RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053646

Ensembl transcript IDs: ENSMUST00000072093.13, ENSMUST00000130366.2, ENSMUST00000131462.8, ENSMUST00000192988.3

Found 386 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGACCCTACCTAGGAGCCGGAGAGAGCTTGCCAACCTCATGGTaGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCA +
Preference number: 1 (lower is better)
Translates to: GRPYLGAGESLPTSW*PSVGVRGPFRARCP
Trigger: TGGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTTGGCAAGCTCTCTCCGGCTCCTAGGTAGGGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp ACTGAACCACTAGGTCCCAGGCCTACAAGGCAGGTCCAATGGGGCTaGGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACCTTTC +
Preference number: 1 (lower is better)
Translates to: TEPLGPRPTRQVQWG*GYELVPPRDWEPPF
Trigger: GAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAGGCCTGGGACCTAGTGGTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 90 bp CAGGCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTaGCCAGGAGGTACAGAGACAACAGCAGGCAAAGACTCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: QASTKVVASPLRFQG*PGGTETTAGKDSLV
Trigger: GACCAGGGAGTCTTTGCCTGCTGTTGTCTCTGTACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 90 bp GGGTTCTCTTCCTTCCTCTGTGATTCCCAATGGGACATAGGTCAGTaGTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGCCTACC +
Preference number: 1 (lower is better)
Translates to: GFSSFLCDSQWDIGQ*SRTVQSPQGPGGPT
Trigger: GGTAGGCCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAGGAAGGAAGAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 90 bp GTCCCAGGCCTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTaGTGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCT +
Preference number: 1 (lower is better)
Translates to: VPGLQGRSNGAEAMS*CHQETGSHLSLNSA
Trigger: AGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAGGCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 90 bp AGGAAGTGGGCGGGCGGGTTCTCTTCCTTCCTCTGTGATTCCCAATaGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: RKWAGGFSSFLCDSQ*DIGQCSRTVQSPQG
Trigger: CCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAGGAAGGAAGAGAACCCGCCCGCCCACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 90 bp CCAGGCCTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTaGCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: PGLQGRSNGAEAMSW*HQETGSHLSLNSAC
Trigger: ACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 90 bp GAGCTGGTGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTaGTTGTCAGTCACTACAGGCATCTACGAAGGTGGTGGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: ELVPPRDWEPPFIKL*LSVTTGIYEGGGLS
Trigger: GGAGAGGCCACCACCTTCGTAGATGCCTGTAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 90 bp GACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATaGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCCCT +
Preference number: 1 (lower is better)
Translates to: DCWPSVTVVPHIWQA*GRWDLTEIVTVITP
Trigger: AGGGGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp CAACTATCATTAGTACTAAAGTTCACATGCTCCCAAAAGAGGGCCTaGCTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: QLSLVLKFTCSQKRA*LLAVCDCGSPHLAG
Trigger: GCCTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTTGGGAGCATGTGAACTTTAGTACTAATGATAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp CCCTGCCATGTTGACTTAAAAGGTGCCTCCCTTCCTGTATCTGTCTaGAGTCTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: PCHVDLKGASLPVSV*SLAKTSFPLSALFS
Trigger: AGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAGACTTCAGACAGATACAGGAAGGGAGGCACCTTTTAAGTCAACATGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp CAAGCCTGGAGCAGAGGTGTGTCTCTGTCACCATCCCTGCCATGTTaGCTTAAAAGGTGCCTCCCTTCCTGTATCTGTCTGAAGTCTAGC +
Preference number: 1 (lower is better)
Translates to: QAWSRGVSLSPSLPC*LKRCLPSCICLKSS
Trigger: GCTAGACTTCAGACAGATACAGGAAGGGAGGCACCTTTTAAGTCAACATGGCAGGGATGGTGACAGAGACACACCTCTGCTCCAGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp GGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTaGGACCCACACTGCCTGGAATCGCCTTTAATAACGCCATACTTC +
Preference number: 1 (lower is better)
Translates to: GQQCGNWNPETGSWT*DPHCLESPLITPYF
Trigger: GAAGTATGGCGTTATTAAAGGCGATTCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp GCTTCTAACAGGAAAATACCACAAGGTAGCTACTACACAGGCAGGTaGGTAGCTCTGAGCTCCTGCCTCAGGTACCTTAACATGGACAGC +
Preference number: 1 (lower is better)
Translates to: ASNRKIPQGSYYTGR*VALSSCLRYLNMDS
Trigger: GCTGTCCATGTTAAGGTACCTGAGGCAGGAGCTCAGAGCTACTCACCTGCCTGTGTAGTAGCTACCTTGTGGTATTTTCCTGTTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 90 bp CATTCTCAACCGCCAGCTGCCAAGTGCACCACAGTACCATGGTCTTaGAGCTCACTTGTAGCTTCTAACAGGAAAATACCACAAGGTAGC +
Preference number: 1 (lower is better)
Translates to: HSQPPAAKCTTVPWS*SSLVASNRKIPQGS
Trigger: GCTACCTTGTGGTATTTTCCTGTTAGAAGCTACAAGTGAGCTTCAAGACCATGGTACTGTGGTGCACTTGGCAGCTGGCGGTTGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACATGGGGCTGAGGCTATaGGCTGGTGCCACCAAGAGA +
Preference number: 2 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDMGLRL*AGATKR
Trigger: TCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCAT...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCCTCTTCCTTCCTCTGTaGTTCCCAATGGGACATAGG +
Preference number: 2 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPLFLPL*FPMGHR
Trigger: CCTATGTCCCATTGGGAATCACAGAGGAAGGAAGAG...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACACAGGGTCATGGACCTaGGACCCACACTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDTGSWT*DPHCLE
Trigger: TTCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGT...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTCAAGGTGGAGCTCTCTaGGGATGCCACGACCCTTGC +
Preference number: 2 (lower is better)
Translates to: AHVFKHLGKSLRLARSLAQGGAL*GCHDPC
Trigger: GCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTG...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 90 bp TATACACATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTaGCCTGGTGAAGCCAATGGCATTCTCAACCGCCAGCTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: YTHEPRWSSLRMPRP*PGEANGILNRQLPS
Trigger: ACTTGGCAGCTGGCGGTTGAGAATGCCATTGGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATGTGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR GCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCTGGGACATAGGTCAGTaGTCAAGAACAGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPWDIGQ*SRTVQS
Trigger: AGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTGCTGAGGCTATGAGCTaGTGCCACCAAGAGACTGGG +
Preference number: 2 (lower is better)
Translates to: AHVFKHLGKSLRLARSLAAEAMS*CHQETG
Trigger: CCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGC...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAGTGCCACCAAGAGACTaGGAGCCACCTTTCATTAAA +
Preference number: 2 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGVPPRD*EPPFIK
Trigger: TTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCAC...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTGAAGAAGACAGGAAGTaGGCGGGCGGGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPEEDRK*AGGFSS
Trigger: GGAAGAGAACCCGCCCGCCCACTTCCTGTCTTCTTC...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 90 bp CTGGTGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTaGTCAGTCACTACAGGCATCTACGAAGGTGGTGGCCTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LVPPRDWEPPFIKLC*SVTTGIYEGGGLSL
Trigger: AAGGGAGAGGCCACCACCTTCGTAGATGCCTGTAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCGAGAGTCACCAGGCTTaGGGCAGGCCTAGCACTACC +
Preference number: 2 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITESHQA*GRPSTT
Trigger: GGTAGTGCTAGGCCTGCCCCAAGCCTGGTGACTCTC...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACACACATGAGCCAAGGTaGAGCTCTCTGAGGATGCCA +
Preference number: 2 (lower is better)
Translates to: LAKTSFPLSALFSETVNNTHEPR*SSLRMP
Trigger: TGGCATCCTCAGAGAGCTCCACCTTGGCTCATGTGT...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCACTTGGGGAAGAGCTTaGGGTTGGCCAGATCACTGG +
Preference number: 2 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITTWGRA*GWPDHW
Trigger: CCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR GCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCTTGAGATTCCAGGGCTaGCCAGGAGGTACAGAGACA +
Preference number: 2 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPLRFQG*PGGTET
Trigger: TGTCTCTGTACCTCCTGGGCAGCCCTGGAATCTCAA...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR GCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTACATCTCCCAGCAGCTaGCAGTTCTATCTTAGCAGA +
Preference number: 2 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPTSPSS*QFYLSR
Trigger: TCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGT...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGCAGCTCCCTGCAGGCTaGCGTCACCCAGGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLQLPAG*RHPGSR
Trigger: CCTACTTCCTGGGTGACGCCAGCCTGCAGGGAGCTG...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR GCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACCCTTTCATTAAACTCTaGTTGTCAGTCACTACAGGC +
Preference number: 2 (lower is better)
Translates to: LAKTSFPLSALFSETVNNPFIKL*LSVTTG
Trigger: GCCTGTAGTGACTGACAAGCAGAGTTTAATGAAAGG...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATACTCTCTCCTGGGAATTaGCAACAGGGAACAAGGACA +
Preference number: 2 (lower is better)
Translates to: HVFKHLGKSLRLARSLAILSPGN*QQGTRT
Trigger: TGTCCTTGTTCCCTGTTGCCAATTCCCAGGAGAGAG...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 90 bp CAAGAAGGGACTCTTGGAATTGTATCAGCCCATGTCTTCAAACACTaGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATACACATG +
Preference number: 2 (lower is better)
Translates to: QEGTLGIVSAHVFKH*GKSLRLARSLAIHM
Trigger: CATGTGTATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGCTGATACAATTCCAAGAGTCCCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR TCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATAACAGTACCATGGTCTTaGAGCTCACTTGTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: HVFKHLGKSLRLARSLAITVPWS*SSLVAS
Trigger: AGAAGCTACAAGTGAGCTTCAAGACCATGGTACTGT...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCACATGGACAGCAATGTaGAAACTGGAATCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITTWTAM*KLESRN
Trigger: GTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp CCCTACCTAGGAGCCGGAGAGAGCTTGCCAACCTCATaGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGA +
Preference number: 3 (lower is better)
Translates to: PYLGAGESLPTS*WPSVGVRGPFR
Trigger: TCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTTGGCAAGCTCTCTCCGGCTCCTAGGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CTAGGTCCCAGGCCTACAAGGCAGGTCCAATGGGGCTaGGGCTATGAGCTGGTGCCACCAAGAGACTGGGAG +
Preference number: 3 (lower is better)
Translates to: LGPRPTRQVQWG*GYELVPPRDWE
Trigger: CTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAGGCCTGGGACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp AGTCACCAGGCTTGGGGCAGGCCTAGCACTACCCACTaGACCACTAGGTCCCAGGCCTACAAGGCAGGTCCA +
Preference number: 3 (lower is better)
Translates to: SHQAWGRPSTTH*TTRSQAYKAGP
Trigger: TGGACCTGCCTTGTAGGCCTGGGACCTAGTGGTTCAGTGGGTAGTGCTAGGCCTGCCCCAAGCCTGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp TACCTAGGAGCCGGAGAGAGCTTGCCAACCTCATGGTaGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: YLGAGESLPTSW*PSVGVRGPFRA
Trigger: TGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTTGGCAAGCTCTCTCCGGCTCCTAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CAGGCCTACAAGGCAGGTCCAATGGGGCTGAGGCTATaGGCTGGTGCCACCAAGAGACTGGGAGCCACCTTT +
Preference number: 3 (lower is better)
Translates to: QAYKAGPMGLRL*AGATKRLGATF
Trigger: AAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp GTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTaGAGCCAATGGCATTCTCAACCGCCAGCTGCCAAG +
Preference number: 3 (lower is better)
Translates to: VELSEDATTLAW*SQWHSQPPAAK
Trigger: CTTGGCAGCTGGCGGTTGAGAATGCCATTGGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp ACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTaGCCAGGAGGTACAGAGACAACAGCAGGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: TKVVASPLRFQG*PGGTETTAGKD
Trigger: GTCTTTGCCTGCTGTTGTCTCTGTACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp CCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATaGCCACATCTCCCAGCAGCTGCCAGTTCTATCTTA +
Preference number: 3 (lower is better)
Translates to: PSVGVRGPFRAR*PHLPAAASSIL
Trigger: TAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CTGGAAGACAGGGTGGTCCTGAGGCACCAACCCTGCTaGGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: LEDRVVLRHQPC*GSSSLEMHLFL
Trigger: GAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAGCAGGGTTGGTGCCTCAGGACCACCCTGTCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp CAGGAACCCTTACCGCCTCAGAGGACTCCCAAAGACTaGAGAAGCTCAAGCCTGGAGCAGAGGTGTGTCTCT +
Preference number: 3 (lower is better)
Translates to: QEPLPPQRTPKD*RSSSLEQRCVS
Trigger: AGAGACACACCTCTGCTCCAGGCTTGAGCTTCTGCAGTCTTTGGGAGTCCTCTGAGGCGGTAAGGGTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp CTCAGAGGACTCCCAAAGACTGCAGAAGCTCAAGCCTaGAGCAGAGGTGTGTCTCTGTCACCATCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: LRGLPKTAEAQA*SRGVSLSPSLP
Trigger: TGGCAGGGATGGTGACAGAGACACACCTCTGCTCCAGGCTTGAGCTTCTGCAGTCTTTGGGAGTCCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CAGGAAGTGGGCGGGCGGGTTCTCTTCCTTCCTCTGTaGTTCCCAATGGGACATAGGTCAGTGCTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: QEVGGRVLFLPL*FPMGHRSVLKN
Trigger: GTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAGGAAGGAAGAGAACCCGCCCGCCCACTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp TCACTGGCTATACACATGAGCCAAGGTGGAGCTCTCTaGGGATGCCACGACCCTTGCCTGGTGAAGCCAATG +
Preference number: 3 (lower is better)
Translates to: SLAIHMSQGGAL*GCHDPCLVKPM
Trigger: CATTGGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATGTGTATAGCCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp CAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTaGCACCAAGAGACTGGGAGCCACCTTTCATTAAAC +
Preference number: 3 (lower is better)
Translates to: QGRSNGAEAMSW*HQETGSHLSLN
Trigger: GTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTaGTGCCACCAAGAGACTGGGAGCCACCTTTCATTA +
Preference number: 3 (lower is better)
Translates to: LQGRSNGAEAMS*CHQETGSHLSL
Trigger: TAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp GACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTaGCAGGCATGGGGAAGATGGGATCTGACAGAAATA +
Preference number: 3 (lower is better)
Translates to: DCWPSVTVVPHI*QAWGRWDLTEI
Trigger: TATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp TCCTTCCTCTGTGATTCCCAATGGGACATAGGTCAGTaGTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SFLCDSQWDIGQ*SRTVQSPQGPG
Trigger: TCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp TCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTaGAGGGCCTACCAGACATTCTCTGGAAACCTTAAG +
Preference number: 3 (lower is better)
Translates to: SVLKNSTVSPGA*RAYQTFSGNLK
Trigger: CTTAAGGTTTCCAGAGAATGTCTGGTAGGCCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp CCGTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATaGGGAAGATGGGATCTGACAGAAATAGTCACTGTG +
Preference number: 3 (lower is better)
Translates to: PSVTVVPHIWQA*GRWDLTEIVTV
Trigger: CACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CAA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCAGGATGCCACGACCCTaGCCTGGTGAAGCCAATGGC +
Preference number: 3 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITRMPRP*PGEANG
Trigger: GCCATTGGCTTCACCAGGCAAGGGTCGTGGCATCCT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CTTCTATCACAGTGTTCTGTGAGGGTGAGACAGGAGTaGCTCAGAGCACGTTCCATACTCGCCCATCCCATG +
Preference number: 3 (lower is better)
Translates to: LLSQCSVRVRQE*LRARSILAHPM
Trigger: CATGGGATGGGCGAGTATGGAACGTGCTCTGAGTCACTCCTGTCTCACCCTCACAGAACACTGTGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp AAGCCTGGAGCAGAGGTGTGTCTCTGTCACCATCCCTaGCATGTTGACTTAAAAGGTGCCTCCCTTCCTGTA +
Preference number: 3 (lower is better)
Translates to: KPGAEVCLCHHP*HVDLKGASLPV
Trigger: TACAGGAAGGGAGGCACCTTTTAAGTCAACATGGCAGGGATGGTGACAGAGACACACCTCTGCTCCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp GCGGGCGGGTTCTCTTCCTTCCTCTGTGATTCCCAATaGGACATAGGTCAGTGCTCAAGAACAGTACAGTCT +
Preference number: 3 (lower is better)
Translates to: AGGFSSFLCDSQ*DIGQCSRTVQS
Trigger: AGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAGGAAGGAAGAGAACCCGCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CAA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTTCATTAAACTCTGCTaGTCAGTCACTACAGGCATC +
Preference number: 3 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGFIKLC*SVTTGI
Trigger: GATGCCTGTAGTGACTGACAAGCAGAGTTTAATGAA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR-3UTR CAA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGACAAAGGAAGCGAAACTaGAGGTCAAGGAGGATGGAT +
Preference number: 3 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGQRKRN*RSRRMD
Trigger: ATCCATCCTCCTTGACCTCAAGTTTCGCTTCCTTTG...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp GTTGACTTAAAAGGTGCCTCCCTTCCTGTATCTGTCTaGAGTCTAGCCAAGACCTCATTCCCCCTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: VDLKGASLPVSV*SLAKTSFPLSA
Trigger: GGCTGACAGGGGGAATGAGGTCTTGGCTAGACTTCAGACAGATACAGGAAGGGAGGCACCTTTTAAGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp AGCAGAGGTGTGTCTCTGTCACCATCCCTGCCATGTTaGCTTAAAAGGTGCCTCCCTTCCTGTATCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SRGVSLSPSLPC*LKRCLPSCICL
Trigger: CAGACAGATACAGGAAGGGAGGCACCTTTTAAGTCAACATGGCAGGGATGGTGACAGAGACACACCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CCA 72 bp GCTCCTGCCTCAGGTACCTTAACATGGACAGCAATGTaGAAACTGGAATCCAGAAACAGGGTCATGGACCTG +
Preference number: 3 (lower is better)
Translates to: APASGTLTWTAM*KLESRNRVMDL
Trigger: CAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAGGTACCTGAGGCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp TGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTaGGACCCACACTGCCTGGAATCGCCTTTAATAACG +
Preference number: 3 (lower is better)
Translates to: CGNWNPETGSWT*DPHCLESPLIT
Trigger: CGTTATTAAAGGCGATTCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp AGGAAAATACCACAAGGTAGCTACTACACAGGCAGGTaGGTAGCTCTGAGCTCCTGCCTCAGGTACCTTAAC +
Preference number: 3 (lower is better)
Translates to: RKIPQGSYYTGR*VALSSCLRYLN
Trigger: GTTAAGGTACCTGAGGCAGGAGCTCAGAGCTACTCACCTGCCTGTGTAGTAGCTACCTTGTGGTATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR TCA 72 bp CCGCCAGCTGCCAAGTGCACCACAGTACCATGGTCTTaGAGCTCACTTGTAGCTTCTAACAGGAAAATACCA +
Preference number: 3 (lower is better)
Translates to: PPAAKCTTVPWS*SSLVASNRKIP
Trigger: TGGTATTTTCCTGTTAGAAGCTACAAGTGAGCTTCAAGACCATGGTACTGTGGTGCACTTGGCAGCTGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp CCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTaGTTGTCAGTCACTACAGGCATCTACGAAGGTGGT +
Preference number: 3 (lower is better)
Translates to: PPRDWEPPFIKL*LSVTTGIYEGG
Trigger: ACCACCTTCGTAGATGCCTGTAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR GCA 72 bp AATTCATGGAACATGAATGGCAAAGTTACCACGACCTaGAATCAAGGTGGACCCCTTAAAGATGGGGGACAG +
Preference number: 3 (lower is better)
Translates to: NSWNMNGKVTTT*NQGGPLKDGGQ
Trigger: CTGTCCCCCATCTTTAAGGGGTCCACCTTGATTGCAGGTCGTGGTAACTTTGCCATTCATGTTCCATGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTATGGGCCCCAGAGGCTaGGCCGGGAAGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGMGPRG*AGKAWP
Trigger: GGGCCAAGCCTTCCCGGCTCAGCCTCTGGGGCCCAT...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCCGCCGCCTCCTTTGGTaGGCCAATCCAGAACGGGCT +
Preference number: 4 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPRRLLW*ANPERA
Trigger: AGCCCGTTCTGGATTGGCTCACCAAAGGAGGCGGCG...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACCCAGAACGGGCTTCATaGAGCCAGGGGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHPERAS*SQGPLG
Trigger: TCCCAGGGGCCCCTGGCTCCATGAAGCCCGTTCTGG...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGAGAGGTGCGGGGCACTaGGTGGCCACAGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQRGAGH*VATVSA
Trigger: AGCCGAGACTGTGGCCACTCAGTGCCCCGCACCTCT...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTATGGGGCCAGGACCTaGCCATGGGCCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGYGART*PWAPEA
Trigger: AGCCTCTGGGGCCCATGGGCAGGTCCTGGCCCCATA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTGAAGCCGGCAGTGAAAGCAGCTaGCAGAGGGGACCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HEPRWSSLRMPRPLPGEAGSESS*QRGPQG
Trigger: ACCCTGCGGTCCCCTCTGCCAGCTGCTTTCACTGCC...GGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTCCCGGCCCAGCTTGTaGTCGGCCAGGGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGSRPSL*SARVQA
Trigger: TGCTTGCACCCTGGCCGACCACAAGCTGGGCCGGGA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCTGGCAGGCCTGGCACTaGCAAGAAAACCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLWQAWH*QENLPP
Trigger: AGGAGGGAGGTTTTCTTGTCAGTGCCAGGCCTGCCA...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCTGGGTGGGAAAGGGGTaGGTTCATCCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPWVGKG*VHPLQE
Trigger: CTCCTGCAAGGGATGAACTCACCCCTTTCCCACCCA...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACCACTGCAGCTGCATCTaGGGGGAATGGGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHHCSCI*GEWVGG
Trigger: GCCTCCTACCCATTCCCCTCAGATGCAGCTGCAGTG...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACAAGCTCCACAGCCACTaGTCTGGGCCCTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHKLHSH*SGPWSL
Trigger: AAGGGACCAGGGCCCAGAGCAGTGGCTGTGGAGCTT...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTCTCAGGGCCAGGCTCTaGAGGGGACACTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETLRARL*RGHCSC
Trigger: GCAGCTGCAGTGTCCCCTGCAGAGCCTGGCCCTGAG...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAGGTGCCAGGGCCGGATaGCCCCCTCATCTACATCCT +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGGARAG*PPHLHP
Trigger: AGGATGTAGATGAGGGGGGCATCCGGCCCTGGCACC...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACAGCTTGGGGGTCCGGTaGTCGCAGGGCTCGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDSLGVR*SQGSGC
Trigger: ACAACCCGAGCCCTGCGACCACCGGACCCCCAAGCT...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGCAGCCCAGTTCCGGCTaGAAGCTCCACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQQPSSG*KLHSHC
Trigger: GCAGTGGCTGTGGAGCTTCCAGCCGGAACTGGGCTG...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACTGCTCCAGGAGCAGGTaGCAAGGCTGGTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHCSRSR*QGWSPT
Trigger: GGTTGGAGACCAGCCTTGCCACCTGCTCCTGGAGCA...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACCGCCTCCACAGACCCTaGAGTTCGGAAGTGACGTCC +
Preference number: 4 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHRLHRP*SSEVTS
Trigger: GGACGTCACTTCCGAACTCCAGGGTCTGTGGAGGCG...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCGACAAGGGCCACCGTTaGTCCATCTGGGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPDKGHR*SIWDLV
Trigger: TACAAGGTCCCAGATGGAGCAACGGTGGCCCTTGTC...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGACATTCACAGGGCCCGTaGACACCACGGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGHSQGP*TPRLPA
Trigger: AGCTGGAAGCCGTGGTGTCCACGGGCCCTGTGAATG...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGCACTGCTCTGGGCCCTaGTCCCTTGAGCACTCCGAC +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGEHCSGP*SLEHSD
Trigger: GTCGGAGTGCTCAAGGGACCAGGGCCCAGAGCAGTG...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTCTCAGGTGTGGTCGATaGTCCCAAGCCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGLRCGR*SQASGG
Trigger: GCCCCCACTGGCTTGGGACCATCGACCACACCTGAG...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCGAAGCCTCCGCTCAGTaGCCCCAAACAAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLEASAQ*PQTRQS
Trigger: TGACTGTCTTGTTTGGGGCCACTGAGCGGAGGCTTC...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTGAAGCCCGGCACATGAGGAGGTaGGAGGAGTTCACGAGACAC +
Preference number: 4 (lower is better)
Translates to: HEPRWSSLRMPRPLPGEARHMRR*EEFTRH
Trigger: GTGTCTCGTGAACTCCTCCCACCTCCTCATGTGCCG...GGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGCAAGAGTCGGGCCGCTaGGCAAGAGGCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGEQESGR*ARGTPL
Trigger: CAAGGGAGTGCCTCTTGCCCAGCGGCCCGACTCTTG...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTGCCCAGGAGGTTACATCCTCCAGCATTaGGGTCCGTTCCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ASTKVVASPLRFQGCPGGYILQH*GPFPRD
Trigger: GTCCCTGGGGAACGGACCCCAATGCTGGAGGATGTA...ACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp GAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTaGCCTGGTGAAGCCAATGGCATTCTCAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: EPRWSSLRMPRP*PGEANGILNRQ
Trigger: CTGGCGGTTGAGAATGCCATTGGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGCCATCGTACTGCACATaGCCCAAGGAGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQPSYCT*PKEKRR
Trigger: CCTGCGCTTCTCCTTGGGTCATGTGCAGTACGATGG...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCGGGTGTGGGGCTCAGTaGAGCAAAGTCAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPGCGAQ*SKVKDH
Trigger: ATGGTCTTTGACTTTGCTGCACTGAGCCCCACACCC...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACCAAGCCCACTTGGGCTaGCACAGGAAAAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDQAHLG*HRKSHG
Trigger: CCCGTGGCTTTTCCTGTGGCAGCCCAAGTGGGCTTG...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAAGCGGTCCCGTACACTaGTCTCCAGGTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGSGPVH*SPGSPA
Trigger: AGCTGGAGAACCTGGAGAGCAGTGTACGGGACCGCT...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGCCCGAGCAGAGAAGGTaGGCTGACTCTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQPEQRR*ADSPVC
Trigger: ACACACTGGAGAGTCAGCGCACCTTCTCTGCTCGGG...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAAACAGTGAGCAGAGATaGCACGTAGGCACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGNSEQR*HVGTVP
Trigger: CGGGACCGTGCCTACGTGGCATCTCTGCTCACTGTT...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCCCCCACCCCGAAGGCTaGCCCTCCTCGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITPHPEG*PSSAWE
Trigger: CTCCCAGGCCGAGGAGGGGCAGCCTTCGGGGTGGGG...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGAGGAGTGGGCTCTGTTaGCTTGCCACCATAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQRSGLC*LATIGP
Trigger: TGGGCCTATGGTGGCAAGCCAACAGAGCCCACTCCT...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGGAGCCAGGGGCCCCTaGGAAAGTAGTGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGGARGP*ESSVWN
Trigger: GTTCCAGACACTACTTTCCCAGGGGCCCCTGGCTCC...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGAGAGGAGTGTGGAAGTaGAGAAGGCGGGCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQRGVWK*RRRACH
Trigger: GTGACACGCCCGCCTTCTCCACTTCCACACTCCTCT...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGTGCGGGGCACTGAGTaGCCACAGTCTCGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGVRGTE*PQSRLH
Trigger: ATGAAGCCGAGACTGTGGCCACTCAGTGCCCCGCAC...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACCCAAAGGGACACAGCTaGCCATGGGACTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDPKGHS*PWDWVC
Trigger: ACACACCCAGTCCCATGGTCAGCTGTGTCCCTTTGG...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGCACACACAGTCGTACTaGGGCATGGCAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQHTQSY*GMAVWQ
Trigger: CTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTG...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGCAAGGAGGTCACTGGTaGGATCCGTCATCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGQGGHW*DPSSPS
Trigger: TGACGGAGATGACGGATCTCACCAGTGACCTCCTTG...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGGCAGAGAAGGTGCGCTaGCTCTCCAGTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGEAEKVR*LSSVWM
Trigger: CATCCACACACTGGAGAGTCAGCGCACCTTCTCTGC...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTGCCCAGGAGGTTCATACAACACCACATaGAGCCCATCGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ASTKVVASPLRFQGCPGGSYNTT*SPSALS
Trigger: GGACAGTGCCGATGGGCTGCATGTGGTGTTGTATGA...ACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTGGATGTGGCAGGGGCTaGTCCACAGGGGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPGCGRG*STGGSQ
Trigger: CTGTGAGCCCCCTGTGGAGCAGCCCCTGCCACATCC...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTTTGCAGCCACATACTaGGTGTCCCCAGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGFAATY*VSPGRS
Trigger: AGAGCGACCTGGGGACACCCAGTATGTGGCTGCAAA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGAGCACTGGAGCCTCACTaGGGTCTGGGGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGALEPH*GLGRDT
Trigger: TGTGTCCCTCCCCAGACCCCAGTGAGGCTCCAGTGC...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAAGCCCTAGGCTCTATTaGGAAGCTGTTGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGSPRLY*EAVGGR
Trigger: CCTACCCCCAACAGCTTCCCAATAGAGCCTAGGGCT...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGAGTCGTACTGAGGCATaGCAGTTTGGCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGESRTEA*QFGSGC
Trigger: GCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACT...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCCCAGAGTCCCAGGGTaGGCCAGGGAGAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPPRVPG*ARESGS
Trigger: ACTCCCGCTCTCCCTGGCCCACCCTGGGACTCTGGG...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTCAGGGAACGCAGGGTaGGATCAGCCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGSGNAG*DQPHRR
Trigger: TCTCCTATGAGGCTGATCCCACCCTGCGTTCCCTGA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTTCACAGTCCAGATGCTaGGCACAAGGAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETSQSRC*AQGATG
Trigger: TCCTGTGGCTCCTTGTGCTCAGCATCTGGACTGTGA...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAGGAAGGGGCTTCTCATaGAGAGGTGACTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGGRGFS*RGDSVE
Trigger: TTCCACAGAGTCACCTCTTCATGAGAAGCCCCTTCC...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTGAAGCCGGACCCTTGTCCACTTaGTGCTTAATCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HEPRWSSLRMPRPLPGEAGPLST*CLIPLK
Trigger: CTTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCC...GGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACCAGGGCGGCTGGTGCTaGGAATCACCTGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNQGGWC*ESPGTG
Trigger: ACCTGTTCCAGGTGATTCTCAGCACCAGCCGCCCTG...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTGCCCAGGAGGTTTGTGTGTGCACAGCTaGTGCCACACACACCAGTTA +
Preference number: 4 (lower is better)
Translates to: ASTKVVASPLRFQGCPGGLCVHS*CHTHQL
Trigger: TAACTGGTGTGTGTGGCAGCAGCTGTGCACACACAA...ACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACCCACGGTCTCTGTCCTaGGCAGCATCAGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNPRSLS*AASAWG
Trigger: ACCCCAAGCTGATGCTGCGCAGGACAGAGACCGTGG...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTCCGGCCCAGAACACCTaGAGAAGAACTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPPAQNT*RRTGPR
Trigger: CCTCGGCCCAGTTCTTCTCCAGGTGTTCTGGGCCGG...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTCATAGAGGGTACCTGTaGTGGGGTCCCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGHRGYL*WGPLPS
Trigger: ACTTGGCAAGGGACCCCACCACAGGTACCCTCTATG...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTGAAGCCGGGTTGTTAGTAGGCTaGGCTTGGGGACATTCATCA +
Preference number: 4 (lower is better)
Translates to: HEPRWSSLRMPRPLPGEAGLLVG*AWGHSS
Trigger: TGATGAATGTCCCCAAGCCCAGCCTACTAACAACCC...GGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACTCCCCTACCAATCCCTaGGCCACCAGCCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNSPTNP*ATSPTV
Trigger: TACAGTGGGGCTGGTGGCCCAGGGATTGGTAGGGGA...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCACATCACACCAGAACTaGTCAGTAGAGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLTSHQN*SVEQDS
Trigger: AGAGTCCTGCTCTACTGACCAGTTCTGGTGTGATGT...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACTGGGAAAGTAGTGTCTaGAACAGTGCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDWESSV*NSARGL
Trigger: CAGCCCCCTGGCACTGTTCCAGACACTACTTTCCCA...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGTGCTGGCACTTGATGTaGCACCAGACATCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGECWHLM*HQTSGG
Trigger: GCCTCCAGATGTCTGGTGCCACATCAAGTGCCAGCA...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp TCACTACAGGCATCTACGAAGGTGGTGGCCTCTCCCTaGAGATTCCAGGGCTGCCCAGGAGGTACAGAGACA +
Preference number: 4 (lower is better)
Translates to: SLQASTKVVASP*RFQGCPGGTET
Trigger: TGTCTCTGTACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGCCTGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTGCCACAGCTGTTAGCTaGACCCCTGGTAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AHVFKHLGKSLRLARSLAATAVS*TPGSSR
Trigger: TCTGGAGCTACCAGGGGTTCAGCTAACAGCTGTGGC...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTCAGGAGCTCACCCTCTaGTTCACCTCTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPQELTL*FTSPSS
Trigger: GGAGCTGGGAGAGGTGAATCAGAGGGTGAGCTCCTG...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTTGCCCATCTGTACCGTaGACTCAGGCAAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGCPSVP*TQAKHL
Trigger: CAGATGCTTTGCCTGAGTTCACGGTACAGATGGGCA...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTACGAGGCCTTGTGTGTaGACAGCTGCTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: AHVFKHLGKSLRLARSLATRPCV*TAAATH
Trigger: GTGTGTGGCAGCAGCTGTGCACACACAAGGCCTCGT...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCCAGCACACACTCGCTaGTCCTCGGGCCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPPAHTR*SSGHPG
Trigger: TCCAGGATGGCCCGAGGAGCAGCGAGTGTGTGCTGG...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp ATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGAGAGGAACAGCCCCACCTaGAGTTCTGGCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: MPTSPSSCQFYLSRGAGERNSPT*SSGFKA
Trigger: AGCTTTGAAGCCAGAACTGCAGGTGGGGCTGTTCCT...CTCACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTCAGTTTGGCAGCGGCTaGAGTCCCCATGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPQFGSG*SPHVPQ
Trigger: CTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTG...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGGAGTGTATTTGGCTTTaGCAGTCACACTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQECIWL*QSHCPR
Trigger: CCGTGGACAGTGTGACTGGCAAAGCCAAATACACTC...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGAAGCCCAGGGCTCAACTaGAACAGGAAGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGSPGLN*NRKLVA
Trigger: GGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCT...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GTCTGTGACTGTGGTTCCCCACATCTGGCAGGCATGGGGAAGATGGGATCTGACCTCACCAGGAGCAGCTaGTTAGGGTTGTTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VCDCGSPHLAGMGKMGSDLTRSS*LGLLVG
Trigger: GCCTACTAACAACCCTAACCAGCTGCTCCTGGTGAG...GTCAGATCCCATCTTCCCCATGCCTGCCAGATGTGGGGAACCACAGTCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTCACCACCAGAGCCTCTaGGCTCACCAGGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSHHQSL*AHQEQL
Trigger: CAGCTGCTCCTGGTGAGCCCAGAGGCTCTGGTGGTG...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACAGAGAACACACTCCCTaGCTTGTGCCGGAACGGCGT +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNREHTP*LVPERR
Trigger: ACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCTCT...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATAACCACGGCTTCCAGCTaGAGCCCAGGGCTCAACTGG +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAITTASS*SPGLNW
Trigger: CCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGGT...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCAGAAGGAGAGGGAGGTaGTGGCGATCACCACGGCAC +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPRRRGR*WRSPRH
Trigger: GTGCCGTGGTGATCGCCAGCACCTCCCTCTCCTTCT...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTAACAGGCCCGGCACGGTaGAGATGGGGAAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLTGPAR*RWGRRS
Trigger: ACTGCGTCTTCCCCATCTGCACCGTGCCGGGCCTGT...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTTCCAGGCACCTCCACTaGCACAGTGCCAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSSRHLH*HSASHL
Trigger: GAGGTGACTGGCACTGTGGCAGTGGAGGTGCCTGGA...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTCAAACTTCTGCAGTGTaGCCTTCATGGATAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETQTSAV*PSWIAG
Trigger: GCCTGCTATCCATGAAGGGCACACTGCAGAAGTTTG...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTATCCATGAAGGTCTGTaGAATGACCAGGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGIHEGL*NDQEHS
Trigger: GCTGTGCTCCTGGTCATTGCACAGACCTTCATGGAT...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTGCACTCACGAAGTGGTaGCTGTACTCGGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSALTKW*LYSDRR
Trigger: CCGCCTGTCCGAGTACAGCCACCACTTCGTGAGTGC...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTGGGGCCAATCCACAGTaGGAGGAGCCACTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSGANPQ*EEPLRR
Trigger: TCTCCTCAGTGGCTCCTCCCACTGTGGATTGGCCCC...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACGTGGTCAGAGCCACATaGAAAAGCATCCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNVVRAT*KSIRGV
Trigger: GACACCCCGGATGCTTTTCCATGTGGCTCTGACCAC...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGGCTCTGTTTAGAATATaGGGCAGCACTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGALFRI*GSTSSR
Trigger: CCTGGAAGAAGTGCTGCCCCATATTCTAAACAGAGC...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTAGTGGGAGGAGCCACTaGGGAGAAAGCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPSGRSH*GESCKE
Trigger: CTCTTTGCAGCTTTCTCCTCAGTGGCTCCTCCCACT...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTCGGGAGTGCGGCACATaGGGAGGTGGGAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPRECGT*GGGRSS
Trigger: TGAACTCCTCCCACCTCCTCATGTGCCGCACTCCCG...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATATGGTCGGCTCCTCTCTaGAGCACTGGAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAIWSAPL*STGASL
Trigger: CAGTGAGGCTCCAGTGCTGCAGAGAGGAGCCGACCA...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTAGCAGGAGGGCCCTCGTaGTCTGCTGAGTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLAGGPS*SAESPS
Trigger: TGATGGAGACTCAGCAGAGCACGAGGGCCCTCCTGC...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTACGAGTGAATGAGAGGTaGGGGGCACTGAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLRVNER*GALSGH
Trigger: GTGGCCACTCAGTGCCCCGCACCTCTCATTCACTCG...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGAGGAACAGGAAGTTGGTaGCCCCTACATAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGGTGSW*PLHRGY
Trigger: GTACCCTCTATGTAGGGGCCACCAACTTCCTGTTCC...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCTCCTCTCTGCAGCACTaGAGCCTCACTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITSSLQH*SLTGVW
Trigger: CCAGACCCCAGTGAGGCTCCAGTGCTGCAGAGAGGA...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGGCCAGGACCTGCCCATaGGCCCCAGAGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLARTCP*APEAEP
Trigger: CGGCTCAGCCTCTGGGGCCCATGGGCAGGTCCTGGC...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGGTCCAGAGCCACCATaGAAGGCAGAGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPGPEPP*KAEPQG
Trigger: GCCCTGAGGCTCTGCCTTCCATGGTGGCTCTGGACC...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCATCAGCAAGGAGCCCTaGACGGTCTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITISKEP*TVSTQG
Trigger: CCCCTGTGTGGAGACCGTCCAGGGCTCCTTGCTGAT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTCATAGGAGAAGGGTGTaGGGCTCAGTGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: AHVFKHLGKSLRLARSLAHRRRV*GSVQQS
Trigger: ACTTTGCTGCACTGAGCCCCACACCCTTCTCCTATG...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGAGGCTCACAGTACAGGTaGTTCCGGGTCAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGGSQYR*FRVSVF
Trigger: AAAGACACTGACCCGGAACCACCTGTACTGTGAGCC...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCTCAGGCAAAGCATCTaGAGCCTCTCGGAGGGCATG +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPLRQSI*SLSEGM
Trigger: CATGCCCTCCGAGAGGCTCCAGATGCTTTGCCTGAG...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTTCAGCTTGGGGTTCTTaGCAACATACTGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGSAWGS*QHTELP
Trigger: TGGTAGCTCAGTATGTTGCCAAGAACCCCAAGCTGA...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCTTCACAGGTACACACTaGGCTTCTCCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPFTGTH*ASPAPG
Trigger: GCCTGGGGCAGGAGAAGCCCAGTGTGTACCTGTGAA...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACACTGAGTTCATCTCTTaGTCACTGGCCGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNTEFIS*SLAGTV
Trigger: GACTGTCCCGGCCAGTGACCAAGAGATGAACTCAGT...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCGTGAAGTGCAACAGTaGGCAGAGATGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPREVQQ*AEMPRR
Trigger: CCTACGTGGCATCTCTGCTCACTGTTGCACTTCACG...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGAAAGGACATCGTATaGAATGTCAGCAACCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETGKDIV*NVSNLG
Trigger: ACCAAGGTTGCTGACATTGCATACGATGTCCTTTCC...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGTACAGCCCCAGCGGCTaGTCACACAGGCCCGGCACG +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLYSPSG*SHRPGT
Trigger: CGTGCCGGGCCTGTGTGAGCAGCCGCTGGGGCTGTA...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGCCAGGAGAGACGTaGCCACTCCCAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPEPGET*PLPSPL
Trigger: AAGTGGGCTTGGGAGTGGGCACGTCTCTCCTGGCTC...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTGGCCCACTGCTAACTTaGCTGTTTCTTCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGGPLLT*LFLHKR
Trigger: TCTCTTATGAAGAAACAGCCAAGTTAGCAGTGGGCC...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCGCTCCAGAATTGGCGTaGCTTCCAAAGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPAPELA*LPKGHS
Trigger: GCTGTGTCCCTTTGGAAGCCACGCCAATTCTGGAGC...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTATGGTCCCAAGCCAGTaGGGGCAGGGACAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPMVPSQ*GQGQWF
Trigger: GAACCACTGTCCCTGCCCCCACTGGCTTGGGACCAT...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATAACATCCTGCACATGTTaGCCCAGGTTGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAITSCTC*PRLEPL
Trigger: CAGGGGCTCCAACCTGGGCCAACATGTGCAGGATGT...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTACTGGCCATGCTGTCTTaGGACCACGGTCACTCGGAT +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLLAMLS*DHGHSD
Trigger: ATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAG...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATATTCTGTGCAAGCCCCTaGCCATGCTGTCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAIFCASP*PCCLGT
Trigger: GGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAA...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTATGCTGTTTAGCAGGTTaGAGAGCTGCCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLCCLAG*RAAPGP
Trigger: AGGGCCTGGGGCAGCTCTCCAACCTGCTAAACAGCA...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACTATTCAAGCTTCCCGTaGAGTGCAACAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAKTSFPLSALFSETVNNYSSFP*SATVSR
Trigger: TCTGCTCACTGTTGCACTTCACGGGAAGCTTGAATA...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTGAGATGCCATGCTGCTaGGCTTGTTCATCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSEMPCC*ACSSSK
Trigger: CTTGCTGGATGAACAAGCTCAGCAGCATGGCATCTC...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGCTCCGCCAAGACTaGGTTCATCTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPQLRQD*VHLLVT
Trigger: AGTGACCAAGAGATGAACTCAGTCTTGGCGGAGCTG...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATACCCCACTGTACTGACTaGAGGGTCATTTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAIPHCTD*RVICSH
Trigger: GTGGCTGCAAATGACCCTGCAGTCAGTACAGTGGGG...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTAGTCTGTCTGATGTCTaGATAGTACCTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGSLSDV*IVPFHH
Trigger: ATGGTGGAAAGGTACTATGCAGACATCAGACAGACT...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTAAAGGCACTCACGAAGTaGTGGCTGTACTCGGACAGG +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLKALTK*WLYSDR
Trigger: CCTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTT...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGATGGAGTGTACTTTTaGATCCTGATAGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETDGVYF*ILIGKA
Trigger: AGCTTTGCCTATCAGGATCCAAAAGTACACTCCATC...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp CCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTaGTCAGTCACTACAGGCATCTACGAAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRDWEPPFIKLC*SVTTGIYEGGG
Trigger: GCCACCACCTTCGTAGATGCCTGTAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTaGGCCAGATCACTGGCTATACACATGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AHVFKHLGKSLR*ARSLAIHMSQG
Trigger: ACCTTGGCTCATGTGTATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCCCTGATAGGCAAAGCTaGACTCTGAGACACCGTGTC +
Preference number: 4 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITPDRQS*TLRHRV
Trigger: GACACGGTGTCTCAGAGTTCAGCTTTGCCTATCAGG...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCACTCCACATCCTCTCTaGGCAGGCGGTTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITTPHPL*AGGCHS
Trigger: TGAATGACAACCGCCTGCTCAGAGAGGATGTGGAGT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTCCGGGACAGTCTGTCTaGTGTCTGCATAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSPGQSV*CLHSTF
Trigger: AAAGGTACTATGCAGACATCAGACAGACTGTCCCGG...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTAGAGGGTACCTGTGGTaGGGTCCCTTGCCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPRGYLW*GPLPSV
Trigger: AACACTTGGCAAGGGACCCCACCACAGGTACCCTCT...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATAACTGGAACAGGAAGTTaGTGGCCCCTACATAGAGGG +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAITGTGS*WPLHRG
Trigger: CCCTCTATGTAGGGGCCACCAACTTCCTGTTCCAGT...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp GTATCAGCCCATGTCTTCAAACACTTGGGGAAGAGCTaGAGGTTGGCCAGATCACTGGCTATACACATGAGC +
Preference number: 4 (lower is better)
Translates to: VSAHVFKHLGKS*RLARSLAIHMS
Trigger: GCTCATGTGTATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGAGCAGGTGGCAAGGCTaGTCTCCAACCACCACACGG +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLSRWQG*SPTTTR
Trigger: CCGTGTGGTGGTTGGAGACCAGCCTTGCCACCTGCT...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTACACCGTTGCTCCATCTaGGACCTTGTAATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLHRCSI*DLVMLQ
Trigger: CTGCAACATTACAAGGTCCCAGATGGAGCAACGGTG...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
3UTR CAA 72 bp ACTCTTGGAATTGTATCAGCCCATGTCTTCAAACACTaGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLGIVSAHVFKH*GKSLRLARSLA
Trigger: AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGCTGATACAATTCCAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp TGCCACCAAGAGACTGGGAGCCACCTTTCATTAAACTCTGCTTGTCAGTCACTAAAAGTAGCAGAAATATaGCTCCCCTGGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: CHQETGSHLSLNSACQSLKVAEI*LPWPER
Trigger: TCTCTCTGGCCAGGGGAGTCATATTTCTGCTACTTT...TAGTGACTGACAAGCAGAGTTTAATGAAAGGTGGCTCCCAGTCTCTTGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp CATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTATAATGTGGATAGTATCCTaGTCAGAGATGCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: HVFKHLGKSLRLARSLAIMWIVS*SEMPCC
Trigger: GCAGCATGGCATCTCTGATCAGGATACTATCCACAT...TATAGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGTGTAGCTGCTCAGACTaGTGCTCCAGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLCSCSD*CSRSRW
Trigger: CCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTACA...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR TCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGGAGCTACCAGGTCACTaGGCAGAGTCCGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLELPGH*AESAVC
Trigger: ACATACTGCGGACTCTGCTCAGTGACCTGGTAGCTC...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp CTGAGGCAGCAGCAGCCTAGAAATGCATCTCTTTCTCTCTCTCTCTCTCTCTCTATGTTATCCGAAGTCTaGACATCGAACACAAACTGT +
Preference number: 4 (lower is better)
Translates to: LRQQQPRNASLSLSLSLSMLSEV*TSNTNC
Trigger: ACAGTTTGTGTTCGATGTGCAGACTTCGGATAACAT...AGAGAGAGAGAGAGAGAGAGAAAGAGATGCATTTCTAGGCTGCTGCTGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGTATCCTGATCAGAGATaGCATGCTGCTGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLYPDQR*HAAELV
Trigger: AACAAGCTCAGCAGCATGGCATCTCTGATCAGGATA...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR GCA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGAAGAGTAGTCTGAGTTaGTACATAGAGATGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLKSSLS*YIEMLK
Trigger: TTTGAGCATCTCTATGTAGCAACTCAGACTACTCTT...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CCCCCTCCACAGAGAACACACTCCCTGGCTTGTGCCGGAACGGCGTaGTGGGATCCTCGGGGTTCAGGGAACGCAGGGTGGGATCAGCCT +
Preference number: 5 (lower is better)
Translates to: PPPQRTHSLACAGTA*WDPRGSGNAGWDQP
Trigger: AGGCTGATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCTCTGTGGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp ACCACTCGAAGACAGCCCAGTTCCGGCTGGAAGCTCCACAGCCACTaGTCTGGGCCCTGGTCCCTTGAGCACTCCGACCGGCGACTACAC +
Preference number: 5 (lower is better)
Translates to: TTRRQPSSGWKLHSH*SGPWSLEHSDRRLH
Trigger: GTGTAGTCGCCGGTCGGAGTGCTCAAGGGACCAGGGCCCAGAGCAGTGGCTGTGGAGCTTCCAGCCGGAACTGGGCTGTCTTCGAGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp TGTTCCACGGTGGGTCGCCTGCTGTCAGGCACACCGAGGTCCCTGTaGAAGGGGGACTCCCGGTACCCAGGGAAGAAGACCCTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSTVGRLLSGTPRSL*KGDSRYPGKKTLSA
Trigger: TGCTGAGAGGGTCTTCTTCCCTGGGTACCGGGAGTCCCCCTTGCACAGGGACCTCGGTGTGCCTGACAGCAGGCGACCCACCGTGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp GCCGGAACGGCGTGCTGGGATCCTCGGGGTTCAGGGAACGCAGGGTaGGATCAGCCTCATAGGAGAAGGGTGTGGGGCTCAGTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: AGTACWDPRGSGNAG*DQPHRRRVWGSVQQ
Trigger: TTGCTGCACTGAGCCCCACACCCTTCTCCTATGAGGCTGATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGCTGGGCCCTGGTCCCTaGAGCACTCCGACCGGCGAC +
Preference number: 5 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQLGPGP*STPTGD
Trigger: GTCGCCGGTCGGAGTGCTCAAGGGACCAGGGCCCAG...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCGAATCCCGGCCCAGCTaGTGGTCGGCCAGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLESRPS*WSARVQ
Trigger: TTGCACCCTGGCCGACCACAAGCTGGGCCGGGATTC...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp CATACTGGGTGTCCCCAGGTCGCTCTGGCCGTAGCAGCAGCTGCCTaGTCTGTCCCAGGCTCCGTAGCTCACAGATGCCCTGGTGTACGC +
Preference number: 5 (lower is better)
Translates to: HTGCPQVALAVAAAA*SVPGSVAHRCPGVR
Trigger: GCGTACACCAGGGCATCTGTGAGCTACGGAGCCTGGGACAGATCAGGCAGCTGCTGCTACGGCCAGAGCGACCTGGGGACACCCAGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp GCCACACAACGCGGACGCTCCCCCTCACACCACACACAGTCGTACTaGGGCATGGCAGTTTGGCAGCGGCTGCAGTCCCCATGTCCCACA +
Preference number: 5 (lower is better)
Translates to: ATQRGRSPSHHTQSY*GMAVWQRLQSPCPT
Trigger: TGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTGAGGGGGAGCGTCCGCGTTGTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 90 bp TCCCGGCTGTCATTCACAGGGCCCGTGGACACCACGGCTTCCAGCTaGAGCCCAGGGCTCAACTGGAACAGGAAGTTGGTGGCCCCTACA +
Preference number: 5 (lower is better)
Translates to: SRLSFTGPVDTTASS*SPGLNWNRKLVAPT
Trigger: TGTAGGGGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGGTGTCCACGGGCCCTGTGAATGACAGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS GCA 90 bp GCCACATACTGGGTGTCCCCAGGTCGCTCTGGCCGTAGCAGCAGCTaGCTGATCTGTCCCAGGCTCCGTAGCTCACAGATGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ATYWVSPGRSGRSSS*LICPRLRSSQMPWC
Trigger: ACACCAGGGCATCTGTGAGCTACGGAGCCTGGGACAGATCAGGCAGCTGCTGCTACGGCCAGAGCGACCTGGGGACACCCAGTATGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp GCCACCATAGGCCCAGCGTCACACGAGGCCTTGTGTGTGCACAGCTaGTGCCACACACACCAGTTACAGCCCCAGCGGCTGCTCACACAG +
Preference number: 5 (lower is better)
Translates to: ATIGPASHEALCVHS*CHTHQLQPQRLLTQ
Trigger: CTGTGTGAGCAGCCGCTGGGGCTGTAACTGGTGTGTGTGGCAGCAGCTGTGCACACACAAGGCCTCGTGTGACGCTGGGCCTATGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CCTCCACAGCCACCTCCCGACTCCCTAGCTCCAGCACACACTCGCTaGTCCTCGGGCCATCCTGGAAAAGCCACAGGTTCCTGCCTCGAA +
Preference number: 5 (lower is better)
Translates to: PPQPPPDSLAPAHTR*SSGHPGKATGSCLE
Trigger: TTCGAGGCAGGAACCTGTGGCTTTTCCAGGATGGCCCGAGGAGCAGCGAGTGTGTGCTGGAGCTAGGGAGTCGGGAGGTGGCTGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CAACACCACATGCAGCCCATCGGCACTGTCCACGCGCAGACCGCCTaGCCAACGCAGGAACAGCCCCACCTGCAGTTCTGGCTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: QHHMQPIGTVHAQTA*PTQEQPHLQFWLQS
Trigger: GCTTTGAAGCCAGAACTGCAGGTGGGGCTGTTCCTGCGTTGGGCAGGCGGTCTGCGCGTGGACAGTGCCGATGGGCTGCATGTGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp ACCCAGAGCCAGGAGAGACGTGCCCACTCCCAAGCCCACTTGGGCTaGCACAGGAAAAGCCACGGGGCTCTCGCCATCGTACTGCACATG +
Preference number: 5 (lower is better)
Translates to: TQSQERRAHSQAHLG*HRKSHGALAIVLHM
Trigger: CATGTGCAGTACGATGGCGAGAGCCCCGTGGCTTTTCCTGTGGCAGCCCAAGTGGGCTTGGGAGTGGGCACGTCTCTCCTGGCTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AGCAGCTGCCTGATCTGTCCCAGGCTCCGTAGCTCACAGATGCCCTaGTGTACGCTCCCACACACCACCAGAGCCTCTGGGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SSCLICPRLRSSQMP*CTLPHTTRASGLTR
Trigger: CCTGGTGAGCCCAGAGGCTCTGGTGGTGTGTGGGAGCGTACACCAGGGCATCTGTGAGCTACGGAGCCTGGGACAGATCAGGCAGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp TCCCAGGGTGGGCCAGGGAGAGCGGGAGTGCGGCACATGAGGAGGTaGGAGGAGTTCACGAGACACGGCTCCTCAAATTTCTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: SQGGPGRAGVRHMRR*EEFTRHGSSNFSGT
Trigger: GGTCCCTGAGAAATTTGAGGAGCCGTGTCTCGTGAACTCCTCCCACCTCCTCATGTGCCGCACTCCCGCTCTCCCTGGCCCACCCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp CCTCCACAGAGAACACACTCCCTGGCTTGTGCCGGAACGGCGTGCTaGGATCCTCGGGGTTCAGGGAACGCAGGGTGGGATCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: PPQRTHSLACAGTAC*DPRGSGNAGWDQPH
Trigger: ATGAGGCTGATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCTCTGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp CATGGCGAGGTCCAGATTCTCCCCCTCCACAGAGAACACACTCCCTaGCTTGTGCCGGAACGGCGTGCTGGGATCCTCGGGGTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: HGEVQILPLHREHTP*LVPERRAGILGVQG
Trigger: TCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCTCTGTGGAGGGGGAGAATCTGGACCTCGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp ATGACACCCAGAGCCAGGAGAGACGTGCCCACTCCCAAGCCCACTTaGGCTGCCACAGGAAAAGCCACGGGGCTCTCGCCATCGTACTGC +
Preference number: 5 (lower is better)
Translates to: MTPRARRDVPTPKPT*AATGKATGLSPSYC
Trigger: GCAGTACGATGGCGAGAGCCCCGTGGCTTTTCCTGTGGCAGCCCAAGTGGGCTTGGGAGTGGGCACGTCTCTCCTGGCTCTGGGTGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACCTGAGGCATGGCAGTTaGGCAGCGGCTGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHLRHGS*AAAAVP
Trigger: GGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAG...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp ACCACACGGATGTCCTCTAGCCGTCCAGTCAGGAGCTTAGAACCATaGAGGGTAAGGCGGGTACCTCCAGCTCTAGGGCCACGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TTRMSSSRPVRSLEP*RVRRVPPALGPRAG
Trigger: CCCAGCCCGTGGCCCTAGAGCTGGAGGTACCCGCCTTACCCTGCATGGTTCTAAGCTCCTGACTGGACGGCTAGAGGACATCCGTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 90 bp CCACGGCTTCCAGCTGCAGCCCAGGGCTCAACTGGAACAGGAAGTTaGTGGCCCCTACATAGAGGGTACCTGTGGTGGGGTCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: PRLPAAAQGSTGTGS*WPLHRGYLWWGPLP
Trigger: TGGCAAGGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp GTATCACAGGTGGCAGGCAATCCCGGCTGTCATTCACAGGGCCCGTaGACACCACGGCTTCCAGCTGCAGCCCAGGGCTCAACTGGAACA +
Preference number: 5 (lower is better)
Translates to: VSQVAGNPGCHSQGP*TPRLPAAAQGSTGT
Trigger: TGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGGTGTCCACGGGCCCTGTGAATGACAGCCGGGATTGCCTGCCACCTGTGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp CTGCATCTGAGGGGAATGGGTAGGAGGCCAAGAGGTCCTCAGGTGTaGTCGATGGTCCCAAGCCAGTGGGGGCAGGGACAGTGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LHLRGMGRRPRGPQV*SMVPSQWGQGQWFQ
Trigger: CTGGAACCACTGTCCCTGCCCCCACTGGCTTGGGACCATCGACCACACCTGAGGACCTCTTGGCCTCCTACCCATTCCCCTCAGATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 90 bp AACGCGGACGCTCCCCCTCACACCACACACAGTCGTACTGAGGCATaGCAGTTTGGCAGCGGCTGCAGTCCCCATGTCCCACAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: NADAPPHTTHSRTEA*QFGSGCSPHVPQSS
Trigger: ACTGCTCTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTGAGGGGGAGCGTCCGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS-3UTR CAA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCCTCAGGGACCACGTGTaGCTTCTGTGCAAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPLRDHV*LLCKPL
Trigger: CAGGGGCTTGCACAGAAGCAACACGTGGTCCCTGAG...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp CGCCCCAAGGTCGGCAGAGCAGTTCCGGGACAGCTCCGCCAAGACTaGGTTCATCTCTTGGTCACTGGCCGGGACAGTCTGTCTGATGTC +
Preference number: 5 (lower is better)
Translates to: RPKVGRAVPGQLRQD*VHLLVTGRDSLSDV
Trigger: GACATCAGACAGACTGTCCCGGCCAGTGACCAAGAGATGAACTCAGTCTTGGCGGAGCTGTCCCGGAACTGCTCTGCCGACCTTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp ACACCAGTTACAGCCCCAGCGGCTGCTCACACAGGCCCGGCACGGTaGAGATGGGGAAGACGCAGTAACTGCCACGCAGTCATAGAAGGA +
Preference number: 5 (lower is better)
Translates to: TPVTAPAAAHTGPAR*RWGRRSNCHAVIEG
Trigger: TCCTTCTATGACTGCGTGGCAGTTACTGCGTCTTCCCCATCTGCACCGTGCCGGGCCTGTGTGAGCAGCCGCTGGGGCTGTAACTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp GGAAGTTCAGCAGGCACAGGGTATGGGCCGGTCTCACAGTGTAGCTaGTCAGACTGCTGCTCCAGGAGCAGGTGGCAAGGCTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSSAGTGYGPVSQCS*SDCCSRSRWQGWSP
Trigger: TGGAGACCAGCCTTGCCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTACACTGTGAGACCGGCCCATACCCTGTGCCTGCTGAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 90 bp CGGCTTCCAGCTGCAGCCCAGGGCTCAACTGGAACAGGAAGTTGGTaGCCCCTACATAGAGGGTACCTGTGGTGGGGTCCCTTGCCAAGT +
Preference number: 5 (lower is better)
Translates to: RLPAAAQGSTGTGSW*PLHRGYLWWGPLPS
Trigger: ACTTGGCAAGGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp ACCAGCCCCACTGTACTGACTGCAGGGTCATTTGCAGCCACATACTaGGTGTCCCCAGGTCGCTCTGGCCGTAGCAGCAGCTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: TSPTVLTAGSFAATY*VSPGRSGRSSSCLI
Trigger: GATCAGGCAGCTGCTGCTACGGCCAGAGCGACCTGGGGACACCCAGTATGTGGCTGCAAATGACCCTGCAGTCAGTACAGTGGGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp CAGTGTAGCTGCTCAGACTGCTGCTCCAGGAGCAGGTGGCAAGGCTaGTCTCCAACCACCACACGGATGTCCTCTAGCCGTCCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: QCSCSDCCSRSRWQG*SPTTTRMSSSRPVR
Trigger: CCTGACTGGACGGCTAGAGGACATCCGTGTGGTGGTTGGAGACCAGCCTTGCCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTACACTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS-3UTR CAA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGAACACACTCCCTGGCTaGTGCCGGAACGGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGNTLPG*CRNGVL
Trigger: CAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTT...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CATGAGCCAAGGTGGAGCTCTCTGAGGATGCCACGACCCTTGCCTGGTGAAGCCCACTCCCAAGCCCACTaGGGCTGCCACAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: HEPRWSSLRMPRPLPGEAHSQAH*GCHRKS
Trigger: GCTTTTCCTGTGGCAGCCCAAGTGGGCTTGGGAGTG...GGCTTCACCAGGCAAGGGTCGTGGCATCCTCAGAGAGCTCCACCTTGGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp CATCATACTCCCCAGCATCCACAGCGCAGGGAACTCCGGCCACTCTaGCCATGTCCAGGACATCCTGCACATGTTGGCCCAGGTTGGAGC +
Preference number: 5 (lower is better)
Translates to: HHTPQHPQRRELRPL*PCPGHPAHVGPGWS
Trigger: GCTCCAACCTGGGCCAACATGTGCAGGATGTCCTGGACATGGTCAGAGTGGCCGGAGTTCCCTGCGCTGTGGATGCTGGGGAGTATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 90 bp CACACTCGCTGCTCCTCGGGCCATCCTGGAAAAGCCACAGGTTCCTaGCTCGAAGCTGGACTTCGCGTTCCACATGGACCGGTATCAGCA +
Preference number: 5 (lower is better)
Translates to: HTRCSSGHPGKATGS*LEAGLRVPHGPVSA
Trigger: TGCTGATACCGGTCCATGTGGAACGCGAAGTCCAGCTTCGAGGCAGGAACCTGTGGCTTTTCCAGGATGGCCCGAGGAGCAGCGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp GCCCCTGATAGTGACACGGGTGCCTCCATCTATAGGTCCAGTCAGTaGATCCACCGAGTGAATGAGAGGTGCGGGGCACTGAGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: APDSDTGASIYRSSQ*IHRVNERCGALSGH
Trigger: GTGGCCACTCAGTGCCCCGCACCTCTCATTCACTCGGTGGATCCACTGACTGGACCTATAGATGGAGGCACCCGTGTCACTATCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 90 bp GGAACTCCGGCCACTCTGACCATGTCCAGGACATCCTGCACATGTTaGCCCAGGTTGGAGCCCCTGATAGTGACACGGGTGCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: GTPATLTMSRTSCTC*PRLEPLIVTRVPPS
Trigger: AGATGGAGGCACCCGTGTCACTATCAGGGGCTCCAACCTGGGCCAACATGTGCAGGATGTCCTGGACATGGTCAGAGTGGCCGGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 90 bp AGTGCAGCAAAGTCAAAGACCATGTTGTCGAGGATAAACTCCACCTaGACCCCAGAGTCCCAGGGTGGGCCAGGGAGAGCGGGAGTGCGG +
Preference number: 5 (lower is better)
Translates to: SAAKSKTMLSRINST*TPESQGGPGRAGVR
Trigger: CCGCACTCCCGCTCTCCCTGGCCCACCCTGGGACTCTGGGGTCCAGGTGGAGTTTATCCTCGACAACATGGTCTTTGACTTTGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CATTCTCTGGAAACCTTAAGTCCCCAGCTCCCTGCAGGCTGGCGTCACCCAGGAAGGAGTGACCGTGGTTaGGGGGACTGTGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: HSLETLSPQLPAGWRHPGRSDRG*GDCGWE
Trigger: TTCCCACCCACAGTCCCCCAAACCACGGTCACTCCT...TCCTGGGTGACGCCAGCCTGCAGGGAGCTGGGGACTTAAGGTTTCCAGAGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCTCTATTGGGAAGCTGTaGGGGGTAGGAGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLSIGKL*GVGVTV
Trigger: CACGGTCACTCCTACCCCCAACAGCTTCCCAATAGA...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGATCTCAGGGATAGCCTaGGCTCGCTCACGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQISGIA*ARSRSP
Trigger: TGGGGAGCGTGAGCGAGCCAAGGCTATCCCTGAGAT...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp GCAGGCCTGGCACTGACAAGAAAACCTCCCTCCTCTCTTCCCGACTaGTATTGGCAGGGCTCACGGCCACCACTCGAAGACAGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: AGLALTRKPPSSLPD*YWQGSRPPLEDSPV
Trigger: AACTGGGCTGTCTTCGAGTGGTGGCCGTGAGCCCTGCCAATATCAGTCGGGAAGAGAGGAGGGAGGTTTTCTTGTCAGTGCCAGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp ACGCTCCCACACACCACCAGAGCCTCTGGGCTCACCAGGAGCAGCTaGTTAGGGTTGTTAGTAGGCTGGGCTTGGGGACATTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: TLPHTTRASGLTRSS*LGLLVGWAWGHSSG
Trigger: ACCTGATGAATGTCCCCAAGCCCAGCCTACTAACAACCCTAACCAGCTGCTCCTGGTGAGCCCAGAGGCTCTGGTGGTGTGTGGGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp AGTTCATCCCTTGCAGGAGGGATTAGGGGAAGGAGTGGGCTCTGTTaGCTTGCCACCATAGGCCCAGCGTCACACGAGGCCTTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSSLAGGIRGRSGLC*LATIGPASHEALCV
Trigger: CACACACAAGGCCTCGTGTGACGCTGGGCCTATGGTGGCAAGCCAACAGAGCCCACTCCTTCCCCTAATCCCTCCTGCAAGGGATGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AAGCCCCTGGCCATGCTGTCTTGGGACCACGGTCACTCGGATTCTTaGCCTCTGTACCACATCAAGATCCTGGCCGCGGACCCATATCTC +
Preference number: 5 (lower is better)
Translates to: KPLAMLSWDHGHSDS*PLYHIKILAADPYL
Trigger: GAGATATGGGTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTACAAGGCAGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTCTACATCCTCCAGCATaGGGGTCCGTTCCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQGRSNGAEAMSWCHQETLHPPA*GSVPQG
Trigger: TCCCTGGGGAACGGACCCCAATGCTGGAGGATGTAG...AGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCTGCCTTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCACGCAGGTACACGGCCTTCCTCTGCAGGAACCCTTACCGCCTCAGAGGACTCGCATACAGAAGTTTGTaGATGGGAGAATCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: ARRYTAFLCRNPYRLRGLAYRSL*MGESRP
Trigger: GGGCCGGGATTCTCCCATCAACAAACTTCTGTATGC...GAGTCCTCTGAGGCGGTAAGGGTTCCTGCAGAGGAAGGCCGTGTACCTGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp CATAGAAGGAGAGGGAGGTGCTGGCGATCACCACGGCACCAAACCTaGGCTCCACGTTCACAGAGATATGGTCGGCTCCTCTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: HRRRGRCWRSPRHQT*APRSQRYGRLLSAA
Trigger: TGCTGCAGAGAGGAGCCGACCATATCTCTGTGAACGTGGAGCTCAGGTTTGGTGCCGTGGTGATCGCCAGCACCTCCCTCTCCTTCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp AGCTCTAGAAGGGGCCTTCAGGTCTCGCCGCAAGAACAGGAAGTATaGACTGGCCCCGCGTACAAAGGCACTCACGAAGTGGTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SSRRGLQVSPQEQEV*TGPAYKGTHEVVAV
Trigger: TACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCTGTTCTTGCGGCGAGACCTGAAGGCCCCTTCTAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp GTTGTTAGTAGGCTGGGCTTGGGGACATTCATCAGGTATCACAGGTaGCAGGCAATCCCGGCTGTCATTCACAGGGCCCGTGGACACCAC +
Preference number: 5 (lower is better)
Translates to: VVSRLGLGTFIRYHR*QAIPAVIHRARGHH
Trigger: GTGGTGTCCACGGGCCCTGTGAATGACAGCCGGGATTGCCTGCCACCTGTGATACCTGATGAATGTCCCCAAGCCCAGCCTACTAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp TCACGAAGTGGTGGCTGTACTCGGACAGGCGGCCCACTGCTAACTTaGCTGTTTCTTCATAAGAGAAGGCAGCTTGGGGGTCCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SRSGGCTRTGGPLLT*LFLHKRRQLGGPVV
Trigger: GACCACCGGACCCCCAAGCTGCCTTCTCTTATGAAGAAACAGCCAAGTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACCACTTCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AGGAAGTATGCACTGGCCCCGCGTACAAAGGCACTCACGAAGTGGTaGCTGTACTCGGACAGGCGGCCCACTGCTAACTTGGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RKYALAPRTKALTKW*LYSDRRPTANLAVS
Trigger: AGAAACAGCCAAGTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AACAGGAAGTATGCACTGGCCCCGCGTACAAAGGCACTCACGAAGTaGTGGCTGTACTCGGACAGGCGGCCCACTGCTAACTTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: NRKYALAPRTKALTK*WLYSDRRPTANLAV
Trigger: AACAGCCAAGTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp GCGCAGACCGCCTGCCCAACGCAGGAACAGCCCCACCTGCAGTTCTaGCTTCAAAGCTTCATAGCTGAACTGATGCTGCTGGCACTTGAT +
Preference number: 5 (lower is better)
Translates to: AQTACPTQEQPHLQF*LQSFIAELMLLALD
Trigger: ATCAAGTGCCAGCAGCATCAGTTCAGCTATGAAGCTTTGAAGCCAGAACTGCAGGTGGGGCTGTTCCTGCGTTGGGCAGGCGGTCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AGGGACCACGTGTTGCTTCTGTGCAAGCCCCTGGCCATGCTGTCTTaGGACCACGGTCACTCGGATTCTTGGCCTCTGTACCACATCAAG +
Preference number: 5 (lower is better)
Translates to: RDHVLLLCKPLAMLS*DHGHSDSWPLYHIK
Trigger: CTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACGTGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCCCCACTGAGGTGACATaGGGGTCTGATGTATACTTG +
Preference number: 5 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPPTEVT*GSDVYL
Trigger: CAAGTATACATCAGACCCCAATGTCACCTCAGTGGG...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CACACCACACACAGTCGTACTGAGGCATGGCAGTTTGGCAGCGGCTaGAGTCCCCATGTCCCACAGAGCAGTCATACAACACCACATGCA +
Preference number: 5 (lower is better)
Translates to: HTTHSRTEAWQFGSG*SPHVPQSSHTTPHA
Trigger: TGCATGTGGTGTTGTATGACTGCTCTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CGTGAAGTATTCAAGCTTCCCGTGAAGTGCAACAGTGAGCAGAGATaGCACGTAGGCACGGTCCCGAGCAGAGAAGGTGCGCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: REVFKLPVKCNSEQR*HVGTVPSREGALTL
Trigger: GAGAGTCAGCGCACCTTCTCTGCTCGGGACCGTGCCTACGTGGCATCTCTGCTCACTGTTGCACTTCACGGGAAGCTTGAATACTTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp CACACCACACACAGTCGTACTGAGGCATGGCAGTTTGGCAGCGGCTaGAGTCCCCATGTCCCACAGAGCAGTCATACAACACCAACTGCA +
Preference number: 5 (lower is better)
Translates to: HTTHSRTEAWQFGSG*SPHVPQSSHTTPTA
Trigger: TGCAGTTGGTGTTGTATGACTGCTCTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192988.3
CDS CCA 90 bp ACCACGGTCACTCGGATTCTTGGCCTCTGTACCACATCAAGATCCTaGCCGCGGACCCATATCTCACGTCCTCCGCTGAAGAAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: TTVTRILGLCTTSRS*PRTHISRPPLKKLL
Trigger: CAAGAGCTTCTTCAGCGGAGGACGTGAGATATGGGTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp TCCTCAAATTTCTCAGGGACCACGTGTTGCTTCTGTGCAAGCCCCTaGCCATGCTGTCTTGGGACCACGGTCACTCGGATTCTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSNFSGTTCCFCASP*PCCLGTTVTRILGL
Trigger: GAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACGTGGTCCCTGAGAAATTTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTCTGTGGTGGGGTCCCTaGCCAAGTGTTGTAGATGTG +
Preference number: 5 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGLWWGP*PSVVDV
Trigger: CACATCTACAACACTTGGCAAGGGACCCCACCACAG...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AACCTCATGGTGGCCTTCCGTGGGTGTCAGGGGACCCTTCAGAGCACGATGCCCTCTCTGAGCAGGCGGTaGTCATTCAGAGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: NLMVAFRGCQGTLQSTMPSLSRR*SFRVYL
Trigger: CAAATACACTCTGAATGACAACCGCCTGCTCAGAGA...GGGCATCGTGCTCTGAAGGGTCCCCTGACACCCACGGAAGGCCACCATGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AGGTCCAATGGGGCTGAGGCTATGAGCTGGTGCCACCAAGAGACTGGGAGCCACGGGTTCTTGATGATGTaGATCCAGAACCTTAGCGGC +
Preference number: 5 (lower is better)
Translates to: RSNGAEAMSWCHQETGSHGFLMM*IQNLSG
Trigger: GCCGCTAAGGTTCTGGATCAACATCATCAAGAACCC...GTGGCTCCCAGTCTCTTGGTGGCACCAGCTCATAGCCTCAGCCCCATTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp TCCATCTATAGGTCCAGTCAGTGGATCCACCGAGTGAATGAGAGGTaGGGGGCACTGAGTGGCCACAGTCTCGGCTTCATTACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SIYRSSQWIHRVNER*GALSGHSLGFITGF
Trigger: GAAGCCTGTAATGAAGCCGAGACTGTGGCCACTCAGTGCCCCGCACCTCTCATTCACTCGGTGGATCCACTGACTGGACCTATAGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS-3UTR CAA 90 bp CCCACATCTCAGGCCCCAACTCTCCCTGAGCCTTATTGTGCTTTAAGTTCTCCTAAGGAGTGGGCTCTGTaGGCTTGCCACCATAGGCCC +
Preference number: 5 (lower is better)
Translates to: PTSQAPTLPEPYCALSSPKEWAL*ACHHRP
Trigger: GGGCCTATGGTGGCAAGCCAACAGAGCCCACTCCTT...AGGAGAACTTAAAGCACAATAAGGCTCAGGGAGAGTTGGGGCCTGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp AAAAGAGGGCCTGACTGCTGGCCGTCTGTGACTGTGGTTCCCCACATCTGGCAGAGAGTGTATTTGGCTTaGCCAGTCACACTGTCCACG +
Preference number: 5 (lower is better)
Translates to: KRGPDCWPSVTVVPHIWQRVYLA*PVTLST
Trigger: CGTGGACAGTGTGACTGGCAAAGCCAAATACACTCT...CTGCCAGATGTGGGGAACCACAGTCACAGACGGCCAGCAGTCAGGCCCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTGCCCAGGAGGTTGGGACCTTGTAATGTaGCAGTGTATTCAGACGCCT +
Preference number: 5 (lower is better)
Translates to: ASTKVVASPLRFQGCPGGWDLVM*QCIQTP
Trigger: AGGCGTCTGAATACACTGCAACATTACAAGGTCCCA...ACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ACGATGCCCACATCTCCCAGCAGCTGCCAGTTCTATCTTAGCAGAGGGGCTGGTTCCCTAAGAATATGCTaGGTGAGGCAGGGGACAAGG +
Preference number: 5 (lower is better)
Translates to: TMPTSPSSCQFYLSRGAGSLRIC*VRQGTR
Trigger: CCTTGTCCCCTGCCTCACCAAGCATATTCTTAGGGA...ACCAGCCCCTCTGCTAAGATAGAACTGGCAGCTGCTGGGAGATGTGGGCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp GCAATAGTGTGTCCATCCTCCATGGTGACAGCCACAGCTGTTAGCTaGACCCCTGGTAGCTCCAGAATTGGCGTGGCTTCCAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: AIVCPSSMVTATAVS*TPGSSRIGVASKGT
Trigger: TGTCCCTTTGGAAGCCACGCCAATTCTGGAGCTACCAGGGGTTCAGCTAACAGCTGTGGCTGTCACCATGGAGGATGGACACACTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 90 bp AGACCCTGGAGTTCGGAAGTGACGTCCTCATCAGAAAGGATAAGGTaGCCAGCCACTCCAGACCGCCATTCAACATCCAAGGTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: RPWSSEVTSSSERIR*PATPDRHSTSKVQE
Trigger: CTCTTGCACCTTGGATGTTGAATGGCGGTCTGGAGTGGCTGGGCACCTTATCCTTTCTGATGAGGACGTCACTTCCGAACTCCAGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp TCAACTGGAACAGGAAGTTGGTGGCCCCTACATAGAGGGTACCTGTaGTGGGGTCCCTTGCCAAGTGTTGTAGATGTGTGCCATTGGCAG +
Preference number: 5 (lower is better)
Translates to: STGTGSWWPLHRGYL*WGPLPSVVDVCHWQ
Trigger: CTGCCAATGGCACACATCTACAACACTTGGCAAGGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCCTGTTCCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 90 bp CTGGAGCCTCACTGGGGTCTGGGGAGGGACACATCACACCAGAACTaGTCAGTAGAGCAGGACTCTGTTGGTCTCCAAAGTAGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LEPHWGLGRDTSHQN*SVEQDSVGLQSSRN
Trigger: ATTTCTGCTACTTTGGAGACCAACAGAGTCCTGCTCTACTGACCAGTTCTGGTGTGATGTGTCCCTCCCCAGACCCCAGTGAGGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp TGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCCAGGGGCCTGGAGGGTTGGTAAGGAAGAGCTaGCTGTTTAGCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: WDIGQCSRTVQSPQGPGGLVRKS*LFSRLE
Trigger: CTCCAACCTGCTAAACAGCAAGCTCTTCCTTACCAA...CCCTCCAGGCCCCTGGGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCATCTACGAAGGTGGTGGCCTCTCCCTTGAGATTCCAGGGCTGCCCAGGAGGTTCATTCAGAGTGTATTaGGCTTTGCCAGTCACACTG +
Preference number: 5 (lower is better)
Translates to: ASTKVVASPLRFQGCPGGSFRVY*ALPVTL
Trigger: CAGTGTGACTGGCAAAGCCAAATACACTCTGAATGA...ACCTCCTGGGCAGCCCTGGAATCTCAAGGGAGAGGCCACCACCTTCGTAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp GAAGATGGAGTGTACTTTTGGATCCTGATAGGCAAAGCTGAACTCTaGGACACCGTGTCCTCTTCCAGGCACCTCCACTGCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: EDGVYFWILIGKAEL*DTVSSSRHLHCHSA
Trigger: GGCACTGTGGCAGTGGAGGTGCCTGGAAGAGGACACGGTGTCTCAGAGTTCAGCTTTGCCTATCAGGATCCAAAAGTACACTCCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS-3UTR CAA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGATGTAGATGTGTGCCATaGGCAGTGAAAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGCRCVP*AVKAAG
Trigger: GCCAGCTGCTTTCACTGCCAATGGCACACATCTACA...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCTTGCTGTTTAGCAGGTaGGAGAGCTGCCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITLLFSR*ESCPRP
Trigger: GGGCCTGGGGCAGCTCTCCAACCTGCTAAACAGCAA...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GCCCATGTCTTCAAACACTTGGGGAAGAGCTTGAGGTTGGCCAGATCACTGGCTTATAGATCCGTGACCTaGTTTTCCACAGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: AHVFKHLGKSLRLARSLAYRSVT*FSTAAA
Trigger: CGCCGCTGCTGTGGAAAACAAGGTCACGGATCTATA...AGCCAGTGATCTGGCCAACCTCAAGCTCTTCCCCAAGTGTTTGAAGACATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp ACTGAGGTGACATTGGGGTCTGATGTATACTTGAATTGGCCGTGCTaGAGCCTCCGCTCAGTGGCCCCAAACAAGACAGTCACTGGAAGT +
Preference number: 5 (lower is better)
Translates to: TEVTLGSDVYLNWPC*SLRSVAPNKTVTGS
Trigger: ACTTCCAGTGACTGTCTTGTTTGGGGCCACTGAGCGGAGGCTTCAGCACGGCCAATTCAAGTATACATCAGACCCCAATGTCACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGACATCCTGCACATGTaGGCCCAGGTTGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPDILHM*AQVGAP
Trigger: AGGGGCTCCAACCTGGGCCAACATGTGCAGGATGTC...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACGGGACCCTTGTCCACTaGATGCTTAATCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LAKTSFPLSALFSETVNNGTLVH*MLNPSE
Trigger: TTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCCC...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp TGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGAGACCCACACTGCCTGGACGAGCATACAGAAGTTaGTTGATGGGAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: WKLESRNRVMDLRPTLPGRAYRS*LMGESR
Trigger: CCGGGATTCTCCCATCAACAAACTTCTGTATGCTCG...TCCAGGCAGTGTGGGTCTCAGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 90 bp AAGGTACCATCAAAGGTAAGATCTCTGTTCACAGGAGACCCCGGCTaGATGCTCTGTTTAGAATATGGGGCAGCACTTCTTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: KVPSKVRSLFTGDPG*MLCLEYGAALLPGP
Trigger: AGGCCCTGGAAGAAGTGCTGCCCCATATTCTAAACAGAGCATCCAGCCGGGGTCTCCTGTGAACAGAGATCTTACCTTTGATGGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 90 bp TATTTGGCTTTGCCAGTCACACTGTCCACGGGACCCTTGTCCACTTaGTGCTTAATCCCTCTGAAGAGCATATACAGAGGCTCTCCCACA +
Preference number: 5 (lower is better)
Translates to: YLALPVTLSTGPLST*CLIPLKSIYRGSPT
Trigger: TGTGGGAGAGCCTCTGTATATGCTCTTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCCCGTGGACAGTGTGACTGGCAAAGCCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTCTGTGATTCCCAATGGGACATAGGTCAGTGCTCAAGAACAGTACAGTCTCCCGTTAGTAGGCTGGGCTaGGGGACATTCATCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LCDSQWDIGQCSRTVQSPVSRLG*GTFIRY
Trigger: ATACCTGATGAATGTCCCCAAGCCCAGCCTACTAAC...GGGAGACTGTACTGTTCTTGAGCACTGACCTATGTCCCATTGGGAATCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTAGCAGCTGGTTAGGGTaGTTAGTAGGCTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPSSWLG*LVGWAW
Trigger: CCAAGCCCAGCCTACTAACAACCCTAACCAGCTGCT...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCCCTATGCAACTGTCCTaGACTGTCACCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITPMQLS*TVTQES
Trigger: GCTTTCCTGGGTGACAGTCAAGGACAGTTGCATAGG...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTAGCCAAGACCTCATTCCCCCTGTCAGCCCTGTTCTCTGAGACTGTCAACAACAAGTCAAAGACCATGTaGTCGAGGATAAACTCCACC +
Preference number: 5 (lower is better)
Translates to: LAKTSFPLSALFSETVNNKSKTM*SRINST
Trigger: GGTGGAGTTTATCCTCGACAACATGGTCTTTGACTT...GTTGTTGACAGTCTCAGAGAACAGGGCTGACAGGGGGAATGAGGTCTTGGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCCTTAGCGGCAGGCTGTaGGTCTTCCAGATGTGGATA +
Preference number: 5 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITLSGRL*VFQMWI
Trigger: TATCCACATCTGGAAGACCAACAGCCTGCCGCTAAG...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGATAAGAGAAGGCAGCTaGGGGGTCCGGTGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLIREGS*GVRWSQ
Trigger: CTGCGACCACCGGACCCCCAAGCTGCCTTCTCTTAT...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp GTCCATACCATGTGTTATCCTTTAATGAAGAGCTATAGCATCAATGGGTCACTGAGCTCGCCGCCTCCTTaGGTGAGCCAATCCAGAACG +
Preference number: 5 (lower is better)
Translates to: VHTMCYPLMKSYSINGSLSSPPP*VSQSRT
Trigger: CGTTCTGGATTGGCTCACCAAAGGAGGCGGCGAGCT...CAGTGACCCATTGATGCTATAGCTCTTCATTAAAGGATAACACATGGTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp ATCTGGCAGGCATGGGGAAGATGGGATCTGACAGAAATAGTCACTGTGATTACCAGTGTGTGGATGAACTaGGTAAGGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: IWQAWGRWDLTEIVTVITSVWMN*VRKSLL
Trigger: CAGCAAGCTCTTCCTTACCAAGTTCATCCACACACT...GGTAATCACAGTGACTATTTCTGTCAGATCCCATCTTCCCCATGCCTGCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS-3UTR CAA 90 bp CTTAACATGGACAGCAATGTGGAAACTGGAATCCAGAAACAGGGTCATGGACCTGCCATGCTGCTGAGCTaGTTCATCCAGCAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LNMDSNVETGIQKQGHGPAMLLS*FIQQVK
Trigger: TTTGACTTGCTGGATGAACAAGCTCAGCAGCATGGC...AGGTCCATGACCCTGTTTCTGGATTCCAGTTTCCACATTGCTGTCCATGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp ACCCCGAAGGCTGCCCCTCCTCGGCCTGGGAGGCTCTaGTTCATCACTCGGCTTTACCAGGTGCCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: TPKAAPPRPGRL*FITRLYQVPGP
Trigger: CGGCCCTGGCACCTGGTAAAGCCGAGTGATGAACCAGAGCCTCCCAGGCCGAGGAGGGGCAGCCTTCGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp TGGCACCAGACATCTGGAGGCGGCGCACACTCCACCTaGGCCTCCACAGCCACCTCCCGACTCCCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: WHQTSGGGAHST*ASTATSRLPSS
Trigger: GGAGCTAGGGAGTCGGGAGGTGGCTGTGGAGGCTCAGGTGGAGTGTGCGCCGCCTCCAGATGTCTGGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp ACAGCCCCAGCGGCTGCTCACACAGGCCCGGCACGGTaGAGATGGGGAAGACGCAGTAACTGCCACGCAGTC +
Preference number: 6 (lower is better)
Translates to: TAPAAAHTGPAR*RWGRRSNCHAV
Trigger: GACTGCGTGGCAGTTACTGCGTCTTCCCCATCTGCACCGTGCCGGGCCTGTGTGAGCAGCCGCTGGGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp GCTGCTGCCACACACACCAGTTACAGCCCCAGCGGCTaGTCACACAGGCCCGGCACGGTGCAGATGGGGAAG +
Preference number: 6 (lower is better)
Translates to: AAATHTSYSPSG*SHRPGTVQMGK
Trigger: CTTCCCCATCTGCACCGTGCCGGGCCTGTGTGAGCAGCCGCTGGGGCTGTAACTGGTGTGTGTGGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp ATGCAGCCCATCGGCACTGTCCACGCGCAGACCGCCTaGCCAACGCAGGAACAGCCCCACCTGCAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: MQPIGTVHAQTA*PTQEQPHLQFW
Trigger: CCAGAACTGCAGGTGGGGCTGTTCCTGCGTTGGGCAGGCGGTCTGCGCGTGGACAGTGCCGATGGGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GTGGCAGGCAATCCCGGCTGTCATTCACAGGGCCCGTaGACACCACGGCTTCCAGCTGCAGCCCAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: VAGNPGCHSQGP*TPRLPAAAQGS
Trigger: TGAGCCCTGGGCTGCAGCTGGAAGCCGTGGTGTCCACGGGCCCTGTGAATGACAGCCGGGATTGCCTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS TCA 72 bp ACTCATCCGCCTCGGGCAGCTCGCCGCCTCCTTTGGTaGGCCAATCCAGAACGGGCTTCATGGAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: THPPRAARRLLW*ANPERASWSQG
Trigger: CCCCTGGCTCCATGAAGCCCGTTCTGGATTGGCTCACCAAAGGAGGCGGCGAGCTGCCCGAGGCGGATGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp GGCCCAGCGTCACACGAGGCCTTGTGTGTGCACAGCTaGTGCCACACACACCAGTTACAGCCCCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GPASHEALCVHS*CHTHQLQPQRL
Trigger: CAGCCGCTGGGGCTGTAACTGGTGTGTGTGGCAGCAGCTGTGCACACACAAGGCCTCGTGTGACGCTGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp CAGAGAACACACTCCCTGGCTTGTGCCGGAACGGCGTaGTGGGATCCTCGGGGTTCAGGGAACGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: QRTHSLACAGTA*WDPRGSGNAGW
Trigger: CCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GAGGATAAACTCCACCTGGACCCCAGAGTCCCAGGGTaGGCCAGGGAGAGCGGGAGTGCGGCACATGAGGAG +
Preference number: 6 (lower is better)
Translates to: EDKLHLDPRVPG*ARESGSAAHEE
Trigger: CTCCTCATGTGCCGCACTCCCGCTCTCCCTGGCCCACCCTGGGACTCTGGGGTCCAGGTGGAGTTTATCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp TGTCCCCAGGTCGCTCTGGCCGTAGCAGCAGCTGCCTaGTCTGTCCCAGGCTCCGTAGCTCACAGATGCCCT +
Preference number: 6 (lower is better)
Translates to: CPQVALAVAAAA*SVPGSVAHRCP
Trigger: AGGGCATCTGTGAGCTACGGAGCCTGGGACAGATCAGGCAGCTGCTGCTACGGCCAGAGCGACCTGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS GCA 72 bp GGCCCGGCACGGTGCAGATGGGGAAGACGCAGTAACTaGCACGCAGTCATAGAAGGAGAGGGAGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: GPARCRWGRRSN*HAVIEGEGGAG
Trigger: GCCAGCACCTCCCTCTCCTTCTATGACTGCGTGGCAGTTACTGCGTCTTCCCCATCTGCACCGTGCCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp CCACCTCCCGACTCCCTAGCTCCAGCACACACTCGCTaGTCCTCGGGCCATCCTGGAAAAGCCACAGGTTCC +
Preference number: 6 (lower is better)
Translates to: PPPDSLAPAHTR*SSGHPGKATGS
Trigger: GGAACCTGTGGCTTTTCCAGGATGGCCCGAGGAGCAGCGAGTGTGTGCTGGAGCTAGGGAGTCGGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp GCAGGCACAGGGTATGGGCCGGTCTCACAGTGTAGCTaGTCAGACTGCTGCTCCAGGAGCAGGTGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: AGTGYGPVSQCS*SDCCSRSRWQG
Trigger: GCCTTGCCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTACACTGTGAGACCGGCCCATACCCTGTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 72 bp GCCCAGCCACTCCAGACCGCCATTCAACATCCAAGGTaGAAGAGTCGGGCCGCTGGGCAAGAGGCACTCCCT +
Preference number: 6 (lower is better)
Translates to: AQPLQTAIQHPR*KSRAAGQEALP
Trigger: AGGGAGTGCCTCTTGCCCAGCGGCCCGACTCTTGCACCTTGGATGTTGAATGGCGGTCTGGAGTGGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp TGGGTAGGAGGCCAAGAGGTCCTCAGGTGTGGTCGATaGTCCCAAGCCAGTGGGGGCAGGGACAGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: WVGGQEVLRCGR*SQASGGRDSGS
Trigger: GGAACCACTGTCCCTGCCCCCACTGGCTTGGGACCATCGACCACACCTGAGGACCTCTTGGCCTCCTACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp AGGGGAATGGGTAGGAGGCCAAGAGGTCCTCAGGTGTaGTCGATGGTCCCAAGCCAGTGGGGGCAGGGACAG +
Preference number: 6 (lower is better)
Translates to: RGMGRRPRGPQV*SMVPSQWGQGQ
Trigger: CTGTCCCTGCCCCCACTGGCTTGGGACCATCGACCACACCTGAGGACCTCTTGGCCTCCTACCCATTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp TCGCGTTCCACATGGACCGGTATCAGCAAGGAGCCCTaGACGGTCTCCACACAGGGGCAGGAGCTCACCCTC +
Preference number: 6 (lower is better)
Translates to: SRSTWTGISKEP*TVSTQGQELTL
Trigger: GAGGGTGAGCTCCTGCCCCTGTGTGGAGACCGTCCAGGGCTCCTTGCTGATACCGGTCCATGTGGAACGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GCGTGCTGGGATCCTCGGGGTTCAGGGAACGCAGGGTaGGATCAGCCTCATAGGAGAAGGGTGTGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: ACWDPRGSGNAG*DQPHRRRVWGS
Trigger: TGAGCCCCACACCCTTCTCCTATGAGGCTGATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp AGAACACACTCCCTGGCTTGTGCCGGAACGGCGTGCTaGGATCCTCGGGGTTCAGGGAACGCAGGGTGGGAT +
Preference number: 6 (lower is better)
Translates to: RTHSLACAGTAC*DPRGSGNAGWD
Trigger: ATCCCACCCTGCGTTCCCTGAACCCCGAGGATCCCAGCACGCCGTTCCGGCACAAGCCAGGGAGTGTGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp GATGACACCCAGAGCCAGGAGAGACGTGCCCACTCCCAAGCCCACTaGGGCTGCCACAGGAAAAGCCACGGGGCTCTCGCCATCGTACTG +
Preference number: 6 (lower is better)
Translates to: DDTQSQERRAHSQAH*GCHRKSHGALAIVL
Trigger: CAGTACGATGGCGAGAGCCCCGTGGCTTTTCCTGTGGCAGCCCAAGTGGGCTTGGGAGTGGGCACGTCTCTCCTGGCTCTGGGTGTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp CCCCAGCATCCACAGCGCAGGGAACTCCGGCCACTCTaGCCATGTCCAGGACATCCTGCACATGTTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PQHPQRRELRPL*PCPGHPAHVGP
Trigger: TGGGCCAACATGTGCAGGATGTCCTGGACATGGTCAGAGTGGCCGGAGTTCCCTGCGCTGTGGATGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 72 bp GGCCACCAGCCCCACTGTACTGACTGCAGGGTCATTTaGAGCCACATACTGGGTGTCCCCAGGTCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GHQPHCTDCRVI*SHILGVPRSLW
Trigger: CCAGAGCGACCTGGGGACACCCAGTATGTGGCTGCAAATGACCCTGCAGTCAGTACAGTGGGGCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GCTGCAGCCCAGGGCTCAACTGGAACAGGAAGTTGGTaGCCCCTACATAGAGGGTACCTGTGGTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: AAAQGSTGTGSW*PLHRGYLWWGP
Trigger: GGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 72 bp GCACTGGCCCCGCGTACAAAGGCACTCACGAAGTGGTaGCTGTACTCGGACAGGCGGCCCACTGCTAACTTG +
Preference number: 6 (lower is better)
Translates to: ALAPRTKALTKW*LYSDRRPTANL
Trigger: CAAGTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp CCAGCGGCTGCTCACACAGGCCCGGCACGGTGCAGATaGGGAAGACGCAGTAACTGCCACGCAGTCATAGAA +
Preference number: 6 (lower is better)
Translates to: PAAAHTGPARCR*GRRSNCHAVIE
Trigger: TTCTATGACTGCGTGGCAGTTACTGCGTCTTCCCCATCTGCACCGTGCCGGGCCTGTGTGAGCAGCCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp CTTGCAGGAGGGATTAGGGGAAGGAGTGGGCTCTGTTaGCTTGCCACCATAGGCCCAGCGTCACACGAGGCC +
Preference number: 6 (lower is better)
Translates to: LAGGIRGRSGLC*LATIGPASHEA
Trigger: GGCCTCGTGTGACGCTGGGCCTATGGTGGCAAGCCAACAGAGCCCACTCCTTCCCCTAATCCCTCCTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp CCTGGGAAAGTAGTGTCTGGAACAGTGCCAGGGGGCTaGTCCAGAGCCACCATGGAAGGCAGAGCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: PGKVVSGTVPGG*SRATMEGRASG
Trigger: CCCTGAGGCTCTGCCTTCCATGGTGGCTCTGGACCAGCCCCCTGGCACTGTTCCAGACACTACTTTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp CTGATGCTGCTGGCACTTGATGTGGCACCAGACATCTaGAGGCGGCGCACACTCCACCTGAGCCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: LMLLALDVAPDI*RRRTLHLSLHS
Trigger: GCTGTGGAGGCTCAGGTGGAGTGTGCGCCGCCTCCAGATGTCTGGTGCCACATCAAGTGCCAGCAGCATCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GGGCCAGGGAGAGCGGGAGTGCGGCACATGAGGAGGTaGGAGGAGTTCACGAGACACGGCTCCTCAAATTTC +
Preference number: 6 (lower is better)
Translates to: GPGRAGVRHMRR*EEFTRHGSSNF
Trigger: GAAATTTGAGGAGCCGTGTCTCGTGAACTCCTCCCACCTCCTCATGTGCCGCACTCCCGCTCTCCCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp GTCGGCAGAGCAGTTCCGGGACAGCTCCGCCAAGACTaGGTTCATCTCTTGGTCACTGGCCGGGACAGTCTG +
Preference number: 6 (lower is better)
Translates to: VGRAVPGQLRQD*VHLLVTGRDSL
Trigger: CAGACTGTCCCGGCCAGTGACCAAGAGATGAACTCAGTCTTGGCGGAGCTGTCCCGGAACTGCTCTGCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp TCATTCACAGGGCCCGTGGACACCACGGCTTCCAGCTaGAGCCCAGGGCTCAACTGGAACAGGAAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SFTGPVDTTASS*SPGLNWNRKLV
Trigger: CACCAACTTCCTGTTCCAGTTGAGCCCTGGGCTGCAGCTGGAAGCCGTGGTGTCCACGGGCCCTGTGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS GCA 72 bp TGCTCCTCGGGCCATCCTGGAAAAGCCACAGGTTCCTaGCTCGAAGCTGGACTTCGCGTTCCACATGGACCG +
Preference number: 6 (lower is better)
Translates to: CSSGHPGKATGS*LEAGLRVPHGP
Trigger: CGGTCCATGTGGAACGCGAAGTCCAGCTTCGAGGCAGGAACCTGTGGCTTTTCCAGGATGGCCCGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp TATGGGCCGGTCTCACAGTGTAGCTGCTCAGACTGCTaGTCCAGGAGCAGGTGGCAAGGCTGGTCTCCAACC +
Preference number: 6 (lower is better)
Translates to: YGPVSQCSCSDC*SRSRWQGWSPT
Trigger: GGTTGGAGACCAGCCTTGCCACCTGCTCCTGGAGCAGCAGTCTGAGCAGCTACACTGTGAGACCGGCCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp TATGCACTGGCCCCGCGTACAAAGGCACTCACGAAGTaGTGGCTGTACTCGGACAGGCGGCCCACTGCTAAC +
Preference number: 6 (lower is better)
Translates to: YALAPRTKALTK*WLYSDRRPTAN
Trigger: GTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp AGGTTCCTGCCTCGAAGCTGGACTTCGCGTTCCACATaGACCGGTATCAGCAAGGAGCCCTGGACGGTCTCC +
Preference number: 6 (lower is better)
Translates to: RFLPRSWTSRST*TGISKEPWTVS
Trigger: GGAGACCGTCCAGGGCTCCTTGCTGATACCGGTCCATGTGGAACGCGAAGTCCAGCTTCGAGGCAGGAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp CCTGGCACTGACAAGAAAACCTCCCTCCTCTCTTCCCGACTGATATaGGCAGGGCTCACGGCCACCACTCGAAGACAGCCCAGTTCCGGC +
Preference number: 6 (lower is better)
Translates to: PGTDKKTSLLSSRLI*AGLTATTRRQPSSG
Trigger: GCCGGAACTGGGCTGTCTTCGAGTGGTGGCCGTGAGCCCTGCCAATATCAGTCGGGAAGAGAGGAGGGAGGTTTTCTTGTCAGTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp AGAGGGAGGTGCTGGCGATCACCACGGCACCAAACCTaGGCTCCACGTTCACAGAGATATGGTCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: RGRCWRSPRHQT*APRSQRYGRLL
Trigger: GAGGAGCCGACCATATCTCTGTGAACGTGGAGCTCAGGTTTGGTGCCGTGGTGATCGCCAGCACCTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp TACCAATCCCTGGGCCACCAGCCCCACTGTACTGACTaGAGGGTCATTTGCAGCCACATACTGGGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: YQSLGHQPHCTD*RVICSHILGVP
Trigger: GGGGACACCCAGTATGTGGCTGCAAATGACCCTGCAGTCAGTACAGTGGGGCTGGTGGCCCAGGGATTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp AGGGGCCTTCAGGTCTCGCCGCAAGAACAGGAAGTATaGACTGGCCCCGCGTACAAAGGCACTCACGAAGTG +
Preference number: 6 (lower is better)
Translates to: RGLQVSPQEQEV*TGPAYKGTHEV
Trigger: CACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCTGTTCTTGCGGCGAGACCTGAAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp CACACCACCAGAGCCTCTGGGCTCACCAGGAGCAGCTaGTTAGGGTTGTTAGTAGGCTGGGCTTGGGGACAT +
Preference number: 6 (lower is better)
Translates to: HTTRASGLTRSS*LGLLVGWAWGH
Trigger: ATGTCCCCAAGCCCAGCCTACTAACAACCCTAACCAGCTGCTCCTGGTGAGCCCAGAGGCTCTGGTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 72 bp CCTTCAGGTCTCGCCGCAAGAACAGGAAGTATGCACTaGCCCCGCGTACAAAGGCACTCACGAAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: PSGLAARTGSMH*PRVQRHSRSGG
Trigger: GCCACCACTTCGTGAGTGCCTTTGTACGCGGGGCCAGTGCATACTTCCTGTTCTTGCGGCGAGACCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GCCACTCTGACCATGTCCAGGACATCCTGCACATGTTaGCCCAGGTTGGAGCCCCTGATAGTGACACGGGTG +
Preference number: 6 (lower is better)
Translates to: ATLTMSRTSCTC*PRLEPLIVTRV
Trigger: CACCCGTGTCACTATCAGGGGCTCCAACCTGGGCCAACATGTGCAGGATGTCCTGGACATGGTCAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp AAGCCTCCGCTCAGTGGCCCCAAACAAGACAGTCACTaGAAGTTCAGCAGGCACAGGGTATGGGCCGGTCTC +
Preference number: 6 (lower is better)
Translates to: KPPLSGPKQDSH*KFSRHRVWAGL
Trigger: GAGACCGGCCCATACCCTGTGCCTGCTGAACTTCCAGTGACTGTCTTGTTTGGGGCCACTGAGCGGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GCCATGCTGTCTTGGGACCACGGTCACTCGGATTCTTaGCCTCTGTACCACATCAAGATCCTGGCCGCGGAC +
Preference number: 6 (lower is better)
Translates to: AMLSWDHGHSDS*PLYHIKILAAD
Trigger: GTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp AAAGCTGCAAAGAGTACGTCCCCACGGGCCACCTCCTaGGACGTGGCTACAGCTGCAGCCTGGATAAGACCG +
Preference number: 6 (lower is better)
Translates to: KAAKSTSPRATS*DVATAAAWIRP
Trigger: CGGTCTTATCCAGGCTGCAGCTGTAGCCACGTCCAAGGAGGTGGCCCGTGGGGACGTACTCTTTGCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp CTCACACCACACACAGTCGTACTGAGGCATGGCAGTTaGGCAGCGGCTGCAGTCCCCATGTCCCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: LTPHTVVLRHGS*AAAAVPMSHRA
Trigger: TGCTCTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTGTGTGGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CAA 72 bp GGCCACTCTGACCATGTCCAGGACATCCTGCACATGTaGGCCCAGGTTGGAGCCCCTGATAGTGACACGGGT +
Preference number: 6 (lower is better)
Translates to: GHSDHVQDILHM*AQVGAPDSDTG
Trigger: ACCCGTGTCACTATCAGGGGCTCCAACCTGGGCCAACATGTGCAGGATGTCCTGGACATGGTCAGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CAA 72 bp GGCCATGCTGTCTTGGGACCACGGTCACTCGGATTCTaGGCCTCTGTACCACATCAAGATCCTGGCCGCGGA +
Preference number: 6 (lower is better)
Translates to: GHAVLGPRSLGF*ASVPHQDPGRG
Trigger: TCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp CAAGCCCCTGGCCATGCTGTCTTGGGACCACGGTCACTCGGATTCTaGGCCTCTGTACCACATCAAGATCCTGGCCGCGGACCCATATCT +
Preference number: 6 (lower is better)
Translates to: QAPGHAVLGPRSLGF*ASVPHQDPGRGPIS
Trigger: AGATATGGGTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp TCCTGGCCGCGGACCCATATCTCACGTCCTCCGCTGAAGAAGCTCTaGGAGGGGCCCACTGAGGTGACATTGGGGTCTGATGTATACTTG +
Preference number: 6 (lower is better)
Translates to: SWPRTHISRPPLKKL*EGPTEVTLGSDVYL
Trigger: CAAGTATACATCAGACCCCAATGTCACCTCAGTGGGCCCCTCCAAGAGCTTCTTCAGCGGAGGACGTGAGATATGGGTCCGCGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp CAGGGACCACGTGTTGCTTCTGTGCAAGCCCCTGGCCATGCTGTCTaGGGACCACGGTCACTCGGATTCTTGGCCTCTGTACCACATCAA +
Preference number: 6 (lower is better)
Translates to: QGPRVASVQAPGHAV*GPRSLGFLASVPHQ
Trigger: TTGATGTGGTACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACGTGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp AGGTCCAGTCAGTGGATCCACCGAGTGAATGAGAGGTaGGGGGCACTGAGTGGCCACAGTCTCGGCTTCATT +
Preference number: 6 (lower is better)
Translates to: RSSQWIHRVNER*GALSGHSLGFI
Trigger: AATGAAGCCGAGACTGTGGCCACTCAGTGCCCCGCACCTCTCATTCACTCGGTGGATCCACTGACTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 72 bp ATGTCCTCTAGCCGTCCAGTCAGGAGCTTAGAACCATaGAGGGTAAGGCGGGTACCTCCAGCTCTAGGGCCA +
Preference number: 6 (lower is better)
Translates to: MSSSRPVRSLEP*RVRRVPPALGP
Trigger: TGGCCCTAGAGCTGGAGGTACCCGCCTTACCCTGCATGGTTCTAAGCTCCTGACTGGACGGCTAGAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS GCA 72 bp TTCAAGCTTCCCGTGAAGTGCAACAGTGAGCAGAGATaGCACGTAGGCACGGTCCCGAGCAGAGAAGGTGCG +
Preference number: 6 (lower is better)
Translates to: FKLPVKCNSEQR*HVGTVPSREGA
Trigger: CGCACCTTCTCTGCTCGGGACCGTGCCTACGTGGCATCTCTGCTCACTGTTGCACTTCACGGGAAGCTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp TCCAAAGGGACACAGCTGACCATGGGACTGGGTGTGTaGTCAGAGCCACATGGAAAAGCATCCGGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SKGTQLTMGLGV*SEPHGKASGVS
Trigger: GGACACCCCGGATGCTTTTCCATGTGGCTCTGACCACACACCCAGTCCCATGGTCAGCTGTGTCCCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp AGTGACACGGGTGCCTCCATCTATAGGTCCAGTCAGTaGATCCACCGAGTGAATGAGAGGTGCGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: SDTGASIYRSSQ*IHRVNERCGAL
Trigger: CAGTGCCCCGCACCTCTCATTCACTCGGTGGATCCACTGACTGGACCTATAGATGGAGGCACCCGTGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp TTCTCAGGGACCACGTGTTGCTTCTGTGCAAGCCCCTaGCCATGCTGTCTTGGGACCACGGTCACTCGGATT +
Preference number: 6 (lower is better)
Translates to: FSGTTCCFCASP*PCCLGTTVTRI
Trigger: AATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACGTGGTCCCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp GACAAGAAAACCTCCCTCCTCTCTTCCCGACTGATATaGGCAGGGCTCACGGCCACCACTCGAAGACAGCCC +
Preference number: 6 (lower is better)
Translates to: DKKTSLLSSRLI*AGLTATTRRQP
Trigger: GGGCTGTCTTCGAGTGGTGGCCGTGAGCCCTGCCAATATCAGTCGGGAAGAGAGGAGGGAGGTTTTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp CGGACCCATATCTCACGTCCTCCGCTGAAGAAGCTCTaGGAGGGGCCCACTGAGGTGACATTGGGGTCTGAT +
Preference number: 6 (lower is better)
Translates to: RTHISRPPLKKL*EGPTEVTLGSD
Trigger: ATCAGACCCCAATGTCACCTCAGTGGGCCCCTCCAAGAGCTTCTTCAGCGGAGGACGTGAGATATGGGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp CGTGTTGCTTCTGTGCAAGCCCCTGGCCATGCTGTCTaGGGACCACGGTCACTCGGATTCTTGGCCTCTGTA +
Preference number: 6 (lower is better)
Translates to: RVASVQAPGHAV*GPRSLGFLASV
Trigger: TACAGAGGCCAAGAATCCGAGTGACCGTGGTCCCAAGACAGCATGGCCAGGGGCTTGCACAGAAGCAACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp TGTCCATCCTCCATGGTGACAGCCACAGCTGTTAGCTaGACCCCTGGTAGCTCCAGAATTGGCGTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: CPSSMVTATAVS*TPGSSRIGVAS
Trigger: GGAAGCCACGCCAATTCTGGAGCTACCAGGGGTTCAGCTAACAGCTGTGGCTGTCACCATGGAGGATGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp GCACTGACAAGAAAACCTCCCTCCTCTCTTCCCGACTaGTATTGGCAGGGCTCACGGCCACCACTCGAAGAC +
Preference number: 6 (lower is better)
Translates to: ALTRKPPSSLPD*YWQGSRPPLED
Trigger: GTCTTCGAGTGGTGGCCGTGAGCCCTGCCAATATCAGTCGGGAAGAGAGGAGGGAGGTTTTCTTGTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp CACAGTCGTACTGAGGCATGGCAGTTTGGCAGCGGCTaGAGTCCCCATGTCCCACAGAGCAGTCATACAACA +
Preference number: 6 (lower is better)
Translates to: HSRTEAWQFGSG*SPHVPQSSHTT
Trigger: TGTTGTATGACTGCTCTGTGGGACATGGGGACTGCAGCCGCTGCCAAACTGCCATGCCTCAGTACGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CCA 72 bp TGTTTCTTCATAAGAGAAGGCAGCTTGGGGGTCCGGTaGTCGCAGGGCTCGGGTTGTAATGGGAGGAATCCC +
Preference number: 6 (lower is better)
Translates to: CFFIREGSLGVR*SQGSGCNGRNP
Trigger: GGGATTCCTCCCATTACAACCCGAGCCCTGCGACCACCGGACCCCCAAGCTGCCTTCTCTTATGAAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GGTGGCTGTACTCGGACAGGCGGCCCACTGCTAACTTaGCTGTTTCTTCATAAGAGAAGGCAGCTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GGCTRTGGPLLT*LFLHKRRQLGG
Trigger: ACCCCCAAGCTGCCTTCTCTTATGAAGAAACAGCCAAGTTAGCAGTGGGCCGCCTGTCCGAGTACAGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp ACTCGGATTCTTGGCCTCTGTACCACATCAAGATCCTaGCCGCGGACCCATATCTCACGTCCTCCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TRILGLCTTSRS*PRTHISRPPLK
Trigger: CTTCAGCGGAGGACGTGAGATATGGGTCCGCGGCCAGGATCTTGATGTGGTACAGAGGCCAAGAATCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp ACAGAGCAGTCATACAACACCAACTGCAGCTGCATCTaGGGGGAATGGGTAGGAGGCCAAGAGGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TEQSYNTNCSCI*GEWVGGQEVLR
Trigger: CCTGAGGACCTCTTGGCCTCCTACCCATTCCCCTCAGATGCAGCTGCAGTTGGTGTTGTATGACTGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192988.3
CDS GCA 72 bp GTGGTCGGCCAGGGTGCAAGCATCCATGAAGGTCTGTaGAATGACCAGGAGCACAGCATCCATGTTATCCGA +
Preference number: 6 (lower is better)
Translates to: VVGQGASIHEGL*NDQEHSIHVIR
Trigger: TCGGATAACATGGATGCTGTGCTCCTGGTCATTGCACAGACCTTCATGGATGCTTGCACCCTGGCCGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp GGAAGTTGGTGGCCCCTACATAGAGGGTACCTGTGGTaGGGTCCCTTGCCAAGTGTTGTAGATGTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: GSWWPLHRGYLW*GPLPSVVDVCH
Trigger: ATGGCACACATCTACAACACTTGGCAAGGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 72 bp ACAGGAAGTTGGTGGCCCCTACATAGAGGGTACCTGTaGTGGGGTCCCTTGCCAAGTGTTGTAGATGTGTGC +
Preference number: 6 (lower is better)
Translates to: TGSWWPLHRGYL*WGPLPSVVDVC
Trigger: GCACACATCTACAACACTTGGCAAGGGACCCCACCACAGGTACCCTCTATGTAGGGGCCACCAACTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CCA 72 bp CACTGGGGTCTGGGGAGGGACACATCACACCAGAACTaGTCAGTAGAGCAGGACTCTGTTGGTCTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: HWGLGRDTSHQN*SVEQDSVGLQS
Trigger: ACTTTGGAGACCAACAGAGTCCTGCTCTACTGACCAGTTCTGGTGTGATGTGTCCCTCCCCAGACCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp CAGGAGCAGCTGGTTAGGGTTGTTAGTAGGCTGGGCTaGGGGACATTCATCAGGTATCACAGGTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: QEQLVRVVSRLG*GTFIRYHRWQA
Trigger: TGCCTGCCACCTGTGATACCTGATGAATGTCCCCAAGCCCAGCCTACTAACAACCCTAACCAGCTGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072093.13
ENSMUST00000130366.2
ENSMUST00000131462.8
CDS CAA 72 bp GGTGTGGGGCTCAGTGCAGCAAAGTCAAAGACCATGTaGTCGAGGATAAACTCCACCTGGACCCCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: GVGLSAAKSKTM*SRINSTWTPES
Trigger: GGACTCTGGGGTCCAGGTGGAGTTTATCCTCGACAACATGGTCTTTGACTTTGCTGCACTGAGCCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CCA 72 bp AACGCAGGGTGGGATCAGCCTCATAGGAGAAGGGTGTaGGGCTCAGTGCAGCAAAGTCAAAGACCATGTTGT +
Preference number: 6 (lower is better)
Translates to: NAGWDQPHRRRV*GSVQQSQRPCC
Trigger: ACAACATGGTCTTTGACTTTGCTGCACTGAGCCCCACACCCTTCTCCTATGAGGCTGATCCCACCCTGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 72 bp CTGAGCAGGCGGTTGTCATTCAGAGTGTATTTGGCTTaGCCAGTCACACTGTCCACGGGACCCTTGTCCACT +
Preference number: 6 (lower is better)
Translates to: LSRRLSFRVYLA*PVTLSTGPLST
Trigger: AGTGGACAAGGGTCCCGTGGACAGTGTGACTGGCAAAGCCAAATACACTCTGAATGACAACCGCCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp ACATTGGGGTCTGATGTATACTTGAATTGGCCGTGCTaGAGCCTCCGCTCAGTGGCCCCAAACAAGACAGTC +
Preference number: 6 (lower is better)
Translates to: TLGSDVYLNWPC*SLRSVAPNKTV
Trigger: GACTGTCTTGTTTGGGGCCACTGAGCGGAGGCTTCAGCACGGCCAATTCAAGTATACATCAGACCCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp TGTAACGGGGAATATCTCGAGCATACAGAAGTTTGTTaGTGGGAGAATCCCGGCCCAGCTTGTGGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: CNGEYLEHTEVC*WENPGPACGRP
Trigger: TGGCCGACCACAAGCTGGGCCGGGATTCTCCCATCAACAAACTTCTGTATGCTCGAGATATTCCCCGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp AGTTCGGAAGTGACGTCCTCATCAGAAAGGATAAGGTaGCCAGCCACTCCAGACCGCCATTCAACATCCAAG +
Preference number: 6 (lower is better)
Translates to: SSEVTSSSERIR*PATPDRHSTSK
Trigger: CTTGGATGTTGAATGGCGGTCTGGAGTGGCTGGGCACCTTATCCTTTCTGATGAGGACGTCACTTCCGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS CAA 90 bp GTATTTGGCTTTGCCAGTCACACTGTCCACGGGACCCTTGTCCACTaGATGCTTAATCCCTCTGAAGAGCATATACAGAGGCTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: VFGFASHTVHGTLVH*MLNPSEEHIQRLSH
Trigger: GTGGGAGAGCCTCTGTATATGCTCTTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCCCGTGGACAGTGTGACTGGCAAAGCCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp TTGCCAGTCACACTGTCCACGGGACCCTTGTCCACTTaGTGCTTAATCCCTCTGAAGAGCATATACAGAGGC +
Preference number: 6 (lower is better)
Translates to: LPVTLSTGPLST*CLIPLKSIYRG
Trigger: GCCTCTGTATATGCTCTTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCCCGTGGACAGTGTGACTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp AATATGCTTGGTGAGGCAGGGGACAAGGGCCACCGTTaGTCCATCTGGGACCTTGTAATGTTGCAGTGTATT +
Preference number: 6 (lower is better)
Translates to: NMLGEAGDKGHR*SIWDLVMLQCI
Trigger: AATACACTGCAACATTACAAGGTCCCAGATGGAGCAACGGTGGCCCTTGTCCCCTGCCTCACCAAGCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS TCA 72 bp AGATGGAGTGTACTTTTGGATCCTGATAGGCAAAGCTaGACTCTGAGACACCGTGTCCTCTTCCAGGCACCT +
Preference number: 6 (lower is better)
Translates to: RWSVLLDPDRQS*TLRHRVLFQAP
Trigger: AGGTGCCTGGAAGAGGACACGGTGTCTCAGAGTTCAGCTTTGCCTATCAGGATCCAAAAGTACACTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072093.13
ENSMUST00000192988.3
CDS CAA 72 bp TTTGCCAGTCACACTGTCCACGGGACCCTTGTCCACTaGATGCTTAATCCCTCTGAAGAGCATATACAGAGG +
Preference number: 6 (lower is better)
Translates to: FASHTVHGTLVH*MLNPSEEHIQR
Trigger: CCTCTGTATATGCTCTTCAGAGGGATTAAGCATCAAGTGGACAAGGGTCCCGTGGACAGTGTGACTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13
CDS GCA 72 bp AGGAGCCACAGGAACCTTCACAAGAGTAGTCTGAGTTaGTACATAGAGATGCTCAAAGGTACCATCAAAGGT +
Preference number: 6 (lower is better)
Translates to: RSHRNLHKSSLS*YIEMLKGTIKG
Trigger: ACCTTTGATGGTACCTTTGAGCATCTCTATGTAGCAACTCAGACTACTCTTGTGAAGGTTCCTGTGGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072093.13