG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINAWCGI*WLQDTQ
Trigger: CTGTGTGTCCTGAAGCCATCATATGCCACACCATGC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCAGTCATCAAGTCTGTaGACTCCTTGCGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINQSSSL*TPCGTG
Trigger: ACCAGTGCCGCAAGGAGTTCACAGACTTGATGACTG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACCTCTAGGTCACTGGTaGGGTCTGTCATCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKPLGHW*GLSSQS
Trigger: TGACTGAGATGACAGACCTCACCAGTGACCTAGAGG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGTTCCTGTGTCCTGCTaGTCACCAACAAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINVPVSC*SPTRAG
Trigger: ACCAGCTCTTGTTGGTGAGCAGCAGGACACAGGAAC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTCAAGATCTAGGGAGTaGACTGAAGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINSRSRE*TEGLWE
Trigger: CTCCCAGAGGCCTTCAGTGCACTCCCTAGATCTTGA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTCACTCCCAGGGTATTaGCAGCCACAAACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINSLPGY*QPQTAH
Trigger: ATGGGCAGTTTGTGGCTGCCAATACCCTGGGAGTGA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTTATGTAGCTGGCCTTaGGTGTCTCCCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINLCSWP*VSPRKA
Trigger: AGCCTTCCTGGGAGACACCCAAGGCCAGCTACATAA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATAAGACCTTATGTAGCTaGCCTTGGGTGTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINKTLCS*PWVSPR
Trigger: CCTGGGAGACACCCAAGGCCAGCTACATAAGGTCTT...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCCAAGGCCTTTACTTTaGGCTCATCCTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINPRPLL*AHPPAT
Trigger: TGTGGCTGGAGGATGAGCCCAAAGTAAAGGCCTTGG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCTTCAGCTCAGGGCTaGGCTGAAAGAGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKSSAQG*AERGDS
Trigger: TGAATCACCTCTTTCAGCTCAGCCCTGAGCTGAAGA...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAGAGGAACAGACAGAATaGTCTGACCCTGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKEEQTE*SDPVPD
Trigger: GTCAGGAACAGGGTCAGATCATTCTGTCTGTTCCTC...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTGTCCACCTGGTACTTaGTGGCTCGGAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINCPPGT*WLGKAC
Trigger: ACATGCTTTTCCGAGCCATCAAGTACCAGGTGGACA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCTCTTCCAGTGGTTTTaGGTCACAGAGGTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINLFQWF*VTEVKS
Trigger: GGACTTGACCTCTGTGACTCAAAACCACTGGAAGAG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR TCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACCACCATTGTGCACCTaGGGAATGAGTACCACTGTT +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKPPLCT*GMSTTV
Trigger: AACAGTGGTACTCATTCCTCAGGTGCACAATGGTGG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATTTTGTCTTCCAAATGTaGAGGGTCTCTGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDFVFQM*RVSGSS
Trigger: TGAAGATCCAGAGACCCTGCACATTTGGAAGACAAA...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATGAAAAGCATGTACAGTaGCTCGCCAGCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINEKHVQ*LASHFL
Trigger: AAGGAAGTGGCTGGCGAGCCACTGTACATGCTTTTC...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CCA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCTCTTGATAGCTTGCTaGAGAGCTCTGGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: FQQANINTVGKRVGIIINLLIAC*RALANV
Trigger: GACATTCGCCAGAGCTCTCCAGCAAGCTATCAAGAG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR GCA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAAATGAGTACCACTGTTaGTCCATCTGGGACCTTATA +
Preference number: 4 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKNEYHC*SIWDLI
Trigger: TATAAGGTCCCAGATGGAGCAACAGTGGTACTCATT...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp CAGCCAGCTGGCGCACAGTTAGGGGTGGCACTCCTGCTGACAGCTTaGCTGCCAGGCCTCTGGCCACTAGCAGGAGGTCTCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: QPAGAQLGVALLLTA*LPGLWPLAGGLGLA
Trigger: TGCCAGGCCGAGACCTCCTGCTAGTGGCCAGAGGCCTGGCAGGCAAGCTGTCAGCAGGAGTGCCACCCCTAACTGTGCGCCAGCTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp GAGCCAGGCGCAGGTTGCCCATCTGCACCACAAACTGCGGCAGGGTaGCTGAACCATTGGTGGGTTGAGGGGCTTGGGGTGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: EPGAGCPSAPQTAAG*LNHWWVEGLGVVAH
Trigger: GTGAGCCACCACCCCAAGCCCCTCAACCCACCAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GGCTGGGCTGCCCGTCCACACTCGCCTCTCCGAGTACACCTTCCCTaGAGGATGCACCAACCACATAGTGGGTCCCTGGCCTGGAGACAG +
Preference number: 5 (lower is better)
Translates to: GWAARPHSPLRVHLP*RMHQPHSGSLAWRQ
Trigger: CTGTCTCCAGGCCAGGGACCCACTATGTGGTTGGTGCATCCTTCAGGGAAGGTGTACTCGGAGAGGCGAGTGTGGACGGGCAGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp ATATACAGTGGCTACTCTGGGGGCACCAGTGGCACCGCCACAGGCTaGTCACACAAGCGCGGCACGGGGCAGCCACTTCCAAGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: IYSGYSGGTSGTATG*SHKRGTGQPLPRPE
Trigger: TTCAGGCCTTGGAAGTGGCTGCCCCGTGCCGCGCTTGTGTGAGCAGCCTGTGGCGGTGCCACTGGTGCCCCCAGAGTAGCCACTGTATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TCGTTCTCGATCTCGGAGGCTGCTGCGCCGCACTTTGGCCCCTTCTaGCTCCTCAGTGGCCTTTACCAGGTGCCAGAGCCGAACTCCACC +
Preference number: 5 (lower is better)
Translates to: SFSISEAAAPHFGPF*LLSGLYQVPEPNST
Trigger: GGTGGAGTTCGGCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TCCCAACCCACAGGCACCAACTGGGGACTTGCTAGACCCTCAACCTaGGGGCAAGCCTCTGGGCCACGAACCAGGATGTCCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SQPTGTNWGLARPST*GQASGPRTRMSTSW
Trigger: CCAGGAGGTGGACATCCTGGTTCGTGGCCCAGAGGCTTGCCCCCAGGTTGAGGGTCTAGCAAGTCCCCAGTTGGTGCCTGTGGGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CTCGGAGGCTGCTGCGCCGCACTTTGGCCCCTTCTGCCTCCTCAGTaGCCTTTACCAGGTGCCAGAGCCGAACTCCACCTTCCTCACCAT +
Preference number: 5 (lower is better)
Translates to: LGGCCAALWPLLPPQ*PLPGARAELHLPHH
Trigger: ATGGTGAGGAAGGTGGAGTTCGGCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GTGACCGTTCTCGTTCTCGATCTCGGAGGCTGCTGCGCCGCACTTTaGCCCCTTCTGCCTCCTCAGTGGCCTTTACCAGGTGCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: VTVLVLDLGGCCAAL*PLLPPQWPLPGARA
Trigger: GGCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GCAGCAGGGGCACCACAGCTCCTCCTTGGGTTCGCATCCTGGGCCTaGACCCCCAAGGCCTTTACTTTGGGCTCATCCTCCAGCCACACA +
Preference number: 5 (lower is better)
Translates to: AAGAPQLLLGFASWA*TPKAFTLGSSSSHT
Trigger: TGTGTGGCTGGAGGATGAGCCCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TGGCCTTGGCTCGTGACCGTTCTCGTTCTCGATCTCGGAGGCTGCTaGGCCGCACTTTGGCCCCTTCTGCCTCCTCAGTGGCCTTTACCA +
Preference number: 5 (lower is better)
Translates to: WPWLVTVLVLDLGGC*AALWPLLPPQWPLP
Trigger: TGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCACGAGCCAAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CCATGCCCAGGCCCAACTGGGCCTCCACAGGAAAGGTGGACATCATaGACTCTGCTTCGTACTGGACAGGGCCTAGAGCCAGGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PCPGPTGPPQERWTS*TLLRTGQGLEPGAG
Trigger: ACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAGCAGAGTCCATGATGTCCACCTTTCCTGTGGAGGCCCAGTTGGGCCTGGGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TCCCAGGAAGGCTATCGTGTGCCCATCTGTCTGGAGAGCAGCCACTaGACTGATGGACTGTCCCAGTTGCAGCAGAGGCTGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SQEGYRVPICLESSH*TDGLSQLQQRLGLQ
Trigger: CTGGAGGCCCAGCCTCTGCTGCAACTGGGACAGTCCATCAGTGCAGTGGCTGCTCTCCAGACAGATGGGCACACGATAGCCTTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TGGACTCTGCTTCGTACTGGACAGGGCCTAGAGCCAGGCGCAGGTTaGCCATCTGCACCACAAACTGCGGCAGGGTGCCTGAACCATTGG +
Preference number: 5 (lower is better)
Translates to: WTLLRTGQGLEPGAG*PSAPQTAAGCLNHW
Trigger: CCAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAGCAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp CGCCGCACTTTGGCCCCTTCTGCCTCCTCAGTGGCCTTTACCAGGTaGCAGAGCCGAACTCCACCTTCCTCACCATCTTCCAGCATGGGA +
Preference number: 5 (lower is better)
Translates to: RRTLAPSASSVAFTR*QSRTPPSSPSSSMG
Trigger: TCCCATGCTGGAAGATGGTGAGGAAGGTGGAGTTCGGCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp GAATGGCCTTGGCTCGTGACCGTTCTCGTTCTCGATCTCGGAGGCTaGTGCGCCGCACTTTGGCCCCTTCTGCCTCCTCAGTGGCCTTTA +
Preference number: 5 (lower is better)
Translates to: EWPWLVTVLVLDLGG*CAALWPLLPPQWPL
Trigger: TAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCACGAGCCAAGGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CTAGCAGGAGGTCTCGGCCTGGCAAGGGCACCACTAGGCCTACTGTaGTCACTCCCAGGGTATTGGCAGCCACAAACTGCCCATCACCAG +
Preference number: 5 (lower is better)
Translates to: LAGGLGLARAPLGLL*SLPGYWQPQTAHHQ
Trigger: CTGGTGATGGGCAGTTTGTGGCTGCCAATACCCTGGGAGTGACCACAGTAGGCCTAGTGGTGCCCTTGCCAGGCCGAGACCTCCTGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GATACAGGCCTGAGGATCTGCAGCAGGGGCACCACAGCTCCTCCTTaGGTTCGCATCCTGGGCCTGAACCCCCAAGGCCTTTACTTTGGG +
Preference number: 5 (lower is better)
Translates to: DTGLRICSRGTTAPP*VRILGLNPQGLYFG
Trigger: CCCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAGGCCTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TGGCACTCGATGCACTCCACTGTTCCCTGCTGCCCTATCAGCCTCTaGTCCCACCAGTGCCATCAGGGTCAGGGGCTGGAACTCCACATC +
Preference number: 5 (lower is better)
Translates to: WHSMHSTVPCCPISL*SHQCHQGQGLELHI
Trigger: GATGTGGAGTTCCAGCCCCTGACCCTGATGGCACTGGTGGGACCAGAGGCTGATAGGGCAGCAGGGAACAGTGGAGTGCATCGAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CTGGCAAGGGCACCACTAGGCCTACTGTGGTCACTCCCAGGGTATTaGCAGCCACAAACTGCCCATCACCAGGGTCCTCAGCCTGGTACA +
Preference number: 5 (lower is better)
Translates to: LARAPLGLLWSLPGY*QPQTAHHQGPQPGT
Trigger: TGTACCAGGCTGAGGACCCTGGTGATGGGCAGTTTGTGGCTGCCAATACCCTGGGAGTGACCACAGTAGGCCTAGTGGTGCCCTTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TTTTCACCCTCTGGGCAGTGCTCTCCATATATACAGTGGCTACTCTaGGGGCACCAGTGGCACCGCCACAGGCTGCTCACACAAGCGCGG +
Preference number: 5 (lower is better)
Translates to: FSPSGQCSPYIQWLL*GHQWHRHRLLTQAR
Trigger: CCGCGCTTGTGTGAGCAGCCTGTGGCGGTGCCACTGGTGCCCCCAGAGTAGCCACTGTATATATGGAGAGCACTGCCCAGAGGGTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GAGGTGGTCTCCATTGCTGTCTACCAGCAGATCTGGACTGATGGCTaGGCCTGGGGGCCCCACTTGCTGGGAATGGTATACCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: EVVSIAVYQQIWTDG*AWGPHLLGMVYLAM
Trigger: CATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGGTAGACAGCAATGGAGACCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp AGTATTCATCCATGGCCAGGGTGGGCAGCCGAGGAACAGACAGAATaGTCTGACCCTGTTCCTGACGGGGGTGTTGGGCTGGTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SIHPWPGWAAEEQTE*SDPVPDGGVGLVAG
Trigger: GCCTGCTACCAGCCCAACACCCCCGTCAGGAACAGGGTCAGATCATTCTGTCTGTTCCTCGGCTGCCCACCCTGGCCATGGATGAATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TCCTTGGGTTCGCATCCTGGGCCTGAACCCCCAAGGCCTTTACTTTaGGCTCATCCTCCAGCCACACAGACAGCAAGGGCTGCCACACAA +
Preference number: 5 (lower is better)
Translates to: SLGSHPGPEPPRPLL*AHPPATQTARAATQ
Trigger: TTGTGTGGCAGCCCTTGCTGTCTGTGTGGCTGGAGGATGAGCCCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GCCCTATCAGCCTCTGGTCCCACCAGTGCCATCAGGGTCAGGGGCTaGAACTCCACATCCTCTCGTAGCAGGTGGCTGTCATTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ALSASGPTSAIRVRG*NSTSSRSRWLSFRV
Trigger: AACTCTGAATGACAGCCACCTGCTACGAGAGGATGTGGAGTTCCAGCCCCTGACCCTGATGGCACTGGTGGGACCAGAGGCTGATAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GCCACAAACTGCCCATCACCAGGGTCCTCAGCCTGGTACAACACTTaGGTCACATCCCCAAGGCGCCGCTTCTCACATACACCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ATNCPSPGSSAWYNT*VTSPRRRFSHTPCF
Trigger: GAAGCAGGGTGTATGTGAGAAGCGGCGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGCTGAGGACCCTGGTGATGGGCAGTTTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp CATAGTGGGTCCCTGGCCTGGAGACAGGTAGTGCAGTTAGGAAACTaGGGACAGGCTGCCACAAGTATCCGGTCTACCTGCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: HSGSLAWRQVVQLGN*GQAATSIRSTCWAV
Trigger: GACTGCCCAGCAGGTAGACCGGATACTTGTGGCAGCCTGTCCTCAGTTTCCTAACTGCACTACCTGTCTCCAGGCCAGGGACCCACTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GCTCACCAACAAGAGCTGGTTGGCATTGTCAGTGAGCTGGGCCTGTaGGCACTCAGCCAGGTCACGGAAAGGCACACAATCAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: AHQQELVGIVSELGL*ALSQVTERHTIRTV
Trigger: GACAGTCCTGATTGTGTGCCTTTCCGTGACCTGGCTGAGTGCCCACAGGCCCAGCTCACTGACAATGCCAACCAGCTCTTGTTGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TGCAGAGCCAGGGAAAGTAGTGAAGCCACATGGCAGCGGTCCCGCTaGGAGAAGCTTGGCTGCTCCTCTAAGGTGTGGATGAGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: CRARESSEATWQRSR*EKLGCSSKVWMSVR
Trigger: TCTCACACTCATCCACACCTTAGAGGAGCAGCCAAGCTTCTCCCAGCGGGACCGCTGCCATGTGGCTTCACTACTTTCCCTGGCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCCACAGCCAGTGGTTaGGCTGGGCTGCCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCSTASG*AGLPVH
Trigger: GTGGACGGGCAGCCCAGCCAAACCACTGGCTGTGGA...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCCTGCTGCGCCGCACTTaGGCCCCTTCTGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCLLRRT*APSASS
Trigger: TGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAG...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp AGCGTGGAACACTGTAGTAAGCCACTCTCAAGATGGATACAGGCCTaGGGATCTGCAGCAGGGGCACCACAGCTCCTCCTTGGGTTCGCA +
Preference number: 5 (lower is better)
Translates to: SVEHCSKPLSRWIQA*GSAAGAPQLLLGFA
Trigger: TGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAGGCCTGTATCCATCTTGAGAGTGGCTTACTACAGTGTTCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TCTACCAGCAGATCTGGACTGATGGCTGAGCCTGGGGGCCCCACTTaGTGGGAATGGTATACCTGGCCATGGGAGCTGTTTAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: STSRSGLMAEPGGPT*WEWYTWPWELFRKT
Trigger: GGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp AGGCCAGAGTCCCTGGATGTCTCCTCTAAGGAGGCAGGTAGCTTTTaGAGTTTTCCAGGCAGCTCTAGCCAGCAGTGGTACAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RPESLDVSSKEAGSF*SFPGSSSQQWYKAG
Trigger: GCCTGCCTTGTACCACTGCTGGCTAGAGCTGCCTGGAAAACTGCAAAAGCTACCTGCCTCCTTAGAGGAGACATCCAGGGACTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp AGTAGTGAAGCCACATGGCAGCGGTCCCGCTGGGAGAAGCTTGGCTaGTCCTCTAAGGTGTGGATGAGTGTGAGAAGGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSEATWQRSRWEKLG*SSKVWMSVRRKSLL
Trigger: CAGCAAGCTCTTCCTTCTCACACTCATCCACACCTTAGAGGAGCAGCCAAGCTTCTCCCAGCGGGACCGCTGCCATGTGGCTTCACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TTTGCCCTGATCTGGTGCCAGCACCAGGTGGTTGAAGCTGGTATTTaGTACAGAGAAGCGATGGACCCTGGTCAAAGGCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: FALIWCQHQVVEAGI*YREAMDPGQRQQRQ
Trigger: CTGCCGCTGCTGCCTTTGACCAGGGTCCATCGCTTCTCTGTACCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GCTGAGCCTGGGGGCCCCACTTGCTGGGAATGGTATACCTGGCCATaGGAGCTGTTTAGAAAGACCTTATGTAGCTGGCCTTGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: AEPGGPTCWEWYTWP*ELFRKTLCSWPWVS
Trigger: AGACACCCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CTGATGGCTGAGCCTGGGGGCCCCACTTGCTGGGAATGGTATACCTaGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGCTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LMAEPGGPTCWEWYT*PWELFRKTLCSWPW
Trigger: CCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CAGGATGTCCACCTCCTGGGCACTGTAGACAGCCTTTTCACCCTCTaGGCAGTGCTCTCCATATATACAGTGGCTACTCTGGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: QDVHLLGTVDSLFTL*AVLSIYTVATLGAP
Trigger: TGGTGCCCCCAGAGTAGCCACTGTATATATGGAGAGCACTGCCCAGAGGGTGAAAAGGCTGTCTACAGTGCCCAGGAGGTGGACATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp GGCTGGCCAGCCACAGTTACAGCATTTCGCACATCATTAAAGGCCTaGCCCAGGTTGGAACCCAGGATGGTGATGGCCAAGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: GWPATVTAFRTSLKA*PRLEPRMVMAKPPS
Trigger: AGAAGGTGGCTTGGCCATCACCATCCTGGGTTCCAACCTGGGCCAGGCCTTTAATGATGTGCGAAATGCTGTAACTGTGGCTGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGATGGACTGTCCCAGTaGCAGCAGAGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILDGLSQ*QQRLGL
Trigger: GAGGCCCAGCCTCTGCTGCAACTGGGACAGTCCATC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAGAGAAGGGTCAGGGTaGCAGGGCTGGCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCREGSG*QGWPAT
Trigger: TGTGGCTGGCCAGCCCTGCAACCCTGACCCTTCTCT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAGAGCCAGGCGCAGGTaGCCCATCTGCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIRARRR*PICTTN
Trigger: GTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp AGACATAGAGGTGGTCTCCATTGCTGTCTACCAGCAGATCTGGACTaGTGGCTGAGCCTGGGGGCCCCACTTGCTGGGAATGGTATACCT +
Preference number: 5 (lower is better)
Translates to: RHRGGLHCCLPADLD*WLSLGAPLAGNGIP
Trigger: AGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGGTAGACAGCAATGGAGACCACCTCTATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp AGACTCCATCTTCAGCTCAGGGCTGAGCTGAAAGAGGTGATTCACTaGACCCACGTAGAGTTTGCCCTGATCTGGTGCCAGCACCAGGTG +
Preference number: 5 (lower is better)
Translates to: RLHLQLRAELKEVIH*THVEFALIWCQHQV
Trigger: CACCTGGTGCTGGCACCAGATCAGGGCAAACTCTACGTGGGTGCAGTGAATCACCTCTTTCAGCTCAGCCCTGAGCTGAAGATGGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp GCCTTTACTTTGGGCTCATCCTCCAGCCACACAGACAGCAAGGGCTaGCACACAACGTCTAAGCCTGTACCCCTGACTCGAATCACTCGT +
Preference number: 5 (lower is better)
Translates to: AFTLGSSSSHTDSKG*HTTSKPVPLTRITR
Trigger: ACGAGTGATTCGAGTCAGGGGTACAGGCTTAGACGTTGTGTGGCAGCCCTTGCTGTCTGTGTGGCTGGAGGATGAGCCCAAAGTAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp ACATGCCCAAAGACTATGAGGACCACTGCTTCTCCTGGCTCAGTCTaGGGCATGGTGTGGCATATGATGGCTTCAGGACACACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TCPKTMRTTASPGSV*GMVWHMMASGHTGS
Trigger: GGAGCCTGTGTGTCCTGAAGCCATCATATGCCACACCATGCCCCAGACTGAGCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp AGGTCTGTCATCTCAGTCATCAAGTCTGTGAACTCCTTGCGGCACTaGTCACCCACACCAGTCTCCAGGTTCTCCAACTGCACCAGCACC +
Preference number: 5 (lower is better)
Translates to: RSVISVIKSVNSLRH*SPTPVSRFSNCTST
Trigger: GGTGCTGGTGCAGTTGGAGAACCTGGAGACTGGTGTGGGTGACCAGTGCCGCAAGGAGTTCACAGACTTGATGACTGAGATGACAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCCCGCCTGTGCCTGACTaGTGCCTGCTGAAAATGCAC +
Preference number: 5 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSPPVPD*CLLKMH
Trigger: GTGCATTTTCAGCAGGCACAAGTCAGGCACAGGCGG...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp CACCCACGTAGAGTTTGCCCTGATCTGGTGCCAGCACCAGGTGGTTaGAGCTGGTATTTGGTACAGAGAAGCGATGGACCCTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HPRRVCPDLVPAPGG*SWYLVQRSDGPWSK
Trigger: CTTTGACCAGGGTCCATCGCTTCTCTGTACCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAACTCTACGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp CATCTGGCACTGCTGGACTGTGGCACAGGAGGAGGCTGGATGAGTTaGCAGAGCAGAGCGTGGAACACTGTAGTAAGCCACTCTCAAGAT +
Preference number: 5 (lower is better)
Translates to: HLALLDCGTGGGWMS*QSRAWNTVVSHSQD
Trigger: ATCTTGAGAGTGGCTTACTACAGTGTTCCACGCTCTGCTCTGTCAACTCATCCAGCCTCCTCCTGTGCCACAGTCCAGCAGTGCCAGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TGGTATAGGAATCCCTGGCCCCCACTAGCACTGGCAAAGTCTACTTaGATGTTGTCTAGGGCAAAGAAGACTCGCTTTGGGAGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: WYRNPWPPLALAKST*MLSRAKKTRFGRAP
Trigger: TGGGGCCCTCCCAAAGCGAGTCTTCTTTGCCCTAGACAACATGCAAGTAGACTTTGCCAGTGCTAGTGGGGGCCAGGGATTCCTATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp ACCTGGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGCTGGCCTTaGGTGTCTCCCAGGAAGGCTATCGTGTGCCCATCTGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: TWPWELFRKTLCSWP*VSPRKAIVCPSVWR
Trigger: TCTCCAGACAGATGGGCACACGATAGCCTTCCTGGGAGACACCCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp AGATCTGGACTGATGGCTGAGCCTGGGGGCCCCACTTGCTGGGAATaGTATACCTGGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGC +
Preference number: 5 (lower is better)
Translates to: RSGLMAEPGGPTCWE*YTWPWELFRKTLCS
Trigger: GCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp AAGTTCTGGGTTGAGATGCCAGGAGGACGACTCTTAATGGCCACTTaGACTGGCCCAGCAGTGCCATTGGGAGCAGGAGATGTCACACAT +
Preference number: 5 (lower is better)
Translates to: KFWVEMPGGRLLMAT*TGPAVPLGAGDVTH
Trigger: ATGTGTGACATCTCCTGCTCCCAATGGCACTGCTGGGCCAGTCCAAGTGGCCATTAAGAGTCGTCCTCCTGGCATCTCAACCCAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAAGAGCTGGTTGGCATaGTCAGTGAGCTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIKSWLA*SVSWAC
Trigger: ACAGGCCCAGCTCACTGACAATGCCAACCAGCTCTT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAGGAGGCTGGATGAGTaGACAGAGCAGAGCGTGGAA +
Preference number: 5 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIRRLDE*TEQSVE
Trigger: TTCCACGCTCTGCTCTGTCAACTCATCCAGCCTCCT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCACCTGCACCTCCTCCTaGCTGATCCCCAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCTCTSS*LIPRLR
Trigger: CCTCAATCTGGGGATCAGCAAGGAGGAGGTGCAGGT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GGCCCAGACTCTGGGAAACAGTGCCACCATTGTGCACCTGAGGAATaGGTACCACTGTTGCTCCATCTGGGACCTTATAGTGTTGTAGGG +
Preference number: 5 (lower is better)
Translates to: GPDSGKQCHHCAPEE*VPLLLHLGPYSVVG
Trigger: CCCTACAACACTATAAGGTCCCAGATGGAGCAACAGTGGTACTCATTCCTCAGGTGCACAATGGTGGCACTGTTTCCCAGAGTCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TGGTATACCTGGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGCTaGCCTTGGGTGTCTCCCAGGAAGGCTATCGTGTGCCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: WYTWPWELFRKTLCS*PWVSPRKAIVCPSV
Trigger: GACAGATGGGCACACGATAGCCTTCCTGGGAGACACCCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CCACTTCCAAGGCCTGAACAGCACTGCAGTCATAGAAGGAGAATGTaGTGGCGGTCAATACCACATCCTCAAACATTAGGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PLPRPEQHCSHRRRM*WRSIPHPQTLGPGA
Trigger: TGCCCCTGGCCCTAATGTTTGAGGATGTGGTATTGACCGCCACCACATTCTCCTTCTATGACTGCAGTGCTGTTCAGGCCTTGGAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAAGTCTGTGAACTCCTaGCGGCACTGGTCACCCACA +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCKSVNS*RHWSPT
Trigger: TGTGGGTGACCAGTGCCGCAAGGAGTTCACAGACTT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 90 bp TTGGCTGTGTATCGAAAAGGGGTGGTGAGCAGTTTGCGTTCAACATaGCCAAAGACTATGAGGACCACTGCTTCTCCTGGCTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LAVYRKGVVSSLRST*PKTMRTTASPGSVW
Trigger: CCAGACTGAGCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGTTGAACGCAAACTGCTCACCACCCCTTTTCGATACACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp CATATGATGGCTTCAGGACACACAGGCTCCTGGATAGGGCAAGGTTaGTCACCCACAAAGACACTGATGTTGCCTCCTGTCTGGAGATAC +
Preference number: 5 (lower is better)
Translates to: HMMASGHTGSWIGQG*SPTKTLMLPPVWRY
Trigger: GTATCTCCAGACAGGAGGCAACATCAGTGTCTTTGTGGGTGACCAACCTTGCCCTATCCAGGAGCCTGTGTGTCCTGAAGCCATCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp TTTGCGTTCAACATGCCCAAAGACTATGAGGACCACTGCTTCTCCTaGCTCAGTCTGGGGCATGGTGTGGCATATGATGGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: FAFNMPKDYEDHCFS*LSLGHGVAYDGFRT
Trigger: TGTCCTGAAGCCATCATATGCCACACCATGCCCCAGACTGAGCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGTTGAACGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGGCCAGCACCAGGTGGTaGAAGCTGGTATTTGGTACA +
Preference number: 5 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILASTRW*KLVFGT
Trigger: TGTACCAAATACCAGCTTCAACCACCTGGTGCTGGC...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCAAGGCAGGCAGACCTaGGAAATAGTGAAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIQGRQT*EIVKVL
Trigger: CAGAACCTTCACTATTTCCAAGGTCTGCCTGCCTTG...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCAGCTCAGGCTCCCATaGGCCGCCTGGCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDQLRLP*AAWQWL
Trigger: CAGCCACTGCCAGGCGGCCAATGGGAGCCTGAGCTG...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTCATCTCTTGATAGCTaGCTGGAGAGCTCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSSSLDS*LESSGE
Trigger: TTCGCCAGAGCTCTCCAGCAAGCTATCAAGAGATGA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCACAGGTCAGTCACTTaGTATTCCACCAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILHRSVT*YSTKAA
Trigger: GGCTGCCTTGGTGGAATACAAAGTGACTGACCTGTG...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 90 bp AGTAAGGAAGGCAGCCTGGATAAGGCCCTGGCCATGGCAGGTAAGTaGCATTTCCACATAGGAATAAAGGTTGACATCTCTGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SKEGSLDKALAMAGK*HFHIGIKVDISEAD
Trigger: GTCTGCCTCAGAGATGTCAACCTTTATTCCTATGTGGAAATGCCACTTACCTGCCATGGCCAGGGCCTTATCCAGGCTGCCTTCCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTTGCTGTTGAGCAAATaGGAGAGTTGTGTGAGACCC +
Preference number: 5 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSLLLSK*ESCVRP
Trigger: GGGTCTCACACAACTCTCCAATTTGCTCAACAGCAA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCATTCAGAGTTCGTTTaGCCTTGCCTGTCACAGCGT +
Preference number: 5 (lower is better)
Translates to: PPQSLLSQGHKVLWWWILHSEFV*PCLSQR
Trigger: ACGCTGTGACAGGCAAGGCAAAACGAACTCTGAATG...CAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTCTCTTCCAGTGGTTTaGAGTCACAGAGGTCAAGTC +
Preference number: 5 (lower is better)
Translates to: PLLSHCLVRVIRYFGGGSSLPVV*SHRGQV
Trigger: GACTTGACCTCTGTGACTCAAAACCACTGGAAGAGA...GGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCTCGGTTCCCTTGTAGATTaGGTCCAACACCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PQSLLSQGHKVLWWWILLGSLVD*VQHLLL
Trigger: AAGGAGAAGGTGTTGGACCAAATCTACAAGGGAACC...GAGCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CCCCCTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCAAGATGGCATCCTCGTaGTCTGACACTTGTACATCA +
Preference number: 5 (lower is better)
Translates to: PPPQSLLSQGHKVLWWWIKMASS*SDTCTS
Trigger: TGATGTACAAGTGTCAGACAACGAGGATGCCATCTT...GATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGGCCCAGCAGTGCCATaGGGAGCAGGAGATGTCACA +
Preference number: 5 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDGPAVP*GAGDVT
Trigger: TGTGACATCTCCTGCTCCCAATGGCACTGCTGGGCC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GTACCACTGTTGCTCCATCTGGGACCTTATAGTGTTGTAGGGTGTTaGGTCTCTTCCAGTGGTTTTGAGTCACAGAGGTCAAGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: VPLLLHLGPYSVVGC*VSSSGFESQRSSPH
Trigger: ATGAGGACTTGACCTCTGTGACTCAAAACCACTGGAAGAGACTCAACACCCTACAACACTATAAGGTCCCAGATGGAGCAACAGTGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAACTCCTGCTGACAGCTaGCCTGCCAGGCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKTPADS*PARPLA
Trigger: GGCCAGAGGCCTGGCAGGCAAGCTGTCAGCAGGAGT...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp CTCCTCAGTCACTGCTTAGTCAGGGTCATAAGGTACTTTGGTGGTGGATCCTGCAAGTCTACTTGCATGTaGTCTAGGGCAAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: LLSHCLVRVIRYFGGGSCKSTCM*SRAKKT
Trigger: AGTCTTCTTTGCCCTAGACAACATGCAAGTAGACTT...GCAGGATCCACCACCAAAGTACCTTATGACCCTGACTAAGCAGTGACTGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCTCTGCTTCCACCAGTaGGGGATTGGCTGTGTATCG +
Preference number: 5 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDLCFHQ*GIGCVS
Trigger: CGATACACAGCCAATCCCCAACTGGTGGAAGCAGAG...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGAGCAAATTGGAGAGTaGTGTGAGACCCTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDEQIGE*CETLAH
Trigger: GTGCGCCAGGGTCTCACACAACTCTCCAATTTGCTC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTGCTGATCCCCAGATaGAGGCCCTCGCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKLLIPR*RPSPST
Trigger: TGTGGAGGGCGAGGGCCTCAATCTGGGGATCAGCAA...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 90 bp GATGAAAGTCTGTGCAATGACAGCCAAGATGGCATCCTCGTTGTCTaGCACTTGTACATCAAAGATGAGCTGTGGGTTCTTCAAGACATT +
Preference number: 5 (lower is better)
Translates to: DESLCNDSQDGILVV*HLYIKDELWVLQDI
Trigger: AATGTCTTGAAGAACCCACAGCTCATCTTTGATGTACAAGTGTCAGACAACGAGGATGCCATCTTGGCTGTCATTGCACAGACTTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAGTCACTCCCAGGGTATaGGCAGCCACAAACTGCCCA +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKVTPRV*AATNCP
Trigger: TGGGCAGTTTGTGGCTGCCAATACCCTGGGAGTGAC...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp AGGTGTGATTTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATGTCAAATACTCAAGCTaGCTGTGCAGAGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RCDFPASKYKYSGKEGRDVKYSS*LCRARE
Trigger: TTCCCTGGCTCTGCACAGCAAGCTTGAGTATTTGAC...ATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAAATCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAAGCCTGGTACAACACTaGAGTCACATCCCCAAGGCG +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKSLVQH*SHIPKA
Trigger: CGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGCT...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTCTCGCAAGGCCTTCTaGCTCTTGTGCCTGTACATG +
Preference number: 5 (lower is better)
Translates to: FQQANINTVGKRVGIIINSRKAF*LLCLYM
Trigger: CATGTACAGGCACAAGAGCAAGAAGGCCTTGCGAGA...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAACAGATAGATAGCCAGTaGGTGAGCAGCTTCTCTACC +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKQIDSQ*VSSFST
Trigger: GGTAGAGAAGCTGCTCACCAACTGGCTATCTATCTG...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATTGTCCACCTGGTACTaGATGGCTCGGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKLSTWY*MARKSM
Trigger: CATGCTTTTCCGAGCCATCAAGTACCAGGTGGACAA...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAATCACCTTCTCCTTGACTaGGGTGATGGTGTCTGTATC +
Preference number: 5 (lower is better)
Translates to: FQQANINTVGKRVGIIINHLLLD*GDGVCI
Trigger: GATACAGACACCATCACCCAAGTCAAGGAGAAGGTG...ATTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS-3UTR CAA 90 bp TTTCCAGCAAGCAAATATAAATACAGTGGGAAAGAGGGTAGGGATCATTATAAAACAAAGACACTGATGTaGCCTCCTGTCTGGAGATAC +
Preference number: 5 (lower is better)
Translates to: FPASKYKYSGKEGRDHYKTKTLM*PPVWRY
Trigger: GTATCTCCAGACAGGAGGCAACATCAGTGTCTTTGT...TTTATAATGATCCCTACCCTCTTTCCCACTGTATTTATATTTGCTTGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp GGCTACTCTGGGGGCACCAGTGGCACCGCCACAGGCTaGTCACACAAGCGCGGCACGGGGCAGCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: GYSGGTSGTATG*SHKRGTGQPLP
Trigger: TGGAAGTGGCTGCCCCGTGCCGCGCTTGTGTGAGCAGCCTGTGGCGGTGCCACTGGTGCCCCCAGAGTAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GTGGCACTCCTGCTGACAGCTTGCCTGCCAGGCCTCTaGCCACTAGCAGGAGGTCTCGGCCTGGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: VALLLTACLPGL*PLAGGLGLARA
Trigger: TGCCCTTGCCAGGCCGAGACCTCCTGCTAGTGGCCAGAGGCCTGGCAGGCAAGCTGTCAGCAGGAGTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp ACTGCACTGATGGACTGTCCCAGTTGCAGCAGAGGCTaGGCCTCCAGGGGTTGGCGGCCTGCGATGGGGCTG +
Preference number: 6 (lower is better)
Translates to: TALMDCPSCSRG*ASRGWRPAMGL
Trigger: CAGCCCCATCGCAGGCCGCCAACCCCTGGAGGCCCAGCCTCTGCTGCAACTGGGACAGTCCATCAGTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp ATCTCGGAGGCTGCTGCGCCGCACTTTGGCCCCTTCTaGCTCCTCAGTGGCCTTTACCAGGTGCCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: ISEAAAPHFGPF*LLSGLYQVPEP
Trigger: CGGCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGCCCCTCGAGCCCTGGCTGCAGTGGGCAGCCAACATaGCCGGGGAAGAAGGCACGCTCAGCATATGTTCGG +
Preference number: 6 (lower is better)
Translates to: SPSSPGCSGQPT*PGKKARSAYVR
Trigger: CCGAACATATGCTGAGCGTGCCTTCTTCCCCGGCCATGTTGGCTGCCCACTGCAGCCAGGGCTCGAGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp CCTGAGGATCTGCAGCAGGGGCACCACAGCTCCTCCTaGGGTTCGCATCCTGGGCCTGAACCCCCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: PEDLQQGHHSSS*GSHPGPEPPRP
Trigger: AGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CTTCGTACTGGACAGGGCCTAGAGCCAGGCGCAGGTTaGCCATCTGCACCACAAACTGCGGCAGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: LRTGQGLEPGAG*PSAPQTAAGCL
Trigger: CAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CTCGTGACCGTTCTCGTTCTCGATCTCGGAGGCTGCTaGGCCGCACTTTGGCCCCTTCTGCCTCCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: LVTVLVLDLGGC*AALWPLLPPQW
Trigger: CCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TGGCTCGTGACCGTTCTCGTTCTCGATCTCGGAGGCTaGTGCGCCGCACTTTGGCCCCTTCTGCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: WLVTVLVLDLGG*CAALWPLLPPQ
Trigger: CTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCACGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp ACACTGATGTTGCCTCCTGTCTGGAGATACTGCCCATaGATGGTGAGCTGGGTGCCCCCTGCCTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TLMLPPVWRYCP*MVSWVPPAWGP
Trigger: GGGCCCCCAGGCAGGGGGCACCCAGCTCACCATCCATGGGCAGTATCTCCAGACAGGAGGCAACATCAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp CTGAGGATCTGCAGCAGGGGCACCACAGCTCCTCCTTaGGTTCGCATCCTGGGCCTGAACCCCCAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LRICSRGTTAPP*VRILGLNPQGL
Trigger: AAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp GGCAGTGGTTGTCTTCGTAGCTCCACAGCCAGTGGTTaGGCTGGGCTGCCCGTCCACACTCGCCTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GSGCLRSSTASG*AGLPVHTRLSE
Trigger: CTCGGAGAGGCGAGTGTGGACGGGCAGCCCAGCCAAACCACTGGCTGTGGAGCTACGAAGACAACCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp GCTTCGTACTGGACAGGGCCTAGAGCCAGGCGCAGGTaGCCCATCTGCACCACAAACTGCGGCAGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: ASYWTGPRARRR*PICTTNCGRVP
Trigger: AGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp CGTGACCGTTCTCGTTCTCGATCTCGGAGGCTGCTGCGCCGCACTTaGGCCCCTTCTGCCTCCTCAGTGGCCTTTACCAGGTGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: RDRSRSRSRRLLRRT*APSASSVAFTRCQS
Trigger: GCTCTGGCACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGAACGGTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp GCCCGTCCACACTCGCCTCTCCGAGTACACCTTCCCTaGAGGATGCACCAACCACATAGTGGGTCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: ARPHSPLRVHLP*RMHQPHSGSLA
Trigger: GGCCAGGGACCCACTATGTGGTTGGTGCATCCTTCAGGGAAGGTGTACTCGGAGAGGCGAGTGTGGACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp CCATGGCCAGGGTGGGCAGCCGAGGAACAGACAGAATaGTCTGACCCTGTTCCTGACGGGGGTGTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: PWPGWAAEEQTE*SDPVPDGGVGL
Trigger: CAGCCCAACACCCCCGTCAGGAACAGGGTCAGATCATTCTGTCTGTTCCTCGGCTGCCCACCCTGGCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp GCAGGTTGCCCATCTGCACCACAAACTGCGGCAGGGTaGCTGAACCATTGGTGGGTTGAGGGGCTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: AGCPSAPQTAAG*LNHWWVEGLGV
Trigger: CACCCCAAGCCCCTCAACCCACCAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TGGACAGGGCCTAGAGCCAGGCGCAGGTTGCCCATCTaGACCACAAACTGCGGCAGGGTGCCTGAACCATTG +
Preference number: 6 (lower is better)
Translates to: WTGPRARRRLPI*TTNCGRVPEPL
Trigger: CAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CCTGGCTGGCACTCGATGCACTCCACTGTTCCCTGCTaGCCTATCAGCCTCTGGTCCCACCAGTGCCATCAG +
Preference number: 6 (lower is better)
Translates to: PGWHSMHSTVPC*PISLWSHQCHQ
Trigger: CTGATGGCACTGGTGGGACCAGAGGCTGATAGGGCAGCAGGGAACAGTGGAGTGCATCGAGTGCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CACCCTGGCTGGCACTCGATGCACTCCACTGTTCCCTaGTGCCCTATCAGCCTCTGGTCCCACCAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: HPGWHSMHSTVP*CPISLWSHQCH
Trigger: ATGGCACTGGTGGGACCAGAGGCTGATAGGGCAGCAGGGAACAGTGGAGTGCATCGAGTGCCAGCCAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GCAGTGGTTGTCTTCGTAGCTCCACAGCCAGTGGTTTaGCTGGGCTGCCCGTCCACACTCGCCTCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: AVVVFVAPQPVV*LGCPSTLASPS
Trigger: ACTCGGAGAGGCGAGTGTGGACGGGCAGCCCAGCCAAACCACTGGCTGTGGAGCTACGAAGACAACCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp ACAGGCACCAACTGGGGACTTGCTAGACCCTCAACCTaGGGGCAAGCCTCTGGGCCACGAACCAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: TGTNWGLARPST*GQASGPRTRMS
Trigger: GGACATCCTGGTTCGTGGCCCAGAGGCTTGCCCCCAGGTTGAGGGTCTAGCAAGTCCCCAGTTGGTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GCCTCTGGTCCCACCAGTGCCATCAGGGTCAGGGGCTaGAACTCCACATCCTCTCGTAGCAGGTGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ASGPTSAIRVRG*NSTSSRSRWLS
Trigger: TGACAGCCACCTGCTACGAGAGGATGTGGAGTTCCAGCCCCTGACCCTGATGGCACTGGTGGGACCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp CTCGTTCTCGATCTCGGAGGCTGCTGCGCCGCACTTTaGCCCCTTCTGCCTCCTCAGTGGCCTTTACCAGGT +
Preference number: 6 (lower is better)
Translates to: LVLDLGGCCAAL*PLLPPQWPLPG
Trigger: ACCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp TCTCGTTCTCGATCTCGGAGGCTGCTGCGCCGCACTTaGGCCCCTTCTGCCTCCTCAGTGGCCTTTACCAGG +
Preference number: 6 (lower is better)
Translates to: SRSRSRRLLRRT*APSASSVAFTR
Trigger: CCTGGTAAAGGCCACTGAGGAGGCAGAAGGGGCCAAAGTGCGGCGCAGCAGCCTCCGAGATCGAGAACGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp GGATACAGGCCTGAGGATCTGCAGCAGGGGCACCACAGCTCCTCCTaGGGTTCGCATCCTGGGCCTGAACCCCCAAGGCCTTTACTTTGG +
Preference number: 6 (lower is better)
Translates to: GYRPEDLQQGHHSSS*GSHPGPEPPRPLLW
Trigger: CCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAGGCCTGTATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp GCACCACAGCTCCTCCTTGGGTTCGCATCCTGGGCCTaGACCCCCAAGGCCTTTACTTTGGGCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: APQLLLGFASWA*TPKAFTLGSSS
Trigger: GGAGGATGAGCCCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGAACCCAAGGAGGAGCTGTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CCAGCTAGGCCTGAGCGCCACTCAAGATCTAGGGAGTaGACTGAAGGCCTCTGGGAGAAGGGGGTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: PARPERHSRSRE*TEGLWEKGVPL
Trigger: CAAGGGAACCCCCTTCTCCCAGAGGCCTTCAGTGCACTCCCTAGATCTTGAGTGGCGCTCAGGCCTAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GCACCACAAACTGCGGCAGGGTGCCTGAACCATTGGTaGGTTGAGGGGCTTGGGGTGGTGGCTCACAGTACA +
Preference number: 6 (lower is better)
Translates to: APQTAAGCLNHW*VEGLGVVAHST
Trigger: TGTACTGTGAGCCACCACCCCAAGCCCCTCAACCCACCAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp ATGGACTCTGCTTCGTACTGGACAGGGCCTAGAGCCAGGCGCAGGTaGCCCATCTGCACCACAAACTGCGGCAGGGTGCCTGAACCATTG +
Preference number: 6 (lower is better)
Translates to: MDSASYWTGPRARRR*PICTTNCGRVPEPL
Trigger: CAATGGTTCAGGCACCCTGCCGCAGTTTGTGGTGCAGATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAGCAGAGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp GGTGGTCTCCATTGCTGTCTACCAGCAGATCTGGACTaGTGGCTGAGCCTGGGGGCCCCACTTGCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: GGLHCCLPADLD*WLSLGAPLAGN
Trigger: ATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGGTAGACAGCAATGGAGACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CACACTCGCCTCTCCGAGTACACCTTCCCTGAAGGATaGACCAACCACATAGTGGGTCCCTGGCCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: HTRLSEYTFPEG*TNHIVGPWPGD
Trigger: GTCTCCAGGCCAGGGACCCACTATGTGGTTGGTGCATCCTTCAGGGAAGGTGTACTCGGAGAGGCGAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp GCCACATGGCAGCGGTCCCGCTGGGAGAAGCTTGGCTaGTCCTCTAAGGTGTGGATGAGTGTGAGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: ATWQRSRWEKLG*SSKVWMSVRRK
Trigger: CTTCCTTCTCACACTCATCCACACCTTAGAGGAGCAGCCAAGCTTCTCCCAGCGGGACCGCTGCCATGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TCTGGGCAGTGCTCTCCATATATACAGTGGCTACTCTaGGGGCACCAGTGGCACCGCCACAGGCTGCTCACA +
Preference number: 6 (lower is better)
Translates to: SGQCSPYIQWLL*GHQWHRHRLLT
Trigger: TGTGAGCAGCCTGTGGCGGTGCCACTGGTGCCCCCAGAGTAGCCACTGTATATATGGAGAGCACTGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TCGCATCCTGGGCCTGAACCCCCAAGGCCTTTACTTTaGGCTCATCCTCCAGCCACACAGACAGCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: SHPGPEPPRPLL*AHPPATQTARA
Trigger: AGCCCTTGCTGTCTGTGTGGCTGGAGGATGAGCCCAAAGTAAAGGCCTTGGGGGTTCAGGCCCAGGATGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GGCCCAACTGGGCCTCCACAGGAAAGGTGGACATCATaGACTCTGCTTCGTACTGGACAGGGCCTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: GPTGPPQERWTS*TLLRTGQGLEP
Trigger: TGGCTCTAGGCCCTGTCCAGTACGAAGCAGAGTCCATGATGTCCACCTTTCCTGTGGAGGCCCAGTTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp ACCAGTTCCTGTGTCCTGCTGCTCACCAACAAGAGCTGGTTGGCATaGTCAGTGAGCTGGGCCTGTGGGCACTCAGCCAGGTCACGGAAA +
Preference number: 6 (lower is better)
Translates to: TSSCVLLLTNKSWLA*SVSWACGHSARSRK
Trigger: TTTCCGTGACCTGGCTGAGTGCCCACAGGCCCAGCTCACTGACAATGCCAACCAGCTCTTGTTGGTGAGCAGCAGGACACAGGAACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp GTCACATCCCCAAGGCGCCGCTTCTCACATACACCCTaGTTCACTTGCCCACAAGCCACCAGTTCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: VTSPRRRFSHTP*FTCPQATSSCV
Trigger: GACACAGGAACTGGTGGCTTGTGGGCAAGTGAAGCAGGGTGTATGTGAGAAGCGGCGCCTTGGGGATGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp AGATCTGGACTGATGGCTGAGCCTGGGGGCCCCACTTaGTGGGAATGGTATACCTGGCCATGGGAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: RSGLMAEPGGPT*WEWYTWPWELF
Trigger: AAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TCCGAGCAGAGATGCGGTAGAGAGAAGGGTCAGGGTTaGAGGGCTGGCCAGCCACAGTTACAGCATTTCGCA +
Preference number: 6 (lower is better)
Translates to: SEQRCGREKGQG*RAGQPQLQHFA
Trigger: TGCGAAATGCTGTAACTGTGGCTGGCCAGCCCTGCAACCCTGACCCTTCTCTCTACCGCATCTCTGCTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp CTGATGGCTGAGCCTGGGGGCCCCACTTGCTGGGAATaGTATACCTGGCCATGGGAGCTGTTTAGAAAGACC +
Preference number: 6 (lower is better)
Translates to: LMAEPGGPTCWE*YTWPWELFRKT
Trigger: GGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TTTTCACCCTCTGGGCAGTGCTCTCCATATATACAGTaGCTACTCTGGGGGCACCAGTGGCACCGCCACAGG +
Preference number: 6 (lower is better)
Translates to: FSPSGQCSPYIQ*LLWGHQWHRHR
Trigger: CCTGTGGCGGTGCCACTGGTGCCCCCAGAGTAGCCACTGTATATATGGAGAGCACTGCCCAGAGGGTGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GATCACCAGCATTGTCCAGCCGCTGGATCTCACCCCTaGTTACATAGATGGGCACTGGGAGCTCCCACTGAG +
Preference number: 6 (lower is better)
Translates to: DHQHCPAAGSHP*LHRWALGAPTE
Trigger: CTCAGTGGGAGCTCCCAGTGCCCATCTATGTAACCAGGGGTGAGATCCAGCGGCTGGACAATGCTGGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GATGCCAGGAGGACGACTCTTAATGGCCACTTGGACTaGCCCAGCAGTGCCATTGGGAGCAGGAGATGTCAC +
Preference number: 6 (lower is better)
Translates to: DARRTTLNGHLD*PSSAIGSRRCH
Trigger: GTGACATCTCCTGCTCCCAATGGCACTGCTGGGCCAGTCCAAGTGGCCATTAAGAGTCGTCCTCCTGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GGAGCCAGGCGAGGGTTAGGCTGGTATAGGAATCCCTaGCCCCCACTAGCACTGGCAAAGTCTACTTGCATG +
Preference number: 6 (lower is better)
Translates to: GARRGLGWYRNP*PPLALAKSTCM
Trigger: CATGCAAGTAGACTTTGCCAGTGCTAGTGGGGGCCAGGGATTCCTATACCAGCCTAACCCTCGCCTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp ACAGGAAAGGTGGACATCATGGACTCTGCTTCGTACTaGACAGGGCCTAGAGCCAGGCGCAGGTTGCCCATC +
Preference number: 6 (lower is better)
Translates to: TGKVDIMDSASY*TGPRARRRLPI
Trigger: GATGGGCAACCTGCGCCTGGCTCTAGGCCCTGTCCAGTACGAAGCAGAGTCCATGATGTCCACCTTTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGGGAAAGTAGTGAAGCCACATGGCAGCGGTCCCGCTaGGAGAAGCTTGGCTGCTCCTCTAAGGTGTGGATG +
Preference number: 6 (lower is better)
Translates to: RESSEATWQRSR*EKLGCSSKVWM
Trigger: CATCCACACCTTAGAGGAGCAGCCAAGCTTCTCCCAGCGGGACCGCTGCCATGTGGCTTCACTACTTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GACTTGGGTGATGGTGTCTGTATCAAGCACCCTGGCTaGCACTCGATGCACTCCACTGTTCCCTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: DLGDGVCIKHPG*HSMHSTVPCCP
Trigger: AGGGCAGCAGGGAACAGTGGAGTGCATCGAGTGCCAGCCAGGGTGCTTGATACAGACACCATCACCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGCATGGGAGTGTTCTCTCCAGAAGGGCAGCCAGTCTaGCCCAGACTCTGGGAAACAGTGCCACCATTGTGC +
Preference number: 6 (lower is better)
Translates to: SMGVFSPEGQPV*PRLWETVPPLC
Trigger: GCACAATGGTGGCACTGTTTCCCAGAGTCTGGGCCAGACTGGCTGCCCTTCTGGAGAGAACACTCCCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGAGCCGAACTCCACCTTCCTCACCATCTTCCAGCATaGGAGTGTTCTCTCCAGAAGGGCAGCCAGTCTGGC +
Preference number: 6 (lower is better)
Translates to: RAELHLPHHLPA*ECSLQKGSQSG
Trigger: GCCAGACTGGCTGCCCTTCTGGAGAGAACACTCCCATGCTGGAAGATGGTGAGGAAGGTGGAGTTCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GCGAGGGATCTCCCGGGCATAGAGCAGTTTGTTCACTaGGGAATCCCGGCCCACTTTATGCTCCGAGACCAT +
Preference number: 6 (lower is better)
Translates to: ARDLPGIEQFVH*GIPAHFMLRDH
Trigger: ATGGTCTCGGAGCATAAAGTGGGCCGGGATTCCCCAGTGAACAAACTGCTCTATGCCCGGGAGATCCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp CTGCCCATCACCAGGGTCCTCAGCCTGGTACAACACTaGAGTCACATCCCCAAGGCGCCGCTTCTCACATAC +
Preference number: 6 (lower is better)
Translates to: LPITRVLSLVQH*SHIPKAPLLTY
Trigger: GTATGTGAGAAGCGGCGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGCTGAGGACCCTGGTGATGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp AGTCACATCCCCAAGGCGCCGCTTCTCACATACACCCTGCTTCACTaGCCCACAAGCCACCAGTTCCTGTGTCCTGCTGCTCACCAACAA +
Preference number: 6 (lower is better)
Translates to: SHIPKAPLLTYTLLH*PTSHQFLCPAAHQQ
Trigger: TTGTTGGTGAGCAGCAGGACACAGGAACTGGTGGCTTGTGGGCAAGTGAAGCAGGGTGTATGTGAGAAGCGGCGCCTTGGGGATGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp AGCCACAAACTGCCCATCACCAGGGTCCTCAGCCTGGTACAACACTaGAGTCACATCCCCAAGGCGCCGCTTCTCACATACACCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SHKLPITRVLSLVQH*SHIPKAPLLTYTLL
Trigger: AAGCAGGGTGTATGTGAGAAGCGGCGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGCTGAGGACCCTGGTGATGGGCAGTTTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp GCCACAGTTACAGCATTTCGCACATCATTAAAGGCCTGGCCCAGGTaGGAACCCAGGATGGTGATGGCCAAGCCACCTTCTGGGGGACCA +
Preference number: 6 (lower is better)
Translates to: ATVTAFRTSLKAWPR*EPRMVMAKPPSGGP
Trigger: TGGTCCCCCAGAAGGTGGCTTGGCCATCACCATCCTGGGTTCCAACCTGGGCCAGGCCTTTAATGATGTGCGAAATGCTGTAACTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp GGAGGACGACTCTTAATGGCCACTTGGACTGGCCCAGCAGTGCCATaGGGAGCAGGAGATGTCACACATACAATCCGAGCAGAGATGCGG +
Preference number: 6 (lower is better)
Translates to: GGRLLMATWTGPAVP*GAGDVTHTIRAEMR
Trigger: CCGCATCTCTGCTCGGATTGTATGTGTGACATCTCCTGCTCCCAATGGCACTGCTGGGCCAGTCCAAGTGGCCATTAAGAGTCGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp GGCTCCTGGATAGGGCAAGGTTGGTCACCCACAAAGACACTGATGTaGCCTCCTGTCTGGAGATACTGCCCATGGATGGTGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GSWIGQGWSPTKTLM*PPVWRYCPWMVSWV
Trigger: CACCCAGCTCACCATCCATGGGCAGTATCTCCAGACAGGAGGCAACATCAGTGTCTTTGTGGGTGACCAACCTTGCCCTATCCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp AGGAATCCCTGGCCCCCACTAGCACTGGCAAAGTCTACTTGCATGTaGTCTAGGGCAAAGAAGACTCGCTTTGGGAGGGCCCCATCTGGC +
Preference number: 6 (lower is better)
Translates to: RNPWPPLALAKSTCM*SRAKKTRFGRAPSG
Trigger: GCCAGATGGGGCCCTCCCAAAGCGAGTCTTCTTTGCCCTAGACAACATGCAAGTAGACTTTGCCAGTGCTAGTGGGGGCCAGGGATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp TTCACCAGGCACTCTCCATCTCCAATATGCACCTGCACCTCCTCCTaGCTGATCCCCAGATTGAGGCCCTCGCCCTCCACATCTAGGACA +
Preference number: 6 (lower is better)
Translates to: FTRHSPSPICTCTSS*LIPRLRPSPSTSRT
Trigger: TGTCCTAGATGTGGAGGGCGAGGGCCTCAATCTGGGGATCAGCAAGGAGGAGGTGCAGGTGCATATTGGAGATGGAGAGTGCCTGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp TGCCCATCACCAGGGTCCTCAGCCTGGTACAACACTTaGGTCACATCCCCAAGGCGCCGCTTCTCACATACA +
Preference number: 6 (lower is better)
Translates to: CPSPGSSAWYNT*VTSPRRRFSHT
Trigger: TGTATGTGAGAAGCGGCGCCTTGGGGATGTGACTCAAGTGTTGTACCAGGCTGAGGACCCTGGTGATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp TCCATTGCTGTCTACCAGCAGATCTGGACTGATGGCTaGGCCTGGGGGCCCCACTTGCTGGGAATGGTATAC +
Preference number: 6 (lower is better)
Translates to: SIAVYQQIWTDG*AWGPHLLGMVY
Trigger: GTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTCAGCCATCAGTCCAGATCTGCTGGTAGACAGCAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp TCCCTGGCCTGGAGACAGGTAGTGCAGTTAGGAAACTaGGGACAGGCTGCCACAAGTATCCGGTCTACCTGC +
Preference number: 6 (lower is better)
Translates to: SLAWRQVVQLGN*GQAATSIRSTC
Trigger: GCAGGTAGACCGGATACTTGTGGCAGCCTGTCCTCAGTTTCCTAACTGCACTACCTGTCTCCAGGCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp GAGGATTCAGGCTCAGCAGGACAGGGTCCTGGTAGGTaGAGTTCTGGGTTGAGATGCCAGGAGGACGACTCT +
Preference number: 6 (lower is better)
Translates to: EDSGSAGQGPGR*SSGLRCQEDDS
Trigger: AGAGTCGTCCTCCTGGCATCTCAACCCAGAACTTCACCTACCAGGACCCTGTCCTGCTGAGCCTGAATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp AGGGAAAGGCACACAGGGCCGCCTGTGCCTGACTTGTaGCTGCTGAAAATGCACCTAGCAAAGTGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RERHTGPPVPDL*LLKMHLAKCLE
Trigger: CTCCAGACACTTTGCTAGGTGCATTTTCAGCAGGCACAAGTCAGGCACAGGCGGCCCTGTGTGCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CACTCGTCCACCTCCCCGGAAGCTGACACTAGGCTCTaGTTCCACCAGTTGGGGATTGGCTGTGTATCGAAA +
Preference number: 6 (lower is better)
Translates to: HSSTSPEADTRL*FHQLGIGCVSK
Trigger: TTTCGATACACAGCCAATCCCCAACTGGTGGAAGCAGAGCCTAGTGTCAGCTTCCGGGGAGGTGGACGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GTTGAGATGCCAGGAGGACGACTCTTAATGGCCACTTaGACTGGCCCAGCAGTGCCATTGGGAGCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: VEMPGGRLLMAT*TGPAVPLGAGD
Trigger: ATCTCCTGCTCCCAATGGCACTGCTGGGCCAGTCCAAGTGGCCATTAAGAGTCGTCCTCCTGGCATCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TTGCTGTTGAGCAAATTGGAGAGTTGTGTGAGACCCTaGCGCACGGTGACACTGCGACCCTCTTCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: LLLSKLESCVRP*RTVTLRPSSPS
Trigger: GCTTGGGGAAGAGGGTCGCAGTGTCACCGTGCGCCAGGGTCTCACACAACTCTCCAATTTGCTCAACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp TGGCAAAGTCTACTTGCATGTTGTCTAGGGCAAAGAAGACTCGCTTaGGGAGGGCCCCATCTGGCACTGCTGGACTGTGGCACAGGAGGA +
Preference number: 6 (lower is better)
Translates to: WQSLLACCLGQRRLA*GGPHLALLDCGTGG
Trigger: TCCTCCTGTGCCACAGTCCAGCAGTGCCAGATGGGGCCCTCCCAAAGCGAGTCTTCTTTGCCCTAGACAACATGCAAGTAGACTTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp ACATCCTCTCGTAGCAGGTGGCTGTCATTCAGAGTTCGTTTTGCCTaGCCTGTCACAGCGTCCACAGGGCCCTTGTCCACCTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: TSSRSRWLSFRVRFA*PVTASTGPLSTWYL
Trigger: CAAGTACCAGGTGGACAAGGGCCCTGTGGACGCTGTGACAGGCAAGGCAAAACGAACTCTGAATGACAGCCACCTGCTACGAGAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp CAGCAGGACAGGGTCCTGGTAGGTGAAGTTCTGGGTTaGGATGCCAGGAGGACGACTCTTAATGGCCACTTG +
Preference number: 6 (lower is better)
Translates to: QQDRVLVGEVLG*DARRTTLNGHL
Trigger: CAAGTGGCCATTAAGAGTCGTCCTCCTGGCATCTCAACCCAGAACTTCACCTACCAGGACCCTGTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp CACTGTAGTAAGCCACTCTCAAGATGGATACAGGCCTaGGGATCTGCAGCAGGGGCACCACAGCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: HCSKPLSRWIQA*GSAAGAPQLLL
Trigger: AAGGAGGAGCTGTGGTGCCCCTGCTGCAGATCCTCAGGCCTGTATCCATCTTGAGAGTGGCTTACTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp GTCACAGAGGTCAAGTCCTCATCTGACAGGGTTAGGTaGCCAGCTAGGCCTGAGCGCCACTCAAGATCTAGG +
Preference number: 6 (lower is better)
Translates to: VTEVKSSSDRVR*PARPERHSRSR
Trigger: CCTAGATCTTGAGTGGCGCTCAGGCCTAGCTGGTCACCTAACCCTGTCAGATGAGGACTTGACCTCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CTTCAGCTCAGGGCTGAGCTGAAAGAGGTGATTCACTaGACCCACGTAGAGTTTGCCCTGATCTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LQLRAELKEVIH*THVEFALIWCQ
Trigger: CTGGCACCAGATCAGGGCAAACTCTACGTGGGTGCAGTGAATCACCTCTTTCAGCTCAGCCCTGAGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp GCTTCACTTGCCCACAAGCCACCAGTTCCTGTGTCCTaGTGCTCACCAACAAGAGCTGGTTGGCATTGTCAG +
Preference number: 6 (lower is better)
Translates to: ASLAHKPPVPVS*CSPTRAGWHCQ
Trigger: CTGACAATGCCAACCAGCTCTTGTTGGTGAGCAGCAGGACACAGGAACTGGTGGCTTGTGGGCAAGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGGTGGTTGAAGCTGGTATTTGGTACAGAGAAGCGATaGACCCTGGTCAAAGGCAGCAGCGGCAGGAACAGC +
Preference number: 6 (lower is better)
Translates to: RWLKLVFGTEKR*TLVKGSSGRNS
Trigger: GCTGTTCCTGCCGCTGCTGCCTTTGACCAGGGTCCATCGCTTCTCTGTACCAAATACCAGCTTCAACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GGGGGCCCCACTTGCTGGGAATGGTATACCTGGCCATaGGAGCTGTTTAGAAAGACCTTATGTAGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: GGPTCWEWYTWP*ELFRKTLCSWP
Trigger: AGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GAGCCTGGGGGCCCCACTTGCTGGGAATGGTATACCTaGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGC +
Preference number: 6 (lower is better)
Translates to: EPGGPTCWEWYT*PWELFRKTLCS
Trigger: GCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCAGGTATACCATTCCCAGCAAGTGGGGCCCCCAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp CTAAGGGAAAGGCACACAGGGCCGCCTGTGCCTGACTaGTGCCTGCTGAAAATGCACCTAGCAAAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LRERHTGPPVPD*CLLKMHLAKCL
Trigger: CAGACACTTTGCTAGGTGCATTTTCAGCAGGCACAAGTCAGGCACAGGCGGCCCTGTGTGCCTTTCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp TGGCCCCCACTAGCACTGGCAAAGTCTACTTGCATGTaGTCTAGGGCAAAGAAGACTCGCTTTGGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: WPPLALAKSTCM*SRAKKTRFGRA
Trigger: GGCCCTCCCAAAGCGAGTCTTCTTTGCCCTAGACAACATGCAAGTAGACTTTGCCAGTGCTAGTGGGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp AGAGTTTGCCCTGATCTGGTGCCAGCACCAGGTGGTTaGAGCTGGTATTTGGTACAGAGAAGCGATGGACCC +
Preference number: 6 (lower is better)
Translates to: RVCPDLVPAPGG*SWYLVQRSDGP
Trigger: GGGTCCATCGCTTCTCTGTACCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TCCCTGGATGTCTCCTCTAAGGAGGCAGGTAGCTTTTaGAGTTTTCCAGGCAGCTCTAGCCAGCAGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SLDVSSKEAGSF*SFPGSSSQQWY
Trigger: GTACCACTGCTGGCTAGAGCTGCCTGGAAAACTGCAAAAGCTACCTGCCTCCTTAGAGGAGACATCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TTTGCGTTCAACATGCCCAAAGACTATGAGGACCACTaGTTCTCCTGGCTCAGTCTGGGGCATGGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: FAFNMPKDYEDH*FSWLSLGHGVA
Trigger: TGCCACACCATGCCCCAGACTGAGCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGTTGAACGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp ATCTGGTGCCAGCACCAGGTGGTTGAAGCTGGTATTTaGTACAGAGAAGCGATGGACCCTGGTCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: IWCQHQVVEAGI*YREAMDPGQRQ
Trigger: CTGCCTTTGACCAGGGTCCATCGCTTCTCTGTACCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GTGATTCACTGCACCCACGTAGAGTTTGCCCTGATCTaGTGCCAGCACCAGGTGGTTGAAGCTGGTATTTGG +
Preference number: 6 (lower is better)
Translates to: VIHCTHVEFALI*CQHQVVEAGIW
Trigger: CCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAACTCTACGTGGGTGCAGTGAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TGGCCATGGGAGCTGTTTAGAAAGACCTTATGTAGCTaGCCTTGGGTGTCTCCCAGGAAGGCTATCGTGTGC +
Preference number: 6 (lower is better)
Translates to: WPWELFRKTLCS*PWVSPRKAIVC
Trigger: GCACACGATAGCCTTCCTGGGAGACACCCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp CACCTCCTGGGCACTGTAGACAGCCTTTTCACCCTCTaGGCAGTGCTCTCCATATATACAGTGGCTACTCTG +
Preference number: 6 (lower is better)
Translates to: HLLGTVDSLFTL*AVLSIYTVATL
Trigger: CAGAGTAGCCACTGTATATATGGAGAGCACTGCCCAGAGGGTGAAAAGGCTGTCTACAGTGCCCAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AACATGCCCAAAGACTATGAGGACCACTGCTTCTCCTaGCTCAGTCTGGGGCATGGTGTGGCATATGATGGC +
Preference number: 6 (lower is better)
Translates to: NMPKDYEDHCFS*LSLGHGVAYDG
Trigger: GCCATCATATGCCACACCATGCCCCAGACTGAGCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp ACAGCATTTCGCACATCATTAAAGGCCTGGCCCAGGTaGGAACCCAGGATGGTGATGGCCAAGCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: TAFRTSLKAWPR*EPRMVMAKPPS
Trigger: AGAAGGTGGCTTGGCCATCACCATCCTGGGTTCCAACCTGGGCCAGGCCTTTAATGATGTGCGAAATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp AGGTCTGTCATCTCAGTCATCAAGTCTGTGAACTCCTaGCGGCACTGGTCACCCACACCAGTCTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: RSVISVIKSVNS*RHWSPTPVSRF
Trigger: GAACCTGGAGACTGGTGTGGGTGACCAGTGCCGCAAGGAGTTCACAGACTTGATGACTGAGATGACAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp ATTCACTGCACCCACGTAGAGTTTGCCCTGATCTGGTaGCAGCACCAGGTGGTTGAAGCTGGTATTTGGTAC +
Preference number: 6 (lower is better)
Translates to: IHCTHVEFALIW*QHQVVEAGIWY
Trigger: GTACCAAATACCAGCTTCAACCACCTGGTGCTGGCACCAGATCAGGGCAAACTCTACGTGGGTGCAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp TGGGAGCTGTTTAGAAAGACCTTATGTAGCTGGCCTTaGGTGTCTCCCAGGAAGGCTATCGTGTGCCCATCT +
Preference number: 6 (lower is better)
Translates to: WELFRKTLCSWP*VSPRKAIVCPS
Trigger: AGATGGGCACACGATAGCCTTCCTGGGAGACACCCAAGGCCAGCTACATAAGGTCTTTCTAAACAGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 72 bp ATAGGGCAAGGTTGGTCACCCACAAAGACACTGATGTaGCCTCCTGTCTGGAGATACTGCCCATGGATGGTG +
Preference number: 6 (lower is better)
Translates to: IGQGWSPTKTLM*PPVWRYCPWMV
Trigger: CACCATCCATGGGCAGTATCTCCAGACAGGAGGCAACATCAGTGTCTTTGTGGGTGACCAACCTTGCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CAA 90 bp GCATATGATGGCTTCAGGACACACAGGCTCCTGGATAGGGCAAGGTaGGTCACCCACAAAGACACTGATGTTGCCTCCTGTCTGGAGATA +
Preference number: 6 (lower is better)
Translates to: AYDGFRTHRLLDRAR*VTHKDTDVASCLEI
Trigger: TATCTCCAGACAGGAGGCAACATCAGTGTCTTTGTGGGTGACCAACCTTGCCCTATCCAGGAGCCTGTGTGTCCTGAAGCCATCATATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp TATCGAAAAGGGGTGGTGAGCAGTTTGCGTTCAACATaGCCAAAGACTATGAGGACCACTGCTTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: YRKGVVSSLRST*PKTMRTTASPG
Trigger: GCCAGGAGAAGCAGTGGTCCTCATAGTCTTTGGGCATGTTGAACGCAAACTGCTCACCACCCCTTTTCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp AGCAGTTTGTTCACTGGGGAATCCCGGCCCACTTTATaGTCCGAGACCATGCAGGAATCGATGAAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: SSLFTGESRPTL*SETMQESMKVC
Trigger: ACAGACTTTCATCGATTCCTGCATGGTCTCGGAGCATAAAGTGGGCCGGGATTCCCCAGTGAACAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp GGCAGCCTGGATAAGGCCCTGGCCATGGCAGGTAAGTaGCATTTCCACATAGGAATAAAGGTTGACATCTCT +
Preference number: 6 (lower is better)
Translates to: GSLDKALAMAGK*HFHIGIKVDIS
Trigger: AGAGATGTCAACCTTTATTCCTATGTGGAAATGCCACTTACCTGCCATGGCCAGGGCCTTATCCAGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp TCTGGGAAACAGTGCCACCATTGTGCACCTGAGGAATaGGTACCACTGTTGCTCCATCTGGGACCTTATAGT +
Preference number: 6 (lower is better)
Translates to: SGKQCHHCAPEE*VPLLLHLGPYS
Trigger: ACTATAAGGTCCCAGATGGAGCAACAGTGGTACTCATTCCTCAGGTGCACAATGGTGGCACTGTTTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS CCA 72 bp AGGCCTGAACAGCACTGCAGTCATAGAAGGAGAATGTaGTGGCGGTCAATACCACATCCTCAAACATTAGGG +
Preference number: 6 (lower is better)
Translates to: RPEQHCSHRRRM*WRSIPHPQTLG
Trigger: CCCTAATGTTTGAGGATGTGGTATTGACCGCCACCACATTCTCCTTCTATGACTGCAGTGCTGTTCAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp TTGCTCCATCTGGGACCTTATAGTGTTGTAGGGTGTTaGGTCTCTTCCAGTGGTTTTGAGTCACAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LLHLGPYSVVGC*VSSSGFESQRS
Trigger: TGACCTCTGTGACTCAAAACCACTGGAAGAGACTCAACACCCTACAACACTATAAGGTCCCAGATGGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS GCA 72 bp CAGAATCGCAGAAGTAGGCTGTTTGTCTTCCAAATGTaGAGGGTCTCTGGATCTTCAATGCCATGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: QNRRSRLFVFQM*RVSGSSMPCFS
Trigger: AGAGAAACATGGCATTGAAGATCCAGAGACCCTGCACATTTGGAAGACAAACAGCCTACTTCTGCGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7
CDS TCA 72 bp ATCAGAAAAAGCTCCTACATAGCTATTGTTGTAGTCTaGAAAGTCACCGACCACAAGTCTTCCCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: IRKSSYIAIVVV*KVTDHKSSQSF
Trigger: GAAGGACTGGGAAGACTTGTGGTCGGTGACTTTTCAGACTACAACAATAGCTATGTAGGAGCTTTTTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002079.7