RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNA3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031398

Ensembl transcript IDs: ENSMUST00000004326.4

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTaGCCTGGCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCC +
Preference number: 1 (lower is better)
Translates to: LTPEISEEGYCPGLA*PGQSEGSFRCIIQP
Trigger: GGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR TCA 90 bp GGTTATAGTTCTCTCAGAGACAACAGGCCCCATGAAAATGTGGTCTaGCTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: GYSSLRDNRPHENVV*LLRYLKRDIALAWP
Trigger: AGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACCACATTTTCATGGGGCCTGTTGTCTCTGAGAGAACTATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CCA 90 bp CCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTaGGAATCTAGTTCATCCATAGCCCAACAGGTCTACCCACTTTCT +
Preference number: 1 (lower is better)
Translates to: PQIIRSLRELHFSPQ*ESSSSIAQQVYPLS
Trigger: AGAAAGTGGGTAGACCTGTTGGGCTATGGATGAACTAGATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR GCA 90 bp GGTCTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGTCATCCCCTCCCCCTaGAGGGCCCAAAGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: GLTPEISEEGYCPGLAWPVIPSP*RAQSKA
Trigger: TGCCTTGCTTTGGGCCCTGCAGGGGGAGGGGATGAC...AGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR CCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATATGTGATGGGGCATCTTaGCTTGGTAACCTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: RRARALLTWEHQGKRVGICDGAS*LGNLPN
Trigger: GTTGGGGAGGTTACCAAGCCAAGATGCCCCATCACA...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CAA 90 bp GGGCCTGACACAGCAAATGTGAGACGCCAGAGGCTGAGCCAAGGCTaGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATC +
Preference number: 2 (lower is better)
Translates to: GPDTANVRRQRLSQG*QCHKGTRTGNRTQI
Trigger: GATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCTCTGGCGTCTCACATTTGCTGTGTCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAGATATTGCCCTGGCCTaGCCTGGCCTGGCCAATCTG +
Preference number: 2 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRDIALA*PGLANL
Trigger: CAGATTGGCCAGGCCAGGCCAGGCCAGGGCAATATC...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR GCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGATCTGAAGAGGGATATTaGCCTGGCCTGGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRSEEGY*PGLAWP
Trigger: AGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGA...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR TCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTAGCCAGACACTCCCCTaGCTGGGAGGATGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSSQTLP*LGGWLR
Trigger: TCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCT...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR CCA 90 bp GTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCCAACACCACCAGCTCTaGATCTCAGCCCTGGAGACC +
Preference number: 2 (lower is better)
Translates to: VTKEPEQETGPRSTKEEVQHHQL*ISALET
Trigger: GGTCTCCAGGGCTGAGATCCAGAGCTGGTGGTGTTG...GACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR CCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAACATTAATAAATAGGTaGGTAGGATGTCAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: ALKDGHVIGQLRLREFRATLINR*VGCQSK
Trigger: CTTGCTCTGACATCCTACCCACCTATTTATTAATGT...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR TCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACATGAAAATGTGGTCTaGCTCCTGAGATATCTGAAG +
Preference number: 2 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRHENVV*LLRYLK
Trigger: CTTCAGATATCTCAGGAGTCAGACCACATTTTCATG...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CCA 72 bp CTGGAGACCCAGGCTAGAGCCAGACACTCCCCTGACTaGGAGGATGGCTCAGAAGCAAGAAGCCCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LETQARARHSPD*EDGSEARSPLL
Trigger: GAGGAGGGGGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CCA 72 bp AACCTCCCCAACACCACCAGCTCTGGATCTCAGCCCTaGAGACCCAGGCTAGAGCCAGACACTCCCCTGACT +
Preference number: 3 (lower is better)
Translates to: NLPNTTSSGSQP*RPRLEPDTPLT
Trigger: AGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAGGGCTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR TCA 72 bp GGGATATTGCCCTGGCCTGGCCTGGCCTGGCCAATCTaGGGGCAGCTTCAGATGCATCATCCAACCCCAAAT +
Preference number: 3 (lower is better)
Translates to: GILPWPGLAWPI*GQLQMHHPTPN
Trigger: ATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGCCAGGCCAGGCCAGGCCAGGGCAATATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR TCA 72 bp GGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTaGCATGGGAACACCAGGGCAAGAGGGTGGGGATAT +
Preference number: 3 (lower is better)
Translates to: GRMSEQGGQGLF*HGNTRARGWGY
Trigger: ATATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CCA 72 bp CTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTaGCCTGGCCTGGCCAATCTGAGGGCAGCTTCAGAT +
Preference number: 3 (lower is better)
Translates to: LLRYLKRDIALA*PGLANLRAASD
Trigger: ATCTGAAGCTGCCCTCAGATTGGCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR-3UTR CAA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAAGAGGGTGGGGATATaGCTGCTGCTAGTGGGGGAA +
Preference number: 3 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLKRVGI*LLLVGE
Trigger: TTCCCCCACTAGCAGCAGCAATATCCCCACCCTCTT...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR TCA 72 bp TCTCTCAGAGACAACAGGCCCCATGAAAATGTGGTCTaGCTCCTGAGATATCTGAAGAGGGATATTGCCCTG +
Preference number: 3 (lower is better)
Translates to: SLRDNRPHENVV*LLRYLKRDIAL
Trigger: CAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACCACATTTTCATGGGGCCTGTTGTCTCTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GCCCTGGAGACCCAGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCACAGCCCTCAGGGCTGTaGACCCTGCCCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ALETQARARHSPDWEDGSQPSGL*TLPSWK
Trigger: TTTCCAGGAGGGCAGGGTCCACAGCCCTGAGGGCTG...TGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp CCCCTGCAGGGCCCAAAGCAAGGCACTAATGAAGGGGGCCCAGGTGTGATGGGGCCTCATCTTGGAGGATaGTTCGGGCCATGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLQGPKQGTNEGGPGVMGPHLGG*FGPCGP
Trigger: AGGGCCGCATGGCCCGAATCATCCTCCAAGATGAGG...CCCCATCACACCTGGGCCCCCTTCATTAGTGCCTTGCTTTGGGCCCTGCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp CCCCTGCAGGGCCCAAAGCAAGGCACTAATGAAGGGGGCCCAGGTGTGATGGGGGCACATCAGGGTCACTaGTCTGGCGCTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLQGPKQGTNEGGPGVMGAHQGH*SGAGQP
Trigger: AGGCTGACCAGCGCCAGATCAGTGACCCTGATGTGC...CCCCATCACACCTGGGCCCCCTTCATTAGTGCCTTGCTTTGGGCCCTGCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GCCCTGGAGACCCAGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCACTGGCACCTGTGCTCTaGGATGCACCAGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: ALETQARARHSPDWEDGSLAPVL*DAPATV
Trigger: AACTGTGGCTGGTGCATCTCAGAGCACAGGTGCCAG...TGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCAGGGTAGGGCCAGCGTaGCCTCTCCACGGTAGCACG +
Preference number: 4 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGRVGPA*PLHGST
Trigger: CGTGCTACCGTGGAGAGGGCACGCTGGCCCTACCCT...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCGGAGGCTATCCGGGCTaGTGGCAGCACGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGGGYPG*WQHGAS
Trigger: GCTTGCTCCGTGCTGCCAGCAGCCCGGATAGCCTCC...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGCCCAGGTGGTGGGCTaGGCACCAGCGATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGIAQVVG*APAIPP
Trigger: TGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCAGCAGGCCCAGGTGGTaGGCTGGGCACCAGCGATTC +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEASRPRW*AGHQRF
Trigger: GAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCT...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGGCCACCATGGTGAGTaGGGCCACAGTACCACGGTC +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGIGHHGE*GHSTTV
Trigger: GACCGTGGTACTGTGGCCTCACTCACCATGGTGGCC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCGGCTATCCGGGCTGCTaGCAGCACGGAGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAGYPGC*QHGASS
Trigger: AGAGCTTGCTCCGTGCTGCCAGCAGCCCGGATAGCC...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACACCTTGGGCCCGAGGCTaGGGGTGCCCAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTPWARG*GCPRKM
Trigger: CATCTTCCTTGGGCACCCTCAGCCTCGGGCCCAAGG...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCTGGACCCTGCCCTCCTaGAAAGAGCACTCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAWTLPS*KEHSCG
Trigger: CCCACACGAGTGCTCTTTCCAGGAGGGCAGGGTCCA...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp ATCTCAGCCCTGGAGACCCAGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGACTGGGGCCCAGGGTaGAGACAGGTGAGATACACA +
Preference number: 4 (lower is better)
Translates to: ISALETQARARHSPDWEDDWGPG*RQVRYT
Trigger: TGTGTATCTCACCTGTCTCCACCCTGGGCCCCAGTC...ATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAGGGCTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCCGGGCTGCCTGCACGTaGTCCAGCAAGAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGRAACT*SSKKPN
Trigger: GTTTGGCTTCTTGCTGGACCACGTGCAGGCAGCCCG...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CCCCTGCAGGGCCCAAAGCAAGGCACTAATGAAGGGGGCCCAGGTGTGATGGGGCCATGTCCTCAGCTTTaGGGCGCTGAGAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: PLQGPKQGTNEGGPGVMGPCPQL*GAESME
Trigger: TTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGG...CCCCATCACACCTGGGCCCCCTTCATTAGTGCCTTGCTTTGGGCCCTGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCACAACCTCACGGGAAGTaGGGCCCAGGTTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: ALKDGHVIGQLRLREFRAQPHGK*GPGSHP
Trigger: TGGGTGAGAACCTGGGCCTCACTTCCCGTGAGGTTG...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCGGCAGGGGTAAGGGCTaGCAACACAGGACATACACG +
Preference number: 4 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGGRGKG*QHRTYT
Trigger: CGTGTATGTCCTGTGTTGGCAGCCCTTACCCCTGCC...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGAGCACCATAACAGGCTaGCGGCCTGTCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQSTITG*RPVWLG
Trigger: CCCAAGCCAGACAGGCCGGCAGCCTGTTATGGTGCT...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCAGGCTCCTGGGCCCCTaGCAGATAGTGCTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIRLLGP*QIVLLA
Trigger: CGCAAGGAGCACTATCTGTCAGGGGCCCAGGAGCCT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGGCAGGGCCACCATGGTaGGTGAGGCCACAGTACCAC +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRAGPPW*VRPQYH
Trigger: GTGGTACTGTGGCCTCACTCACCATGGTGGCCCTGC...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCACAGCCAGCAGTTGCTTaGGCAGCCCAGTGGCATAGT +
Preference number: 4 (lower is better)
Translates to: ALKDGHVIGQLRLREFRAQPAVA*AAQWHS
Trigger: ACTATGCCACTGGGCTGCTCAAGCAACTGCTGGCTG...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCCTGGTAGTGGGCCAATaGGTTGACCCTCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGLVVGQ*VDPLPV
Trigger: GACTGGAAGAGGGTCAACTCATTGGCCCACTACCAG...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCAGGGAGCGGGCTGCCTaGACGTGGTCCAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIRERAA*TWSSKK
Trigger: CTTCTTGCTGGACCACGTGCAGGCAGCCCGCTCCCT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGGCGGGAGCTGCCAGCTaGAGCAGGGATCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTEAGAAS*SRDQVL
Trigger: AAGAACCTGATCCCTGCTGCAGCTGGCAGCTCCCGC...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCCAGGGACCTGGGCACTaGCCTCGCTCTCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTQGPGH*PRSPGT
Trigger: TGTGCCCGGAGAGCGAGGGCAGTGCCCAGGTCCCTG...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGCAAACTTCTGCAACGTaGCCTTGGTGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQQTSAT*PWWPAA
Trigger: GGCTGCTGGCCACCAAGGGCACGTTGCAGAAGTTTG...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCGTTACTTTTGGGAGCTaGGCAGTGAGCCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAVTFGS*AVSPQL
Trigger: CAGCTGAGGGCTCACTGCCCAGCTCCCAAAAGTAAC...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGCATCCAGTTACTTTTaGGAGCTGGGCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGIASSYF*ELGSEP
Trigger: GGGCTCACTGCCCAGCTCCCAAAAGTAACTGGATGC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCACCTTCACAGGGACCTaGGCACTGCCCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRITFTGT*ALPSLS
Trigger: GGAGAGCGAGGGCAGTGCCCAGGTCCCTGTGAAGGT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGCAGGGTGGAGACAGGTaGGATACACACGATTGCCTC +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQQGGDR*DTHDCL
Trigger: GAGGCAATCGTGTGTATCTCACCTGTCTCCACCCTG...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACATCAACACTGTGTAGTTaGGGCGGGAGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTSTLCS*GGSCQL
Trigger: CAGCTGGCAGCTCCCGCCTCAACTACACAGTGTTGA...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGCTGAGCCAAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCGACCAGCACAACAGTaGTGGCCAGCAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RLSQGLQCHKGTRTGNRTRPAQQ*WPAARA
Trigger: GGCTCTTGCTGCTGGCCATCACTGTTGTGCTGGTCG...GGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGGAGTATCCAGCTCCTTaGGCACTGGGTGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTEEYPAP*ALGEPR
Trigger: TCGAGGCTCACCCAGTGCTCAAGGAGCTGGATACTC...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCAGTGGGCCAATGAGTTaGCCCTCTTCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEASGPMS*PSSSHT
Trigger: AGTGTGACTGGAAGAGGGTCAACTCATTGGCCCACT...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTATGGGGCTGCCCTaGACCACAGAGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: ALKDGHVIGQLRLREFRASMGLP*TTETVS
Trigger: TGAAACGGTCTCTGTGGTGCAGGGCAGCCCCATACT...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGCAGGGCTGTGGACCCTaGCCTCCTGGAAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRQGCGP*PPGKST
Trigger: AGTGCTCTTTCCAGGAGGGCAGGGTCCACAGCCCTG...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCTGGCCTGGCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGTCCTTGCCCAGGCGGTaGTCTGATGTAGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: AWPGQSEGSFRCIIQPQMSLPRR*SDVEQE
Trigger: CTCCTGTTCTACATCAGAGCACCGCCTGGGCAAGGA...CATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGCCAGGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGTCCAACAGCGTCTGCTaGGTGTCCAGCTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQSNSVC*VSSCNV
Trigger: AACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGA...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAGACATCCTCGTCGGCTaGCACACCCAGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRDILVG*HTQSLG
Trigger: GCCCAGGCTCTGGGTGTGCCAGCCGACGAGGATGTC...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CAA 72 bp CTGACATGGGAACACCAGGGCAAGAGGGTGGGGATATaGCTGCTGCTAGTGGGGGAAGCTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LTWEHQGKRVGI*LLLVGEAWSCH
Trigger: ATGACAGGACCAAGCTTCCCCCACTAGCAGCAGCAATATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGGCACCCTCCTATGGTaGAGAATAGCAATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGIGTLLW*RIAMGE
Trigger: TTCTCCCATTGCTATTCTTCACCATAGGAGGGTGCC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGCGGTGCACAGCCAGGTaGGTCAGAGTGGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTERCTAR*VRVVSV
Trigger: AACAGATACCACTCTGACTCACCTGGCTGTGCACCG...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGGTCGGTGGTCAGGGCTaGAGAGCAGGTCTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQVGGQG*RAGLEV
Trigger: TACTTCGAGACCTGCTCTTCAGCCCTGACCACCGAC...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGAGTGTCTGGAGCTCCTaGAGGGATGGTGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQSVWSS*RDGEGH
Trigger: ATGTCCTTCACCATCCCTTCAGGAGCTCCAGACACT...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGATCAAGAGGTCCCCTTaGGGCAGGATCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRIKRSP*GRISGQ
Trigger: CTGCCCTGAGATCCTGCCTCAAGGGGACCTCTTGAT...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCAGGTACGAAATGGCCTaGTGCTACCCAGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIRYEMA*CYPGTL
Trigger: GAGGGTGCCTGGGTAGCAGCAGGCCATTTCGTACCT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACAGTATCCAACAGCGTCTaGTGGGTGTCCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTVSNSV*WVSSCN
Trigger: GTTGCAGCTGGACACCCAGCAGACGCTGTTGGATAC...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCTTTGCTCAGCTCTTCTaGAAAGCCATGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAFAQLF*KAMWGR
Trigger: TCTGCCCCACATGGCTTTGCAGAAGAGCTGAGCAAA...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGCGCAGAGTTAGAGGCTaGATGACACCCACAGGAATC +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQRRVRG*MTPTGI
Trigger: GATTCCTGTGGGTGTCATGCAGCCTCTAACTCTGCG...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCGAGGCATTCTGGCACTaGACACTGCTGCTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAEAFWH*TLLLLK
Trigger: CTTTAACAGCAGCAGTGTGCAGTGCCAGAATGCCTC...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGGTTCCTCACCAGGTaGCACAGCTTGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: ANLRAASDASSNPKCCWYWFLTR*HSLVPA
Trigger: GGCAGGTACCAAGCTGTGGCACCTGGTGAGGAACCA...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACCTGAGACCATCTTGCTaGCGCGGTCTCCTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: ANLRAASDASSNPKCCWYLRPSC*RGLLLG
Trigger: ACCGAGAAGGAGACCGCGGCAGCAAGATGGTCTCAG...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGTCCGGACTGAGGCTGTaGCAGGTTCTTAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLSGLRL*QVLSPQ
Trigger: CTGCGGGCTAAGAACCTGCCACAGCCTCAGTCCGGA...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAATAAGAGTAGAACTCTaGGTCCCCTGCACACATGCG +
Preference number: 4 (lower is better)
Translates to: ALKDGHVIGQLRLREFRAIRVEL*VPCTHA
Trigger: CGCATGTGTGCAGGGGACTCAGAGTTCTACTCTTAT...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGCTGAGCCAAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCGTGGATGAATCTGGGTaGTTCGGGGATGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RLSQGLQCHKGTRTGNRTVDESG*FGDGCI
Trigger: GATGCAGCCATCCCCGAATCACCCAGATTCATCCAC...GGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGGGTCCTGTAAGTGGATaGATCTGGGTGATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTEGPVSG*IWVIRG
Trigger: TCCCCGAATCACCCAGATTCATCCACTTACAGGACC...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCTGGCCTGGCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGTGCTGGGTGTCCAGCTaGAACGTTAAGAAGTACACG +
Preference number: 4 (lower is better)
Translates to: AWPGQSEGSFRCIIQPQMCWVSS*NVKKYT
Trigger: CGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCA...CATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGCCAGGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGCAGCCACACTGGCCATaGCATCAGTGCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLQPHWP*HQCCQP
Trigger: TGGCTGACAGCACTGATGGCATGGCCAGTGTGGCTG...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCCTCGAAGTATGGGGCTaGCCTGCACCACAGAGACCG +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTLEVWG*PAPQRP
Trigger: CGGTCTCTGTGGTGCAGGGCAGCCCCATACTTCGAG...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCATGGCTACGGTCAGCTaGACCCCAGAGGATGTCACT +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIMATVS*TPEDVT
Trigger: AGTGACATCCTCTGGGGTGCAGCTGACCGTAGCCAT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCGTTGAGGGAGCGGGCTaGCTGCACGTGGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VTKEPEQETGPRSTKEEVVEGAG*LHVVQQ
Trigger: TTGCTGGACCACGTGCAGGCAGCCCGCTCCCTCAAC...GACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCCTTAAGGATGGGCATGTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGGAAGGCACGGCTGTaGAGCAACTGTCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: ALKDGHVIGQLRLREFRARKARL*SNCPNR
Trigger: TCTATTTGGACAGTTGCTGCACAGCCGTGCCTTCCT...TGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCACATGCCCATCCTTAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACATTTCTGAGACCATCTTaGTGCCGCGGTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTFLRPS*CRGLLL
Trigger: GAGAAGGAGACCGCGGCAGCAAGATGGTCTCAGAAA...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCACAGGCACCAGGCGGTaGGAGCACACACGCATGCTA +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTTGTRR*EHTRML
Trigger: TAGCATGCGTGTGTGCTCCCACCGCCTGGTGCCTGT...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCCCTGGCTTGGCCAGATaGGCACTCTGCACCAAGCGG +
Preference number: 4 (lower is better)
Translates to: VTKEPEQETGPRSTKEEVPGLAR*ALCTKR
Trigger: CCGCTTGGTGCAGAGTGCCCATCTGGCCAAGCCAGG...GACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGGATGGTCTGCCGAGGTaGGTTGGCTCTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQDGLPR*VGSVLL
Trigger: CAGAAGAACAGAGCCAACCCACCTCGGCAGACCATC...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCATTCGGCGCCGGATGTaGGCATTAATGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIIRRRM*ALMLLR
Trigger: CCTCAGCAGCATTAATGCCCACATCCGGCGCCGAAT...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GGTCTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTTCACTGACACATTATTaGGACGGACCCGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: GLTPEISEEGYCPGLAWPSLTHY*DGPAPV
Trigger: TACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGA...AGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATACTTGGGTCCTGTAAGTaGATGAATCTGGGTGATTCG +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGILGSCK*MNLGDS
Trigger: CGAATCACCCAGATTCATCCACTTACAGGACCCAAG...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGTACCACGGTCACGCATaGAGAAACTACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTEYHGHA*RNYSGP
Trigger: AGGCCCAGAGTAGTTTCTCCATGCGTGACCGTGGTA...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAGTACAGCAGGAAGAGTaGCTCCCCGGCGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRVQQEE*LPGALL
Trigger: AAGGAGTGCGCCGGGGAGCCACTCTTCCTGCTGTAC...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGGGGGCGCTGAGAGTATaGAATACCCTTGTACACAGT +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQGALRV*NTLVHS
Trigger: ACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCC...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGGGACCTGTTCAACAATaGCGCCAGCCATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQGPVQQ*RQPWNQ
Trigger: CTGATTCCATGGCTGGCGTCATTGTTGAACAGGTCC...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAACACGAAGGAGGCACTaGCAAAGCCATATATGTAGT +
Preference number: 4 (lower is better)
Translates to: RRARALLTWEHQGKRVGITRRRH*QSHICS
Trigger: ACTACATATATGGCTTTGTCAGTGCCTCCTTCGTGT...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp CTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGTATAGCTGGGCATCCTaGGAGCCATCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: LAVSQRNQNRKQDPDQPKYSWAS*EPSTRT
Trigger: GGTGCGGGTCGATGGCTCTCAGGATGCCCAGCTATA...CTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGGCTGGTACACACATaGCGGTACTTACACCAGTGG +
Preference number: 4 (lower is better)
Translates to: ANLRAASDASSNPKCCWYWLVHT*RYLHQW
Trigger: CCACTGGTGTAAGTACCGTCATGTGTGTACCAGCCA...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGTCAGCTTTGGGGCGCTaGGAGTATGGAATACCCTTG +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRSALGR*EYGIPL
Trigger: CAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGA...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAGGCAAAGGATGGTCTaGCGAGGTGGGTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTRQRMV*RGGLAL
Trigger: CAGAGCCAACCCACCTCGGCAGACCATCCTTTGCCT...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACTCAGCTGGCACCTGTaGTCTGAGATGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRLSWHL*SEMHQP
Trigger: TGGCTGGTGCATCTCAGAGCACAGGTGCCAGCTGAG...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GGTCTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTTACGGGAACTCAAGGTaGGAAAGTACTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GLTPEISEEGYCPGLAWPYGNSR*ESTQTC
Trigger: GCAAGTCTGAGTACTTTCCCACCTTGAGTTCCCGTA...AGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAATAGCAGGCCTGGCTTaGCCAGATGGGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRIAGLA*PDGHSA
Trigger: TGCAGAGTGCCCATCTGGCCAAGCCAGGCCTGCTAT...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGAAGTACGAGGCATTCTaGCACTGCACACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRKYEAF*HCTLLL
Trigger: CAGCAGCAGTGTGCAGTGCCAGAATGCCTCGTACTT...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGCTGAGCCAAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCCTGGTACACCAGACTaGACATATCTCCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLSQGLQCHKGTRTGNRTPGTPD*TYLHCP
Trigger: AGGACAGTGGAGATATGTTCAGTCTGGTGTACCAGG...GGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGGAGTTAGAGGCTGCATaGCACCCACAGGAATCAAGA +
Preference number: 4 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQELEAA*HPQESR
Trigger: TCTTGATTCCTGTGGGTGTCATGCAGCCTCTAACTC...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGCGTACACGGGGTTCTTaGACTGTCAGCAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLRTRGS*TVSRWV
Trigger: AACCCATCTGCTGACAGTTCAAGAACCCCGTGTACG...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGCTGAGCCAAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCCCGGTGGGCTGTACTaGACACAGTTTCAAACAAGT +
Preference number: 4 (lower is better)
Translates to: RLSQGLQCHKGTRTGNRTPGGLY*TQFQTS
Trigger: ACTTGTTTGAAACTGTGTTCAGTACAGCCCACCGGG...GGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCAGAAGCAAGAAGCCGAGACAAACTCATCCTaGTACACCAGACTGAACATA +
Preference number: 4 (lower is better)
Translates to: RLEPDTPLTGRMAQKQEAETNSS*YTRLNI
Trigger: TATGTTCAGTCTGGTGTACCAGGATGAGTTTGTCTC...GGCTTCTTGCTTCTGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGACCCACACTGAGGTCTaGCACGTTGCGCATGGCTAC +
Preference number: 4 (lower is better)
Translates to: LAVSQRNQNRKQDPDQPKTHTEV*HVAHGY
Trigger: GTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGT...CTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGATCACACCAGTCTCCATaGAGAGCAGCTGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRSHQSP*RAAEAA
Trigger: TGCGGCTTCAGCTGCTCTCCATGGAGACTGGTGTGA...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAACCAGAGGGCCCAAGTaGTTCAAAGCTGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRTRGPK*FKAGIR
Trigger: CCTGATCCCAGCTTTGAACCACTTGGGCCCTCTGGT...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGGGCCTCCAAAGTGTaGATAAAGGTGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ANLRAASDASSNPKCCWYWASKV*IKVSRK
Trigger: CTTCCTGCTCACCTTTATCCACACTTTGGAGGCCCA...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGTGTCTGAAGGGATCTTaGTCTGAGAAGAGACAAACT +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQCLKGS*SEKRQT
Trigger: AGTTTGTCTCTTCTCAGATCAAGATCCCTTCAGACA...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGAAGTCTTCGTGACAGTGTGGGTCCCCTaGGCCCAGGCATGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GLSNGLYMAFLKSSEVFVTVWVP*AQACST
Trigger: TGTGCTGCATGCCTGGGCTCAGGGGACCCACACTGT...CACGAAGACTTCTGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACAGGTTTGTCAGTTCATTaGTATCAGTCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTGLSVH*YQSAAQ
Trigger: CTGAGCTGCAGACTGATATCAATGAACTGACAAACC...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGCAAGGTTTTTCTCTATaGGGTCAGCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KTHATEGERTGGLGPLDRQGFSL*GQPAVA
Trigger: AGCAACTGCTGGCTGACCTCATAGAGAAAAACCTTG...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGGTCTGGGCCACCACTaGCAAACAGGCGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSVTKEPEQETGPRSTKEGLGHH*QTGVCD
Trigger: ATCACAGACGCCTGTTTGTCAGTGGTGGCCCAGACC...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCGAAGAATTTCTCGCCTaGTGTATCCAACAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRIEEFLA*CIQQRL
Trigger: CAGACGCTGTTGGATACAGCAGGCGAGAAATTCTTC...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTGCACAGCTCAGATACTaGTCACAGGTCTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSAQLRY*SQVSTG
Trigger: CCCGGTGGAGACCTGTGAGCAGTATCTGAGCTGTGC...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCCTGGTCACTGATGGATaGCATCTTTGCGATATCTCG +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRILVTDG*HLCDIS
Trigger: CGAGATATCGCAAAGATGGCATCCATCAGTGACCAG...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTGTCTCCACCGGGAGTTaGCTCACCTGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSVSTGS*LTCFSL
Trigger: GAGTGAGAAGCAGGTGAGCCAACTCCCGGTGGAGAC...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGAGGATCTCCAAGAAGGGGATCTaGACACCATCCATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: EGSFRCIIQPQMLLVLRISKKGI*TPSMWF
Trigger: AAACCACATGGATGGTGTCCAGATCCCCTTCTTGGA...GATCCTCAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGGCTGAGCCCCGGTaGGCTGTACTGAACACAGTT +
Preference number: 4 (lower is better)
Translates to: LAVSQRNQNRKQDPDQPKKAEPR*AVLNTV
Trigger: AACTGTGTTCAGTACAGCCCACCGGGGCTCAGCCTT...CTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGAATTGGGAATATCCTTaGCATAGAGGAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQNWEYP*HRGACW
Trigger: CCAACAAGCTCCTCTATGCCAAGGATATTCCCAATT...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGAAGTCTTCGTGAGCTCACACCCACACTaGGGTCTGGCACGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GLSNGLYMAFLKSSEVFVSSHPH*GLARCA
Trigger: TGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCT...CACGAAGACTTCTGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACAAGTTTCCATTGATCTaGAGAGGGGTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: ANLRAASDASSNPKCCWYKFPLI*RGVLMQ
Trigger: CTGCATCAACACCCCTCTGCAGATCAATGGAAACTT...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAATCACGGCAGCACCTGTaGTGTAGCACACACCAACCA +
Preference number: 4 (lower is better)
Translates to: CSVTKEPEQETGPRSTKESRQHL*CSTHQP
Trigger: TGGTTGGTGTGTGCTACAGCACAGGTGCTGCCGTGA...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCGTTGCTGGGACTGTGTaGGGAAGTCAGCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTVAGTV*GSQQNN
Trigger: ATTGTTCTGCTGACTTCCGCACACAGTCCCAGCAAC...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGGTGCCCAAGGAAGATaGCAGGGGCCTTACATAGCA +
Preference number: 4 (lower is better)
Translates to: CSVTKEPEQETGPRSTKEGAQGR*QGPYIA
Trigger: TGCTATGTAAGGCCCCTGGCATCTTCCTTGGGCACC...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTCAGCAAAGGCTTCCTTaGACTCCAAGGCCACACGAG +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSQQRLP*TPRPHE
Trigger: CTCGTGTGGCCTTGGAGTGCAAGGAAGCCTTTGCTG...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AGGCTGAGCCAAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCTCATTGATATCAGTCTaGAGCTCAGCAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLSQGLQCHKGTRTGNRTSLISV*SSAKAS
Trigger: GGAAGCCTTTGCTGAGCTGCAGACTGATATCAATGA...GGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTTGGCTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp GTGATAGGGCAGCTGAGGCTGAGAGAGTTCAGGGCAAGTGCCTACAACACTGAGGATGGATGCCATCTTTaGGATATCTCGATAGTACCT +
Preference number: 4 (lower is better)
Translates to: VIGQLRLREFRASAYNTEDGCHL*DISIVP
Trigger: AGGTACTATCGAGATATCGCAAAGATGGCATCCATC...CTCAGTGTTGTAGGCACTTGCCCTGAACTCTCTCAGCCTCAGCTGCCCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGCCAGGTGAGTCAGAGTaGTATCTGTTACCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLPGESE*YLLPQR
Trigger: CCTTTGTGGTAACAGATACCACTCTGACTCACCTGG...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTACGCATGCTAGGAGGTaGGTAGCAGCGAGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSTHARR*VAASIV
Trigger: GACAATGCTCGCTGCTACCCACCTCCTAGCATGCGT...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTTGCTCCTTGCGATGGTaGGGCTCACCCAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSCSLRW*GSPNLK
Trigger: CTTCAAGTTGGGTGAGCCCCACCATCGCAAGGAGCA...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTAGAGCCACAAGGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGGCTGCCGGCCTGTCTaGCTTGGGGAATCACACAGA +
Preference number: 4 (lower is better)
Translates to: LEPQGLSNGLYMAFLKSSGCRPV*LGESHR
Trigger: TCTGTGTGATTCCCCAAGCCAGACAGGCCGGCAGCC...TGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGATGTGAGATATATTTCTaGGACCATCTTGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRCEIYF*DHLAAA
Trigger: CGCGGCAGCAAGATGGTCTCAGAAATATATCTCACA...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACTGGCACCTGTATACATTTaGTCAGCTCTTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QSEGSFRCIIQPQMLLVLAPVYI*SALLQS
Trigger: GCTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGC...CAGTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAGGCTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCTTCTGTCGAAGCTTGTaGTTCCGACAAGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: KACSVTKEPEQETGPRSTFCRSL*FRQEAS
Trigger: AGATGCCTCTTGTCGGAAGCACAAGCTTCGACAGAA...GGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAAAGAGCACTCGTGTaGGTGGCTGGTACACACATG +
Preference number: 4 (lower is better)
Translates to: CSVTKEPEQETGPRSTKEERALV*VAGTHM
Trigger: CATGTGTGTACCAGCCACCCACACGAGTGCTCTTTC...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGTTGAAGTCATTAGCATaGAGGCGGGACTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LAVSQRNQNRKQDPDQPKLKSLA*RRDCST
Trigger: AGTGGAGCAGTCCCGCCTCCATGCTAATGACTTCAA...CTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCGGGTGTAGGTATAGATaGCTCCAGTGTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VTKEPEQETGPRSTKEEVGCRYR*LQCWRC
Trigger: ACATCTCCAACACTGGAGTCATCTATACCTACACCC...GACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTCCCTTCTGGCTTGGGTaGATCCAGTTACTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSPFWLG*IQLLLG
Trigger: TCCCAAAAGTAACTGGATGCACCCAAGCCAGAAGGG...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATTCTGCCGAGGTGGGTTaGCTCTGTTCTTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNSAEVG*LCSSGP
Trigger: AGGGCCAGAAGAACAGAGCCAACCCACCTCGGCAGA...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATTCTGCAGAGGGGTGTTaGTGCAGGGCAGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNSAEGC*CRAAPY
Trigger: ATAAGGAGCTGCCCTGCATCAACACCCCTCTGCAGA...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CTAGAGCCACAAGGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAAGATGCCCTGCCAGATaGTGCCACAAGCTACCAAAC +
Preference number: 4 (lower is better)
Translates to: LEPQGLSNGLYMAFLKSSRCPAR*CHKLPN
Trigger: GTTTGGTAGCTTGTGGCAGCATCTGGCAGGGCATCT...TGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATAGCCAGATGGGCACTCTaGACCAAGCGGTACTCCACA +
Preference number: 4 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIARWAL*TKRYST
Trigger: TGTGGAGTACCGCTTGGTGCAGAGTGCCCATCTGGC...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp GTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCACAAACAGGCGTCTGTaGTGCTATTCTTATGGATGT +
Preference number: 4 (lower is better)
Translates to: VTKEPEQETGPRSTKEEVTNRRL*CYSYGC
Trigger: ACATCCATAAGAATAGCATCACAGACGCCTGTTTGT...GACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp CTAGAGCCACAAGGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGGCACCCTTCTGGCTTaGGTGCATCCAGTTACTTTT +
Preference number: 4 (lower is better)
Translates to: LEPQGLSNGLYMAFLKSSGTLLA*VHPVTF
Trigger: AAAAGTAACTGGATGCACCCAAGCCAGAAGGGTGCC...TGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATACATCGGGCACCCTTCTaGCTTGGGTGCATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIHRAPF*LGCIQL
Trigger: TAACTGGATGCACCCAAGCCAGAAGGGTGCCCGATG...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR TCA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATGGGCTGCATAGTCTATaGGGAGCAGCTTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNGLHSL*GAACSH
Trigger: ATGTGAACAAGCTGCTCCTCATAGACTATGCAGCCC...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR GCA 90 bp CTAGAGCCACAAGGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCATCCTTCAGGAACTTATaGAGCAGGAATGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LEPQGLSNGLYMAFLKSSSFRNL*SRNVNQ
Trigger: CTGGTTCACATTCCTGCTGCATAAGTTCCTGAAGGA...TGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATAGTGATGTCCTCATCTTaGAGGATGATTCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIVMSSS*RMIRAM
Trigger: CATGGCCCGAATCATCCTCCAAGATGAGGACATCAC...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATACATATTCGGTGGGAATaGAGTTGCAACGTACACCAG +
Preference number: 4 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIHIRWE*SCNVHQ
Trigger: CTGGTGTACGTTGCAACTCCATTCCCACCGAATATG...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CCA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATAAGGCAGACACTTGTTTaGGCACCAGTGCTACTAAAG +
Preference number: 4 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIRQTLV*APVLLK
Trigger: CTTTAGTAGCACTGGTGCCCAAACAAGTGTCTGCCT...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
3UTR CAA 72 bp CAGATTTATTCAGTCTTGAAACTAGAGCCACAAGGATaGTCTAATGGACTATACATGGCCTTCCTCAAATCA +
Preference number: 4 (lower is better)
Translates to: QIYSVLKLEPQG*SNGLYMAFLKS
Trigger: TGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAGTTTCAAGACTGAATAAATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 90 bp CCCCTTGAGGCAGGATCTCAGGGCAGCCCTCAGGGCTGTGGACCCTaGCCTCCTGGAAAGAGCACTCGTGTGGGTGGCTGGTACACACAT +
Preference number: 5 (lower is better)
Translates to: PLEAGSQGSPQGCGP*PPGKSTRVGGWYTH
Trigger: ATGTGTGTACCAGCCACCCACACGAGTGCTCTTTCCAGGAGGGCAGGGTCCACAGCCCTGAGGGCTGCCCTGAGATCCTGCCTCAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GTCCACAGGCACCAGGCGGTGGGAGCACACACGCATGCTAGGAGGTaGGTAGCAGCGAGCATTGTCCTCAATGGGCCCTGTGACATGGGC +
Preference number: 5 (lower is better)
Translates to: VHRHQAVGAHTHARR*VAASIVLNGPCDMG
Trigger: GCCCATGTCACAGGGCCCATTGAGGACAATGCTCGCTGCTACCCACCTCCTAGCATGCGTGTGTGCTCCCACCGCCTGGTGCCTGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GCCCTGGAGACCCAGGCTAGAGCCAGACACTCCCCTGACTGGGAGGATGGCTCATCCACGGTAGCACGATaGGATTCGGCGCCGGATGTG +
Preference number: 5 (lower is better)
Translates to: ALETQARARHSPDWEDGSSTVAR*DSAPDV
Trigger: CACATCCGGCGCCGAATCCAATCGTGCTACCGTGGA...TGAGCCATCCTCCCAGTCAGGGGAGTGTCTGGCTCTAGCCTGGGTCTCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp AAGATGGTGAAGAGGACATCCTCGTCGGCTGGCACACCCAGAGCCTaGGCCAATAGCAGGCCTGGCTTGGCCAGATGGGCACTCTGCACC +
Preference number: 5 (lower is better)
Translates to: KMVKRTSSSAGTPRA*ANSRPGLARWALCT
Trigger: GGTGCAGAGTGCCCATCTGGCCAAGCCAGGCCTGCTATTGGCCCAGGCTCTGGGTGTGCCAGCCGACGAGGATGTCCTCTTCACCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GGCTGCATCGGGCACCCTTCTGGCTTGGGTGCATCCAGTTACTTTTaGGAGCTGGGCAGTGAGCCCTCAGCTGGCACCTGTGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GCIGHPSGLGASSYF*ELGSEPSAGTCALR
Trigger: TCTCAGAGCACAGGTGCCAGCTGAGGGCTCACTGCCCAGCTCCCAAAAGTAACTGGATGCACCCAAGCCAGAAGGGTGCCCGATGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGTCTGCCGAGGTGGGTaGGCTCTGTTCTTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RRARALLTWEHQGKRVGIVCRGG*ALFFWP
Trigger: GGGCCAGAAGAACAGAGCCAACCCACCTCGGCAGAC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGTGAAGGAAGAACGGTaGAGGGAGCGGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RRARALLTWEHQGKRVGIVKEER*RERAAC
Trigger: GCAGGCAGCCCGCTCCCTCAACCGTTCTTCCTTCAC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp AGCAAGAAGCCAAACTCGTCAGGGTGCTCGCCTTGGGCCCGAGGCTaGGGGTGCCCAAGGAAGATGCCAGGGGCCTTACATAGCATTGCA +
Preference number: 5 (lower is better)
Translates to: SKKPNSSGCSPWARG*GCPRKMPGALHSIA
Trigger: TGCAATGCTATGTAAGGCCCCTGGCATCTTCCTTGGGCACCCTCAGCCTCGGGCCCAAGGCGAGCACCCTGACGAGTTTGGCTTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp CCTCACTTTCAGTCACCTCCTCAAAGGAACAGCTCACACCCACACTaGGGTCTGGCACGTTGCGCATGGCTACGGTCAGCTGCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PHFQSPPQRNSSHPH*GLARCAWLRSAAPQ
Trigger: CTGGGGTGCAGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTTTGAGGAGGTGACTGAAAGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp GGCAAGGGTGATAGGGCTCTGACTGGGGCCCAGGGTGGAGACAGGTaGGATACACACGATTGCCTCGGCATCTCTCCTCACAAACTGGCA +
Preference number: 5 (lower is better)
Translates to: GKGDRALTGAQGGDR*DTHDCLGISPHKLA
Trigger: TGCCAGTTTGTGAGGAGAGATGCCGAGGCAATCGTGTGTATCTCACCTGTCTCCACCCTGGGCCCCAGTCAGAGCCCTATCACCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp AATCTGGGTGATTCGGGGATGGCTGCATCGGGCACCCTTCTGGCTTaGGTGCATCCAGTTACTTTTGGGAGCTGGGCAGTGAGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: NLGDSGMAASGTLLA*VHPVTFGSWAVSPQ
Trigger: CTGAGGGCTCACTGCCCAGCTCCCAAAAGTAACTGGATGCACCCAAGCCAGAAGGGTGCCCGATGCAGCCATCCCCGAATCACCCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp CTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTGGCAGCAGCTTGTTCACATaGTCCACAGGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LTPEISEEGYCPGLAWPGSSLFT*STGTRR
Trigger: CCGCCTGGTGCCTGTGGACAATGTGAACAAGCTGCT...GCCAGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AGGAGGGCAAGGGCTCTTCTGACATGGGAACACCAGGGCAAGAGGGTGGGGATAGTGCCCACAAACAACTaGCTAGGCCCCTGGACCTGT +
Preference number: 5 (lower is better)
Translates to: RRARALLTWEHQGKRVGIVPTNN*LGPWTC
Trigger: ACAGGTCCAGGGGCCTAGCAAGTTGTTTGTGGGCAC...TATCCCCACCCTCTTGCCCTGGTGTTCCCATGTCAGAAGAGCCCTTGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp TTCAGTCACCTCCTCAAAGGAACAGCTCACACCCACACTGAGGTCTaGCACGTTGCGCATGGCTACGGTCAGCTGCACCCCAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: FSHLLKGTAHTHTEV*HVAHGYGQLHPRGC
Trigger: ACATCCTCTGGGGTGCAGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTTTGAGGAGGTGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp CAGAACAATCCCCTACACAGAGCTCAGCAGGCCCAGGTGGTGGGCTaGGCACCAGCGATTCCTCCATCTCACATACGATCCTTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: QNNPLHRAQQAQVVG*APAIPPSHIRSFQH
Trigger: GTGCTGAAAGGATCGTATGTGAGATGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGGGATTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GTCAGCAGAACAATCCCCTACACAGAGCTCAGCAGGCCCAGGTGGTaGGCTGGGCACCAGCGATTCCTCCATCTCACATACGATCCTTTC +
Preference number: 5 (lower is better)
Translates to: VSRTIPYTELSRPRW*AGHQRFLHLTYDPF
Trigger: GAAAGGATCGTATGTGAGATGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGGGATTGTTCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GAAGTCAGCAGAACAATCCCCTACACAGAGCTCAGCAGGCCCAGGTaGTGGGCTGGGCACCAGCGATTCCTCCATCTCACATACGATCCT +
Preference number: 5 (lower is better)
Translates to: EVSRTIPYTELSRPR*WAGHQRFLHLTYDP
Trigger: AGGATCGTATGTGAGATGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGGGATTGTTCTGCTGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp GGGCTGCCCTGCACCACAGAGACCGTTTCATATAGCTGGGCATCCTaGGAGCCATCGACCCGCACCTTCTTCAAATTACCGCTGCGTGTA +
Preference number: 5 (lower is better)
Translates to: GLPCTTETVSYSWAS*EPSTRTFFKLPLRV
Trigger: TACACGCAGCGGTAATTTGAAGAAGGTGCGGGTCGATGGCTCTCAGGATGCCCAGCTATATGAAACGGTCTCTGTGGTGCAGGGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 90 bp AAACCACAGAATGCTGGTGGTAGGTGTAGGCAGCCACACTGGCCATaGCATCAGTGCTGTCAGCCAGCAAGGGTAGCCCCTCAATCACGT +
Preference number: 5 (lower is better)
Translates to: KPQNAGGRCRQPHWP*HQCCQPARVAPQSR
Trigger: ACGTGATTGAGGGGCTACCCTTGCTGGCTGACAGCACTGATGGCATGGCCAGTGTGGCTGCCTACACCTACCACCAGCATTCTGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GACTTGCCATCAACAGCGGTGCCCACAAACAACTTGCTAGGCCCCTaGACCTGTTCAACAATGACGCCAGCCATGGAATCAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DLPSTAVPTNNLLGP*TCSTMTPAMESGSW
Trigger: CCAGGAGCCTGATTCCATGGCTGGCGTCATTGTTGAACAGGTCCAGGGGCCTAGCAAGTTGTTTGTGGGCACCGCTGTTGATGGCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GATGGGGCATCTTGGCTTGGTAACCTCCCCAACACCACCAGCTCTGGATCTCAGGTCACTGACACATTATaGGGACGGACCCGCACCTGT +
Preference number: 5 (lower is better)
Translates to: DGASWLGNLPNTTSSGSQVTDTL*GRTRTC
Trigger: ACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGAC...CTGAGATCCAGAGCTGGTGGTGTTGGGGAGGTTACCAAGCCAAGATGCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp CACGTTGCGCATGGCTACGGTCAGCTGCACCCCAGAGGATGTCACTaGCACATTATTGGGACGGACCCGCACCTGTATACATTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: HVAHGYGQLHPRGCH*HIIGTDPHLYTFAQ
Trigger: CTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATCCTCTGGGGTGCAGCTGACCGTAGCCATGCGCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp TGTAGAAGACAAAGTCAACCCCAGCAAACCTCACACCAGTCTCCATaGAGAGCAGCTGAAGCCGCACAGTATGAGTGGCCCCATGCCCTC +
Preference number: 5 (lower is better)
Translates to: CRRQSQPQQTSHQSP*RAAEAAQYEWPHAL
Trigger: GAGGGCATGGGGCCACTCATACTGTGCGGCTTCAGCTGCTCTCCATGGAGACTGGTGTGAGGTTTGCTGGGGTTGACTTTGTCTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GGGCCATGCGGCCCTGGCGCCATTCCAAATCCATGTCCTCAGCTTTaGGGCGCTGAGAGTATGGAATACCCTTGTACACAGTATCCAACA +
Preference number: 5 (lower is better)
Translates to: GPCGPGAIPNPCPQL*GAESMEYPCTQYPT
Trigger: TGTTGGATACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTGGAATGGCGCCAGGGCCGCATGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AGGTGGGTAGGATGTCAGAGCAAGGAGGGCAAGGGCTCTTCTGACATGGGAACAATGCACCAGCCACAGTaGAATCGGGGATCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: RWVGCQSKEGKGSSDMGTMHQPQ*NRGSAL
Trigger: CAAGGCTGATCCCCGATTCAACTGTGGCTGGTGCAT...TGTTCCCATGTCAGAAGAGCCCTTGCCCTCCTTGCTCTGACATCCTACCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GGTCTGACTCCTGAGATATCTGAAGAGGGATATTGCCCTGGCCTGGCCTGGCCTAGCTTCTGTCGAAGCTaGTGCTTCCGACAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GLTPEISEEGYCPGLAWPSFCRS*CFRQEA
Trigger: TGCCTCTTGTCGGAAGCACAAGCTTCGACAGAAGCT...AGGCCAGGCCAGGCCAGGGCAATATCCCTCTTCAGATATCTCAGGAGTCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp ACGGCACCTACAAACACCTCCCCAGTCACTCGGTGCACAGCCAGGTaGGTCAGAGTGGTATCTGTTACCACAAAGGTACGAAATGGCCTG +
Preference number: 5 (lower is better)
Translates to: TAPTNTSPVTRCTAR*VRVVSVTTKVRNGL
Trigger: CAGGCCATTTCGTACCTTTGTGGTAACAGATACCACTCTGACTCACCTGGCTGTGCACCGAGTGACTGGGGAGGTGTTTGTAGGTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp AGCCATCGACCCGCACCTTCTTCAAATTACCGCTGCGTGTACCGATaGAAACCACAGAATGCTGGTGGTAGGTGTAGGCAGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: SHRPAPSSNYRCVYR*KPQNAGGRCRQPHW
Trigger: CCAGTGTGGCTGCCTACACCTACCACCAGCATTCTGTGGTTTTCATCGGTACACGCAGCGGTAATTTGAAGAAGGTGCGGGTCGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp CAAACACCTCCCCAGTCACTCGGTGCACAGCCAGGTGAGTCAGAGTaGTATCTGTTACCACAAAGGTACGAAATGGCCTGCTGCTACCCA +
Preference number: 5 (lower is better)
Translates to: QTPPQSLGAQPGESE*YLLPQRYEMACCYP
Trigger: TGGGTAGCAGCAGGCCATTTCGTACCTTTGTGGTAACAGATACCACTCTGACTCACCTGGCTGTGCACCGAGTGACTGGGGAGGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp ATCCAGAGAAATTCCAGAGATGGTAAGCCGAGTGCCTCCAGAAGCTaGGCCCCGAGAGGGACTCACACGGTCAAATGTAGGGGTCACAAA +
Preference number: 5 (lower is better)
Translates to: IQRNSRDGKPSASRS*APRGTHTVKCRGHK
Trigger: TTTGTGACCCCTACATTTGACCGTGTGAGTCCCTCTCGGGGCCCAGCTTCTGGAGGCACTCGGCTTACCATCTCTGGAATTTCTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGATCTGCAGAGGGGTGTaGATGCAGGGCAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQICRGV*MQGSSL
Trigger: TAAGGAGCTGCCCTGCATCAACACCCCTCTGCAGAT...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACAGGAATCAAGAGGTCCCCTaGAGGCAGGATCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KTHATEGERTGGLGPLDRNQEVP*RQDLRA
Trigger: TGCCCTGAGATCCTGCCTCAAGGGGACCTCTTGATT...CCTGTCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp CTAGAGCCACAAGGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGTCAGGGTGCTCGCCTaGGGCCCGAGGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LEPQGLSNGLYMAFLKSSVRVLA*GPRLRV
Trigger: CACCCTCAGCCTCGGGCCCAAGGCGAGCACCCTGAC...TGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCCTTGTGGCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp CGGCCCTGGCGCCATTCCAAATCCATGTCCTCAGCTTTGGGGCGCTaGGAGTATGGAATACCCTTGTACACAGTATCCAACAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RPWRHSKSMSSALGR*EYGIPLYTVSNSLS
Trigger: AGACAAGCTGTTGGATACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTGGAATGGCGCCAGGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 90 bp ATGTCACTGACACATTATTGGGACGGACCCGCACCTGTATACATTTaGTCAGCTCTTCTGCAAAGCCATGTGGGGCAGAGGCACCTGGAC +
Preference number: 5 (lower is better)
Translates to: MSLTHYWDGPAPVYI*SALLQSHVGQRHLD
Trigger: GTCCAGGTGCCTCTGCCCCACATGGCTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp TGGCTACGGTCAGCTGCACCCCAGAGGATGTCACTGACACATTATTaGGACGGACCCGCACCTGTATACATTTGCTCAGCTCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: WLRSAAPQRMSLTHY*DGPAPVYICSALLQ
Trigger: TTGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATCCTCTGGGGTGCAGCTGACCGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp CTTGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGGGTCTCCACCGGGAGTaGGCTCACCTGCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: LAVSQRNQNRKQDPDQPKGLHRE*AHLLLT
Trigger: AGTGAGAAGCAGGTGAGCCAACTCCCGGTGGAGACC...CTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACGTGAGATACACACGATaGCCTCGGCATCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ANLRAASDASSNPKCCWYVRYTR*PRHLSS
Trigger: TGAGGAGAGATGCCGAGGCAATCGTGTGTATCTCAC...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GCCAATCTGAGGGCAGCTTCAGATGCATCATCCAACCCCAAATGCTGCTGGTACATTTCTGAGACCATCTaGCTGCCGCGGTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: ANLRAASDASSNPKCCWYISETI*LPRSPS
Trigger: AGAAGGAGACCGCGGCAGCAAGATGGTCTCAGAAAT...GTACCAGCAGCATTTGGGGTTGGATGATGCATCTGAAGCTGCCCTCAGATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp GCCAGCAAGGGTAGCCCCTCAATCACGTGTAGGCCACCCAATGGTTaGTTCAACACTAACCCACAGAAGTTTCCATTGATCTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ASKGSPSITCRPPNG*FNTNPQKFPLICRG
Trigger: CCCTCTGCAGATCAATGGAAACTTCTGTGGGTTAGTGTTGAATCAACCATTGGGTGGCCTACACGTGATTGAGGGGCTACCCTTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGAATGGAGGTGCTTCCATaGATGATGCTCCAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRMEVLP*MMLQVG
Trigger: GCCCACCTGGAGCATCATCAATGGAAGCACCTCCAT...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp ACAACACTGAGGAAATTTGGCAGTAGGGACGTGAGGAATGTCCCAGAGGCCCAGACAGTATCCAACAGCTaGTCTTTGGCCTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: TTLRKFGSRDVRNVPEAQTVSNS*SLAWVM
Trigger: CATCACCCAGGCCAAAGACAAGCTGTTGGATACTGT...CTGGGCCTCTGGGACATTCCTCACGTCCCTACTGCCAAATTTCCTCAGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp TTAGTGGTCTCAATACCACGGTACTTGGCTCGTACACGGGGTTCTTaGACTGTCAGCAGATGGGTTCCACTCACAGTGATGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: LVVSIPRYLARTRGS*TVSRWVPLTVMEVL
Trigger: AAGCACCTCCATCACTGTGAGTGGAACCCATCTGCTGACAGTTCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGAGACCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp ATAACAGGCTGCCGGCCTGTCTGGCTTGGGGAATCACACAGAAGTTaGGTATCTGAGACAGTTAGTGCACATGGCTGTCCTCCAATCAAC +
Preference number: 5 (lower is better)
Translates to: ITGCRPVWLGESHRS*VSETVSAHGCPPIN
Trigger: GTTGATTGGAGGACAGCCATGTGCACTAACTGTCTCAGATACTCAACTTCTGTGTGATTCCCCAAGCCAGACAGGCCGGCAGCCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp TTGGATGTGAAGAATTTCTCGCCTGCTGTATCCAACAGCGTCTGCTaGGTGTCCAGCTGCAACGTTAAGAAGTACACGAAGGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: LDVKNFSPAVSNSVC*VSSCNVKKYTKEAL
Trigger: CAGTGCCTCCTTCGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGGCGAGAAATTCTTCACATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp GCGCCATTCCAAATCCATGTCCTCAGCTTTGGGGCGCTGAGAGTATaGAATACCCTTGTACACAGTATCCAACAGCTTGTCTTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: APFQIHVLSFGALRV*NTLVHSIQQLVFGL
Trigger: CAGGCCAAAGACAAGCTGTTGGATACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTGGAATGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 90 bp CAGGGATCAGGTTCTTGCCCTTCAATACAACATGTGAACCAGGTTTaGCATCTAGCACACCAGAGGGCCCAAGTGGTTCAAAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: QGSGSCPSIQHVNQV*HLAHQRAQVVQSWD
Trigger: ATCCCAGCTTTGAACCACTTGGGCCCTCTGGTGTGCTAGATGTCAAACCTGGTTCACATGTTGTATTGAAGGGCAAGAACCTGATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 90 bp AATTTCTCGCCTGCTGTATCCAACAGCGTCTGCTGGGTGTCCAGCTaGAACGTTAAGAAGTACACGAAGGAGGCACTGACAAAGCCATAT +
Preference number: 5 (lower is better)
Translates to: NFSPAVSNSVCWVSS*NVKKYTKEALTKPY
Trigger: ATATGGCTTTGTCAGTGCCTCCTTCGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGGCGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 90 bp ATCTTGGATGTGAAGAATTTCTCGCCTGCTGTATCCAACAGCGTCTaGTGGGTGTCCAGCTGCAACGTTAAGAAGTACACGAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: ILDVKNFSPAVSNSV*WVSSCNVKKYTKEA
Trigger: TGCCTCCTTCGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGGCGAGAAATTCTTCACATCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AAGAAAAACTCATGCAACAGAAGGAGAGCGGACTGGGGGTCTGGGACCATTAGACCACAGAAGTTTCCATaGATCTGCAGAGGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: KKNSCNRRRADWGSGTIRPQKFP*ICRGVL
Trigger: CAACACCCCTCTGCAGATCAATGGAAACTTCTGTGG...TCTAATGGTCCCAGACCCCCAGTCCGCTCTCCTTCTGTTGCATGAGTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGAAGTCTTCGTGTTCTGCAACGTGCCCTaGGTGGCCAGCAGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: GLSNGLYMAFLKSSEVFVFCNVP*VASSLV
Trigger: CACAAGGCTGCTGGCCACCAAGGGCACGTTGCAGAA...CACGAAGACTTCTGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATACTGAGGTCTGGCACGTaGCGCATGGCTACGGTCAGC +
Preference number: 5 (lower is better)
Translates to: KEEVCEASNIPWGIYIYILRSGT*RMATVS
Trigger: GCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAG...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 90 bp TATGGAATACCCTTGTACACAGTATCCAACAGCTTGTCTTTGGCCTaGGTGATGCTATCACAGTTAAGAACCTTCACAGGGACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: YGIPLYTVSNSLSLA*VMLSQLRTFTGTWA
Trigger: TGCCCAGGTCCCTGTGAAGGTTCTTAACTGTGATAGCATCACCCAGGCCAAAGACAAGCTGTTGGATACTGTGTACAAGGGTATTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAGAGGTCTTCCAACAGCTTGTCTTaGGCCTGGGTGATGCTATCA +
Preference number: 5 (lower is better)
Translates to: SQRNQNRKQDPDQPKKRSSNSLS*AWVMLS
Trigger: TGATAGCATCACCCAGGCCAAAGACAAGCTGTTGGA...AGACCTCTTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAACGCACCTGTATACATTaGCTCAGCTCTTCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: CSVTKEPEQETGPRSTKERTCIH*LSSSAK
Trigger: CTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGCG...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATTCAGCAAAGGCTTCCTaGCACTCCAAGGCCACACGA +
Preference number: 5 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNSAKAS*HSKATR
Trigger: TCGTGTGGCCTTGGAGTGCAAGGAAGCCTTTGCTGA...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp AAAGAAGAGGTCTGTGAGGCTAGTAACATCCCATGGGGCATATATATTTACATAGGGCACCCTTCTGGCTaGGGTGCATCCAGTTACTTT +
Preference number: 5 (lower is better)
Translates to: KEEVCEASNIPWGIYIYIGHPSG*GASSYF
Trigger: AAAGTAACTGGATGCACCCAAGCCAGAAGGGTGCCC...TATGTAAATATATATGCCCCATGGGATGTTACTAGCCTCACAGACCTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATCACAAAGCTGTAGAGTaGCTGGGACTGTGTGCGGAA +
Preference number: 5 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNHKAVE*LGLCAE
Trigger: TTCCGCACACAGTCCCAGCAACTCTACAGCTTTGTG...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TGCAGTGTCACAAAGGAACCAGAACAGGAAACAGGACCCAGATCAACCAAAGAAAGCTTTGGGTGGTTCTaGCTCTCAAGGTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CSVTKEPEQETGPRSTKESFGWF*LSRFFS
Trigger: AGAGAAAAACCTTGAGAGCAAGAACCACCCAAAGCT...TTCTTTGGTTGATCTGGGTCCTGTTTCCTGTTCTGGTTCCTTTGTGACACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp GGATTGTCTAATGGACTATACATGGCCTTCCTCAAATCATCAGAAGTCTTCGTGCACATGCGCACGATCTaGGATGTGAAGAATTTCTCG +
Preference number: 5 (lower is better)
Translates to: GLSNGLYMAFLKSSEVFVHMRTI*DVKNFS
Trigger: CGAGAAATTCTTCACATCCAAGATCGTGCGCATGTG...CACGAAGACTTCTGATGATTTGAGGAAGGCCATGTATAGTCCATTAGACAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS-3UTR CAA 90 bp TTCCTCAAATCATCAGAAGTCTTCGTGAGTTACATTTTTCCCCTCAGTGGGAATGTTATAGGCAGACACTaGTTTGGGCACCAGTGCTAC +
Preference number: 5 (lower is better)
Translates to: FLKSSEVFVSYIFPLSGNVIGRH*FGHQCY
Trigger: GTAGCACTGGTGCCCAAACAAGTGTCTGCCTATAAC...ATTCCCACTGAGGGGAAAAATGTAACTCACGAAGACTTCTGATGATTTGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp GGCACACCCAGAGCCTGGGCCAATAGCAGGCCTGGCTaGGCCAGATGGGCACTCTGCACCAAGCGGTACTCC +
Preference number: 6 (lower is better)
Translates to: GTPRAWANSRPG*ARWALCTKRYS
Trigger: GGAGTACCGCTTGGTGCAGAGTGCCCATCTGGCCAAGCCAGGCCTGCTATTGGCCCAGGCTCTGGGTGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp CCAAACTCGTCAGGGTGCTCGCCTTGGGCCCGAGGCTaGGGGTGCCCAAGGAAGATGCCAGGGGCCTTACAT +
Preference number: 6 (lower is better)
Translates to: PNSSGCSPWARG*GCPRKMPGALH
Trigger: ATGTAAGGCCCCTGGCATCTTCCTTGGGCACCCTCAGCCTCGGGCCCAAGGCGAGCACCCTGACGAGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp GCCAATAGCAGGCCTGGCTTGGCCAGATGGGCACTCTaGACCAAGCGGTACTCCACACCACGCCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ANSRPGLARWAL*TKRYSTPRQEQ
Trigger: CTGCTCCTGGCGTGGTGTGGAGTACCGCTTGGTGCAGAGTGCCCATCTGGCCAAGCCAGGCCTGCTATTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp GTCCAGCAAGAAGCCAAACTCGTCAGGGTGCTCGCCTaGGGCCCGAGGCTGAGGGTGCCCAAGGAAGATGCC +
Preference number: 6 (lower is better)
Translates to: VQQEAKLVRVLA*GPRLRVPKEDA
Trigger: GGCATCTTCCTTGGGCACCCTCAGCCTCGGGCCCAAGGCGAGCACCCTGACGAGTTTGGCTTCTTGCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp GCAGCTCCTTATTCAGTAGCCAGGGTAGGGCCAGCGTaGCCTCTCCACGGTAGCACGATTGGATTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: AAPYSVARVGPA*PLHGSTIGFGA
Trigger: GGCGCCGAATCCAATCGTGCTACCGTGGAGAGGGCACGCTGGCCCTACCCTGGCTACTGAATAAGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp TCCCCTGAGCCCAGGCATGCAGCACAGCTCAGATACTaGTCACAGGTCTCCACCGGGAGTTGGCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: SPEPRHAAQLRY*SQVSTGSWLTC
Trigger: GCAGGTGAGCCAACTCCCGGTGGAGACCTGTGAGCAGTATCTGAGCTGTGCTGCATGCCTGGGCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp CCCCTACACAGAGCTCAGCAGGCCCAGGTGGTGGGCTaGGCACCAGCGATTCCTCCATCTCACATACGATCC +
Preference number: 6 (lower is better)
Translates to: PLHRAQQAQVVG*APAIPPSHIRS
Trigger: GGATCGTATGTGAGATGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp ACCCGGGTGCCACCCTCCTTGGGTCCTGTAAGTGGATaGATCTGGGTGATTCGGGGATGGCTGCATCGGGCA +
Preference number: 6 (lower is better)
Translates to: TRVPPSLGPVSG*IWVIRGWLHRA
Trigger: TGCCCGATGCAGCCATCCCCGAATCACCCAGATTCATCCACTTACAGGACCCAAGGAGGGTGGCACCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp CTCCTCAAAGGAACAGCTCACACCCACACTGAGGTCTaGCACGTTGCGCATGGCTACGGTCAGCTGCACCCC +
Preference number: 6 (lower is better)
Translates to: LLKGTAHTHTEV*HVAHGYGQLHP
Trigger: GGGGTGCAGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTTTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp AATGCTGGTGGTAGGTGTAGGCAGCCACACTGGCCATaGCATCAGTGCTGTCAGCCAGCAAGGGTAGCCCCT +
Preference number: 6 (lower is better)
Translates to: NAGGRCRQPHWP*HQCCQPARVAP
Trigger: AGGGGCTACCCTTGCTGGCTGACAGCACTGATGGCATGGCCAGTGTGGCTGCCTACACCTACCACCAGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp ATAGCTGGTAAGGTCAGTGCCCGATCAGCAGTGATGTaGAGCGTGCCCAACCAGAACTCCAGGCCACCCACC +
Preference number: 6 (lower is better)
Translates to: IAGKVSARSAVM*SVPNQNSRPPT
Trigger: GGTGGGTGGCCTGGAGTTCTGGTTGGGCACGCTGCACATCACTGCTGATCGGGCACTGACCTTACCAGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp TGGGTGATTCGGGGATGGCTGCATCGGGCACCCTTCTaGCTTGGGTGCATCCAGTTACTTTTGGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: WVIRGWLHRAPF*LGCIQLLLGAG
Trigger: CCCAGCTCCCAAAAGTAACTGGATGCACCCAAGCCAGAAGGGTGCCCGATGCAGCCATCCCCGAATCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp AGAACAATCCCCTACACAGAGCTCAGCAGGCCCAGGTaGTGGGCTGGGCACCAGCGATTCCTCCATCTCACA +
Preference number: 6 (lower is better)
Translates to: RTIPYTELSRPR*WAGHQRFLHLT
Trigger: TGTGAGATGGAGGAATCGCTGGTGCCCAGCCCACCACCTGGGCCTGCTGAGCTCTGTGTAGGGGATTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AAGGAACAGCTCACACCCACACTGAGGTCTGGCACGTaGCGCATGGCTACGGTCAGCTGCACCCCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: KEQLTPTLRSGT*RMATVSCTPED
Trigger: ATCCTCTGGGGTGCAGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp TGGGGCCCAGGGTGGAGACAGGTGAGATACACACGATaGCCTCGGCATCTCTCCTCACAAACTGGCACTCGC +
Preference number: 6 (lower is better)
Translates to: WGPGWRQVRYTR*PRHLSSQTGTR
Trigger: GCGAGTGCCAGTTTGTGAGGAGAGATGCCGAGGCAATCGTGTGTATCTCACCTGTCTCCACCCTGGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp ACCTCCTCAAAGGAACAGCTCACACCCACACTGAGGTCTGGCACGTaGCGCATGGCTACGGTCAGCTGCACCCCAGAGGATGTCACTGAC +
Preference number: 6 (lower is better)
Translates to: TSSKEQLTPTLRSGT*RMATVSCTPEDVTD
Trigger: GTCAGTGACATCCTCTGGGGTGCAGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTTTGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GGCTCTGACTGGGGCCCAGGGTGGAGACAGGTGAGATACACACGATaGCCTCGGCATCTCTCCTCACAAACTGGCACTCGCCATCTCTTA +
Preference number: 6 (lower is better)
Translates to: GSDWGPGWRQVRYTR*PRHLSSQTGTRHLL
Trigger: TAAGAGATGGCGAGTGCCAGTTTGTGAGGAGAGATGCCGAGGCAATCGTGTGTATCTCACCTGTCTCCACCCTGGGCCCCAGTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GTGGGTAGCAGCGAGCATTGTCCTCAATGGGCCCTGTaGCATGGGCCCGTAGCTCAGTTAGGTTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: VGSSEHCPQWAL*HGPVAQLGLEP
Trigger: TGGCTCCAAACCTAACTGAGCTACGGGCCCATGTCACAGGGCCCATTGAGGACAATGCTCGCTGCTACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp CAGTCACCTCCTCAAAGGAACAGCTCACACCCACACTaGGGTCTGGCACGTTGCGCATGGCTACGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: QSPPQRNSSHPH*GLARCAWLRSA
Trigger: AGCTGACCGTAGCCATGCGCAACGTGCCAGACCTCAGTGTGGGTGTGAGCTGTTCCTTTGAGGAGGTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GTGCACATGGCTGTCCTCCAATCAACACTGTGTAGTTaGGGCGGGAGCTGCCAGCTGCAGCAGGGATCAGGT +
Preference number: 6 (lower is better)
Translates to: VHMAVLQSTLCS*GGSCQLQQGSG
Trigger: ACCTGATCCCTGCTGCAGCTGGCAGCTCCCGCCTCAACTACACAGTGTTGATTGGAGGACAGCCATGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp ACGGACCCGCACCTGTATACATTTGCTCAGCTCTTCTaGAAAGCCATGTGGGGCAGAGGCACCTGGACAGGC +
Preference number: 6 (lower is better)
Translates to: TDPHLYTFAQLF*KAMWGRGTWTG
Trigger: GCCTGTCCAGGTGCCTCTGCCCCACATGGCTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp GCTGTGGACCCTGCCCTCCTGGAAAGAGCACTCGTGTaGGTGGCTGGTACACACATGACGGTACTTACACCA +
Preference number: 6 (lower is better)
Translates to: AVDPALLERALV*VAGTHMTVLTP
Trigger: TGGTGTAAGTACCGTCATGTGTGTACCAGCCACCCACACGAGTGCTCTTTCCAGGAGGGCAGGGTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GTGGCCCCATGCCCTCTGGTAAGTGTCTGGAGCTCCTaGAGGGATGGTGAAGGACATCGTAACTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: VAPCPLVSVWSS*RDGEGHRNSPE
Trigger: CTCTGGAGAGTTACGATGTCCTTCACCATCCCTTCAGGAGCTCCAGACACTTACCAGAGGGCATGGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp AGGGTGATGATCTGCTCCAGCTTCTGTCGAAGCTTGTaGTTCCGACAAGAGGCATCTCGGTCCAGCGAGGTG +
Preference number: 6 (lower is better)
Translates to: RVMICSSFCRSL*FRQEASRSSEV
Trigger: CACCTCGCTGGACCGAGATGCCTCTTGTCGGAAGCACAAGCTTCGACAGAAGCTGGAGCAGATCATCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp AATTCCAGAGATGGTAAGCCGAGTGCCTCCAGAAGCTaGGCCCCGAGAGGGACTCACACGGTCAAATGTAGG +
Preference number: 6 (lower is better)
Translates to: NSRDGKPSASRS*APRGTHTVKCR
Trigger: CCTACATTTGACCGTGTGAGTCCCTCTCGGGGCCCAGCTTCTGGAGGCACTCGGCTTACCATCTCTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp GTGATGCTATCACAGTTAAGAACCTTCACAGGGACCTaGGCACTGCCCTCGCTCTCCGGGCACACACAATGC +
Preference number: 6 (lower is better)
Translates to: VMLSQLRTFTGT*ALPSLSGHTQC
Trigger: GCATTGTGTGTGCCCGGAGAGCGAGGGCAGTGCCCAGGTCCCTGTGAAGGTTCTTAACTGTGATAGCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GGCCCTGTGACATGGGCCCGTAGCTCAGTTAGGTTTGGAGCCAGCTaGAAAACTCGATTCACGGCACCTACAAACACCTCCCCAGTCACT +
Preference number: 6 (lower is better)
Translates to: GPVTWARSSVRFGAS*KTRFTAPTNTSPVT
Trigger: AGTGACTGGGGAGGTGTTTGTAGGTGCCGTGAATCGAGTTTTCAAGCTGGCTCCAAACCTAACTGAGCTACGGGCCCATGTCACAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GAAATGGCCTGCTGCTACCCAGGCACCCTCCTATGGTaGAGAATAGCAATGGGAGAAGGCAGACAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: EMACCYPGTLLW*RIAMGEGRQWA
Trigger: TGCCCACTGTCTGCCTTCTCCCATTGCTATTCTTCACCATAGGAGGGTGCCTGGGTAGCAGCAGGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GCTGGCAGCACGGAGCAAGCTCTCGTAGCGACTAAGTaGCCGGGTGAAGGTGAACGAGTTGGCCATGTTATA +
Preference number: 6 (lower is better)
Translates to: AGSTEQALVATK*PGEGERVGHVI
Trigger: TATAACATGGCCAACTCGTTCACCTTCACCCGGTCACTTAGTCGCTACGAGAGCTTGCTCCGTGCTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp CCCCAGTCACTCGGTGCACAGCCAGGTGAGTCAGAGTaGTATCTGTTACCACAAAGGTACGAAATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: PQSLGAQPGESE*YLLPQRYEMAC
Trigger: GCAGGCCATTTCGTACCTTTGTGGTAACAGATACCACTCTGACTCACCTGGCTGTGCACCGAGTGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp GCTGAGGGTGAAAAGGCAAAGGATGGTCTGCCGAGGTaGGTTGGCTCTGTTCTTCTGGCCCTGAGAGAAGAT +
Preference number: 6 (lower is better)
Translates to: AEGEKAKDGLPR*VGSVLLALRED
Trigger: ATCTTCTCTCAGGGCCAGAAGAACAGAGCCAACCCACCTCGGCAGACCATCCTTTGCCTTTTCACCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp GGCCCTGGCGCCATTCCAAATCCATGTCCTCAGCTTTaGGGCGCTGAGAGTATGGAATACCCTTGTACACAG +
Preference number: 6 (lower is better)
Translates to: GPGAIPNPCPQL*GAESMEYPCTQ
Trigger: CTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTGGAATGGCGCCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp TCGTCGATGAGCTTACGGGAACTCAAGGTGGGAAAGTACTCAGACTaGCCATCAACAGCGGTGCCCACAAACAACTTGCTAGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: SSMSLRELKVGKYSD*PSTAVPTNNLLGPW
Trigger: CCAGGGGCCTAGCAAGTTGTTTGTGGGCACCGCTGTTGATGGCAAGTCTGAGTACTTTCCCACCTTGAGTTCCCGTAAGCTCATCGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GCACTGCACACTGCTGCTGTTAAAGCGCACTGCAGGTACCCGATGTaGCCGTCCCTGTACACGGACCACGCATTCATAATTCTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: ALHTAAVKAHCRYPM*PSLYTDHAFIILLS
Trigger: GGACAGAAGAATTATGAATGCGTGGTCCGTGTACAGGGACGGCAACATCGGGTACCTGCAGTGCGCTTTAACAGCAGCAGTGTGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp CCTGCTGTATCCAACAGCGTCTGCTGGGTGTCCAGCTaGAACGTTAAGAAGTACACGAAGGAGGCACTGACA +
Preference number: 6 (lower is better)
Translates to: PAVSNSVCWVSS*NVKKYTKEALT
Trigger: TGTCAGTGCCTCCTTCGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp TCAACAGCGGTGCCCACAAACAACTTGCTAGGCCCCTaGACCTGTTCAACAATGACGCCAGCCATGGAATCA +
Preference number: 6 (lower is better)
Translates to: STAVPTNNLLGP*TCSTMTPAMES
Trigger: TGATTCCATGGCTGGCGTCATTGTTGAACAGGTCCAGGGGCCTAGCAAGTTGTTTGTGGGCACCGCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp TCAGACTTGCCATCAACAGCGGTGCCCACAAACAACTaGCTAGGCCCCTGGACCTGTTCAACAATGACGCCA +
Preference number: 6 (lower is better)
Translates to: SDLPSTAVPTNN*LGPWTCSTMTP
Trigger: TGGCGTCATTGTTGAACAGGTCCAGGGGCCTAGCAAGTTGTTTGTGGGCACCGCTGTTGATGGCAAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp GTCAGCTGCACCCCAGAGGATGTCACTGACACATTATaGGGACGGACCCGCACCTGTATACATTTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: VSCTPEDVTDTL*GRTRTCIHLLS
Trigger: GCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATCCTCTGGGGTGCAGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AGGCGGGAGCTGCCAGCTGCAGCAGGGATCAGGTTCTaGCCCTTCAATACAACATGTGAACCAGGTTTGACA +
Preference number: 6 (lower is better)
Translates to: RRELPAAAGIRF*PFNTTCEPGLT
Trigger: TGTCAAACCTGGTTCACATGTTGTATTGAAGGGCAAGAACCTGATCCCTGCTGCAGCTGGCAGCTCCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GATGTCACTGACACATTATTGGGACGGACCCGCACCTGTATACATTaGCTCAGCTCTTCTGCAAAGCCATGTGGGGCAGAGGCACCTGGA +
Preference number: 6 (lower is better)
Translates to: DVTDTLLGRTRTCIH*LSSSAKPCGAEAPG
Trigger: TCCAGGTGCCTCTGCCCCACATGGCTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp ATGGCTACGGTCAGCTGCACCCCAGAGGATGTCACTGACACATTATaGGGACGGACCCGCACCTGTATACATTTGCTCAGCTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: MATVSCTPEDVTDTL*GRTRTCIHLLSSSA
Trigger: TGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATCCTCTGGGGTGCAGCTGACCGTAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp ACAAACACCTCCCCAGTCACTCGGTGCACAGCCAGGTaGGTCAGAGTGGTATCTGTTACCACAAAGGTACGA +
Preference number: 6 (lower is better)
Translates to: TNTSPVTRCTAR*VRVVSVTTKVR
Trigger: TCGTACCTTTGTGGTAACAGATACCACTCTGACTCACCTGGCTGTGCACCGAGTGACTGGGGAGGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp CCCGCACCTTCTTCAAATTACCGCTGCGTGTACCGATaGAAACCACAGAATGCTGGTGGTAGGTGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: PAPSSNYRCVYR*KPQNAGGRCRQ
Trigger: CTGCCTACACCTACCACCAGCATTCTGTGGTTTTCATCGGTACACGCAGCGGTAATTTGAAGAAGGTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp TGCCGGCCTGTCTGGCTTGGGGAATCACACAGAAGTTaGGTATCTGAGACAGTTAGTGCACATGGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: CRPVWLGESHRS*VSETVSAHGCP
Trigger: AGGACAGCCATGTGCACTAACTGTCTCAGATACTCAACTTCTGTGTGATTCCCCAAGCCAGACAGGCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp ACACATTATTGGGACGGACCCGCACCTGTATACATTTaGTCAGCTCTTCTGCAAAGCCATGTGGGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: THYWDGPAPVYI*SALLQSHVGQR
Trigger: CCTCTGCCCCACATGGCTTTGCAGAAGAGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp TCAGCTGCACCCCAGAGGATGTCACTGACACATTATTaGGACGGACCCGCACCTGTATACATTTGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SAAPQRMSLTHY*DGPAPVYICSA
Trigger: AGCTGAGCAAATGTATACAGGTGCGGGTCCGTCCCAATAATGTGTCAGTGACATCCTCTGGGGTGCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp ACATGGGCCCGTAGCTCAGTTAGGTTTGGAGCCAGCTaGAAAACTCGATTCACGGCACCTACAAACACCTCC +
Preference number: 6 (lower is better)
Translates to: TWARSSVRFGAS*KTRFTAPTNTS
Trigger: GGAGGTGTTTGTAGGTGCCGTGAATCGAGTTTTCAAGCTGGCTCCAAACCTAACTGAGCTACGGGCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp ACTGCTGCTGTTAAAGCGCACTGCAGGTACCCGATGTaGCCGTCCCTGTACACGGACCACGCATTCATAATT +
Preference number: 6 (lower is better)
Translates to: TAAVKAHCRYPM*PSLYTDHAFII
Trigger: AATTATGAATGCGTGGTCCGTGTACAGGGACGGCAACATCGGGTACCTGCAGTGCGCTTTAACAGCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GTTAGTGGTCTCAATACCACGGTACTTGGCTCGTACACGGGGTTCTaGAACTGTCAGCAGATGGGTTCCACTCACAGTGATGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: VSGLNTTVLGSYTGF*NCQQMGSTHSDGGA
Trigger: AGCACCTCCATCACTGTGAGTGGAACCCATCTGCTGACAGTTCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGAGACCACTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp TCAGCCACCGACTCTGTCCTGCGCAATAGCAGCTTTGGGTGGTTCTaGCTCTCAAGGTTTTTCTCTATGAGGTCAGCCAGCAGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SATDSVLRNSSFGWF*LSRFFSMRSASSCL
Trigger: CAAGCAACTGCTGGCTGACCTCATAGAGAAAAACCTTGAGAGCAAGAACCACCCAAAGCTGCTATTGCGCAGGACAGAGTCGGTGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp TGCCCAAGGAAGATGCCAGGGGCCTTACATAGCATTGCAGTGTCGTaGATCACCTGGCATGTGTTAGTGGTCTCAATACCACGGTACTTG +
Preference number: 6 (lower is better)
Translates to: CPRKMPGALHSIAVS*ITWHVLVVSIPRYL
Trigger: CAAGTACCGTGGTATTGAGACCACTAACACATGCCAGGTGATCAACGACACTGCAATGCTATGTAAGGCCCCTGGCATCTTCCTTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 90 bp GCAGGGATCAGGTTCTTGCCCTTCAATACAACATGTGAACCAGGTTaGACATCTAGCACACCAGAGGGCCCAAGTGGTTCAAAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: AGIRFLPFNTTCEPG*TSSTPEGPSGSKLG
Trigger: TCCCAGCTTTGAACCACTTGGGCCCTCTGGTGTGCTAGATGTCAAACCTGGTTCACATGTTGTATTGAAGGGCAAGAACCTGATCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp TCAATACCACGGTACTTGGCTCGTACACGGGGTTCTTaGACTGTCAGCAGATGGGTTCCACTCACAGTGATG +
Preference number: 6 (lower is better)
Translates to: SIPRYLARTRGS*TVSRWVPLTVM
Trigger: CATCACTGTGAGTGGAACCCATCTGCTGACAGTTCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp GTGAAGAATTTCTCGCCTGCTGTATCCAACAGCGTCTaGTGGGTGTCCAGCTGCAACGTTAAGAAGTACACG +
Preference number: 6 (lower is better)
Translates to: VKNFSPAVSNSV*WVSSCNVKKYT
Trigger: CGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGGCGAGAAATTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp AGTCAGAGTGGTATCTGTTACCACAAAGGTACGAAATaGCCTGCTGCTACCCAGGCACCCTCCTATGGTGAA +
Preference number: 6 (lower is better)
Translates to: SQSGICYHKGTK*PAATQAPSYGE
Trigger: TTCACCATAGGAGGGTGCCTGGGTAGCAGCAGGCCATTTCGTACCTTTGTGGTAACAGATACCACTCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AACCCACAGAAGTTTCCATTGATCTGCAGAGGGGTGTaGATGCAGGGCAGCTCCTTATTCAGTAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: NPQKFPLICRGV*MQGSSLFSSQG
Trigger: ACCCTGGCTACTGAATAAGGAGCTGCCCTGCATCAACACCCCTCTGCAGATCAATGGAAACTTCTGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp CTCAATACCACGGTACTTGGCTCGTACACGGGGTTCTaGAACTGTCAGCAGATGGGTTCCACTCACAGTGAT +
Preference number: 6 (lower is better)
Translates to: LNTTVLGSYTGF*NCQQMGSTHSD
Trigger: ATCACTGTGAGTGGAACCCATCTGCTGACAGTTCAAGAACCCCGTGTACGAGCCAAGTACCGTGGTATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp CGCCATTCCAAATCCATGTCCTCAGCTTTGGGGCGCTaGGAGTATGGAATACCCTTGTACACAGTATCCAAC +
Preference number: 6 (lower is better)
Translates to: RHSKSMSSALGR*EYGIPLYTVSN
Trigger: GTTGGATACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTGGAATGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp AAGAATTTCTCGCCTGCTGTATCCAACAGCGTCTGCTaGGTGTCCAGCTGCAACGTTAAGAAGTACACGAAG +
Preference number: 6 (lower is better)
Translates to: KNFSPAVSNSVC*VSSCNVKKYTK
Trigger: CTTCGTGTACTTCTTAACGTTGCAGCTGGACACCCAGCAGACGCTGTTGGATACAGCAGGCGAGAAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp GGGGCCTTACATAGCATTGCAGTGTCGTTGATCACCTaGCATGTGTTAGTGGTCTCAATACCACGGTACTTG +
Preference number: 6 (lower is better)
Translates to: GALHSIAVSLIT*HVLVVSIPRYL
Trigger: CAAGTACCGTGGTATTGAGACCACTAACACATGCCAGGTGATCAACGACACTGCAATGCTATGTAAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AGCTTACGGGAACTCAAGGTGGGAAAGTACTCAGACTaGCCATCAACAGCGGTGCCCACAAACAACTTGCTA +
Preference number: 6 (lower is better)
Translates to: SLRELKVGKYSD*PSTAVPTNNLL
Trigger: TAGCAAGTTGTTTGTGGGCACCGCTGTTGATGGCAAGTCTGAGTACTTTCCCACCTTGAGTTCCCGTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GGTAGCCCCTCAATCACGTGTAGGCCACCCAATGGTTaGTTCAACACTAACCCACAGAAGTTTCCATTGATC +
Preference number: 6 (lower is better)
Translates to: GSPSITCRPPNG*FNTNPQKFPLI
Trigger: GATCAATGGAAACTTCTGTGGGTTAGTGTTGAATCAACCATTGGGTGGCCTACACGTGATTGAGGGGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS TCA 72 bp GGTTCTTGCCCTTCAATACAACATGTGAACCAGGTTTaGCATCTAGCACACCAGAGGGCCCAAGTGGTTCAA +
Preference number: 6 (lower is better)
Translates to: GSCPSIQHVNQV*HLAHQRAQVVQ
Trigger: TTGAACCACTTGGGCCCTCTGGTGTGCTAGATGTCAAACCTGGTTCACATGTTGTATTGAAGGGCAAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS GCA 72 bp CTGAACACAGTTTCAAACAAGTCATCTACAAACTTCTaGAACGTGCCCTTGGTGGCCAGCAGCCTTGTGAGA +
Preference number: 6 (lower is better)
Translates to: LNTVSNKSSTNF*NVPLVASSLVR
Trigger: TCTCACAAGGCTGCTGGCCACCAAGGGCACGTTGCAGAAGTTTGTAGATGACTTGTTTGAAACTGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp CCCTTGTACACAGTATCCAACAGCTTGTCTTTGGCCTaGGTGATGCTATCACAGTTAAGAACCTTCACAGGG +
Preference number: 6 (lower is better)
Translates to: PLYTVSNSLSLA*VMLSQLRTFTG
Trigger: CCCTGTGAAGGTTCTTAACTGTGATAGCATCACCCAGGCCAAAGACAAGCTGTTGGATACTGTGTACAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CCA 72 bp CAAATCCATGTCCTCAGCTTTGGGGCGCTGAGAGTATaGAATACCCTTGTACACAGTATCCAACAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: QIHVLSFGALRV*NTLVHSIQQLV
Trigger: GACAAGCTGTTGGATACTGTGTACAAGGGTATTCCATACTCTCAGCGCCCCAAAGCTGAGGACATGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AAGATGCCAGGGGCCTTACATAGCATTGCAGTGTCGTaGATCACCTGGCATGTGTTAGTGGTCTCAATACCA +
Preference number: 6 (lower is better)
Translates to: KMPGALHSIAVS*ITWHVLVVSIP
Trigger: TGGTATTGAGACCACTAACACATGCCAGGTGATCAACGACACTGCAATGCTATGTAAGGCCCCTGGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4
CDS CAA 72 bp AGGTTCTTGCCCTTCAATACAACATGTGAACCAGGTTaGACATCTAGCACACCAGAGGGCCCAAGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: RFLPFNTTCEPG*TSSTPEGPSGS
Trigger: TGAACCACTTGGGCCCTCTGGTGTGCTAGATGTCAAACCTGGTTCACATGTTGTATTGAAGGGCAAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004326.4