RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030084

Ensembl transcript IDs: ENSMUST00000049845.6, ENSMUST00000163139.8, ENSMUST00000205121.2

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGGCGAGGGCCAGGACCCAACCACAGCCCCCACACCTGGACTTaGTACAGGTGGGCCAAGGGCTGTCTCCTGGGTCCTCTGCTGCCC +
Preference number: 1 (lower is better)
Translates to: GRRGPGPNHSPHTWT*YRWAKGCLLGPLLP
Trigger: GGGCAGCAGAGGACCCAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCCCTCGCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp GGAGGCCAGGCACCCAGGCCCAGCTTGGAATGGCCCAGGCACTCCTaGGTCCAGGTGCAAAGGGAAAGACCAGGCAGGAAGGGGGATGGG +
Preference number: 1 (lower is better)
Translates to: GGQAPRPSLEWPRHS*VQVQRERPGRKGDG
Trigger: CCCATCCCCCTTCCTGCCTGGTCTTTCCCTTTGCACCTGGACTCAGGAGTGCCTGGGCCATTCCAAGCTGGGCCTGGGTGCCTGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp GAGTGGGGCCTCTCTCCCCAGCAGAAGGATGTGGCACTCCAGCCTTaGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCAC +
Preference number: 1 (lower is better)
Translates to: EWGLSPQQKDVALQP*PRRARGESEGGGKH
Trigger: GTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAGGCTGGAGTGCCACATCCTTCTGCTGGGGAGAGAGGCCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 90 bp CACCCAGGCCCAGCTTGGAATGGCCCAGGCACTCCTGAGTCCAGGTaGAAAGGGAAAGACCAGGCAGGAAGGGGGATGGGGCCCATGGCA +
Preference number: 1 (lower is better)
Translates to: HPGPAWNGPGTPESR*KGKDQAGRGMGPMA
Trigger: TGCCATGGGCCCCATCCCCCTTCCTGCCTGGTCTTTCCCTTTGCACCTGGACTCAGGAGTGCCTGGGCCATTCCAAGCTGGGCCTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp ATAAGAGAGTGGGGCAGCTGGAGAGCAGAGCCAGCCCAAGGCATGTaGAGGCCAGGCACCCAGGCCCAGCTTGGAATGGCCCAGGCACTC +
Preference number: 1 (lower is better)
Translates to: IREWGSWRAEPAQGM*RPGTQAQLGMAQAL
Trigger: GAGTGCCTGGGCCATTCCAAGCTGGGCCTGGGTGCCTGGCCTCCACATGCCTTGGGCTGGCTCTGCTCTCCAGCTGCCCCACTCTCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTaGGACGGTGGCCTGTTATCCTCCAGAGCTCCGTGGTGGGCTGCG +
Preference number: 1 (lower is better)
Translates to: LEATGNIRGGEDKGW*DGGLLSSRAPWWAA
Trigger: CGCAGCCCACCACGGAGCTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CCAGGTGCAAAGGGAAAGACCAGGCAGGAAGGGGGATGGGGCCCATaGCAGGACGGCAGTACCAAGAGTGTTAGGGCCAGGCTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: PGAKGKTRQEGGWGP*QDGSTKSVRARLAG
Trigger: TCCAGCCAGCCTGGCCCTAACACTCTTGGTACTGCCGTCCTGCCATGGGCCCCATCCCCCTTCCTGCCTGGTCTTTCCCTTTGCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CTCCTGAGTCCAGGTGCAAAGGGAAAGACCAGGCAGGAAGGGGGATaGGGCCCATGGCAGGACGGCAGTACCAAGAGTGTTAGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LLSPGAKGKTRQEGG*GPWQDGSTKSVRAR
Trigger: CCTGGCCCTAACACTCTTGGTACTGCCGTCCTGCCATGGGCCCCATCCCCCTTCCTGCCTGGTCTTTCCCTTTGCACCTGGACTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CCTGCTGCTCTGTCTAGCTGTCCAACCATAAGAGAGTGGGGCAGCTaGAGAGCAGAGCCAGCCCAAGGCATGTGGAGGCCAGGCACCCAG +
Preference number: 1 (lower is better)
Translates to: PAALSSCPTIREWGS*RAEPAQGMWRPGTQ
Trigger: CTGGGTGCCTGGCCTCCACATGCCTTGGGCTGGCTCTGCTCTCCAGCTGCCCCACTCTCTTATGGTTGGACAGCTAGACAGAGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp GCCCTCACCCCTGCTGCTCTGTCTAGCTGTCCAACCATAAGAGAGTaGGGCAGCTGGAGAGCAGAGCCAGCCCAAGGCATGTGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: ALTPAALSSCPTIRE*GSWRAEPAQGMWRP
Trigger: TGGCCTCCACATGCCTTGGGCTGGCTCTGCTCTCCAGCTGCCCCACTCTCTTATGGTTGGACAGCTAGACAGAGCAGCAGGGGTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp CTCCTACCTGACACCCACATGGGCAAGGTGGCCTGTAGGACAAAGTaGGGCTGGCCTATTCTGAGGGAGCCTGGGGACGTGGGGCTGGAT +
Preference number: 1 (lower is better)
Translates to: LLPDTHMGKVACRTK*GWPILREPGDVGLD
Trigger: ATCCAGCCCCACGTCCCCAGGCTCCCTCAGAATAGGCCAGCCTCACTTTGTCCTACAGGCCACCTTGCCCATGTGGGTGTCAGGTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 90 bp CGGCTCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTaGATGGCAGGGAGAGGAAGGCGAGGGCCAGGACCCAACCACAGC +
Preference number: 1 (lower is better)
Translates to: RLSRNPYIHSDKNWP*MAGRGRRGPGPNHS
Trigger: GCTGTGGTTGGGTCCTGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATaGCAGGGAGAGGAAGGCGAGGGCCAGGACCCAACCACAGCCCCC +
Preference number: 1 (lower is better)
Translates to: SAGTLTSTAIRIGPA*QGEEGEGQDPTTAP
Trigger: GGGGGCTGTGGTTGGGTCCTGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CAGAGGCGGCTCAGCAGGAACCCTTACATCCACAGCGATAAGAATTaGCCCTGCATGGCAGGGAGAGGAAGGCGAGGGCCAGGACCCAAC +
Preference number: 1 (lower is better)
Translates to: QRRLSRNPYIHSDKN*PCMAGRGRRGPGPN
Trigger: GTTGGGTCCTGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATaGTGGGACGGTGGCCTGTTATCCTCCAGAGCTCCGTGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: RLEATGNIRGGEDKG*WDGGLLSSRAPWWA
Trigger: AGCCCACCACGGAGCTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 90 bp GGGTGGCAGTCGGACCCCTCTGAACCAACAGAGGTTGCTGGCCTGTaGCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: GWQSDPSEPTEVAGL*LDSMQCLLGTHQGP
Trigger: AGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAACCTCTGTTGGTTCAGAGGGGTCCGACTGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp ACAGAGAAGGGTTCGCCTAGCCATTGTCCACATGTCACTTGGAAGTaGGGTCTGCAGGCCCTCCATAGGAGGGGAGTGGGGCCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: TEKGSPSHCPHVTWK*GLQALHRRGVGPLS
Trigger: GGAGAGAGGCCCCACTCCCCTCCTATGGAGGGCCTGCAGACCCCACTTCCAAGTGACATGTGGACAATGGCTAGGCGAACCCTTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp GGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACATCAGATaGCAGCTCCAGGGCCCTTGGTTTTGCTCTCTTCCACCTGGGTTC +
Preference number: 1 (lower is better)
Translates to: GQRLLPSGGSRGHIR*QLQGPWFCSLPPGF
Trigger: GAACCCAGGTGGAAGAGAGCAAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp GGCTCCCTAGCTTGGAGTGTGAGGGACCACAAGACTAGCAGCCCATaGATGTGGGGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: GSLAWSVRDHKTSSP*MWGVLSPALIMVLA
Trigger: GGCCAGGACCATTATCAGTGCTGGGGACAGCACACCCCACATCCATGGGCTGCTAGTCTTGTGGTCCCTCACACTCCAAGCTAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp GGCAGTCGGACCCCTCTGAACCAACAGAGGTTGCTGGCCTGTGCCTaGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACC +
Preference number: 1 (lower is better)
Translates to: GSRTPLNQQRLLACA*TQCSVSWGHIKALT
Trigger: GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAACCTCTGTTGGTTCAGAGGGGTCCGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 90 bp ATGGTGGGACGGTGGCCTGTTATCCTCCAGAGCTCCGTGGTGGGCTaGGATAGGAGCAGGAGGCGGGGAATAAATAACGGGAACATGCAC +
Preference number: 1 (lower is better)
Translates to: MVGRWPVILQSSVVG*DRSRRRGINNGNMH
Trigger: GTGCATGTTCCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCAGCCCACCACGGAGCTCTGGAGGATAACAGGCCACCGTCCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 90 bp CCCCTCAGAGGCCACCTCTCTCTCAGGAAAACCACTAGCAGCTCTTaGCAAGCAGCAAATATCCCTGGGCAGAACCAGCCACGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: PLRGHLSLRKTTSSS*QAANIPGQNQPRCA
Trigger: AGCACAGCGTGGCTGGTTCTGCCCAGGGATATTTGCTGCTTGGCAAGAGCTGCTAGTGGTTTTCCTGAGAGAGAGGTGGCCTCTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CCAGGCTCTGACCCTAGTATCAGCCCAGGGAATGAGCCAAAGAGTTaGGGTGGGAGTCTGACCAGAATTCATGGCCCAGGGTGTCTAGGC +
Preference number: 1 (lower is better)
Translates to: PGSDPSISPGNEPKS*GGSLTRIHGPGCLG
Trigger: GCCTAGACACCCTGGGCCATGAATTCTGGTCAGACTCCCACCCCAACTCTTTGGCTCATTCCCTGGGCTGATACTAGGGTCAGAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp CTGTGCGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTaGAGCCTACAACCAGGGAAGACTTTAGGGGAAACTGAGGCTCCC +
Preference number: 1 (lower is better)
Translates to: LCVFQAELEELGASI*SLQPGKTLGETEAP
Trigger: GGGAGCCTCAGTTTCCCCTAAAGTCTTCCCTGGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp CTAGCTTGGAGTGTGAGGGACCACAAGACTAGCAGCCCATGGATGTaGGGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTT +
Preference number: 1 (lower is better)
Translates to: LAWSVRDHKTSSPWM*GVLSPALIMVLATV
Trigger: AACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACCCCACATCCATGGGCTGCTAGTCTTGTGGTCCCTCACACTCCAAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp AAGGACAAGCAGATGTCAGAGCCCAGTCCAGAAGTAGCAGGGAAATaGGGCCTGGCCCTGATGGCTGTGCCGAGAAGATGCGTGGTAAGA +
Preference number: 1 (lower is better)
Translates to: KDKQMSEPSPEVAGK*GLALMAVPRRCVVR
Trigger: TCTTACCACGCATCTTCTCGGCACAGCCATCAGGGCCAGGCCTCATTTCCCTGCTACTTCTGGACTGGGCTCTGACATCTGCTTGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 90 bp AGTGAAGGCATTGAGCCTAGAAGCTGTGCGTGTTCCAGGCAGAGCTaGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCAGGGAAGA +
Preference number: 1 (lower is better)
Translates to: SEGIEPRSCACSRQS*KNWGLPSEAYNQGR
Trigger: TCTTCCCTGGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACGCACAGCTTCTAGGCTCAATGCCTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp AGCTCCAGGGCCCTTGGTTTTGCTCTCTTCCACCTGGGTTCCTCCTaGATTGCCTTTCCGTGTCTCTTCCCTCAAATAATTGTACAGCAC +
Preference number: 1 (lower is better)
Translates to: SSRALGFALFHLGSS*IAFPCLFPQIIVQH
Trigger: GTGCTGTACAATTATTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAGCAAAACCAAGGGCCCTGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 90 bp TTTCTCTCTCTAAATATATCTACTCTAGCTTGTGTAGCACCGATGTaGGCCACCAGATCCAACTGGGGAAACTGGAGTAGAGGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: FLSLNISTLACVAPM*ATRSNWGNWSRGWQ
Trigger: CTGCCACCCTCTACTCCAGTTTCCCCAGTTGGATCTGGTGGCTCACATCGGTGCTACACAAGCTAGAGTAGATATATTTAGAGAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 90 bp AGGAAGGCGAGGGCCAGGACCCAACCACAGCCCCCACACCTGGACTaGGTACAGGTGGGCCAAGGGCTGTCTCCTGGGTCCTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RKARARTQPQPPHLD*VQVGQGLSPGSSAA
Trigger: GGCAGCAGAGGACCCAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCCCTCGCCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACTCCTGGGTCCTCTGCTaGCCTCCTGCTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHSWVLC*PPALPP
Trigger: AGGAGGCAGAGCAGGAGGGCAGCAGAGGACCCAGGA...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 90 bp AAGCAGCAAATATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTaGCCCCACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: KQQISLGRTSHAVLS*PHGSKPQAQRRLSR
Trigger: CCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGATATTTGCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp TCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCAGAGGCTGCCCTCCTGCTCTaGCTCCTGCTGGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SGEGRIKDGGTVACYPPEAALLL*LLLGGH
Trigger: GTGCCCACCCAGCAGGAGGCAGAGCAGGAGGGCAGC...CTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR TCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACGAGGCTGGCCTATTCTaGGGGAGCCTGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHEAGLF*GSLGTW
Trigger: CCACGTCCCCAGGCTCCCTCAGAATAGGCCAGCCTC...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCTCCAGCCCCTTGTCCTaGTGCCCTCCTTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTSSPLS*CPPSGG
Trigger: CCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGA...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp TCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCAGAGTCCATAGGAGGGGAGTaGGGCCTCTCTCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SGEGRIKDGGTVACYPPESIGGE*GLSPQQ
Trigger: CTGCTGGGGAGAGAGGCCCCACTCCCCTCCTATGGA...CTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCTTGGAAGTGGGGTCTaGAGGCCCTCCATAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHLGSGV*RPSIGG
Trigger: CCCTCCTATGGAGGGCCTGCAGACCCCACTTCCAAG...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 90 bp ACTGGAGTAGAGGGTGGCAGTCGGACCCCTCTGAACCAACAGAGGTaGCTGGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: TGVEGGSRTPLNQQR*LACAWTQCSVSWGH
Trigger: GTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAACCTCTGTTGGTTCAGAGGGGTCCGACTGCCACCCTCTACTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR TCA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCAGAAGCCAAGAAATGTaGATTGGTCCAGCCCCTTGT +
Preference number: 2 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCRSQEM*IGPAPC
Trigger: ACAAGGGGCTGGACCAATTCACATTTCTTGGCTTCT...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 90 bp AGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAATGTGAATaGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RLCLLVAAEEAKKCE*VQPLVLLPSFWRAW
Trigger: CCAGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR TCA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCAGAGGAGTTGCTCCCTaGGTCCTTGTACCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLRGVAP*VLVPAP
Trigger: TGGGGCAGGTACAAGGACTCAGGGAGCAACTCCTCT...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp TGCGATAGGAGCAGGAGGCGGGGAATAAATAACGGGAACATGCACTCTGACTGGAGCCCCTTGTCCTGCTaGCCTCCTTCTGGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: CDRSRRRGINNGNMHSDWSPLSC*PPSGGP
Trigger: AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCT...CCAGTCAGAGTGCATGTTCCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACCTCTCCCTCAGACTCTaGCTGCTGGTAGCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDLSLRL*LLVAAE
Trigger: TTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAG...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGACCAAGGGCTGTCTCCTaGGTCCTCTGCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGPRAVS*VLCCPP
Trigger: AGGAGGGCAGCAGAGGACCCAGGAGACAGCCCTTGG...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTTGGACTTGGTACAGGTaGGCCAAGGGCTGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPWTWYR*AKGCLL
Trigger: CAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCA...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCAGCAGCAAATATCCCTaGGCAGAACCAGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTSSKYP*AEPATL
Trigger: CAGCGTGGCTGGTTCTGCCCAGGGATATTTGCTGCT...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTAACATGCACTCTGACTaGAGCCCCAGGACCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPNMHSD*SPRTRS
Trigger: GCTCCTGGTCCTGGGGCTCCAGTCAGAGTGCATGTT...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACAGCTCCGTGGTGGGCTaGGATAGGAGCAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDSSVVG*DRSRRR
Trigger: CCGCCTCCTGCTCCTATCGCAGCCCACCACGGAGCT...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp GCCGCTTCCAGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGGCCACCAGATCCAACTaGGGAAACTGGAGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: AASREAMAEAWSTQTIQMATRSN*GNWSRG
Trigger: CCCTCTACTCCAGTTTCCCCAGTTGGATCTGGTGGC...CATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCTGGAAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR TCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACCGGGAACATGCACTCTaGCTGGAGCCCCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDREHAL*LEPQDQ
Trigger: CTGGTCCTGGGGCTCCAGTCAGAGTGCATGTTCCCG...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCCTACCACAGAGGAGTTaGTCCCTGAGTCCTTGTACC +
Preference number: 2 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLLPQRS*SLSPCT
Trigger: GGTACAAGGACTCAGGGAGCAACTCCTCTGTGGTAG...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp CTCTCTTCCACCTGGGTTCCTCCTGAATTGCCTTTCCGTGTCTCTTCCCTCAAACTGCTGCCCTCCTTCTaGAGGGCCTGGCCTTCTATC +
Preference number: 2 (lower is better)
Translates to: LSSTWVPPELPFRVSSLKLLPSF*RAWPSI
Trigger: GATAGAAGGCCAGGCCCTCCAGAAGGAGGGCAGCAG...TTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCGTGGCACTCCAGCCTTaGCCGCGCAGAGCACGCGGT +
Preference number: 2 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPVALQP*PRRARG
Trigger: ACCGCGTGCTCTGCGCGGCCAAGGCTGGAGTGCCAC...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCTCTGACCAGAATTCATaGCCCAGGGTGTCTAGGCTC +
Preference number: 2 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLSDQNS*PRVSRL
Trigger: GAGCCTAGACACCCTGGGCCATGAATTCTGGTCAGA...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp CCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTGACATCATTCCCCTCACGGTATTTGCACCAATaGCAGGGGAAGGAGCCGTTG +
Preference number: 2 (lower is better)
Translates to: PFHTTDRFTGRSLTSFPSRYLHQ*QGKEPL
Trigger: CAACGGCTCCTTCCCCTGCCATTGGTGCAAATACCG...TGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR CCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAACACAGCGATAAGAATTaGCCCTGCATGGCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKHSDKN*PCMAGR
Trigger: TCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTG...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR TCA 90 bp AACCCTTTGCAGGATACCACAGAGATGGATGGCTCTAGAAGACCAAGGACAAGCGGGTGTCTAGGCTCATaGCTACCACAGAGGAGTTGC +
Preference number: 2 (lower is better)
Translates to: NPLQDTTEMDGSRRPRTSGCLGS*LPQRSC
Trigger: GCAACTCCTCTGTGGTAGTCATGAGCCTAGACACCC...GCTTGTCCTTGGTCTTCTAGAGCCATCCATCTCTGTGGTATCCTGCAAAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp GCCGCTTCCAGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGCTGAGTCCTTGTACCTaGCCCATAGCTAATAAAGGT +
Preference number: 2 (lower is better)
Translates to: AASREAMAEAWSTQTIQMLSPCT*PIANKG
Trigger: ACCTTTATTAGCTATGGGGCAGGTACAAGGACTCAG...CATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCTGGAAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp TCGGCCTTCCAGAAAGGCGCAGTCAGCCGCATTGTTGGTGCAAACATGGCGGTAAGGACTGGTGAACACTaGAGTTATAGAAGACAAAGT +
Preference number: 2 (lower is better)
Translates to: SAFQKGAVSRIVGANMAVRTGEH*SYRRQS
Trigger: ACTTTGTCTTCTATAACTGCAGTGTTCACCAGTCCT...TACCGCCATGTTTGCACCAACAATGCGGCTGACTGCGCCTTTCTGGAAGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR TCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCTCAACACTTGCAGTTTaGAAAGATCAACTCAGACTA +
Preference number: 2 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTSTLAV*KDQLRL
Trigger: TAGTCTGAGTTGATCTTTTCAAACTGCAAGTGTTGA...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR GCA 90 bp ATGACAAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTGACAGACAAAGTCCACAGATaGAAACTTCTTCCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: MTKLPFHTTDRFTGRSLTDKVHR*KLLPCL
Trigger: GAGACAGGGAAGAAGTTTGCATCTGTGGACTTTGTC...TGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR CCA 90 bp CATACATATATATATGTACAGGGTCCATTAAAAACGTACTGTTGCTCCTTGAGGCACAGCCCCCACACCTaGACTTGGTACAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: HTYIYVQGPLKTYCCSLRHSPHT*TWYRWA
Trigger: GGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTG...CCTCAAGGAGCAACAGTACGTTTTTAATGGACCCTGTACATATATATATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 90 bp ACATATATATATGTACAGGGTCCATTAAAAACGTACTGTTGCTCCTaGAGGGCAGAGGTGGACACAGTTGACCTCCAGTCCCTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: TYIYVQGPLKTYCCS*RAEVDTVDLQSLGS
Trigger: TGACCCAAGGGACTGGAGGTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACCCTGTACATATATATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CCA 90 bp AAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTGACATCATTTTGTTGGTGCAAACATaGCGGTATTTGCACCAATGG +
Preference number: 2 (lower is better)
Translates to: KVAIPHNRQVHRQIADIILLVQT*RYLHQW
Trigger: CCATTGGTGCAAATACCGCCATGTTTGCACCAACAA...AATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR GCA 90 bp CATACATATATATATGTACAGGGTCCATTAAAAACGTACTGTTGCTCCTTGAGGACCACTAGCAGCTCTTaGCAAGCAGCAAATATCCCT +
Preference number: 2 (lower is better)
Translates to: HTYIYVQGPLKTYCCSLRTTSSS*QAANIP
Trigger: AGGGATATTTGCTGCTTGGCAAGAGCTGCTAGTGGT...CCTCAAGGAGCAACAGTACGTTTTTAATGGACCCTGTACATATATATATGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp TATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTaGCCCACGGCAGCAAGCCCCAGGCACAGAGGCGGC +
Preference number: 3 (lower is better)
Translates to: YPWAEPATLCYP*PTAASPRHRGG
Trigger: GCCGCCTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp CCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTaGGCCAAGGGCTGTCTCCTGGGTCCTCTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PNHSPHTWTWYR*AKGCLLGPLLP
Trigger: GGGCAGCAGAGGACCCAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GGGCCAGGACCCAACCACAGCCCCCACACCTGGACTTaGTACAGGTGGGCCAAGGGCTGTCTCCTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: GPGPNHSPHTWT*YRWAKGCLLGP
Trigger: AGGACCCAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTaGAGGGCCTGGCCTTCTATCTCGGCCCCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: ELVQPLVLLPSF*RAWPSISAPQR
Trigger: CCTCTGAGGGGCCGAGATAGAAGGCCAGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp CTCTCTCCCCAGCAGAAGGATGTGGCACTCCAGCCTTaGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGT +
Preference number: 3 (lower is better)
Translates to: LSPQQKDVALQP*PRRARGESEGG
Trigger: ACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAGGCTGGAGTGCCACATCCTTCTGCTGGGGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CAA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTTGTGGCACTCCAGCCTaGGCCGCGCAGAGCACGCGG +
Preference number: 3 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPCGTPA*AAQSTR
Trigger: CCGCGTGCTCTGCGCGGCCAAGGCTGGAGTGCCACA...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp AAGGGAAAGACCAGGCAGGAAGGGGGATGGGGCCCATaGCAGGACGGCAGTACCAAGAGTGTTAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: KGKTRQEGGWGP*QDGSTKSVRAR
Trigger: CCTGGCCCTAACACTCTTGGTACTGCCGTCCTGCCATGGGCCCCATCCCCCTTCCTGCCTGGTCTTTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp GACACCCACATGGGCAAGGTGGCCTGTAGGACAAAGTaGGGCTGGCCTATTCTGAGGGAGCCTGGGGACGTG +
Preference number: 3 (lower is better)
Translates to: DTHMGKVACRTK*GWPILREPGDV
Trigger: CACGTCCCCAGGCTCCCTCAGAATAGGCCAGCCTCACTTTGTCCTACAGGCCACCTTGCCCATGTGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp CGGTGGCCTGTTATCCTCCAGAGCTCCGTGGTGGGCTaGGATAGGAGCAGGAGGCGGGGAATAAATAACGGG +
Preference number: 3 (lower is better)
Translates to: RWPVILQSSVVG*DRSRRRGINNG
Trigger: CCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCAGCCCACCACGGAGCTCTGGAGGATAACAGGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp ACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTaGGACGGTGGCCTGTTATCCTCCAGAGCTCCGTGG +
Preference number: 3 (lower is better)
Translates to: TGNIRGGEDKGW*DGGLLSSRAPW
Trigger: CCACGGAGCTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp CCAGGTGCAAAGGGAAAGACCAGGCAGGAAGGGGGATaGGGCCCATGGCAGGACGGCAGTACCAAGAGTGTT +
Preference number: 3 (lower is better)
Translates to: PGAKGKTRQEGG*GPWQDGSTKSV
Trigger: AACACTCTTGGTACTGCCGTCCTGCCATGGGCCCCATCCCCCTTCCTGCCTGGTCTTTCCCTTTGCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp AGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTaGATGGCAGGGAGAGGAAGGCGAGGGCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: RNPYIHSDKNWP*MAGRGRRGPGP
Trigger: GGGTCCTGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp ACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATaGCAGGGAGAGGAAGGCGAGGGCCAGGACCCAACC +
Preference number: 3 (lower is better)
Translates to: TLTSTAIRIGPA*QGEEGEGQDPT
Trigger: GGTTGGGTCCTGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp CCTGCTGCTCTGTCTAGCTGTCCAACCATAAGAGAGTaGGGCAGCTGGAGAGCAGAGCCAGCCCAAGGCATG +
Preference number: 3 (lower is better)
Translates to: PAALSSCPTIRE*GSWRAEPAQGM
Trigger: CATGCCTTGGGCTGGCTCTGCTCTCCAGCTGCCCCACTCTCTTATGGTTGGACAGCTAGACAGAGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp TTGCTGGCCTGTGCCTGGACTCAATGCAGTGTCTCTTaGGGACACATCAAGGCCCTCACCCCTGCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: LLACAWTQCSVS*GHIKALTPAAL
Trigger: CAGAGCAGCAGGGGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CAA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTAATTGGTCCAGCCCCTaGTCCTGCTGCCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: HLGEVEATSDGSSRALGFNWSSP*SCCPPS
Trigger: AGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATT...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp CAGATGTCAGAGCCCAGTCCAGAAGTAGCAGGGAAATaGGGCCTGGCCCTGATGGCTGTGCCGAGAAGATGC +
Preference number: 3 (lower is better)
Translates to: QMSEPSPEVAGK*GLALMAVPRRC
Trigger: GCATCTTCTCGGCACAGCCATCAGGGCCAGGCCTCATTTCCCTGCTACTTCTGGACTGGGCTCTGACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp CTCAGCAGGAACCCTTACATCCACAGCGATAAGAATTaGCCCTGCATGGCAGGGAGAGGAAGGCGAGGGCCA +
Preference number: 3 (lower is better)
Translates to: LSRNPYIHSDKN*PCMAGRGRRGP
Trigger: TGGCCCTCGCCTTCCTCTCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GAGAAGGGTTCGCCTAGCCATTGTCCACATGTCACTTaGAAGTGGGGTCTGCAGGCCCTCCATAGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: EKGSPSHCPHVT*KWGLQALHRRG
Trigger: TCCCCTCCTATGGAGGGCCTGCAGACCCCACTTCCAAGTGACATGTGGACAATGGCTAGGCGAACCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GCCACCAGATCCAACTGGGGAAACTGGAGTAGAGGGTaGCAGTCGGACCCCTCTGAACCAACAGAGGTTGCT +
Preference number: 3 (lower is better)
Translates to: ATRSNWGNWSRG*QSDPSEPTEVA
Trigger: AGCAACCTCTGTTGGTTCAGAGGGGTCCGACTGCCACCCTCTACTCCAGTTTCCCCAGTTGGATCTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp ATGCTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTaGTCCAGGCCACCTCACCTCCTACCTGACACCCAC +
Preference number: 3 (lower is better)
Translates to: MLKCLRTNTLGS*SRPPHLLPDTH
Trigger: GTGGGTGTCAGGTAGGAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp TCGGACCCCTCTGAACCAACAGAGGTTGCTGGCCTGTaGCTGGACTCAATGCAGTGTCTCTTGGGGACACAT +
Preference number: 3 (lower is better)
Translates to: SDPSEPTEVAGL*LDSMQCLLGTH
Trigger: ATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAACCTCTGTTGGTTCAGAGGGGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp GGCCTTCCAGAAAGGCGCAGTCAGCCGCATTGTTGGTaGAAACATGGCGGTATTTGCACCAATGGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: GLPERRSQPHCW*KHGGICTNGRG
Trigger: TCCCCTGCCATTGGTGCAAATACCGCCATGTTTGCACCAACAATGCGGCTGACTGCGCCTTTCTGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR CCA 72 bp AGTGTGAGGGACCACAAGACTAGCAGCCCATGGATGTaGGGTGTGCTGTCCCCAGCACTGATAATGGTCCTG +
Preference number: 3 (lower is better)
Translates to: SVRDHKTSSPWM*GVLSPALIMVL
Trigger: CAGGACCATTATCAGTGCTGGGGACAGCACACCCCACATCCATGGGCTGCTAGTCTTGTGGTCCCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GCTTGGAGTGTGAGGGACCACAAGACTAGCAGCCCATaGATGTGGGGTGTGCTGTCCCCAGCACTGATAATG +
Preference number: 3 (lower is better)
Translates to: AWSVRDHKTSSP*MWGVLSPALIM
Trigger: CATTATCAGTGCTGGGGACAGCACACCCCACATCCATGGGCTGCTAGTCTTGTGGTCCCTCACACTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GACCCTAGTATCAGCCCAGGGAATGAGCCAAAGAGTTaGGGTGGGAGTCTGACCAGAATTCATGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: DPSISPGNEPKS*GGSLTRIHGPG
Trigger: CCCTGGGCCATGAATTCTGGTCAGACTCCCACCCCAACTCTTTGGCTCATTCCCTGGGCTGATACTAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CAA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTTGTCCACATGTCACTaGGAAGTGGGGTCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: RLNASTVMQVHSSAPKARLSTCH*EVGSAG
Trigger: GCCTGCAGACCCCACTTCCAAGTGACATGTGGACAA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CAA 90 bp GAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGATGTCAGAGCCCAGTCCAGCCAGGGCCCTTGGTTTaGCTCTCTTCCACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: EMDGSRRPRTSRCQSPVQPGPLV*LSSTWV
Trigger: AACCCAGGTGGAAGAGAGCAAAACCAAGGGCCCTGG...CTGGACTGGGCTCTGACATCTGCTTGTCCTTGGTCTTCTAGAGCCATCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp GGCCACCTCTCTCTCAGGAAAACCACTAGCAGCTCTTaGCAAGCAGCAAATATCCCTGGGCAGAACCAGCCA +
Preference number: 3 (lower is better)
Translates to: GHLSLRKTTSSS*QAANIPGQNQP
Trigger: TGGCTGGTTCTGCCCAGGGATATTTGCTGCTTGGCAAGAGCTGCTAGTGGTTTTCCTGAGAGAGAGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR GCA 72 bp AAGCCAAGAAATGTGAATTGGTCCAGCCCCTTGTCCTaGTGCCCTCCTTCTGGAGGGCCTGGCCTTCTATCT +
Preference number: 3 (lower is better)
Translates to: KPRNVNWSSPLS*CPPSGGPGLLS
Trigger: AGATAGAAGGCCAGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp AGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTaGTTTTGCTCTCTTCCACCTGGGTTCCTCCTGAAT +
Preference number: 3 (lower is better)
Translates to: SRGHIRWQLQGP*FCSLPPGFLLN
Trigger: ATTCAGGAGGAACCCAGGTGGAAGAGAGCAAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp ACCCCTCTGAACCAACAGAGGTTGCTGGCCTGTGCCTaGACTCAATGCAGTGTCTCTTGGGGACACATCAAG +
Preference number: 3 (lower is better)
Translates to: TPLNQQRLLACA*TQCSVSWGHIK
Trigger: CTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAACCTCTGTTGGTTCAGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GGCTCTGCCGCTTCCAGAGAAGCAATGGCCGAGGCCTaGTCTACTCAGACCATCCAAATGACCAGGGATTTT +
Preference number: 3 (lower is better)
Translates to: GSAASREAMAEA*STQTIQMTRDF
Trigger: AAAATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCTGGAAGCGGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GCATTGTTGGTGCAAACATGGCGGTATTTGCACCAATaGCAGGGGAAGGAGCCGTTGACACATGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: ALLVQTWRYLHQ*QGKEPLTHARQ
Trigger: CTGCCTGGCATGTGTCAACGGCTCCTTCCCCTGCCATTGGTGCAAATACCGCCATGTTTGCACCAACAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR CAA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTGGGTTCCTCCTGAATaGCCTTTCCGTGTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RLNASTVMQVHSSAPKARWVPPE*PFRVSS
Trigger: GGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp CTGACCAGAATTCATGGCCCAGGGTGTCTAGGCTCATaGCTACCACAGAGGAGTTGCTCCCTGAGTCCTTGT +
Preference number: 3 (lower is better)
Translates to: LTRIHGPGCLGS*LPQRSCSLSPC
Trigger: ACAAGGACTCAGGGAGCAACTCCTCTGTGGTAGTCATGAGCCTAGACACCCTGGGCCATGAATTCTGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp ATTGAGCCTAGAAGCTGTGCGTGTTCCAGGCAGAGCTaGAAGAACTGGGGGCTTCCATCTGAAGCCTACAAC +
Preference number: 3 (lower is better)
Translates to: IEPRSCACSRQS*KNWGLPSEAYN
Trigger: GTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACGCACAGCTTCTAGGCTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp TTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTaGAGCCTACAACCAGGGAAGACTTTAGGGGAAACT +
Preference number: 3 (lower is better)
Translates to: FQAELEELGASI*SLQPGKTLGET
Trigger: AGTTTCCCCTAAAGTCTTCCCTGGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR-3UTR CAA 90 bp ATGACAAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTGACACAGTCAGCCGCATTGTaGGTGCAAACATGGCGGTAT +
Preference number: 3 (lower is better)
Translates to: MTKLPFHTTDRFTGRSLTQSAAL*VQTWRY
Trigger: ATACCGCCATGTTTGCACCAACAATGCGGCTGACTG...TGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR CAA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCTTCAACACTTGCAGTTaGAAAAGATCAACTCAGACT +
Preference number: 3 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTFNTCS*KRSTQT
Trigger: AGTCTGAGTTGATCTTTTCAAACTGCAAGTGTTGAA...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp CATTCCACACAACCGACAGGTTCACAGGCAGATCGCTaGCATCATTCCCCTCATAGGAGTACTCAGACATGT +
Preference number: 3 (lower is better)
Translates to: HSTQPTGSQADR*HHSPHRSTQTC
Trigger: ACATGTCTGAGTACTCCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
3UTR-3UTR CAA 90 bp CTCTCTTCCACCTGGGTTCCTCCTGAATTGCCTTTCCGTGTCTCTTCCCTCAAAATTAAAAACGTACTGTaGCTCCTTGAGGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LSSTWVPPELPFRVSSLKIKNVL*LLEGRG
Trigger: ACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAAT...TTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp GCCCTTGGTTTTGCTCTCTTCCACCTGGGTTCCTCCTaGATTGCCTTTCCGTGTCTCTTCCCTCAAATAATT +
Preference number: 3 (lower is better)
Translates to: ALGFALFHLGSS*IAFPCLFPQII
Trigger: AATTATTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAGCAAAACCAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR TCA 72 bp CTAAATATATCTACTCTAGCTTGTGTAGCACCGATGTaGGCCACCAGATCCAACTGGGGAAACTGGAGTAGA +
Preference number: 3 (lower is better)
Translates to: LNISTLACVAPM*ATRSNWGNWSR
Trigger: TCTACTCCAGTTTCCCCAGTTGGATCTGGTGGCTCACATCGGTGCTACACAAGCTAGAGTAGATATATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CCA 72 bp GTGTCTCTTCCCTCAAATAATTGTACAGCACCCCATTaGGGCCAGGGCCACACACACATATATATATATACA +
Preference number: 3 (lower is better)
Translates to: VSLPSNNCTAPH*GQGHTHIYIYT
Trigger: TGTATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGGGAAGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACCACTCGTACCCTCGCTaGCCCGACTGTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHHSYPR*PDCGCG
Trigger: GCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTG...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACTGCCCACGAAGAGCTTaGCCTGGCCCTGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHCPRRA*PGPGRV
Trigger: CACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCA...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp AGGGCCAGGACCCAACCACAGCCCCCACACCTGGACTaGGTACAGGTGGGCCAAGGGCTGTCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RARTQPQPPHLD*VQVGQGLSPGS
Trigger: GGACCCAGGAGACAGCCCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGGGAGCTGCAGCCGCTTaGGGGTACGGTCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTEGAAAA*GYGQHP
Trigger: GGGATGCTGACCGTACCCTCAAGCGGCTGCAGCTCC...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp ATATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTaGCCCCACGGCAGCAAGCCCCAGGCACAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ISLGRTSHAVLS*PHGSKPQAQRR
Trigger: CCGCCTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGATAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCTTCCTCGTTGGCCATaGGCCGGCGACTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: IPGQNQPRCAILAPRQQALPRWP*AGDWTE
Trigger: CTCTGTCCAGTCGCCGGCTCATGGCCAACGAGGAAG...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGGCACCTGGGACATGGTaGCTGACACATTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRAPGTW*LTHCAA
Trigger: AGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGC...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGTCCGTGCAGCCAGGGTaGTGGGCTTCACCACACCCA +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTESVQPG*WASPHP
Trigger: TGGGTGTGGTGAAGCCCATCACCCTGGCTGCACGGA...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGAGCACCTTGCCCACGTaGACGCCTAGCCGCACATCC +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTESTLPT*TPSRTS
Trigger: GGATGTGCGGCTAGGCGTGCACGTGGGCAAGGTGCT...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCCAGGCCCAGCTGTTTaGCCAGGGCCTGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHPGPAV*PGPVPA
Trigger: GGCCGGGACAGGCCCTGGCCAAACAGCTGGGCCTGG...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACCGGGTGGCCCAGCAATaGGCACTCCCGCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDRVAQQ*ALPPCC
Trigger: GCAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCG...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGTCTGCAGGGGCGAGTTaGTGCAGCCCAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTESAGAS*CSPAPC
Trigger: ACAAGGAGCTGGGCTGCATCAACTCGCCCCTGCAGA...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGCTGGGACATGGTGACTaGCACATTGCGCGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTELGHGD*HIARLD
Trigger: GTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAG...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGCTTTGTGCTGCCCCGTaGGGTTGGGTGCTTCACACA +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRLCAAP*GWVLHT
Trigger: TGTGTGAAGCACCCAACCTCACGGGGCAGCACAAAG...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACCCAGGAGCTTCTCCTTaGCCTGGGTCACGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHPGASP*PGSRCH
Trigger: GTGACACCGTGACCCAGGTCAAGGAGAAGCTCCTGG...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGGAATCTTGGGGTCTGTaGAGCGGCTGCTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRESWGL*SGCCHG
Trigger: ACCATGGCAGCAGCCGCTGCACAGACCCCAAGATTC...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCTGGCCCTGGCCGGGTaGCCCAGCAATGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHLALAG*PSNEHS
Trigger: GGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAG...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGCGCCGACTCCTTGGGTaGCTTCACGCGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTERRLLG*LHAVLL
Trigger: CAGAAGAACCGCGTGAAGCCACCCAAGGAGTCGGCG...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCTCTCTGGGGACAGCTTaGGAATCTTGGGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCSLGTA*ESWGLC
Trigger: GCACAGACCCCAAGATTCTCAAGCTGTCCCCAGAGA...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCACGAAGAGCTTGGCCTaGCCCTGGCCGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTTKSLA*PWPGGP
Trigger: TGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGT...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACTCGCTGACCCGACTGTaGCTGCGGCAGGTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHSLTRL*LRQVPC
Trigger: GCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGA...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACGAGTACGAGGAGTTCTaGCACTGCAGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHEYEEF*HCRLEL
Trigger: CAGCTCCAGCCTGCAGTGCCAGAACTCCTCGTACTC...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACGCCGCACTCAAAGCGTaGGTCTGCCTTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDAALKA*VCLEAE
Trigger: CTCTGCCTCAAGGCAGACCCACGCTTTGAGTGCGGC...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACGAACCACCAGGTGAGTaGGGCCCCAGTCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHEPPGE*GPSHWP
Trigger: TGGCCAGTGACTGGGGCCTCACTCACCTGGTGGTTC...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACGCACAATCTTGGAGGTaGAGAAGTGCTCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDAQSWR*RSARQR
Trigger: CCGCTGGCGAGCACTTCTTCACCTCCAAGATTGTGC...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGCCTGTGCGAACACAGTaGACAACACCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRPVRTQ*TTPPHP
Trigger: AGGATGAGGAGGTGTTGTTCACTGTGTTCGCACAGG...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTACTGGCGGTTGGGGCTaGGGACCAGGTCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: HLGEVEATSDGSSRALGFTGGWG*GPGHAG
Trigger: TCCTGCGTGACCTGGTCCTCAGCCCCAACCGCCAGT...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GCAGGGGAAGGAGCCGTTGACACATGCCAGGCAGGACTGGTGAACACTGCAGTTTTCCCGGGCAGAAGGTaGGTGGCAATGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGEGAVDTCQAGLVNTAVFPGRR*VAMDAA
Trigger: GGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAA...AACTGCAGTGTTCACCAGTCCTGCCTGGCATGTGTCAACGGCTCCTTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
CDS-3UTR TCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTACTCCCTGACCCTGTGTaGTGGGCGCCACTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLLPDPV*WAPLPG
Trigger: CCCGGGAAGTGGCGCCCATCACACAGGGTCAGGGAG...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCCCAGGTTGGTGCCCGTaGCTGTTAGGAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTPGWCP*LLGGSH
Trigger: GTGGGACCCTCCTAACAGTCACGGGCACCAACCTGG...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGCAACTTGTTGGAGGGTaGGTCTTTGCCCAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRQLVGG*VFAQLV
Trigger: CACAAGCTGGGCAAAGACTCACCCTCCAACAAGTTG...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACCCTGCCGCTGGGGTTTaGAAGGTCCACCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHPAAGV*KVHQNL
Trigger: AAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGG...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGCTGTTGAAGCGCAGTaGAGTGACTCGGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDAVEAQ*SDSGRA
Trigger: AGCCCGGCCCGAGTCACTGCACTGCGCTTCAACAGC...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGAGGCCAACAGGCGGTTaGCTGCATAGTCCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTERPTGG*LHSPAV
Trigger: TACTGCTGGACTATGCAGCCAACCGCCTGTTGGCCT...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGCTGATTTGCCATCGATaGGTGTGCCCACGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRLICHR*VCPRRA
Trigger: AGCTCTTCGTGGGCACACCCATCGATGGCAAATCAG...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACTTCACGCGGTTCTTCTaGCCCTGTGCGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHFTRFF*PCANTV
Trigger: CACTGTGTTCGCACAGGGCCAGAAGAACCGCGTGAA...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGGACACATTGCGCGGCTaGACAGTTAACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRDTLRG*TVNCTH
Trigger: GTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTC...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGCCCGGCACACCATGGTaGTGTCATTGTACACCATGC +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTEPGTPW*CHCTPC
Trigger: GCATGGTGTACAATGACACCACCATGGTGTGCCGGG...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTCAGCTGGGCAGTGGTaGCGAAGGGAACAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARSAGQW*RREQRR
Trigger: GCGCCGCTGTTCCCTTCGTCACCACTGCCCAGCTGA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCCATCCAGGAGGCTGGTaGGTCAGCTGGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTHPGGW*VSWAVV
Trigger: CACCACTGCCCAGCTGACTCACCAGCCTCCTGGATG...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCAGAGTCGGGCGAGGTAAGCTaGGTGTCTAGCTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGEGRIKDGGTVACYPPESGEVS*VSSCRV
Trigger: CACCCTGCAGCTAGACACGCAGCTTACCTCGCCCGA...CTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACGGCTGGTTGAAATCCTaGCCGCAGAAGTCGTCATCA +
Preference number: 4 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHGWLKS*PQKSSS
Trigger: TGATGACGACTTCTGCGGGCAGGATTTCAACCAGCC...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTACGCTGGGGCTCTTCTaGCCGCTCACAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPTLGLF*PLTGIL
Trigger: CAGGATGCCTGTGAGCGGGCAGAAGAGCCCCAGCGT...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAAAGCTTGGCCTGGCCCTaGCCGGGTGGCCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKSLAWP*PGGPAM
Trigger: CATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCT...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCACAGCGCCGACTCCTTaGGTGGCTTCACGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTTAPTP*VASRGS
Trigger: AGAACCGCGTGAAGCCACCCAAGGAGTCGGCGCTGT...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACCAATGCCTCCATACTTaGCGCGGATTCGAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHQCLHT*RGFEVH
Trigger: GTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTG...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACAGGCCGATGTCTGCTTaGGTACTAGTGCCACCGATG +
Preference number: 4 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDRPMSA*VLVPPM
Trigger: CATCGGTGGCACTAGTACCCAAGCAGACATCGGCCT...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCTTTGTAGTGTTCCCTTaGTGGCCAGCAGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCFVVFP*WPAAWL
Trigger: TAACCAGGCTGCTGGCCACCAAGGGAACACTACAAA...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp GGGACAGCCCCAGGCTGTGACTTATGTGGCCTAGCCTaGGGTATCTCACCTCTCCCTCAGACTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTAPGCDLCGLA*GISPLPQTLPA
Trigger: AGCAGGCAGAGTCTGAGGGAGAGGTGAGATACCCAAGGCTAGGCCACATAAGTCACAGCCTGGGGCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp GTTGCTGGCCTGTGCCTGGACTCAATGCAGTGTCTCTaGGGGACACATCAAGGCCCTCACCCCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VAGLCLDSMQCL*GTHQGPHPCCS
Trigger: AGAGCAGCAGGGGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp TGCGATAGGAGCAGGAGGCGGGGAATAAATAACGGGAACATGCACTCTGACTGGGTGTGCCCTCGATGGTaGCCGTGCCACCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CDRSRRRGINNGNMHSDWVCPRW*PCHPVA
Trigger: AGCCACTGGGTGGCACGGTCACCATCGAGGGCACAC...CCAGTCAGAGTGCATGTTCCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTTCCCGGGCAGAAGGTaGGTGGCAATGGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARFPGRR*VAMDAA
Trigger: GGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCAGAGCACTGGCCACAAAGGTaGGGAAGGCAGGTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SGEGRIKDGGTVACYPPEHWPQR*GRQVVD
Trigger: GTCCACAACCTGCCTTCCGCACCTTTGTGGCCAGTG...CTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GAAGCCAAGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGTGCCCTGTGAGGCACTaGCACAGGCCAACAGGCGGT +
Preference number: 4 (lower is better)
Translates to: EAKKCELVQPLVLLPSFWCPVRH*HRPTGG
Trigger: ACCGCCTGTTGGCCTGTGGCAGTGCCTCACAGGGCA...CCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACTCAGGAACTGGCAGATaGCCTGTGAGGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDSGTGR*PVRHCH
Trigger: GTGGCAGTGCCTCACAGGGCATCTGCCAGTTCCTGA...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTTGTTCCTTGCGGTGGTaGGGCTCGCCCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPCSLRW*GSPSLK
Trigger: CTTCAAGCTGGGCGAGCCGCACCACCGCAAGGAACA...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTACAGGTAGTGTTCCTTaGGGTGGTGCGGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPTGSVP*GGAARP
Trigger: TGGGCGAGCCGCACCACCGCAAGGAACACTACCTGT...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACGAAACCAATCTCATCTaGCCGCTCTCCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDETNLI*PLSQFW
Trigger: CCAGAACTGGGAGAGCGGCCAGATGAGATTGGTTTC...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCTGTCTGAAGGGATCTTaGGCTGAGATGACACAAACT +
Preference number: 4 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCCLKGS*AEMTQT
Trigger: AGTTTGTGTCATCTCAGCTCAAGATCCCTTCAGACA...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp ACTCGGCCTTCCAGAAAGGCGCAGTCAGCCGCATTGTTGGTGCAAACATGGCGGCCTCAAAGGAGCAGTTaGCACCAGCTGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRPSRKAQSAALLVQTWRPQRSS*HQLRGQ
Trigger: CTGACCTCTCAGCTGGTGTCAACTGCTCCTTTGAGG...CCGCCATGTTTGCACCAACAATGCGGCTGACTGCGCCTTTCTGGAAGGCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
CDS-3UTR TCA 90 bp ACAAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTGACATCACTCCCTGACCCTGTGTaGTGGGCGCCACTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TKLPFHTTDRFTGRSLTSLPDPV*WAPLPG
Trigger: CCCGGGAAGTGGCGCCCATCACACAGGGTCAGGGAG...TGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
CDS-3UTR TCA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCTCATGTCTTGGTCACTaGTTGCAGGCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IPGQNQPRCAILAPRQQASCLGH*LQASWQ
Trigger: TTGCCAAGATGCCTGCAATCAGTGACCAAGACATGA...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTATACTCCACGCCAGCCTaGTCGCAGCCAATGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLYSTPA*SQPMGN
Trigger: GTTCCCCATTGGCTGCGAGCAGGCTGGCGTGGAGTA...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCAGAGCTAGAGCAGATGCTGTaGAGGACACACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGEGRIKDGGTVACYPPELEQML*RTHQPQ
Trigger: CTGTGGCTGGTGTGTCCTGCACAGCATCTGCTCTAG...CTCTGGAGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTGGAGCCGTTGACACATaGCAGGCAGGACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HLGEVEATSDGSSRALGFGAVDT*QAGLVN
Trigger: GTTCACCAGTCCTGCCTGGCATGTGTCAACGGCTCC...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGGGCAGGCATCTGTTATaGTGTTCTTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTEGRHLL*CSCGCR
Trigger: TCGACATCCACAAGAACAGCATAACAGATGCCTGCC...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCCCACCTGCTCCAGTTTaGTTCGAAGCCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTPPAPV*FEAAAF
Trigger: GAAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGG...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCGTAGATGTCAAAGGCTaGGAACTTGGACAATGTGTC +
Preference number: 4 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCVDVKG*ELGQCV
Trigger: GACACATTGTCCAAGTTCCCAGCCTTTGACATCTAC...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAATCGGGCCGGGCTGCCTaGGATGTGGAAAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKSGRAA*DVEKAL
Trigger: GAGTGCCTTTTCCACATCCCAGGCAGCCCGGCCCGA...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGATGTCAGAGCCCAGTCCAGCGGCTGCTGCCATGGTaGGCATGCATCCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EMDGSRRPRTSRCQSPVQRLLPW*ACIQEA
Trigger: AGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCG...CTGGACTGGGCTCTGACATCTGCTTGTCCTTGGTCTTCTAGAGCCATCCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGACAGCGGCTGCTGCCATaGTGGGCATGCATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGQRLLP*WACIQE
Trigger: CTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTG...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGCACAGAGGCAGGAAATGCTTCTTaGTCAACAGCTGTCCGAACA +
Preference number: 4 (lower is better)
Translates to: NQPRCAILAPRQQAPGTEAGNAS*STAVRT
Trigger: TGTTCGGACAGCTGTTGACCAAGAAGCATTTCCTGC...CTCTGTGCCTGGGGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTATCCCACGGTCACGCATaGAGAAGCTACGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLSHGHA*RSYAGP
Trigger: AGGCCCAGCGTAGCTTCTCCATGCGTGACCGTGGGA...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCATAGAGCAACTTGTTaGAGGGTGAGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPGQNQPRCAILAPRQQAHRATC*RVSLCP
Trigger: TGGGCAAAGACTCACCCTCCAACAAGTTGCTCTATG...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GCAGGGGAAGGAGCCGTTGACACATGCCAGGCAGGACTGGTGAACACTGCAGTTTGCTCTCAGTCTCCGTaGAGTCCTCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGEGAVDTCQAGLVNTAVCSQSP*SPQRSS
Trigger: ACTGCTCCTTTGAGGACTTCACGGAGACTGAGAGCA...AACTGCAGTGTTCACCAGTCCTGCCTGGCATGTGTCAACGGCTCCTTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
CDS-3UTR TCA 90 bp TGCGATAGGAGCAGGAGGCGGGGAATAAATAACGGGAACATGCACTCTGACTGGGGAAGGAGGAGCTGTTaGGTACCAGCAGCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: CDRSRRRGINNGNMHSDWGRRSC*VPAACA
Trigger: TGCGCACGCTGCTGGTACTCAACAGCTCCTCCTTCC...CCAGTCAGAGTGCATGTTCCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCTCTGAGTCGTGGATCTaGTGCTTGTCGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTSESWI*CLSACS
Trigger: TGAGCAGGCCGACAAGCATCAGATCCACGACTCAGA...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTGCCATCGATGGGTGTaGCCACGAAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARCHRWV*PRRAWP
Trigger: AGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGCGCTCACAGGCATCCTaGCTAGAGCAGATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARRSQAS*LEQMLC
Trigger: GCACAGCATCTGCTCTAGGCAGGATGCCTGTGAGCG...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACGGCTGGACAGTTAACTaGACACACTGCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLCLDSMQCLLGTHQGPHGWTVN*THCSRS
Trigger: TGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCC...GTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATCTGCCATGGTGGGCATaGATCCAGGAGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDLPWWA*IQEAGE
Trigger: CTCACCAGCCTCCTGGATGCATGCCCACCATGGCAG...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTCCTGCTCGCAGCCAATaGGGAACTCCACGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPPARSQ*GTPRKS
Trigger: ACTCTTACGTGGAGTTCCCCATTGGCTGCGAGCAGG...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTCCGAGGGCCTGTCTCTaGGGACAGCTTGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: HLGEVEATSDGSSRALGFPRACL*GQLENL
Trigger: AAGATTCTCAAGCTGTCCCCAGAGACAGGCCCTCGG...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGATTGCCAGGAGCAGGTaGCAGGAGATTCCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARIARSR*QEIPPL
Trigger: AAGGGGCGGAATCTCCTGCCACCTGCTCCTGGCAAT...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp CTGAAGAAGCCAAGAAATGTGAATTGGTCCAGCCCCTaGTCCTGCTGCCCTCCTTCTGGAGGGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LKKPRNVNWSSP*SCCPPSGGPGL
Trigger: AAGGCCAGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTTCACAGGCAGATCGCTaGCATCATTCCCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPSQADR*HHSPHR
Trigger: CCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGA...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACTTGGAGGTGAAGAAGTaGTCGCCAGCGGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDLEVKK*SPAASG
Trigger: GCCCGACGCCGCTGGCGAGCACTTCTTCACCTCCAA...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CGTGTTCCAGGCAGAGCTGGAAGAACTGGGGGCTTCCATCTGAAGCCTACAACCCTCGCATGGCATATGTaGGGTAGTCAAGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVPGRAGRTGGFHLKPTTLAWHM*GSQGRG
Trigger: TCCCCTTCCTTGACTACCGCACATATGCCATGCGAG...GGTTGTAGGCTTCAGATGGAAGCCCCCAGTTCTTCCAGCTCTGCCTGGAACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATTTGAACTGGCTGAGATaGAGCCGGGACTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDLNWLR*SRDCSA
Trigger: GGCAGAGCAGTCCCGGCTGCATCTCAGCCAGTTCAA...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CTCTCTTCCACCTGGGTTCCTCCTGAATTGCCTTTCCGTGTCTCTTCCCTCAAAGACCGTGCCACCCAGTaGCTGGTTGAAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSTWVPPELPFRVSSLKDRATQ*LVEILP
Trigger: GGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTC...TTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATAGCACGAGCGGCACCTaGGACATGGTGACTGACACA +
Preference number: 4 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDSTSGT*DMVTDT
Trigger: TGTGTCAGTCACCATGTCCCAGGTGCCGCTCGTGCT...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GAAGCCAAGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGCTCATGCTGTTGAACTaGCTGAGATGCAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: EAKKCELVQPLVLLPSFWLMLLN*LRCSRD
Trigger: GTCCCGGCTGCATCTCAGCCAGTTCAACAGCATGAG...CCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
3UTR CAA 72 bp CTGCTGGTAGCAGCTGAAGAAGCCAAGAAATGTGAATaGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLVAAEEAKKCE*VQPLVLLPSFW
Trigger: CCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTCTTCAGCTGCTACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCAGTGGGGAAGTATTCTaGTTTGCCATCGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTSGEVF*FAIDGC
Trigger: ACACCCATCGATGGCAAATCAGAATACTTCCCCACT...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACTCTGGGGGTTGTCAATaGCAAAGTTGCCATTCCACA +
Preference number: 4 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDSGGCQ*QSCHST
Trigger: TGTGGAATGGCAACTTTGTCATTGACAACCCCCAGA...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTACAATCTGTTCTGCGCTaGTGTACTCGCTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLQSVLR*CTRSPQ
Trigger: CTGTGGAGAGCGAGTACATCAGCGCAGAACAGATTG...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATAGTCAAGGAAGGGGATaGCAGCACCATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDSQGRG*QHHPGH
Trigger: GTGACCTGGATGGTGCTGGCATCCCCTTCCTTGACT...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACGTGCCACCCAGTGGCTaGTTGAAATCCTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDVPPSG*LKSCPQ
Trigger: CTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCAC...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAACGGTATTTGCACCAATaGCAGGGGAAGGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKRYLHQ*QGKEPL
Trigger: CAACGGCTCCTTCCCCTGCCATTGGTGCAAATACCG...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCGAAACAGCACTCGCATaGCATATGTGCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTETALA*HMCGSQ
Trigger: TTGACTACCGCACATATGCCATGCGAGTGCTGTTTC...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTGCTTTAGCACTCCTGTaGCATACTCCATCTCACCCT +
Preference number: 4 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPALALL*HTPSHP
Trigger: AGGGTGAGATGGAGTATGCCACAGGAGTGCTAAAGC...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAATCACGTTGGTCCAGGTaGTCGTGGTTCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKSRWSR*SWFFTR
Trigger: CCTGGTGAAGAACCACGACCACCTGGACCAACGTGA...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CGACAGGTTCACAGGCAGATCGCTGACATCATTCCCCTCATAGGAGTACTCAGAGTGAGTGGCAATGGATaGGGCCATCTTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RQVHRQIADIIPLIGVLRVSGNG*GHLPGC
Trigger: GCATCCTGGAAGATGGCCGCATCCATTGCCACTCAC...TCTGAGTACTCCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205121.2
CDS-3UTR GCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCCTGCGGCAGGTTCCGTaGAGCCAGGGTGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPLRQVP*SQGDGL
Trigger: AAGCCCATCACCCTGGCTGCACGGAACCTGCCGCAG...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTTATTTTCCCTCTCAATaGCTCCATACTTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: HLGEVEATSDGSSRALGFYFPSQ*LHTWRG
Trigger: TCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATA...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTTCTCCACATTGGCCTaGACCTCCATCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARFSTLA*TSISFS
Trigger: ACTGAAGGAGATGGAGGTGCAGGCCAATGTGGAGAA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CCTCAAATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATAACAGGGCCTGTCACATaGGCCCGAAGCAGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: PQIIVQHPIGARATHTYITGPVT*ARSRVR
Trigger: CCTAACCCTGCTTCGGGCCCATGTGACAGGCCCTGT...TATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTAAGAAGGCAGGATCTGTaGGCAGTCCTCAGACATGTT +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLRRQDL*AVLRHV
Trigger: AACATGTCTGAGGACTGCCCACAGATCCTGCCTTCT...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CCTCAAATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATAACTCTGGCGCAAGGCTaGGCACTTGTAGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PQIIVQHPIGARATHTYITLAQG*ALVEVG
Trigger: GCCCACCTCTACAAGTGCCCAGCCTTGCGCCAGAGT...TATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GAAGCCAAGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGCTTGGACAATGTGTCTaGAGGGATCTTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EAKKCELVQPLVLLPSFWLGQCV*RDLELR
Trigger: TCTCAGCTCAAGATCCCTTCAGACACATTGTCCAAG...CCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCAGCCCAGCTCCTTGTTaGGCAGCCAAGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPSPAPC*AAKAGR
Trigger: TCTCCCTGCCTTGGCTGCTCAACAAGGAGCTGGGCT...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CCTCAAATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATACACCCAGTGGCTGGTTaGAATCCTGCCCGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQIIVQHPIGARATHTYIHPVAG*NPARRS
Trigger: ACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTG...TATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AGAAATGTGAATTGGTCCAGCCCCTTGTCCTGCTGCCCTCCTTCTGGAGGGCCTATACGAACTGCTCGCTaGGGAAACTGTACACATAGT +
Preference number: 4 (lower is better)
Translates to: RNVNWSSPLSCCPPSGGPIRTAR*GNCTHS
Trigger: ACTATGTGTACAGTTTCCGCAGCGAGCAGTTCGTAT...AGGCCCTCCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp AACCCTTTGCAGGATACCACAGAGATGGATGGCTCTAGAAGACCAAGGACAAGCGTGAGTGGCAATGGATaGGGCCATCTTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: NPLQDTTEMDGSRRPRTSVSGNG*GHLPGC
Trigger: GCATCCTGGAAGATGGCCGCATCCATTGCCACTCAC...GCTTGTCCTTGGTCTTCTAGAGCCATCCATCTCTGTGGTATCCTGCAAAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGAACACAGCTACATCACTaGCAGCATTCAGATGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGTQLHH*QHSDGS
Trigger: GGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGT...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTAGTCTTGGTCACTGATTaGAGGCATCTTGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLVLVTD*RHLGNV
Trigger: GACATTGCCAAGATGCCTGCAATCAGTGACCAAGAC...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAAATTGTGTCCACCACCTaGTCCAGTTTGCTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKIVSTT*SSLLRS
Trigger: GCTTCGAAGCAAACTGGAGCAGGTGGTGGACACAAT...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GCCTGTGCCTGGACTCAATGCAGTGTCTCTTGGGGACACATCAAGGCCCTCACCGACACAAACTCATCCTaGTACACAAAGCCAAACATG +
Preference number: 4 (lower is better)
Translates to: ACAWTQCSVSWGHIKALTDTNSS*YTKPNM
Trigger: CATGTTTGGCTTTGTGTACCAGGATGAGTTTGTGTC...GGTGAGGGCCTTGATGTGTCCCCAAGAGACACTGCATTGAGTCCAGGCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATTCGGGGTTGGAGAGCTaGGCACGATTGATGTTGATA +
Preference number: 4 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDSGLES*ARLMLI
Trigger: TATCAACATCAATCGTGCCCAGCTCTCCAACCCCGA...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTAGACAAAGTCCACAGATaGAAACTTCTTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVLSPALIMVLATVSCPLDKVHR*KLLPCL
Trigger: GAGACAGGGAAGAAGTTTGCATCTGTGGACTTTGTC...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AGACTAAACGCTAGCACAGTCATGCAGGTCCACAGCTCTGCACCCAAAGCTCGGTTGTTGGTGCAAACATaGCGGTATTTGCACCAATGG +
Preference number: 4 (lower is better)
Translates to: RLNASTVMQVHSSAPKARLLVQT*RYLHQW
Trigger: CCATTGGTGCAAATACCGCCATGTTTGCACCAACAA...CCGAGCTTTGGGTGCAGAGCTGTGGACCTGCATGACTGTGCTAGCGTTTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCGCGCCCGGCACACCATaGTGGTGTCATTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPAPGTP*WCHCTP
Trigger: TGGTGTACAATGACACCACCATGGTGTGCCGGGCGC...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp AACCCTTTGCAGGATACCACAGAGATGGATGGCTCTAGAAGACCAAGGACAAGCTGTCTAGCTGCAGGGTaGGGTAGTATACGAACTGCT +
Preference number: 4 (lower is better)
Translates to: NPLQDTTEMDGSRRPRTSCLAAG*GSIRTA
Trigger: AGCAGTTCGTATACTACCTCACCCTGCAGCTAGACA...GCTTGTCCTTGGTCTTCTAGAGCCATCCATCTCTGTGGTATCCTGCAAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCCCTCAAAGGAGCAGTTaGCACCAGCTGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPPQRSS*HQLRGQ
Trigger: CTGACCTCTCAGCTGGTGTCAACTGCTCCTTTGAGG...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATACGCTCTCCACAGGGCTaGAAAGCACCTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYIRSPQG*KAPCPR
Trigger: ACGTGGGCAAGGTGCTTTGCAGCCCTGTGGAGAGCG...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp AACCCTTTGCAGGATACCACAGAGATGGATGGCTCTAGAAGACCAAGGACAAGCGGCGACTGGACAGAGTaGGGAAGTATTCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: NPLQDTTEMDGSRRPRTSGDWTE*GSILIC
Trigger: GCAAATCAGAATACTTCCCCACTCTGTCCAGTCGCC...GCTTGTCCTTGGTCTTCTAGAGCCATCCATCTCTGTGGTATCCTGCAAAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp CTCTCTTCCACCTGGGTTCCTCCTGAATTGCCTTTCCGTGTCTCTTCCCTCAAATCCTTCAGTACAGGATaGTCCTCAATCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LSSTWVPPELPFRVSSLKSFSTG*SSIPGN
Trigger: GTTTCCTGGGATTGAGGACCATCCTGTACTGAAGGA...TTTGAGGGAAGAGACACGGAAAGGCAATTCAGGAGGAACCCAGGTGGAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATACGGTCGCCTTCACGTTaGTCCAGGTGGTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYIRSPSR*SRWSWF
Trigger: GAACCACGACCACCTGGACCAACGTGAAGGCGACCG...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATACTTTCCACAGGCACCTaGGTCACCTGCTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYILSTGT*VTCFSV
Trigger: GACGGAGAAGCAGGTGACGCAGGTGCCTGTGGAAAG...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp TGCGATAGGAGCAGGAGGCGGGGAATAAATAACGGGAACATGCACTCTGACTGGAAGGTTAGCAGGAAATaGTTCTTGGTCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: CDRSRRRGINNGNMHSDWKVSRK*FLVNSC
Trigger: ACAGCTGTTGACCAAGAAGCATTTCCTGCTAACCTT...CCAGTCAGAGTGCATGTTCCCGTTATTTATTCCCCGCCTCCTGCTCCTATCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCTGGGCCTGGATGTTCTaGGGGTTGTCAATGACAAAG +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPWAWMF*GLSMTK
Trigger: CTTTGTCATTGACAACCCCCAGAACATCCAGGCCCA...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACAACAGGAGCTTGGGGTaGTTCTTGCTTTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDNRSLG*FLLSRF
Trigger: AAACCTAGAAAGCAAGAACCACCCCAAGCTCCTGTT...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACTCTCGTCCTTGTACTTaGCGATGTAGGAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDSRPCT*RCRSRS
Trigger: AGATCTACTCCTACATCGCCAAGTACAAGGACGAGA...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATATGCTCTCAGTCTCCGTaGAGTCCTCAAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYICSQSP*SPQRSS
Trigger: ACTGCTCCTTTGAGGACTTCACGGAGACTGAGAGCA...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCGGAAGTATTCTGATTTaGCATCGATGGGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPGSILI*HRWVCP
Trigger: TGGGCACACCCATCGATGGCAAATCAGAATACTTCC...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATACTGCCAGCATTCAGATaGCTCCCTTCGATGCCAATC +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYILPAFR*LPSMPI
Trigger: GATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAG...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATATCTTTGCCCAGCTTGTaGTCTGATGTAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYISLPSL*SDVEQE
Trigger: CTCCTGCTCTACATCAGAGCACAAGCTGGGCAAAGA...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR TCA 90 bp CCTCAAATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATACAAAAGGAAGGTaGACCAGTTGGTCAACATCT +
Preference number: 4 (lower is better)
Translates to: PQIIVQHPIGARATHTYIYTKGR*TSWSTS
Trigger: AGATGTTGACCAACTGGTTCACCTTCCTTTTGTATA...TATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp CCTCAAATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATAAGGACTGGTGAACACTaGAGTTATAGAAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: PQIIVQHPIGARATHTYIRTGEH*SYRRQS
Trigger: ACTTTGTCTTCTATAACTGCAGTGTTCACCAGTCCT...TATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR GCA 90 bp ATAATTGTACAGCACCCCATTGGGGCCAGGGCCACACACACATATATATATATATGGTTCTTCACCAGGTaGCACAGTTTTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: IIVQHPIGARATHTYIYIWFFTR*HSFVPL
Trigger: AAGTGGAACAAAACTGTGGCACCTGGTGAAGAACCA...TATATATATATATGTGTGTGTGGCCCTGGCCCCAATGGGGTGCTGTACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp CGGGCCGGGCTGCCTGGGATGTGGAAAAGGCACTCGTACCCTCGCTaGCCCGACTGTGGCTGCGGCAGGTTCCGTGCAGCCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RAGLPGMWKRHSYPR*PDCGCGRFRAARVM
Trigger: CATCACCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGCCTTTTCCACATCCCAGGCAGCCCGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp CCAGGGCCGGCCTGCCGCTGGGGTTTGCAAGGTCCACCAGAATCTTaGGGATGCGGCCGCTGCGAGTGCCAGCAAAAACCACGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: PGPACRWGLQGPPES*GCGRCECQQKPRCG
Trigger: GCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACGCCAGGCCCAGCTGTTaGGCCAGGGCCTGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDARPSC*ARACPG
Trigger: GCCGGGACAGGCCCTGGCCAAACAGCTGGGCCTGGC...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp TGCCCACGAAGAGCTTGGCCTGGCCCTGGCCGGGTGGCCCAGCAATaGGCACTCCCGCCATGCTGCCAGCCTCTCGAACACTGGACAGGT +
Preference number: 5 (lower is better)
Translates to: CPRRAWPGPGRVAQQ*ALPPCCQPLEHWTG
Trigger: ACCTGTCCAGTGTTCGAGAGGCTGGCAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp ATCGATGGGTGTGCCCACGAAGAGCTTGGCCTGGCCCTGGCCGGGTaGCCCAGCAATGAGCACTCCCGCCATGCTGCCAGCCTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: IDGCAHEELGLALAG*PSNEHSRHAASLSN
Trigger: GTTCGAGAGGCTGGCAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp GATTTGCCATCGATGGGTGTGCCCACGAAGAGCTTGGCCTGGCCCTaGCCGGGTGGCCCAGCAATGAGCACTCCCGCCATGCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: DLPSMGVPTKSLAWP*PGGPAMSTPAMLPA
Trigger: GGCTGGCAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 90 bp TGTGCAGCGGCTGCTGCCATGGTGGGCATGCATCCAGGAGGCTGGTaGGTCAGCTGGGCAGTGGTGACGAAGGGAACAGCGGCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CAAAAAMVGMHPGGW*VSWAVVTKGTAALS
Trigger: GCTGAGCGCCGCTGTTCCCTTCGTCACCACTGCCCAGCTGACTCACCAGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp CCGGCCTGCCGCTGGGGTTTGCAAGGTCCACCAGAATCTTGCGGATaGGGCCGCTGCGAGTGCCAGCAAAAACCACGGTGCGGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PACRWGLQGPPESCG*GRCECQQKPRCGLG
Trigger: ACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCCAGGGGAAGGAGCCGTaGACACATGCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCQGKEP*THARQD
Trigger: GTCCTGCCTGGCATGTGTCAACGGCTCCTTCCCCTG...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCGGGCTGCAAAGCACCTaGCCCACGTGCACGCCTAGC +
Preference number: 5 (lower is better)
Translates to: IPGQNQPRCAILAPRQQAGLQST*PTCTPS
Trigger: GCTAGGCGTGCACGTGGGCAAGGTGCTTTGCAGCCC...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGCGGACAGTGGCCAGGTaGGTGCCCGTGACTGTTAGG +
Preference number: 5 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRRTVAR*VPVTVR
Trigger: CCTAACAGTCACGGGCACCAACCTGGCCACTGTCCG...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp TGGTGGGCATGCATCCAGGAGGCTGGTGAGTCAGCTGGGCAGTGGTaGCGAAGGGAACAGCGGCGCTCAGCTACGCACCAGCCGCACTCA +
Preference number: 5 (lower is better)
Translates to: WWACIQEAGESAGQW*RREQRRSATHQPHS
Trigger: TGAGTGCGGCTGGTGCGTAGCTGAGCGCCGCTGTTCCCTTCGTCACCACTGCCCAGCTGACTCACCAGCCTCCTGGATGCATGCCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 90 bp CGGCAGTGTCAGCAGGCTGTCCGAATACACCTGCAGCATCCCAGGTaGGAACTCGAAGCCCCCGGCCCGCACCGTGACTTTGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RQCQQAVRIHLQHPR*ELEAPGPHRDFVLP
Trigger: GGGCAGCACAAAGTCACGGTGCGGGCCGGGGGCTTCGAGTTCTCACCTGGGATGCTGCAGGTGTATTCGGACAGCCTGCTGACACTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp AGCCACCACACTTTCATAAGCCAGGGCCGGCCTGCCGCTGGGGTTTaGAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTGCGAGTGCC +
Preference number: 5 (lower is better)
Translates to: SHHTFISQGRPAAGV*KVHQNLADAAAASA
Trigger: GGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp CCTCCTGAGCCACCACACTTTCATAAGCCAGGGCCGGCCTGCCGCTaGGGTTTGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PPEPPHFHKPGPACR*GLQGPPESCGCGRC
Trigger: GCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCTCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp GCCTGGGATGTGGAAAAGGCACTCGTACCCTCGCTGACCCGACTGTaGCTGCGGCAGGTTCCGTGCAGCCAGGGTGATGGGCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: AWDVEKALVPSLTRL*LRQVPCSQGDGLHH
Trigger: GTGGTGAAGCCCATCACCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGCCTTTTCCACATCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp GGTTGCCCTCCTGAGCCACCACACTTTCATAAGCCAGGGCCGGCCTaGCGCTGGGGTTTGCAAGGTCCACCAGAATCTTGCGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: GCPPEPPHFHKPGPA*RWGLQGPPESCGCG
Trigger: GCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCTCAGGAGGGCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp GCACTCGTACCCTCGCTGACCCGACTGTGGCTGCGGCAGGTTCCGTaGAGCCAGGGTGATGGGCTTCACCACACCCACTGGCACATAGAT +
Preference number: 5 (lower is better)
Translates to: ALVPSLTRLWLRQVP*SQGDGLHHTHWHID
Trigger: ATCTATGTGCCAGTGGGTGTGGTGAAGCCCATCACCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp GGGGACAGCTTGAGAATCTTGGGGTCTGTGCAGCGGCTGCTGCCATaGTGGGCATGCATCCAGGAGGCTGGTGAGTCAGCTGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GDSLRILGSVQRLLP*WACIQEAGESAGQW
Trigger: CCACTGCCCAGCTGACTCACCAGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAAGATTCTCAAGCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCTCAGCATCTTCCTCGTaGGCCATGAGCCGGCGACTG +
Preference number: 5 (lower is better)
Translates to: IPGQNQPRCAILAPRQQASASSS*AMSRRL
Trigger: CAGTCGCCGGCTCATGGCCAACGAGGAAGATGCTGA...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp AGGTGCGGAAGGCAGGTTGTGGACCCAAACCAGCTGGGGGCGAGCTaGTGGCTATCCACACACCCCTCAGCAGCAGCAAGAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RCGRQVVDPNQLGAS*WLSTHPSAAARAAA
Trigger: TGCTGCTGCTCTTGCTGCTGCTGAGGGGTGTGTGGATAGCCATCAGCTCGCCCCCAGCTGGTTTGGGTCCACAACCTGCCTTCCGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 90 bp TTAGTCGAGTCCCTCCCTGCCGAGGGCCTGTCTCTGGGGACAGCTTaGGAATCTTGGGGTCTGTGCAGCGGCTGCTGCCATGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LVESLPAEGLSLGTA*ESWGLCSGCCHGGH
Trigger: ATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAAGATTCTCAAGCTGTCCCCAGAGACAGGCCCTCGGCAGGGAGGGACTCGACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp AGTGAGGCCCCAGTCACTGGCCACAAAGGTGCGGAAGGCAGGTTGTaGACCCAAACCAGCTGGGGGCGAGCTGATGGCTATCCACACACC +
Preference number: 5 (lower is better)
Translates to: SEAPVTGHKGAEGRL*TQTSWGRADGYPHT
Trigger: GGTGTGTGGATAGCCATCAGCTCGCCCCCAGCTGGTTTGGGTCCACAACCTGCCTTCCGCACCTTTGTGGCCAGTGACTGGGGCCTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp TATTCTGATTTGCCATCGATGGGTGTGCCCACGAAGAGCTTGGCCTaGCCCTGGCCGGGTGGCCCAGCAATGAGCACTCCCGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: YSDLPSMGVPTKSLA*PWPGGPAMSTPAML
Trigger: CAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAATCAGAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TGGCAAGCACAGGGTGCTAGAGTAGAGGCTGGTGGGACAGCCCCAGGCTGTGACATCTGCAGGGGCGAGTaGATGCAGCCCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WQAQGARVEAGGTAPGCDICRGE*MQPSSL
Trigger: CAAGGAGCTGGGCTGCATCAACTCGCCCCTGCAGAT...GTCACAGCCTGGGGCTGTCCCACCAGCCTCTACTCTAGCACCCTGTGCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACGACAGCTTGAGAATCTaGGGGTCTGTGCAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHDSLRI*GSVQRL
Trigger: CAGCCGCTGCACAGACCCCAAGATTCTCAAGCTGTC...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CACGGCAGCAAGCCCCAGGCACAGAGGCGGCTCAGCAGGAACCCTTACATCCACACCACCTGCTCCAGTTaGCTTCGAAGCCGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: HGSKPQAQRRLSRNPYIHTTCSS*LRSRCL
Trigger: AAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGGT...GTGGATGTAAGGGTTCCTGCTGAGCCGCCTCTGTGCCTGGGGCTTGCTGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp GTCTCCCTGACCCTGTGTGATGGGCGCCACTTCCCGGGCAGAAGGTaGGTGGCAATGGATGCGGCCATCTTCCAGGATGCTCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: VSLTLCDGRHFPGRR*VAMDAAIFQDALSL
Trigger: GAGACTGAGAGCATCCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACAGGGTCAGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
ENSMUST00000205121.2
CDS GCA 90 bp TTGGGGTCATTCACGCACAGCCGCACAATCTTGGAGGTGAAGAAGTaGTCGCCAGCGGCGTCGGGCGAGGTAAGCTGCGTGTCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGSFTHSRTILEVKK*SPAASGEVSCVSSC
Trigger: GCAGCTAGACACGCAGCTTACCTCGCCCGACGCCGCTGGCGAGCACTTCTTCACCTCCAAGATTGTGCGGCTGTGCGTGAATGACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp CGCTGGGGTTTGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTaGGAGTGCCAGCAAAAACCACGGTGCGGCCTTGGTAGTCATAGG +
Preference number: 5 (lower is better)
Translates to: RWGLQGPPESCGCGR*ECQQKPRCGLGSHR
Trigger: CCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp CTGCACACACTGCAGCAGGTCAGAGGCAAAACGCTGGGGCTCTTCTaGCCGCTCACAGGCATCCTGCCTAGAGCAGATGCTGTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LHTLQQVRGKTLGLF*PLTGILPRADAVQD
Trigger: GTCCTGCACAGCATCTGCTCTAGGCAGGATGCCTGTGAGCGGGCAGAAGAGCCCCAGCGTTTTGCCTCTGACCTGCTGCAGTGTGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp CAGTGGGGGTCCCGAGACCCCAGGCACAGCTCACAGGAAGTATACTaGACACAGCTTTCCACAGGCACCTGCGTCACCTGCTTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: QWGSRDPRHSSQEVY*TQLSTGTCVTCFSV
Trigger: GACGGAGAAGCAGGTGACGCAGGTGCCTGTGGAAAGCTGTGTCCAGTATACTTCCTGTGAGCTGTGCCTGGGGTCTCGGGACCCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp CCCTGTGTGATGGGCGCCACTTCCCGGGCAGAAGGTGAGTGGCAATaGATGCGGCCATCTTCCAGGATGCTCTCAGTCTCCGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PCVMGATSRAEGEWQ*MRPSSRMLSVSVKS
Trigger: GGACTTCACGGAGACTGAGAGCATCCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
ENSMUST00000205121.2
CDS CCA 90 bp CGGCAGGTTCCGTGCAGCCAGGGTGATGGGCTTCACCACACCCACTaGCACATAGATGTGGGTAGAAGGCAGGATCTGTGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: RQVPCSQGDGLHHTH*HIDVGRRQDLWAVL
Trigger: GAGGACTGCCCACAGATCCTGCCTTCTACCCACATCTATGTGCCAGTGGGTGTGGTGAAGCCCATCACCCTGGCTGCACGGAACCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTGCCCGCACCGTGACTTaGTGCTGCCCCGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPARTVT*CCPVRL
Trigger: CAACCTCACGGGGCAGCACAAAGTCACGGTGCGGGC...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CTTGGCCGCGCAGAGCACGCGGTGAATCTGAGGGTGGTGGCAAGCACAGGGTGCTTTTGTAGTGTTCCCTaGGTGGCCAGCAGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LGRAEHAVNLRVVASTGCFCSVP*VASSLV
Trigger: AACCAGGCTGCTGGCCACCAAGGGAACACTACAAAA...GCACCCTGTGCTTGCCACCACCCTCAGATTCACCGCGTGCTCTGCGCGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS GCA 90 bp GTGCCCTCGATGGTGACCGTGCCACCCAGTGGCTGGTTGAAATCCTaGCCGCAGAAGTCGTCATCAATCTGCAGGGGCGAGTTGATGCAG +
Preference number: 5 (lower is better)
Translates to: VPSMVTVPPSGWLKS*PQKSSSICRGELMQ
Trigger: CTGCATCAACTCGCCCCTGCAGATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp GAATCTTGCGGATGCGGCCGCTGCGAGTGCCAGCAAAAACCACGGTaGGGCCTTGGTAGTCATAGGCAGCCACAGCAGTCAGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: ESCGCGRCECQQKPR*GLGSHRQPQQSGHL
Trigger: AAGATGGCCTGACTGCTGTGGCTGCCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp GGTTTGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTGCGAGTaGCAGCAAAAACCACGGTGCGGCCTTGGTAGTCATAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLQGPPESCGCGRCE*QQKPRCGLGSHRQP
Trigger: TGGCTGCCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp GGCCCGCAGCGTGCTGGCATCTCCAATCTCGCAGACAATCTGTTCTaGGCTGATGTACTCGCTCTCCACAGGGCTGCAAAGCACCTTGCC +
Preference number: 5 (lower is better)
Translates to: GPQRAGISNLADNLF*ADVLALHRAAKHLA
Trigger: GGCAAGGTGCTTTGCAGCCCTGTGGAGAGCGAGTACATCAGCGCAGAACAGATTGTCTGCGAGATTGGAGATGCCAGCACGCTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp AACAGGCACAGCGCCGACTCCTTGGGTGGCTTCACGCGGTTCTTCTaGCCCTGTGCGAACACAGTGAACAACACCTCCTCATCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: NRHSADSLGGFTRFF*PCANTVNNTSSSSA
Trigger: GGCTGAGGATGAGGAGGTGTTGTTCACTGTGTTCGCACAGGGCCAGAAGAACCGCGTGAAGCCACCCAAGGAGTCGGCGCTGTGCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp AGACTGGAAGCCACCGGGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACATGCAGCCCAGCTCCTaGTTGAGCAGCCAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLEATGNIRGGEDKGWWDMQPSS*LSSQGR
Trigger: CCTGCCTTGGCTGCTCAACAAGGAGCTGGGCTGCAT...GTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCCCGGTGGCTTCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp ATCCCTGGGCAGAACCAGCCACGCTGTGCTATCCTTGCCCCACGGCAGCAAGCCCCAGGTGCCACAGTTTaGTTCCACTTTCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: IPGQNQPRCAILAPRQQAPGATV*FHFPGL
Trigger: CAGACCTGGAAAGTGGAACAAAACTGTGGCACCTGG...GGCTTGCTGCCGTGGGGCAAGGATAGCACAGCGTGGCTGGTTCTGCCCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGGGCACGGAATCGTGGGCAGCGGCTTCTTCCATCTGGGGGAAGTAGAGGCCACGAGTCTTTGCCCAGCTaGTGCTCTGATGTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GARNRGQRLLPSGGSRGHESLPS*CSDVEQ
Trigger: CTGCTCTACATCAGAGCACAAGCTGGGCAAAGACTC...GTGGCCTCTACTTCCCCCAGATGGAAGAAGCCGCTGCCCACGATTCCGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS GCA 90 bp TGGACACAGCTACATCACTGCCAGCATTCAGATGGCTCCCTTCGATaGCAATCCAGGTACCTCCAGACAGAGGCCCACGGGAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: WTQLHHCQHSDGSLR*QSRYLQTEAHGRGS
Trigger: TGAGCCCCTCCCGTGGGCCTCTGTCTGGAGGTACCTGGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp TGGGCACGATTGATGTTGATAACAATAGGGGCGCTGCCAGGAGTGTaGCCGGGCGGTGTCAGGCAGCGGATCTCTCGTGAGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: WARLMLITIGALPGV*PGGVRQRISREFLQ
Trigger: CTGGAGAAACTCACGAGAGATCCGCTGCCTGACACCGCCCGGGCACACTCCTGGCAGCGCCCCTATTGTTATCAACATCAATCGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp AGCACGAGCGGCACCTGGGACATGGTGACTGACACATTGCGCGGCTaGACAGTTAACTGCACACACTGCAGCAGGTCAGAGGCAAAACGC +
Preference number: 5 (lower is better)
Translates to: STSGTWDMVTDTLRG*TVNCTHCSRSEAKR
Trigger: GCGTTTTGCCTCTGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGCCGCTCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp GGCCGACCGCCAATGGACACAGCTACATCACTGCCAGCATTCAGATaGCTCCCTTCGATGCCAATCCAGGTACCTCCAGACAGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRPPMDTATSLPAFR*LPSMPIQVPPDRGP
Trigger: TGGGCCTCTGTCTGGAGGTACCTGGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGGCGGTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTTGCGGCTCGCCCAGCTaGAAGAGATCGTCCAACCTC +
Preference number: 5 (lower is better)
Translates to: HLGEVEATSDGSSRALGFCGSPS*KRSSNL
Trigger: GAGGTTGGACGATCTCTTCAAGCTGGGCGAGCCGCA...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGACACAGCGCCGACTCCTaGGGTGGCTTCACGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGHSADS*GGFTRF
Trigger: GAACCGCGTGAAGCCACCCAAGGAGTCGGCGCTGTG...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGCCAGGACCCAACCACAGCCCCCACACCTGGACTTGGTACAGGTGGGCCAAGGTGGATGTTCTGGGGGTaGTCAATGACAAAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: GQDPTTAPTPGLGTGGPRWMFWG*SMTKLP
Trigger: TGGCAACTTTGTCATTGACAACCCCCAGAACATCCA...CCTTGGCCCACCTGTACCAAGTCCAGGTGTGGGGGCTGTGGTTGGGTCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTACGGTCGCCTTCACGTaGGTCCAGGTGGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPTVAFT*VQVVVV
Trigger: AACCACGACCACCTGGACCAACGTGAAGGCGACCGT...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCCGCAGAGGCAGGCAATaGCTCTTCCAGGTATGGCGC +
Preference number: 5 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLRRGRQ*LFQVWR
Trigger: GCGCCATACCTGGAAGAGCAATTGCCTGCCTCTGCG...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCAGCTGCTCAGGGCCATaGTGTCCACCACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLSCSGP*CPPPAP
Trigger: TGGAGCAGGTGGTGGACACAATGGCCCTGAGCAGCT...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS GCA 90 bp ATGGTGACTGACACATTGCGCGGCTGGACAGTTAACTGCACACACTaGAGCAGGTCAGAGGCAAAACGCTGGGGCTCTTCTGCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: MVTDTLRGWTVNCTH*SRSEAKRWGSSARS
Trigger: TGAGCGGGCAGAAGAGCCCCAGCGTTTTGCCTCTGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp AGGAGAAGGAGCAGGGCCGACCGCCAATGGACACAGCTACATCACTaGCAGCATTCAGATGGCTCCCTTCGATGCCAATCCAGGTACCTC +
Preference number: 5 (lower is better)
Translates to: RRRSRADRQWTQLHH*QHSDGSLRCQSRYL
Trigger: GAGGTACCTGGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGGCGGTCGGCCCTGCTCCTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp GTCGACAAAAAGGGGTGTGCCCTCGATGGTGACCGTGCCACCCAGTaGCTGGTTGAAATCCTGCCCGCAGAAGTCGTCATCAATCTGCAG +
Preference number: 5 (lower is better)
Translates to: VDKKGCALDGDRATQ*LVEILPAEVVINLQ
Trigger: CTGCAGATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAGGGCACACCCCTTTTTGTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGACAGCCCAGCTCCTTGTaGAGCAGCCAAGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGQPSSL*SSQGRE
Trigger: CTCCCTGCCTTGGCTGCTCAACAAGGAGCTGGGCTG...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp AGGCCAACAGGCGGTTGGCTGCATAGTCCAGCAGTAGAAGCTTGTTaGCGTTGTCTGTGCTGCCCAGACCATGTGGGCAGGACTGTACAC +
Preference number: 5 (lower is better)
Translates to: RPTGGWLHSPAVEAC*RCLCCPDHVGRTVH
Trigger: GTGTACAGTCCTGCCCACATGGTCTGGGCAGCACAGACAACGTCAACAAGCTTCTACTGCTGGACTATGCAGCCAACCGCCTGTTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp ACCTGGGACATGGTGACTGACACATTGCGCGGCTGGACAGTTAACTaGACACACTGCAGCAGGTCAGAGGCAAAACGCTGGGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TWDMVTDTLRGWTVN*THCSRSEAKRWGSS
Trigger: AGAAGAGCCCCAGCGTTTTGCCTCTGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 90 bp AGGGCCATTGTGTCCACCACCTGCTCCAGTTTGCTTCGAAGCCGCTaGCTTCGAGCCTGTTCATCTTTCTCCAGAGCCACCAGAATCTCG +
Preference number: 5 (lower is better)
Translates to: RAIVSTTCSSLLRSR*LRACSSFSRATRIS
Trigger: CGAGATTCTGGTGGCTCTGGAGAAAGATGAACAGGCTCGAAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGGTGGACACAATGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp CACCACACCCACTGGCACATAGATGTGGGTAGAAGGCAGGATCTGTaGGCAGTCCTCAGACATGTTGACTCGGCCTTCCAGAAAGGCGCA +
Preference number: 5 (lower is better)
Translates to: HHTHWHIDVGRRQDL*AVLRHVDSAFQKGA
Trigger: TGCGCCTTTCTGGAAGGCCGAGTCAACATGTCTGAGGACTGCCCACAGATCCTGCCTTCTACCCACATCTATGTGCCAGTGGGTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp TCTCTCGTGAGTTTCTCCAGGAGAAGGAGCAGGGCCGACCGCCAATaGACACAGCTACATCACTGCCAGCATTCAGATGGCTCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: SLVSFSRRRSRADRQ*TQLHHCQHSDGSLR
Trigger: TCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGGCGGTCGGCCCTGCTCCTTCTCCTGGAGAAACTCACGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CATCTGGGGGAAGTAGAGGCCACATCAGATGGCAGCTCCAGGGCCCTTGGTTTTCACAGCCGCACAATCTaGGAGGTGAAGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: HLGEVEATSDGSSRALGFHSRTI*EVKKCS
Trigger: CGAGCACTTCTTCACCTCCAAGATTGTGCGGCTGTG...AAAACCAAGGGCCCTGGAGCTGCCATCTGATGTGGCCTCTACTTCCCCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAACCACCCAGTGGCTGGTaGAAATCCTGCCCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKPPSGW*KSCPQK
Trigger: CTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGG...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAAAGGAAGGAGGAGCTGTaGAGTACCAGCAGCGTGCGC +
Preference number: 5 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKRKEEL*STSSVR
Trigger: GCGCACGCTGCTGGTACTCAACAGCTCCTCCTTCCT...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAAACCCGTGACTCCAGGTaGTCCATCTGGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKTRDSR*SIWSCS
Trigger: GCTGCAGCTCCAGATGGACAACCTGGAGTCACGGGT...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS CCA 90 bp CATTGTACACCATGCAGCTATTTTCCCTCTCAATGCCTCCATACTTaGCGCGGATTCGAGGTTCACGGACAGTGGCCAGGTTGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: HCTPCSYFPSQCLHT*RGFEVHGQWPGWCP
Trigger: CGGGCACCAACCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGGTGTACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 90 bp TACCAGCAGCGTGCGCACATTGTCCATGATGAAACCAATCTCATCTaGCCGCTCTCCCAGTTCTGGCGGGCTGCGCTTTGGGTTGTCTAT +
Preference number: 5 (lower is better)
Translates to: YQQRAHIVHDETNLI*PLSQFWRAALWVVY
Trigger: ATAGACAACCCAAAGCGCAGCCCGCCAGAACTGGGAGAGCGGCCAGATGAGATTGGTTTCATCATGGACAATGTGCGCACGCTGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGATACTTCACCTCGGGGTaGGAGAGCTGGGCACGATTG +
Preference number: 5 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGYFTSG*ESWARL
Trigger: CAATCGTGCCCAGCTCTCCAACCCCGAGGTGAAGTA...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGATGTCAGAGCCCAGTCCAGAGGGTCCCACCACTATaGATGCTCCACTCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: EMDGSRRPRTSRCQSPVQRVPPL*MLHSGS
Trigger: CGACCCTGAGTGGAGCATCAATAGTGGTGGGACCCT...CTGGACTGGGCTCTGACATCTGCTTGTCCTTGGTCTTCTAGAGCCATCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGATGTCAGAGCCCAGTCCAGTCCAGGAGCTTCTCCTaGACCTGGGTCACGGTGTCA +
Preference number: 5 (lower is better)
Translates to: EMDGSRRPRTSRCQSPVQSRSFS*TWVTVS
Trigger: TGACACCGTGACCCAGGTCAAGGAGAAGCTCCTGGA...CTGGACTGGGCTCTGACATCTGCTTGTCCTTGGTCTTCTAGAGCCATCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTTCCACGGTAGCAGGATaGGATGCGCTCCTTGATTTT +
Preference number: 5 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPSTVAG*DALLDF
Trigger: AAAATCAAGGAGCGCATCCAATCCTGCTACCGTGGA...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGTGTGCTGTCCCCAGCACTGATAATGGTCCTGGCCACAGTTAGCTGTCCCTTACAGTCAGCCGCATTGTaGGTGCAAACATGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: GVLSPALIMVLATVSCPLQSAAL*VQTWRY
Trigger: ATACCGCCATGTTTGCACCAACAATGCGGCTGACTG...TAAGGGACAGCTAACTGTGGCCAGGACCATTATCAGTGCTGGGGACAGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGAGTCTCTGGGGACAGCTaGAGAATCTTGGGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGVSGDS*RILGSV
Trigger: CACAGACCCCAAGATTCTCAAGCTGTCCCCAGAGAC...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GCCGCTTCCAGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGAGCAGGAAATGCTTCTaGGTCAACAGCTGTCCGAAC +
Preference number: 5 (lower is better)
Translates to: AASREAMAEAWSTQTIQMSRKCF*VNSCPN
Trigger: GTTCGGACAGCTGTTGACCAAGAAGCATTTCCTGCT...CATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCTGGAAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCTCACCTCTCCCTCAGACTCTGCCTGCTGGTAGCAGCTGAAGAAGCCAAGAAAATCTCAGAGACCATCTaGCTGCCACGGTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SHLSLRLCLLVAAEEAKKISETI*LPRSPS
Trigger: TGAAGGCGACCGTGGCAGCAAGATGGTCTCTGAGAT...TTTCTTGGCTTCTTCAGCTGCTACCAGCAGGCAGAGTCTGAGGGAGAGGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp CTGGGCACTTGTAGAGGTGGGCCTGGATGTTCTGGGGGTTGTCAATaGCAAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LGTCRGGPGCSGGCQ*QSCHSTQPTGSQAD
Trigger: ATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTGTCATTGACAACCCCCAGAACATCCAGGCCCACCTCTACAAGTGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGAACATCAGGGGAGGGGAGGATAAAGGATGGTGGGACGGTGGCCTGTTATCCTTCCTTGATTTTCTCCTaGATGGCCCTCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: GTSGEGRIKDGGTVACYPSLIFS*MALSVN
Trigger: GTTCACACTGAGGGCCATCAAGGAGAAAATCAAGGA...AGGATAACAGGCCACCGTCCCACCATCCTTTATCCTCCCCTCCCCTGATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp TCAGCAGGAACCCTTACATCCACAGCGATAAGAATTGGCCCTGCATGGCAGGGACAAACATGGCGGTATTaGCACCAATGGCAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SAGTLTSTAIRIGPAWQGQTWRY*HQWQGK
Trigger: CTTCCCCTGCCATTGGTGCAAATACCGCCATGTTTG...TCCCTGCCATGCAGGGCCAATTCTTATCGCTGTGGATGTAAGGGTTCCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGATGTCAGAGCCCAGTCCAGTCAATGCCTCCATACTaGGCGCGGATTCGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: EMDGSRRPRTSRCQSPVQSMPPY*ARIRGS
Trigger: TGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGA...CTGGACTGGGCTCTGACATCTGCTTGTCCTTGGTCTTCTAGAGCCATCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATCTCCGTAACAGGAGCTaGGGGTGGTTCTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDLRNRS*GWFLLS
Trigger: AGAAAGCAAGAACCACCCCAAGCTCCTGTTACGGAG...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS TCA 90 bp CCTGGTACACAAAGCCAAACATGTCAGCATCTTCCTCGTTGGCCATaGGCCGGCGACTGGACAGAGTGGGGAAGTATTCTGATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: PGTQSQTCQHLPRWP*AGDWTEWGSILICH
Trigger: ATGGCAAATCAGAATACTTCCCCACTCTGTCCAGTCGCCGGCTCATGGCCAACGAGGAAGATGCTGACATGTTTGGCTTTGTGTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 90 bp CAAAGTTGCCATTCCACACAACCGACAGGTTCACAGGCAGATCGCTaGCATCATTCCCCTCATAGGAGTACGAGGAGTTCTGGCACTGCA +
Preference number: 5 (lower is better)
Translates to: QSCHSTQPTGSQADR*HHSPHRSTRSSGTA
Trigger: TGCAGTGCCAGAACTCCTCGTACTCCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCAACCACGGTGCGGCCTaGGTAGTCATAGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPNHGAA*VVIGSH
Trigger: GTGGCTGCCTATGACTACCAAGGCCGCACCGTGGTT...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CTAAAGTGCTTGCGAACAAACACCCTGGGAAGCTGCTCCAGGCCACCTCACCTCTTGTCAATGACAAAGTaGCCATTCCACACAACCGAC +
Preference number: 5 (lower is better)
Translates to: LKCLRTNTLGSCSRPPHLLSMTK*PFHTTD
Trigger: GTCGGTTGTGTGGAATGGCAACTTTGTCATTGACAA...GAGGTGAGGTGGCCTGGAGCAGCTTCCCAGGGTGTTTGTTCGCAAGCACTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp AACCCTTTGCAGGATACCACAGAGATGGATGGCTCTAGAAGACCAAGGACAAGCAGCAGTAGAAGCTTGTaGACGTTGTCTGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: NPLQDTTEMDGSRRPRTSSSRSL*TLSVLP
Trigger: GGGCAGCACAGACAACGTCAACAAGCTTCTACTGCT...GCTTGTCCTTGGTCTTCTAGAGCCATCCATCTCTGTGGTATCCTGCAAAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CATACATATATATATGTACAGGGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGTGCCCACGAAGAGCTaGGCCTGGCCCTGGCCGGGT +
Preference number: 5 (lower is better)
Translates to: HTYIYVQGPLKTYCCSLRVPTKS*AWPWPG
Trigger: ACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCAC...CCTCAAGGAGCAACAGTACGTTTTTAATGGACCCTGTACATATATATATGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGTCCATTAAAAACGTACTGTTGCTCCTTGAGGGCAGAGGTGGACACAGTTGACGTCAGGCCATCTTCCTaGTCGACAAAAAGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GPLKTYCCSLRAEVDTVDVRPSS*STKRGV
Trigger: CACACCCCTTTTTGTCGACAAGGAAGATGGCCTGAC...GTCAACTGTGTCCACCTCTGCCCTCAAGGAGCAACAGTACGTTTTTAATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp AGAGAAGCAATGGCCGAGGCCTGGTCTACTCAGACCATCCAAATGACCAGGGATACCATGGTGGTGTCATaGTACACCATGCAGCTATTT +
Preference number: 5 (lower is better)
Translates to: REAMAEAWSTQTIQMTRDTMVVS*YTMQLF
Trigger: AAATAGCTGCATGGTGTACAATGACACCACCATGGT...ATCCCTGGTCATTTGGATGGTCTGAGTAGACCAGGCCTCGGCCATTGCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCGGGAAGTATTCTGATTaGCCATCGATGGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPGKYSD*PSMGVP
Trigger: GGGCACACCCATCGATGGCAAATCAGAATACTTCCC...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp GGGCAAAATACCACAGGATTTCTTGTTCCCTTAAAAGCAGTACCCAGATGTCCCGATTGGATGCGCTCCTaGATTTTCTCCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GQNTTGFLVPLKAVPRCPDWMRS*IFSLMA
Trigger: GGCCATCAAGGAGAAAATCAAGGAGCGCATCCAATC...GGGACATCTGGGTACTGCTTTTAAGGGAACAAGAAATCCTGTGGTATTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS-3UTR CAA 90 bp CATACATATATATATGTACAGGGTCCATTAAAAACGTACTGTTGCTCCTTGAGGTCCAGCAGTAGAAGCTaGTTGACGTTGTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: HTYIYVQGPLKTYCCSLRSSSRS*LTLSVL
Trigger: CAGCACAGACAACGTCAACAAGCTTCTACTGCTGGA...CCTCAAGGAGCAACAGTACGTTTTTAATGGACCCTGTACATATATATATGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163139.8
CDS GCA 72 bp CCCTCGCTGACCCGACTGTGGCTGCGGCAGGTTCCGTaGAGCCAGGGTGATGGGCTTCACCACACCCACTGG +
Preference number: 6 (lower is better)
Translates to: PSLTRLWLRQVP*SQGDGLHHTHW
Trigger: CCAGTGGGTGTGGTGAAGCCCATCACCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp TTGCCATCGATGGGTGTGCCCACGAAGAGCTTGGCCTaGCCCTGGCCGGGTGGCCCAGCAATGAGCACTCCC +
Preference number: 6 (lower is better)
Translates to: LPSMGVPTKSLA*PWPGGPAMSTP
Trigger: GGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp AGAGCTTCACCACCCGCTGGTCTCCCTGACCCTGTGTaGTGGGCGCCACTTCCCGGGCAGAAGGTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: RASPPAGLPDPV*WAPLPGQKVSG
Trigger: GCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACAGGGTCAGGGAGACCAGCGGGTGGTGAAGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp CTGCCTGGGATGTGGAAAAGGCACTCGTACCCTCGCTaGCCCGACTGTGGCTGCGGCAGGTTCCGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: LPGMWKRHSYPR*PDCGCGRFRAA
Trigger: GGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGCCTTTTCCACATCCCAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp TTGGGGTCTGTGCAGCGGCTGCTGCCATGGTGGGCATaGATCCAGGAGGCTGGTGAGTCAGCTGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LGSVQRLLPWWA*IQEAGESAGQW
Trigger: CCACTGCCCAGCTGACTCACCAGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp GTGGAAAAGGCACTCGTACCCTCGCTGACCCGACTGTaGCTGCGGCAGGTTCCGTGCAGCCAGGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: VEKALVPSLTRL*LRQVPCSQGDG
Trigger: CCCATCACCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGCCTTTTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp GAGCAGTCCCGCACACACACCTCCACCAGGGCATCATaGGCCCGCAGCGTGCTGGCATCTCCAATCTCGCAG +
Preference number: 6 (lower is better)
Translates to: EQSRTHTSTRAS*ARSVLASPISQ
Trigger: CTGCGAGATTGGAGATGCCAGCACGCTGCGGGCCCATGATGCCCTGGTGGAGGTGTGTGTGCGGGACTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp GAGCCACCACACTTTCATAAGCCAGGGCCGGCCTGCCGCTGGGGTTaGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTGCGAGTGC +
Preference number: 6 (lower is better)
Translates to: EPPHFHKPGPACRWG*QGPPESCGCGRCEC
Trigger: GCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp GTCCCTCCCTGCCGAGGGCCTGTCTCTGGGGACAGCTTGAGAATCTaGGGGTCTGTGCAGCGGCTGCTGCCATGGTGGGCATGCATCCAG +
Preference number: 6 (lower is better)
Translates to: VPPCRGPVSGDSLRI*GSVQRLLPWWACIQ
Trigger: CTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAAGATTCTCAAGCTGTCCCCAGAGACAGGCCCTCGGCAGGGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp TGCATCCAGGAGGCTGGTGAGTCAGCTGGGCAGTGGTaGCGAAGGGAACAGCGGCGCTCAGCTACGCACCAG +
Preference number: 6 (lower is better)
Translates to: CIQEAGESAGQW*RREQRRSATHQ
Trigger: CTGGTGCGTAGCTGAGCGCCGCTGTTCCCTTCGTCACCACTGCCCAGCTGACTCACCAGCCTCCTGGATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp TCCCTCCCTGCCGAGGGCCTGTCTCTGGGGACAGCTTaGGAATCTTGGGGTCTGTGCAGCGGCTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: SLPAEGLSLGTA*ESWGLCSGCCH
Trigger: ATGGCAGCAGCCGCTGCACAGACCCCAAGATTCTCAAGCTGTCCCCAGAGACAGGCCCTCGGCAGGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp ATGGCCGGCAGTGTCAGCAGGCTGTCCGAATACACCTaGAGCATCCCAGGTGAGAACTCGAAGCCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: MAGSVSRLSEYT*SIPGENSKPPA
Trigger: GGCCGGGGGCTTCGAGTTCTCACCTGGGATGCTGCAGGTGTATTCGGACAGCCTGCTGACACTGCCGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp ATCTGGCCGCTCTCCCAGTTCTGGCGGGCTGCGCTTTaGGTTGTCTATAGACGGCGCCCGGCACACCATGGT +
Preference number: 6 (lower is better)
Translates to: IWPLSQFWRAAL*VVYRRRPAHHG
Trigger: ACCATGGTGTGCCGGGCGCCGTCTATAGACAACCCAAAGCGCAGCCCGCCAGAACTGGGAGAGCGGCCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp GGCCTGCCGCTGGGGTTTGCAAGGTCCACCAGAATCTaGCGGATGCGGCCGCTGCGAGTGCCAGCAAAAACC +
Preference number: 6 (lower is better)
Translates to: GLPLGFARSTRI*RMRPLRVPAKT
Trigger: GGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp CACTTTCATAAGCCAGGGCCGGCCTGCCGCTGGGGTTaGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: HFHKPGPACRWG*QGPPESCGCGR
Trigger: GCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp GGGAAGTATTCTGATTTGCCATCGATGGGTGTGCCCACGAAGAGCTaGGCCTGGCCCTGGCCGGGTGGCCCAGCAATGAGCACTCCCGCC +
Preference number: 6 (lower is better)
Translates to: GKYSDLPSMGVPTKS*AWPWPGGPAMSTPA
Trigger: GGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAATCAGAATACTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp GTGAGTGAGGCCCCAGTCACTGGCCACAAAGGTGCGGAAGGCAGGTaGTGGACCCAAACCAGCTGGGGGCGAGCTGATGGCTATCCACAC +
Preference number: 6 (lower is better)
Translates to: VSEAPVTGHKGAEGR*WTQTSWGRADGYPH
Trigger: GTGTGGATAGCCATCAGCTCGCCCCCAGCTGGTTTGGGTCCACAACCTGCCTTCCGCACCTTTGTGGCCAGTGACTGGGGCCTCACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp GCGGATGCGGCCGCTGCGAGTGCCAGCAAAAACCACGGTGCGGCCTaGGTAGTCATAGGCAGCCACAGCAGTCAGGCCATCTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: ADAAAASASKNHGAA*VVIGSHSSQAIFLV
Trigger: GACAAGGAAGATGGCCTGACTGCTGTGGCTGCCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp TGTTCTGCGCTGATGTACTCGCTCTCCACAGGGCTGCAAAGCACCTaGCCCACGTGCACGCCTAGCCGCACATCCTCAAACCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: CSALMYSLSTGLQST*PTCTPSRTSSNRRP
Trigger: GGGCCTCCGGTTTGAGGATGTGCGGCTAGGCGTGCACGTGGGCAAGGTGCTTTGCAGCCCTGTGGAGAGCGAGTACATCAGCGCAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp CAGCAGGCTGTCCGAATACACCTGCAGCATCCCAGGTaGGAACTCGAAGCCCCCGGCCCGCACCGTGACTTT +
Preference number: 6 (lower is better)
Translates to: QQAVRIHLQHPR*ELEAPGPHRDF
Trigger: AAAGTCACGGTGCGGGCCGGGGGCTTCGAGTTCTCACCTGGGATGCTGCAGGTGTATTCGGACAGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp TTCACGCACAGCCGCACAATCTTGGAGGTGAAGAAGTaGTCGCCAGCGGCGTCGGGCGAGGTAAGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: FTHSRTILEVKK*SPAASGEVSCV
Trigger: CACGCAGCTTACCTCGCCCGACGCCGCTGGCGAGCACTTCTTCACCTCCAAGATTGTGCGGCTGTGCGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp GGATGCGGCCGCTGCGAGTGCCAGCAAAAACCACGGTaGGGCCTTGGTAGTCATAGGCAGCCACAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GCGRCECQQKPR*GLGSHRQPQQS
Trigger: TGACTGCTGTGGCTGCCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp ACTTTCATAAGCCAGGGCCGGCCTGCCGCTGGGGTTTaGAAGGTCCACCAGAATCTTGCGGATGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: TFISQGRPAAGV*KVHQNLADAAA
Trigger: AGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CCTCAGTGTGAACAGGCACAGCGCCGACTCCTTGGGTaGCTTCACGCGGTTCTTCTGGCCCTGTGCGAACAC +
Preference number: 6 (lower is better)
Translates to: PQCEQAQRRLLG*LHAVLLALCEH
Trigger: GTGTTCGCACAGGGCCAGAAGAACCGCGTGAAGCCACCCAAGGAGTCGGCGCTGTGCCTGTTCACACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CACCGTGTAGTTGAGCCGGGAATTGCCAGGAGCAGGTaGCAGGAGATTCCGCCCCTTGAGGATGAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: HRVVEPGIARSR*QEIPPLEDERG
Trigger: TCCCCGCTCATCCTCAAGGGGCGGAATCTCCTGCCACCTGCTCCTGGCAATTCCCGGCTCAACTACACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp GCAGCAAGAGGCCACCCCCACCACCGATACCCACAATaGCCGGCAGTGTCAGCAGGCTGTCCGAATACACCT +
Preference number: 6 (lower is better)
Translates to: AARGHPHHRYPQ*PAVSAGCPNTP
Trigger: AGGTGTATTCGGACAGCCTGCTGACACTGCCGGCCATTGTGGGTATCGGTGGTGGGGGTGGCCTCTTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp GCCGCTGCGAGTGCCAGCAAAAACCACGGTGCGGCCTaGGTAGTCATAGGCAGCCACAGCAGTCAGGCCATC +
Preference number: 6 (lower is better)
Translates to: AAASASKNHGAA*VVIGSHSSQAI
Trigger: GATGGCCTGACTGCTGTGGCTGCCTATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp GAATTGCCAGGAGCAGGTGGCAGGAGATTCCGCCCCTaGAGGATGAGCGGGGAGCTGGGCTTCAGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: ELPGAGGRRFRP*RMSGELGFSSK
Trigger: CTTGGAGCTGAAGCCCAGCTCCCCGCTCATCCTCAAGGGGCGGAATCTCCTGCCACCTGCTCCTGGCAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp AGGCAGGTTGTGGACCCAAACCAGCTGGGGGCGAGCTaGTGGCTATCCACACACCCCTCAGCAGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: RQVVDPNQLGAS*WLSTHPSAAAR
Trigger: TCTTGCTGCTGCTGAGGGGTGTGTGGATAGCCATCAGCTCGCCCCCAGCTGGTTTGGGTCCACAACCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp ACCCTGTGTGATGGGCGCCACTTCCCGGGCAGAAGGTaGGTGGCAATGGATGCGGCCATCTTCCAGGATGCT +
Preference number: 6 (lower is better)
Translates to: TLCDGRHFPGRR*VAMDAAIFQDA
Trigger: AGCATCCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
ENSMUST00000205121.2
CDS GCA 72 bp GGTCCACCAGAATCTTGCGGATGCGGCCGCTGCGAGTaGCAGCAAAAACCACGGTGCGGCCTTGGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: GPPESCGCGRCE*QQKPRCGLGSH
Trigger: ATGACTACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp TTGCAAGGTCCACCAGAATCTTGCGGATGCGGCCGCTaGGAGTGCCAGCAAAAACCACGGTGCGGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: LQGPPESCGCGR*ECQQKPRCGLG
Trigger: ACCAAGGCCGCACCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp CCTGAGCCACCACACTTTCATAAGCCAGGGCCGGCCTaGCGCTGGGGTTTGCAAGGTCCACCAGAATCTTGC +
Preference number: 6 (lower is better)
Translates to: PEPPHFHKPGPA*RWGLQGPPESC
Trigger: GCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp AAGGGGTGTGCCCTCGATGGTGACCGTGCCACCCAGTaGCTGGTTGAAATCCTGCCCGCAGAAGTCGTCATC +
Preference number: 6 (lower is better)
Translates to: KGCALDGDRATQ*LVEILPAEVVI
Trigger: GATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAGGGCACACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CCACCACACTTTCATAAGCCAGGGCCGGCCTGCCGCTaGGGTTTGCAAGGTCCACCAGAATCTTGCGGATGC +
Preference number: 6 (lower is better)
Translates to: PPHFHKPGPACR*GLQGPPESCGC
Trigger: GCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGGCAGGCCGGCCCTGGCTTATGAAAGTGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp ATGGGCGCCACTTCCCGGGCAGAAGGTGAGTGGCAATaGATGCGGCCATCTTCCAGGATGCTCTCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: MGATSRAEGEWQ*MRPSSRMLSVS
Trigger: GGAGACTGAGAGCATCCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
ENSMUST00000205121.2
CDS CAA 72 bp TTGGCGCGGATTCGAGGTTCACGGACAGTGGCCAGGTaGGTGCCCGTGACTGTTAGGAGGGTCCCACCACTA +
Preference number: 6 (lower is better)
Translates to: LARIRGSRTVAR*VPVTVRRVPPL
Trigger: TAGTGGTGGGACCCTCCTAACAGTCACGGGCACCAACCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp CAAGCCTGCAGCACGAGCGGCACCTGGGACATGGTGACTGACACATaGCGCGGCTGGACAGTTAACTGCACACACTGCAGCAGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: QACSTSGTWDMVTDT*RGWTVNCTHCSRSE
Trigger: CTCTGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGCCGCTCGTGCTGCAGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp TCCAAGCCTGCAGCACGAGCGGCACCTGGGACATGGTaGCTGACACATTGCGCGGCTGGACAGTTAACTGCA +
Preference number: 6 (lower is better)
Translates to: SKPAARAAPGTW*LTHCAAGQLTA
Trigger: TGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGCCGCTCGTGCTGCAGGCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp ATGGTGACCGTGCCACCCAGTGGCTGGTTGAAATCCTaGCCGCAGAAGTCGTCATCAATCTGCAGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: MVTVPPSGWLKS*PQKSSSICRGE
Trigger: CTCGCCCCTGCAGATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp AGCGCCGACTCCTTGGGTGGCTTCACGCGGTTCTTCTaGCCCTGTGCGAACACAGTGAACAACACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SADSLGGFTRFF*PCANTVNNTSS
Trigger: TGAGGAGGTGTTGTTCACTGTGTTCGCACAGGGCCAGAAGAACCGCGTGAAGCCACCCAAGGAGTCGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp GGTGTGCCCTCGATGGTGACCGTGCCACCCAGTGGCTaGTTGAAATCCTGCCCGCAGAAGTCGTCATCAATC +
Preference number: 6 (lower is better)
Translates to: GVPSMVTVPPSG*LKSCPQKSSSI
Trigger: GATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAGGGCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp TGTGTGATGGGCGCCACTTCCCGGGCAGAAGGTGAGTaGCAATGGATGCGGCCATCTTCCAGGATGCTCTCA +
Preference number: 6 (lower is better)
Translates to: CVMGATSRAEGE*QWMRPSSRMLS
Trigger: TGAGAGCATCCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
ENSMUST00000205121.2
CDS CCA 72 bp CCGTGCAGCCAGGGTGATGGGCTTCACCACACCCACTaGCACATAGATGTGGGTAGAAGGCAGGATCTGTGG +
Preference number: 6 (lower is better)
Translates to: PCSQGDGLHHTH*HIDVGRRQDLW
Trigger: CCACAGATCCTGCCTTCTACCCACATCTATGTGCCAGTGGGTGTGGTGAAGCCCATCACCCTGGCTGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp TTGAGAATCTTGGGGTCTGTGCAGCGGCTGCTGCCATaGTGGGCATGCATCCAGGAGGCTGGTGAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LRILGSVQRLLP*WACIQEAGESA
Trigger: AGCTGACTCACCAGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAAGATTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp GTGCCCTCGATGGTGACCGTGCCACCCAGTGGCTGGTaGAAATCCTGCCCGCAGAAGTCGTCATCAATCTGC +
Preference number: 6 (lower is better)
Translates to: VPSMVTVPPSGW*KSCPQKSSSIC
Trigger: GCAGATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp CTGATGTACTCGCTCTCCACAGGGCTGCAAAGCACCTaGCCCACGTGCACGCCTAGCCGCACATCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: LMYSLSTGLQST*PTCTPSRTSSN
Trigger: GTTTGAGGATGTGCGGCTAGGCGTGCACGTGGGCAAGGTGCTTTGCAGCCCTGTGGAGAGCGAGTACATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp CCTCCATACTTGGCGCGGATTCGAGGTTCACGGACAGTGGCCAGGTaGGTGCCCGTGACTGTTAGGAGGGTCCCACCACTATTGATGCTC +
Preference number: 6 (lower is better)
Translates to: PPYLARIRGSRTVAR*VPVTVRRVPPLLML
Trigger: GAGCATCAATAGTGGTGGGACCCTCCTAACAGTCACGGGCACCAACCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAAGTATGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp GGCGGTTGGCTGCATAGTCCAGCAGTAGAAGCTTGTTaGCGTTGTCTGTGCTGCCCAGACCATGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GGWLHSPAVEAC*RCLCCPDHVGR
Trigger: CCTGCCCACATGGTCTGGGCAGCACAGACAACGTCAACAAGCTTCTACTGCTGGACTATGCAGCCAACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp AGATTCTCACCGGTGATGGTTAGTCGAGTCCCTCCCTaGCGAGGGCCTGTCTCTGGGGACAGCTTGAGAATC +
Preference number: 6 (lower is better)
Translates to: RFSPVMVSRVPP*RGPVSGDSLRI
Trigger: GATTCTCAAGCTGTCCCCAGAGACAGGCCCTCGGCAGGGAGGGACTCGACTAACCATCACCGGTGAGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp CTACATCACTGCCAGCATTCAGATGGCTCCCTTCGATaGCAATCCAGGTACCTCCAGACAGAGGCCCACGGG +
Preference number: 6 (lower is better)
Translates to: LHHCQHSDGSLR*QSRYLQTEAHG
Trigger: CCCGTGGGCCTCTGTCTGGAGGTACCTGGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp AGCAGGGCCGACCGCCAATGGACACAGCTACATCACTaGCAGCATTCAGATGGCTCCCTTCGATGCCAATCC +
Preference number: 6 (lower is better)
Translates to: SRADRQWTQLHH*QHSDGSLRCQS
Trigger: GGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGGCGGTCGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp GTGTCCACCACCTGCTCCAGTTTGCTTCGAAGCCGCTaGCTTCGAGCCTGTTCATCTTTCTCCAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: VSTTCSSLLRSR*LRACSSFSRAT
Trigger: GGTGGCTCTGGAGAAAGATGAACAGGCTCGAAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGGTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp GGCACCTGGGACATGGTGACTGACACATTGCGCGGCTaGACAGTTAACTGCACACACTGCAGCAGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: GTWDMVTDTLRG*TVNCTHCSRSE
Trigger: CTCTGACCTGCTGCAGTGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CGTGCGCACATTGTCCATGATGAAACCAATCTCATCTaGCCGCTCTCCCAGTTCTGGCGGGCTGCGCTTTGG +
Preference number: 6 (lower is better)
Translates to: RAHIVHDETNLI*PLSQFWRAALW
Trigger: CCAAAGCGCAGCCCGCCAGAACTGGGAGAGCGGCCAGATGAGATTGGTTTCATCATGGACAATGTGCGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp TTCACCTCGGGGTTGGAGAGCTGGGCACGATTGATGTaGATAACAATAGGGGCGCTGCCAGGAGTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: FTSGLESWARLM*ITIGALPGVCP
Trigger: CGGGCACACTCCTGGCAGCGCCCCTATTGTTATCAACATCAATCGTGCCCAGCTCTCCAACCCCGAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp TGCTCAGGGCCATTGTGTCCACCACCTGCTCCAGTTTaGTTCGAAGCCGCTGCCTTCGAGCCTGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: CSGPLCPPPAPV*FEAAAFEPVHL
Trigger: AAGATGAACAGGCTCGAAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGGTGGACACAATGGCCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp CGTGCTGGCATCTCCAATCTCGCAGACAATCTGTTCTaGGCTGATGTACTCGCTCTCCACAGGGCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: RAGISNLADNLF*ADVLALHRAAK
Trigger: CTTTGCAGCCCTGTGGAGAGCGAGTACATCAGCGCAGAACAGATTGTCTGCGAGATTGGAGATGCCAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CCATGCAGCTATTTTCCCTCTCAATGCCTCCATACTTaGCGCGGATTCGAGGTTCACGGACAGTGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: PCSYFPSQCLHT*RGFEVHGQWPG
Trigger: ACCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp TGGTACACAAAGCCAAACATGTCAGCATCTTCCTCGTaGGCCATGAGCCGGCGACTGGACAGAGTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: WYTKPNMSASSS*AMSRRLDRVGK
Trigger: CTTCCCCACTCTGTCCAGTCGCCGGCTCATGGCCAACGAGGAAGATGCTGACATGTTTGGCTTTGTGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp ACCATGCAGCTATTTTCCCTCTCAATGCCTCCATACTaGGCGCGGATTCGAGGTTCACGGACAGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TMQLFSLSMPPY*ARIRGSRTVAR
Trigger: CCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp TCATTGTACACCATGCAGCTATTTTCCCTCTCAATGCCTCCATACTaGGCGCGGATTCGAGGTTCACGGACAGTGGCCAGGTTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SLYTMQLFSLSMPPY*ARIRGSRTVARLVP
Trigger: GGGCACCAACCTGGCCACTGTCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGGTGTACAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp TGGCATCTCCAATCTCGCAGACAATCTGTTCTGCGCTaGTGTACTCGCTCTCCACAGGGCTGCAAAGCACCT +
Preference number: 6 (lower is better)
Translates to: WHLQSRRQSVLR*CTRSPQGCKAP
Trigger: AGGTGCTTTGCAGCCCTGTGGAGAGCGAGTACATCAGCGCAGAACAGATTGTCTGCGAGATTGGAGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CCA 72 bp CCAATGGACACAGCTACATCACTGCCAGCATTCAGATaGCTCCCTTCGATGCCAATCCAGGTACCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: PMDTATSLPAFR*LPSMPIQVPPD
Trigger: GTCTGGAGGTACCTGGATTGGCATCGAAGGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp TTGTACTTCACCTCGGGGTTGGAGAGCTGGGCACGATaGATGTTGATAACAATAGGGGCGCTGCCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: LYFTSGLESWAR*MLITIGALPGV
Trigger: CACTCCTGGCAGCGCCCCTATTGTTATCAACATCAATCGTGCCCAGCTCTCCAACCCCGAGGTGAAGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 72 bp TCTATAGACGGCGCCCGGCACACCATGGTGGTGTCATaGTACACCATGCAGCTATTTTCCCTCTCAATGCCT +
Preference number: 6 (lower is better)
Translates to: SIDGARHTMVVS*YTMQLFSLSMP
Trigger: AGGCATTGAGAGGGAAAATAGCTGCATGGTGTACAATGACACCACCATGGTGTGCCGGGCGCCGTCTATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS CAA 90 bp AACTCATCCTGGTACACAAAGCCAAACATGTCAGCATCTTCCTCGTaGGCCATGAGCCGGCGACTGGACAGAGTGGGGAAGTATTCTGAT +
Preference number: 6 (lower is better)
Translates to: NSSWYTKPNMSASSS*AMSRRLDRVGKYSD
Trigger: ATCAGAATACTTCCCCACTCTGTCCAGTCGCCGGCTCATGGCCAACGAGGAAGATGCTGACATGTTTGGCTTTGTGTACCAGGATGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp CATTCCACACAACCGACAGGTTCACAGGCAGATCGCTaGCATCATTCCCCTCATAGGAGTACGAGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: HSTQPTGSQADR*HHSPHRSTRSS
Trigger: AGAACTCCTCGTACTCCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS TCA 72 bp TGTAGAGGTGGGCCTGGATGTTCTGGGGGTTGTCAATaGCAAAGTTGCCATTCCACACAACCGACAGGTTCA +
Preference number: 6 (lower is better)
Translates to: CRGGPGCSGGCQ*QSCHSTQPTGS
Trigger: TGAACCTGTCGGTTGTGTGGAATGGCAACTTTGTCATTGACAACCCCCAGAACATCCAGGCCCACCTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8
CDS GCA 72 bp TGTCATTGTACACCATGCAGCTATTTTCCCTCTCAATaGCTCCATACTTGGCGCGGATTCGAGGTTCACGGA +
Preference number: 6 (lower is better)
Translates to: CHCTPCSYFPSQ*LHTWRGFEVHG
Trigger: TCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGGTGTACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049845.6
ENSMUST00000163139.8