Pregenerated sensors for PLXDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017417Ensembl transcript IDs: ENSMUST00000017561.15, ENSMUST00000107564.2, ENSMUST00000107565.3
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCATCTATCCTGGCAGAGGCCAGCAGCCTGTGAATCTCTGAGCTaGTTTGATCCTGTGATCCAGCCTGGAGCTGGCTTGCCGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LHLSWQRPAACESLS*FDPVIQPGAGLPPL Trigger: AAGAGGCGGCAAGCCAGCTCCAGGCTGGATCACAGGATCAAAGCAGCTCAGAGATTCACAGGCTGCTGGCCTCTGCCAGGATAGATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR CCA 90 bp | AGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTaGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SVGTSTPSSQSSLQS*RDGGRFPGQGLSLP Trigger: TGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR CCA 90 bp | AACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATaGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NVNSQFPKLFAELER*RPLSRSRSLPPIPD Trigger: ATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR CCA 90 bp | CAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTATCCTaGCAGAGGCCAGCAGCCTGTGAATCTCTGAGCTGCTTTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: QSLHCISWSKLLHLS*QRPAACESLSCFDP Trigger: AGGATCAAAGCAGCTCAGAGATTCACAGGCTGCTGGCCTCTGCCAGGATAGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGGACCAGCTTGCAGGGTaGAGGCTGAGGGGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLDQLAG*RLRGRA Trigger: TGCCCTGCCCCTCAGCCTCCACCCTGCAAGCTGGTC...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCGAAGCCTCCTCCCATTaGAACAGGGAACTCTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GQGRVQNELQATVLGCWPEASSH*NRELLR Trigger: CCTCAAGAGTTCCCTGTTTCAATGGGAGGAGGCTTC...GGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGTTGTCTTGTCTTCCTaGCCCAGGGCCAGCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: QAECGNVNSQFPKLFAELVVLSS*PRASSE Trigger: CTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAAC...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATGGCCCCACTCATTACTaGCAGCCATGCAAGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LERWRPLSRSRSLPPIPDGPTHY*QPCKTS Trigger: GCTGGTCTTGCATGGCTGCCAGTAATGAGTGGGGCC...ATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | GGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGCAGTGTGGGCTTCAGTaGGCAGGAGGAACACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNVNSQFPKLFAELERWRQCGLQ*AGGTQE Trigger: CTCCTGTGTTCCTCCTGCTCACTGAAGCCCACACTG...CCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGCACTTCTCTGTGCTGTaGCTTGTCTTTCATGCCATC | + |
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Preference number: 2 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQHFSVL*LVFHAI Trigger: GATGGCATGAAAGACAAGTCACAGCACAGAGAAGTG...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR TCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGTCGCAGTTGTATTACTaGGCCCCCTTTAAATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LITGSHARPACRVEAEGQSQLYY*APFKWG Trigger: ACCCCATTTAAAGGGGGCTCAGTAATACAACTGCGA...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTGGCACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGTGACTTGTCTTTCATaGCATCTCCAGGTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SVGTTSCCLVFLAQGQLRVTCLS*HLQVSG Trigger: GCCAGAGACCTGGAGATGGCATGAAAGACAAGTCAC...TCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGTGCCAACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGCCGCTTTCCAGGTCACTTCTCTGTGCTGTaGCTTGTCTTTCATGCCATC | + |
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Preference number: 2 (lower is better) Translates to: PSSQSSLQSWRDGGRFPGHFSVL*LVFHAI Trigger: GATGGCATGAAAGACAAGTCACAGCACAGAGAAGTG...ACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCGCAGTTGTATTACTaGGCCCCCTTTAAATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PKALCRAGEMEAAFQVKVSQLYY*APFKWG Trigger: ACCCCATTTAAAGGGGGCTCAGTAATACAACTGCGA...GACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTGTAAGGCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAAAGCCTGGAGCTGGCTTaGCGCCTCTTCTCTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: SSVRHGGVQSLHCISWSKSLELA*RLFSGI Trigger: GATTCCAGAGAAGAGGCGGCAAGCCAGCTCCAGGCT...TTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGCCTTACAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCTCTCAGTGTGGGCTTCAGTaGGCAGGAGGAACACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSPRLLFSLLAHLRVKRSQCGLQ*AGGTQE Trigger: CTCCTGTGTTCCTCCTGCTCACTGAAGCCCACACTG...AGAGCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAGACAGGCTCTCTCTGTAGACCAGGCTGGCCTTGATCTCAGAGCTCAGCCTAATTGTCCCCCTCTTTaGAGGAAACTACTGCCGTTG | + |
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Preference number: 2 (lower is better) Translates to: SRQALSVDQAGLDLRAQPNCPPL*RKLLPL Trigger: CAACGGCAGTAGTTTCCTTCAAAGAGGGGGACAATT...AGGCTGAGCTCTGAGATCAAGGCCAGCCTGGTCTACAGAGAGAGCCTGTCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | GCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTGCTGCTTTGATCCTGTaGTCCAGCCTGGAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AWWSSEPALYLLEQITSSAALIL*SSLELA Trigger: AGCCAGCTCCAGGCTGGATCACAGGATCAAAGCAGC...AGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGAATCTATAGACCCCGGAATGCAATGGCCCAGTGTGGGCTTCAGTGAGCAGGTGACTTGTCTTTCATaGCATCTCCAGGTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LESIDPGMQWPSVGFSEQVTCLS*HLQVSG Trigger: GCCAGAGACCTGGAGATGGCATGAAAGACAAGTCAC...CTGCTCACTGAAGCCCACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGGTTGTCTTGTCTTCCTaGCCCAGGGCCAGCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: NASSPRLLFSLLAHLRVKVVLSS*PRASSE Trigger: CTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAAC...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGGGATGAAGGTGAGCTCTAGGTTTTCATTGTCCTTTAGAAGCCGTCCTGGGCAGGGTACAGAATaGGCTGCAGGCTACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FFGMKVSSRFSLSFRSRPGQGTE*AAGYSA Trigger: AGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCC...AGGACGGCTTCTAAAGGACAATGAAAACCTAGAGCTCACCTTCATCCCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGCCTTTAAATGGGGTGTaGAGACCAAACTGTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLPLNGV*RPNCSV Trigger: AACACTACAGTTTGGTCTGCACACCCCATTTAAAGG...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGTGCAATGGCCCAGTGTaGGCTTCAGTGAGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NASSPRLLFSLLAHLRVKCNGPV*ASVSRR Trigger: CCTCCTGCTCACTGAAGCCCACACTGGGCCATTGCA...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAGACAGGCTCTCTCTGTAGACCAGGCTGGCCTTGATCTCAGAGCTCAGCCTAAAATCACTTCTCTGTaGTGTGACTTGTCTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: SRQALSVDQAGLDLRAQPKITSL*CDLSFM Trigger: CATGAAAGACAAGTCACAGCACAGAGAAGTGATTTT...AGGCTGAGCTCTGAGATCAAGGCCAGCCTGGTCTACAGAGAGAGCCTGTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAAGCAAGACCAGCTCTTaGATCTATAGACCCCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTSKTSS*IYRPRN Trigger: ATTCCGGGGTCTATAGATTCAAGAGCTGGTCTTGCT...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR GCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGAAAATCACTTCTCTGTaGTGTGACTTGTCTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: NASSPRLLFSLLAHLRVKKITSL*CDLSFM Trigger: CATGAAAGACAAGTCACAGCACAGAGAAGTGATTTT...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR CCA 72 bp | TACCTTCGCGGCCACCGTGCTTCAACGGGATCCAACTaGAGCCCCTTGCTAAGGCAGGGGTGTCTCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: YLRGHRASTGSN*SPLLRQGCLRE Trigger: TTCCCTGAGACACCCCTGCCTTAGCAAGGGGCTCCAGTTGGATCCCGTTGAAGCACGGTGGCCGCGAAGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR CCA 72 bp | CCAGACACATGGCACAGTAAGGGCCCCACTCATTACTaGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PDTWHSKGPTHY*QPCKTSLQGGG Trigger: GCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAGTGGGGCCCTTACTGTGCCATGTGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGCCACAAGCTGTTGTCTaGTCTTCCTGGCCCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QAECGNVNSQFPKLFAELPQAVV*SSWPRA Trigger: GGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGG...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCTCTAAGCCACAAAGTTaGGAGCCAAGGGCACTGACT | + |
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Preference number: 3 (lower is better) Translates to: GQGRVQNELQATVLGCWPSKPQS*EPRALT Trigger: AGTCAGTGCCCTTGGCTCCAAACTTTGTGGCTTAGA...GGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGTCCAACTGGAGCCCCTaGCTAAGGCAGGGGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLSNWSP*LRQGCL Trigger: GAGACACCCCTGCCTTAGCAAGGGGCTCCAGTTGGA...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR GCA 72 bp | TCCTGGCAGAGGCCAGCAGCCTGTGAATCTCTGAGCTaGTTTGATCCTGTGATCCAGCCTGGAGCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SWQRPAACESLS*FDPVIQPGAGL Trigger: CAAGCCAGCTCCAGGCTGGATCACAGGATCAAAGCAGCTCAGAGATTCACAGGCTGCTGGCCTCTGCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR CCA 72 bp | TCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATaGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SQFPKLFAELER*RPLSRSRSLPP Trigger: GGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR GCA 72 bp | GTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTaGAGAGCTGGAGAGATGGAGGCCGCTTTCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: VWERQLPVPKAL*RAGEMEAAFQV Trigger: GACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCTGGCACCACAAGCTGTaGTCTTGTCTTCCTGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCWHHKL*SCLPGP Trigger: TGGGCCAGGAAGACAAGACAACAGCTTGTGGTGCCA...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCCCACAAGCTGTTGTCTaGTCTTCCTGGCCCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ASSPRLLFSLLAHLRVKRPQAVV*SSWPRA Trigger: GGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGG...GCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGTCTAAGCCACAAAGTTaGGAGCCAAGGGCACTGACT | + |
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Preference number: 3 (lower is better) Translates to: GNVNSQFPKLFAELERWRSKPQS*EPRALT Trigger: AGTCAGTGCCCTTGGCTCCAAACTTTGTGGCTTAGA...CCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | GCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTCAGCCTGGAGCTGGCTaGCCGCCTCTTCTCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: AWWSSEPALYLLEQITSSQPGAG*PPLLWN Trigger: ATTCCAGAGAAGAGGCGGCAAGCCAGCTCCAGGCTG...AGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR TCA 72 bp | CAAACGAAGCCTCCTCCCATTGAAACAGGGAACTCTTaGGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: QTKPPPIETGNS*GQCSPRSLRSC Trigger: ACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAGAGTTCCCTGTTTCAATGGGAGGAGGCTTCGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CAA 90 bp | TCAAGACAGGCTCTCTCTGTAGACCAGGCTGGCCTTGATCTCAGAGCTCAGCCTTCTCTGTGCTGTGACTaGTCTTTCATGCCATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SRQALSVDQAGLDLRAQPSLCCD*SFMPSP Trigger: TGGAGATGGCATGAAAGACAAGTCACAGCACAGAGA...AGGCTGAGCTCTGAGATCAAGGCCAGCCTGGTCTACAGAGAGAGCCTGTCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTGACCAAACTGTAGTGTaGGCACCACAAGCTGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLDQTVV*APQAVV Trigger: GACAACAGCTTGTGGTGCCAACACTACAGTTTGGTC...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR-3UTR CAA 90 bp | CTTGAATCTATAGACCCCGGAATGCAATGGCCCAGTGTGGGCTTCAGTGAGCAGTCTCTGTGCTGTGACTaGTCTTTCATGCCATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LESIDPGMQWPSVGFSEQSLCCD*SFMPSP Trigger: TGGAGATGGCATGAAAGACAAGTCACAGCACAGAGA...CTGCTCACTGAAGCCCACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR TCA 72 bp | AAGGGCACTGACTCCATAGCTAGCAAGACCAGCTCTTaGATCTATAGACCCCGGAATGCAATGGCCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KGTDSIASKTSS*IYRPRNAMAQC Trigger: ACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAGAGCTGGTCTTGCTAGCTATGGAGTCAGTGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| 3UTR CCA 72 bp | CACTGTATCTCCTGGAGCAAATTACTTCATCTATCCTaGCAGAGGCCAGCAGCCTGTGAATCTCTGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: HCISWSKLLHLS*QRPAACESLSC Trigger: GCAGCTCAGAGATTCACAGGCTGCTGGCCTCTGCCAGGATAGATGAAGTAATTTGCTCCAGGAGATACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGAGGAAACTACTGCCGTaGATAACAGAACAGGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLRKLLP*ITEQVN Trigger: GTTAACCTGTTCTGTTATCAACGGCAGTAGTTTCCT...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGGGATGAAGGTGAGCTCTAGGTTTTCATTGTCCTTTAGAAGCCGTCCTCAGGAGCCAGGTAAATaGTCCCCCTCTTTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFGMKVSSRFSLSFRSRPQEPGK*SPSLKE Trigger: TTCCTTCAAAGAGGGGGACAATTTACCTGGCTCCTG...AGGACGGCTTCTAAAGGACAATGAAAACCTAGAGCTCACCTTCATCCCAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAGACCAAACTGTAGTGTaGGCACCACAAGCTGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTDQTVV*APQAVV Trigger: GACAACAGCTTGTGGTGCCAACACTACAGTTTGGTC...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCCCGGTGTAGGGCCGCCTaGAAGGTGAAGCTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGYRMSCRLQCSDVGPRCRAA*KVKLPL Trigger: CAGGGGCAGCTTCACCTTCCAGGCGGCCCTACACCG...GGGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCATGGCTGGCCAGTGGTaGGGTCTCCGCTCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGRVQNELQATVLGCWPMAGQW*GLRSMK Trigger: CTTCATCGAGCGGAGACCTCACCACTGGCCAGCCAT...GGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGCGATACCCACGATGGTaGCCAGGTGCACGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LITGSHARPACRVEAEGQRYPRW*PGARED Trigger: GTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCG...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCCGGACAGGCCTGCCTTaGCAGGGTGCTGGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCRTGLP*QGAGQS Trigger: GCTCTGCCCAGCACCCTGTCAAGGCAGGCCTGTCCG...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR GCA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGCTCCGACTCCAGCCTTaGCTGGTCCTCTTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQLRLQP*LVLLAV Trigger: GACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAG...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCCGCATGTCTTGCCTTCTaGCTCCTGGGCACAGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGYRMSCRLQCSDVGPACLAF*LLGTAV Trigger: TACGGCTGTGCCCAGGAGGCAGAAGGCAAGACATGC...GGGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCGACTCCAGCCTTGCCTaGTCCTCTTGGCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GQGRVQNELQATVLGCWPDSSLA*SSWQSM Trigger: CATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTC...GGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCCCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRPLSRSRSLPPIPDFSAPEVCR*PGSPHP Trigger: TGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGG...GGCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGGCACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGACTCCGGTTGCTATGGTaGTCTGCCGCAGAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVGTTSCCLVFLAQGQLRLRLLW*SAAEDA Trigger: GGCATCCTCTGCGGCAGATCACCATAGCAACCGGAG...TCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGTGCCAACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAACGGACAGGCCTGCCTTaGCAGGGTGCTGGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQRTGLP*QGAGQS Trigger: GCTCTGCCCAGCACCCTGTCAAGGCAGGCCTGTCCG...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGGCTGTCAGGGGAGGCTaGGTAGTGGCTATCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LITGSHARPACRVEAEGQAVRGG*VVAIIL Trigger: CAGGATGATAGCCACTACTCAGCCTCCCCTGACAGC...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCCAAATCCCAGCCAGGATaGTGGCCGCTACCAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGYRMSCRLQCSDVGPKSQPG*WPLPGV Trigger: TACTCCTGGTAGCGGCCATCATCCTGGCTGGGATTT...GGGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCAGCGTCGGACAGGCCTaGCTTGACAGGGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCSVGQA*LDRVLG Trigger: GCCCAGCACCCTGTCAAGGCAGGCCTGTCCGACGCT...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGCGGTGTAGGGCCGCCTaGAAGGTGAAGCTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLRCRAA*KVKLPL Trigger: CAGGGGCAGCTTCACCTTCCAGGCGGCCCTACACCG...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CCA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGATGCTGGAGGCAGGTTaGCAACGGGGTGAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQMLEAG*QRGELH Trigger: GTGGAGTTCACCCCGTTGCCAACCTGCCTCCAGCAT...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCGGGCCGCCTGGAAGGTaGAGCTGCCCCTGTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPRLLFSLLAHLRVKRGPPGR*SCPCPP Trigger: GGGAGGACAGGGGCAGCTTCACCTTCCAGGCGGCCC...GCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGCCGCTTTCCAGGTCTTGGACTTCGGAGATaGGTGGTCCGGAAGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSQSSLQSWRDGGRFPGLGLRR*VVRKAV Trigger: GACGGCCTTCCGGACCACTCATCTCCGAAGTCCAAG...ACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR GCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGGATGAAGCCTCCGGTTaGTATGGTGATCTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LITGSHARPACRVEAEGQDEASG*YGDLPQ Trigger: CTGCGGCAGATCACCATAGCAACCGGAGGCTTCATC...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAAGCGTCGGACAGGCCTaGCTTGACAGGGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQSVGQA*LDRVLG Trigger: GCCCAGCACCCTGTCAAGGCAGGCCTGTCCGACGCT...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGACGATGGTGCCCAGGTaGACGGGAGGACCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAECGNVNSQFPKLFAELTMVPR*TGGPLD Trigger: GTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGT...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCCGATACCCACGATGGTaGCCAGGTGCACGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCRYPRW*PGARED Trigger: GTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCG...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGGTGCTGGGCAGAGCTaGTATCCAGGACAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAECGNVNSQFPKLFAELGAGQS*YPGQPW Trigger: CCATGGCTGTCCTGGATATCAGCTCTGCCCAGCACC...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CCA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGTCCACCCACAGATCCTaGCTTTGTTTCTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQSTHRS*LCFSPG Trigger: CCCTGGTGAGAAACAAAGCCAGGATCTGTGGGTGGA...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCAGGGTACAGAATGAGCTGCAGGCTACAGTGCTCGGATGTTGGCCCCTATCCAGGACAGCCATaGGGATCTCTTTGTAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGYRMSCRLQCSDVGPYPGQP*GSLCSR Trigger: TCGGCTACAAAGAGATCCCCATGGCTGTCCTGGATA...GGGGCCAACATCCGAGCACTGTAGCCTGCAGCTCATTCTGTACCCTGCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGTGGTTGGGGTGGTTATaGAACTTCATGGCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LITGSHARPACRVEAEGQWLGWL*NFMAGQ Trigger: CTGGCCAGCCATGAAGTTCCATAACCACCCCAACCA...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR TCA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTCTCCGGTTGCTATGGTaGTCTGCCGCAGAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLLRLLW*SAAEDA Trigger: GGCATCCTCTGCGGCAGATCACCATAGCAACCGGAG...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTGGTGCTGGGCAGAGCTaGTATCCAGGACAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLGAGQS*YPGQPW Trigger: CCATGGCTGTCCTGGATATCAGCTCTGCCCAGCACC...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGCTGTCAGGGGAGGCTaGGTAGTGGCTATCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAECGNVNSQFPKLFAELAVRGG*VVAIIL Trigger: CAGGATGATAGCCACTACTCAGCCTCCCCTGACAGC...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR TCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAATGGCTGGCCAGTGGTaGGGTCTCCGCTCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQMAGQW*GLRSMK Trigger: CTTCATCGAGCGGAGACCTCACCACTGGCCAGCCAT...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAATCTATAGACCCCGGAATGCAATGGCCCAGTGTGGGCTTCAGTGAGCAGCTCCGACTCCAGCCTTaGCTGGTCCTCTTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LESIDPGMQWPSVGFSEQLRLQP*LVLLAV Trigger: GACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAG...CTGCTCACTGAAGCCCACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | GGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGAGGGGTGCCACATACTaGGTAGCTGTGAGCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNVNSQFPKLFAELERWRRGATY*VAVSIR Trigger: CCGGATGCTCACAGCTACGCAGTATGTGGCACCCCT...CCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCCGTTGGCCATCAGGGGTaGCACATACTGCGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRPLSRSRSLPPIPDFSAVGHQG*HILRSC Trigger: ACAGCTACGCAGTATGTGGCACCCCTGATGGCCAAC...GGCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR GCA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGAAGGCCGTCTCCTTCTaGGTAGGGATTCAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LITGSHARPACRVEAEGQKAVSF*VGIQLG Trigger: ACCAAGTTGAATCCCTACGCAGAAGGAGACGGCCTT...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAAGGGGTGCCACATACTaGGTAGCTGTGAGCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQRGATY*VAVSIR Trigger: CCGGATGCTCACAGCTACGCAGTATGTGGCACCCCT...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAGGGCACTGACTCCACCACTGGAACACCTCTaGAGGACATGGCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLQASKPQSLEPRALTPPLEHL*RTWHQL Trigger: CAGCTGGTGCCATGTCCTGCAGAGGTGTTCCAGTGG...TGGAGTCAGTGCCCTTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTGCATGTCTTGCCTTCTaGCTCCTGGGCACAGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLACLAF*LLGTAV Trigger: TACGGCTGTGCCCAGGAGGCAGAAGGCAAGACATGC...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAGACTCCAGCCTTGCCTaGTCCTCTTGGCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQDSSLA*SSWQSM Trigger: CATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTC...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | AGGCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHGGVQSLHCISWSKLLHPEVCR*PGSPHP Trigger: TGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGG...ATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAGCCTTGACAGGGTGCTaGGCAGAGCTGATATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQALTGC*AELISR Trigger: CCTGGATATCAGCTCTGCCCAGCACCCTGTCAAGGC...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAATGCTGGAGGCAGGTTaGCAACGGGGTGAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQMLEAG*QRGELH Trigger: GTGGAGTTCACCCCGTTGCCAACCTGCCTCCAGCAT...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTGGTTGGGGTGGTTATaGAACTTCATGGCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LERWRPLSRSRSLPPIPDWLGWL*NFMAGQ Trigger: CTGGCCAGCCATGAAGTTCCATAACCACCCCAACCA...ATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR TCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAACTTGAAGCCTGTCGGTaGGAACTGGAGAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQLEACR*ELERIL Trigger: CAGGATCCTCTCCAGTTCTCACCGACAGGCTTCAAG...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR TCA 90 bp | CTTGAATCTATAGACCCCGGAATGCAATGGCCCAGTGTGGGCTTCAGTGAGCAGCTTGAAGCCTGTCGGTaGGAACTGGAGAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LESIDPGMQWPSVGFSEQLEACR*ELERIL Trigger: CAGGATCCTCTCCAGTTCTCACCGACAGGCTTCAAG...CTGCTCACTGAAGCCCACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | TCTTCTGTAAGGCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAACTCCGACTCCAGCCTTaGCTGGTCCTCTTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRHGGVQSLHCISWSKLRLQP*LVLLAV Trigger: GACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAG...TTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGCCTTACAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATAAGGCCGTCTCCTTCTaGGTAGGGATTCAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LERWRPLSRSRSLPPIPDKAVSF*VGIQLG Trigger: ACCAAGTTGAATCCCTACGCAGAAGGAGACGGCCTT...ATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGCCGTCCTGGTCCACCACGGGGACAGAAGTCCCTTAAAACCAGGCTGTCCACCCACAGATCCTaGCTTTGTTTCTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRSRPGPPRGQKSLKTRLSTHRS*LCFSPG Trigger: CCCTGGTGAGAAACAAAGCCAGGATCTGTGGGTGGA...CAGCCTGGTTTTAAGGGACTTCTGTCCCCGTGGTGGACCAGGACGGCTTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR CCA 90 bp | CGGAGGGAAGGGATCCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAACACCTCTGCAGGACATaGCACCAGCTGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RREGIPFFRLLSHKVWSQHLCRT*HQLQLK Trigger: CTTCAACTGCAGCTGGTGCCATGTCCTGCAGAGGTG...TTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGGATCCCTTCCCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTCACCTCTGCAGGACATaGCACCAGCTGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLHLCRT*HQLQLK Trigger: CTTCAACTGCAGCTGGTGCCATGTCCTGCAGAGGTG...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CTGGAGAGATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATATCGGTCAAAGCCACTaGAACACCTCTGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LERWRPLSRSRSLPPIPDIGQSH*NTSAGH Trigger: ATGTCCTGCAGAGGTGTTCCAGTGGCTTTGACCGAT...ATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCATCTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR CCA 90 bp | AGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCTCTGCACGATACCCACGATaGTGCCCAGGTGCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRLLFSLLAHLRVKRSARYPR*CPGARE Trigger: CTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGC...AGAGCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAGGGCACTGACTCCAATGGAACTTCATGGCTaGCCAGTGGTGAGGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLQASKPQSLEPRALTPMELHG*PVVRSP Trigger: CGGAGACCTCACCACTGGCCAGCCATGAAGTTCCAT...TGGAGTCAGTGCCCTTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | GCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCCCTGCCTTGACAGGGTaGTGGGCAGAGCTGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPRLLFSLLAHLRVKRPALTG*WAELIS Trigger: GGATATCAGCTCTGCCCAGCACCCTGTCAAGGCAGG...GCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTCTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCTTATGGTTGTCCTCCTaGGGGGACAGAGACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEVSVPQGAFAVVLLSLWLSS*GDRDRA Trigger: GGCTCTGTCTCTGTCCCCGCAGGAGGACAACCATAA...GCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAGAGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | TCTCCTGGAGCAAATTACTTCATCTATCCTGGCAGAGGCCAGCAGCCTGTGAATCCTCCATGTCGGTTCTaGACTCACCACCACCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGANYFIYPGRGQQPVNPPCRF*THHHPS Trigger: ACTCGGGTGGTGGTGAGTGCAGAACCGACATGGAGG...ATTCACAGGCTGCTGGCCTCTGCCAGGATAGATGAAGTAATTTGCTCCAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| 3UTR CAA 72 bp | CGCTTCTTTGGGATGAAGGTGAGCTCTAGGTTTTCATaGTCCTTTAGAAGCCGTCCTGGTCCACCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RFFGMKVSSRFS*SFRSRPGPPRG Trigger: TCCCCGTGGTGGACCAGGACGGCTTCTAAAGGACAATGAAAACCTAGAGCTCACCTTCATCCCAAAGAAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR GCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGACGATGGTGCCCAGGTaGACGGGAGGACCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NASSPRLLFSLLAHLRVKTMVPR*TGGPLD Trigger: GTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGT...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | GCATGGTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTGACTCCAGCCTTGCCTaGTCCTCTTGGCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AWWSSEPALYLLEQITSSDSSLA*SSWQSM Trigger: CATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTC...AGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCACCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| CDS-3UTR CCA 90 bp | CCCCTTCTTCAGGCTTCTAAGCCACAAAGTTTGGAGCCAAGGGCACTGACTCCAATCGGTCAAAGCCACTaGAACACCTCTGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQASKPQSLEPRALTPIGQSH*NTSAGH Trigger: ATGTCCTGCAGAGGTGTTCCAGTGGCTTTGACCGAT...TGGAGTCAGTGCCCTTGGCTCCAAACTTTGTGGCTTAGAAGCCTGAAGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | GGAACTCTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCGGTTATGGAACTTCATaGCTGGCCAGTGGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEVSVPQGAFAVVLLSGYGTS*LASGEV Trigger: GACCTCACCACTGGCCAGCCATGAAGTTCCATAACC...GCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAGAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | GGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGGTAGAGTGGTTGGGGTaGTTATGGAACTTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNVNSQFPKLFAELERWRVEWLG*LWNFMA Trigger: AGCCATGAAGTTCCATAACCACCCCAACCACTCTAC...CCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR TCA 90 bp | AGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCTCTAAATCCCAGCCAGGATaGTGGCCGCTACCAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSPRLLFSLLAHLRVKRSKSQPG*WPLPGV Trigger: TACTCCTGGTAGCGGCCATCATCCTGGCTGGGATTT...AGAGCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | GCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCGGTTATGGAACTTCATaGCTGGCCAGTGGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPRLLFSLLAHLRVKRGYGTS*LASGEV Trigger: GACCTCACCACTGGCCAGCCATGAAGTTCCATAACC...GCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTCAGAGTAGCCGGGGTTaGAGTTGGCCATCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNEAKDQGQKNASSPRLLQSSRG*SWPSGV Trigger: CACCCCTGATGGCCAACTTCAACCCCGGCTACTCTG...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR TCA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTCTTGGACTTCGGAGATaGGTGGTCCGGAAGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NNEAKDQGQKNASSPRLLLGLRR*VVRKAV Trigger: GACGGCCTTCCGGACCACTCATCTCCGAAGTCCAAG...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGAGTCCTCGCATGTCTTaGCTTCTGCCTCCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NASSPRLLFSLLAHLRVKSPRMS*LLPPGH Trigger: GTGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACT...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTCCTGCCTTGACAGGGTaGTGGGCAGAGCTGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: NNEAKDQGQKNASSPRLLPALTG*WAELIS Trigger: GGATATCAGCTCTGCCCAGCACCCTGTCAAGGCAGG...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTCCACTGGAACACCTCTaGAGGACATGGCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNEAKDQGQKNASSPRLLPLEHL*RTWHQL Trigger: CAGCTGGTGCCATGTCCTGCAGAGGTGTTCCAGTGG...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTGTTGGCCATCAGGGGTaGCACATACTGCGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNEAKDQGQKNASSPRLLVGHQG*HILRSC Trigger: ACAGCTACGCAGTATGTGGCACCCCTGATGGCCAAC...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAGCACGATACCCACGATaGTGCCCAGGTGCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTARYPR*CPGARE Trigger: CTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGC...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAAGTCCTCGCATGTCTTaGCTTCTGCCTCCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTSPRMS*LLPPGH Trigger: GTGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACT...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAGCCTTGACAGGGTGCTaGGCAGAGCTGATATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTALTGC*AELISR Trigger: CCTGGATATCAGCTCTGCCCAGCACCCTGTCAAGGC...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGGTAGAGTGGTTGGGGTaGTTATGGAACTTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NASSPRLLFSLLAHLRVKVEWLG*LWNFMA Trigger: AGCCATGAAGTTCCATAACCACCCCAACCACTCTAC...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR GCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAGATGAAGCCTCCGGTTaGTATGGTGATCTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTDEASG*YGDLPQ Trigger: CTGCGGCAGATCACCATAGCAACCGGAGGCTTCATC...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACATATCCAGGACAGCCATaGGGATCTCTTTGTAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTYPGQP*GSLCSR Trigger: TCGGCTACAAAGAGATCCCCATGGCTGTCCTGGATA...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS TCA 90 bp | ATGCAGAGTCTTGACCTTCATTGTGACCTGCGGGTGTTGCGGGACTaGGCGCGCGCGCGGCCCCGCGGAGTAGCAGCAACTGCAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: MQSLDLHCDLRVLRD*ARARPRGVAATAAT Trigger: GGTTGCTGCAGTTGCTGCTACTCCGCGGGGCCGCGCGCGCGCTCAGTCCCGCAACACCCGCAGGTCACAATGAAGGTCAAGACTCTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS CCA 90 bp | TTGTCCGGAAGTGTGTCGATGGCCAGGGAGCCCCCACCCAAGTCCTaGCTTAGCTGGGTCTTGCCTGGCTTCAACACCTGCGCGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSVSMAREPPPKS*LSWVLPGFNTCAGL Trigger: GAGCCCCGCGCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS CCA 90 bp | GGTTGTCCTCCACCACCCGAGTCCTGTTGTCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCAAGTCCTGGCTTAGCTGGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPPPPESCCPEVCR*PGSPHPSPGLAGSC Trigger: GCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGAGGACAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS CCA 90 bp | GAGACAGAGCCACCACCCGAGTCCTGTTGTCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCAAGTCCTGGCTTAGCTGGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETEPPPESCCPEVCR*PGSPHPSPGLAGSC Trigger: GCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGCTCTGTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107565.3 |
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| CDS CCA 90 bp | CTGCACTCACCACCACCCGAGTCCTGTTGTCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCAAGTCCTGGCTTAGCTGGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHSPPPESCCPEVCR*PGSPHPSPGLAGSC Trigger: GCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGTGAGTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS CCA 90 bp | CGGGGCTCTCTCGGGGTCTCCGACTCCAGCCTTGCCTGGTCCTCTTaGCAGTCCATGCAGAGTCTTGACCTTCATTGTGACCTGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSLGVSDSSLAWSS*QSMQSLDLHCDLRV Trigger: CACCCGCAGGTCACAATGAAGGTCAAGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGACCCCGAGAGAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS CCA 90 bp | CAAGCACGATACCCACGATGGTGCCCAGGTGCACGGGAGGACCCTTaGACTTCGGAGATGAGTGGTCCGGAAGGCCGTCTCCTTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QARYPRWCPGAREDP*TSEMSGPEGRLLLR Trigger: ACGCAGAAGGAGACGGCCTTCCGGACCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS GCA 90 bp | GCTACCAGGAGTACAGCAAGCACGATACCCACGATGGTGCCCAGGTaGACGGGAGGACCCTTGGACTTCGGAGATGAGTGGTCCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATRSTASTIPTMVPR*TGGPLDFGDEWSGR Trigger: CCTTCCGGACCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTGCTGTACTCCTGGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CCA 90 bp | ACACCTGCGCGGGGCTCTCTCGGGGTCTCCGACTCCAGCCTTGCCTaGTCCTCTTGGCAGTCCATGCAGAGTCTTGACCTTCATTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPARGSLGVSDSSLA*SSWQSMQSLDLHCD Trigger: GTCACAATGAAGGTCAAGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGACCCCGAGAGAGCCCCGCGCAGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS GCA 90 bp | CGTGGAGTTGTCAGAGTAGCCGGGGTTGAAGTTGGCCATCAGGGGTaGCACATACTGCGTAGCTGTGAGCATCCGGTGGAGCATGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGVVRVAGVEVGHQG*HILRSCEHPVEHVP Trigger: GGGGACATGCTCCACCGGATGCTCACAGCTACGCAGTATGTGGCACCCCTGATGGCCAACTTCAACCCCGGCTACTCTGACAACTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CCA 90 bp | ATTCGAGGACACGCAGGTGTCGCAACTCTGATGCTGGAGGCAGGTTaGCAACGGGGTGAACTCCACGGCCGAGGTGGTGGTGATCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IRGHAGVATLMLEAG*QRGELHGRGGGDLA Trigger: AGCAAGATCACCACCACCTCGGCCGTGGAGTTCACCCCGTTGCCAACCTGCCTCCAGCATCAGAGTTGCGACACCTGCGTGTCCTCGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGGCACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGATCTCCGACTCCAGCCTaGCCTGGTCCTCTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVGTTSCCLVFLAQGQLRSPTPA*PGPLGS Trigger: ACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGA...TCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGTGCCAACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGAAGTCCTCGCATGTCTaGCCTTCTGCCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQKSSHV*PSASWA Trigger: TGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACTT...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS GCA 90 bp | GGGAGGCTGAGTAGTGGCTATCATCCTGGAAGTCCTCGCATGTCTTaGCTTCTGCCTCCTGGGCACAGCCGTAGGTCAGCCATTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSSGYHPGSPRMS*LLPPGHSRRSAILG Trigger: GCCAAGAATGGCTGACCTACGGCTGTGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACTTCCAGGATGATAGCCACTACTCAGCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTACTGGCAGCCATGCAAGACCAGCTTGCAGGGTGGAGGCTGAGGGGCAGCCACAGATCCTGGCTTaGTTTCTCACCAGGGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LITGSHARPACRVEAEGQPQILA*FLTRAV Trigger: TACGGCCCTGGTGAGAAACAAAGCCAGGATCTGTGG...CTGCCCCTCAGCCTCCACCCTGCAAGCTGGTCTTGCATGGCTGCCAGTAATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | ACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGAGGAAGCCAGGAGGTGGTGGTGATCTaGCTGGAGTCCAGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TTSCCLVFLAQGQLRGSQEVVVI*LESSST Trigger: TGTGGAACTGGACTCCAGCAAGATCACCACCACCTC...CTGGCTTCCTCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGCCGCTTTCCAGGTTGGCTTAGCTGGGTCTaGCCTGGCTTCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSQSSLQSWRDGGRFPGWLSWV*PGFNTC Trigger: GCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCA...ACCTGGAAAGCGGCCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGAGTGTGGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGCCTTGCCTGGTCCTCTaGGCAGTCCATGCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAECGNVNSQFPKLFAELPCLVL*AVHAES Trigger: AGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGG...CAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCCACACTCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCCCCACAGATCCTGGCTTaGTTTCTCACCAGGGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: WRPLSRSRSLPPIPDFSAPQILA*FLTRAV Trigger: TACGGCCCTGGTGAGAAACAAAGCCAGGATCTGTGG...GGCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGGCACCACAAGCTGTTGTCTTGTCTTCCTGGCCCAGGGCCAGCTCCGATGGCACCAGCTGCAGTaGAAGGTTAGATTCGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVGTTSCCLVFLAQGQLRWHQLQ*KVRFED Trigger: GTCCTCGAATCTAACCTTCAACTGCAGCTGGTGCCA...TCGGAGCTGGCCCTGGGCCAGGAAGACAAGACAACAGCTTGTGGTGCCAACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | CTTGAATCTATAGACCCCGGAATGCAATGGCCCAGTGTGGGCTTCAGTGAGCAGTGCACGGGAGGACCCTaGGACTTCGGAGATGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LESIDPGMQWPSVGFSEQCTGGP*DFGDEW Trigger: CCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCA...CTGCTCACTGAAGCCCACACTGGGCCATTGCATTCCGGGGTCTATAGATTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS TCA 90 bp | AGTGGAGTCGCCATTAAAGGGGCTGAAGGAGCTGTCAGGGGAGGCTaGGTAGTGGCTATCATCCTGGAAGTCCTCGCATGTCTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGVAIKGAEGAVRGG*VVAIILEVLACLAF Trigger: GAAGGCAAGACATGCGAGGACTTCCAGGATGATAGCCACTACTCAGCCTCCCCTGACAGCTCCTTCAGCCCCTTTAATGGCGACTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CCA 90 bp | GGTGAGAACTGGAGAGGATCCTGTGGATCTTCACATGACTCCGGTTaGCCACAGCCAGGTCCACCCACAGATCCTGGCTTTGTTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GENWRGSCGSSHDSG*PQPGPPTDPGFVSH Trigger: GTGAGAAACAAAGCCAGGATCTGTGGGTGGACCTGGCTGTGGCCAACCGGAGTCATGTGAAGATCCACAGGATCCTCTCCAGTTCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | CACTGTATCTCCTGGAGCAAATTACTTCATCTATCCTGGCAGAGGCCAGCAGCCTCTCCGACTCCAGCCTaGCCTGGTCCTCTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCISWSKLLHLSWQRPAASPTPA*PGPLGS Trigger: ACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGA...GGCTGCTGGCCTCTGCCAGGATAGATGAAGTAATTTGCTCCAGGAGATACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGTCAGTGTTCCCCAAGGAGCCTTCGCAGTTGTATTACTGAGCCCCCTTTGGCTTAGCTGGGTCTaGCCTGGCTTCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEVSVPQGAFAVVLLSPLWLSWV*PGFNTC Trigger: GCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCA...AAGGGGGCTCAGTAATACAACTGCGAAGGCTCCTTGGGGAACACTGACCTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCGAGGTGGTGGTGATCTaGCTGGAGTCCAGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCEVVVI*LESSST Trigger: TGTGGAACTGGACTCCAGCAAGATCACCACCACCTC...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS TCA 90 bp | CAAAGCCACTGGAACACCTCTGCAGGACATGGCACCAGCTGCAGTTaGAGGTTAGATTCGAGGACACGCAGGTGTCGCAACTCTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSHWNTSAGHGTSCS*RLDSRTRRCRNSDA Trigger: AGCATCAGAGTTGCGACACCTGCGTGTCCTCGAATCTAACCTTCAACTGCAGCTGGTGCCATGTCCTGCAGAGGTGTTCCAGTGGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CCA 90 bp | CTCGGTGTAGGTAGAGTGGTTGGGGTGGTTATGGAACTTCATGGCTaGCCAGTGGTGAGGTCTCCGCTCGATGAAGAAGAGTGCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGVGRVVGVVMELHG*PVVRSPLDEEECSI Trigger: AATGCTGCACTCTTCTTCATCGAGCGGAGACCTCACCACTGGCCAGCCATGAAGTTCCATAACCACCCCAACCACTCTACCTACACCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCTCTCCGACTCCAGCCTaGCCTGGTCCTCTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSPRLLFSLLAHLRVKRSPTPA*PGPLGS Trigger: ACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGA...GCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGGCCGCTTTCCAGGTCAAGGTCTCTCCCTCCCATACCAGATTTCTCTGCTGGCACCAGCTGCAGTaGAAGGTTAGATTCGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MEAAFQVKVSPSHTRFLCWHQLQ*KVRFED Trigger: GTCCTCGAATCTAACCTTCAACTGCAGCTGGTGCCA...GCAGAGAAATCTGGTATGGGAGGGAGAGACCTTGACCTGGAAAGCGGCCTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
||
| CDS TCA 90 bp | GTATTCGAAAATGGTCCGTCTCTGAGACGCTGGCACCTCTGGGGATaGATTGAGAATCATGAAAGCGTCGGACAGGCCTGCCTTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFENGPSLRRWHLWG*IENHESVGQACLDR Trigger: CCTGTCAAGGCAGGCCTGTCCGACGCTTTCATGATTCTCAATTCATCCCCAGAGGTGCCAGCGTCTCAGAGACGGACCATTTTCGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | GGGAACGTCAACTCCCAGTTCCCAAAGCTCTTTGCAGAGCTGGAGAGATGGAGGAAGAAGAGTGCAGCATaGGAATTAGGGTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GNVNSQFPKLFAELERWRKKSAA*ELGWPL Trigger: CAGTGGCCACCCTAATTCCAATGCTGCACTCTTCTT...CCTCCATCTCTCCAGCTCTGCAAAGAGCTTTGGGAACTGGGAGTTGACGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS TCA 90 bp | CTGGAGTCCAGTTCCACACGGTGGTATTCGAAAATGGTCCGTCTCTaGGACGCTGGCACCTCTGGGGATGAATTGAGAATCATGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LESSSTRWYSKMVRL*DAGTSGDELRIMKA Trigger: CGCTTTCATGATTCTCAATTCATCCCCAGAGGTGCCAGCGTCTCAGAGACGGACCATTTTCGAATACCACCGTGTGGAACTGGACTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTATCCTCCTTGCCTGGTCCTCTaGGCAGTCCATGCAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VEFRACTVSPGANYFIYPPCLVL*AVHAES Trigger: AGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGG...AGGATAGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| CDS-3UTR CAA 90 bp | AGTTCAGAGCCTGCACTGTATCTCCTGGAGCAAATTACTTCATCTATCCTGGCATGGCTTAGCTGGGTCTaGCCTGGCTTCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEPALYLLEQITSSILAWLSWV*PGFNTC Trigger: GCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCA...TGCCAGGATAGATGAAGTAATTTGCTCCAGGAGATACAGTGCAGGCTCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS-3UTR CAA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGTGCACGGGAGGACCCTaGGACTTCGGAGATGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NASSPRLLFSLLAHLRVKCTGGP*DFGDEW Trigger: CCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCA...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGAGCAAATTACTTCATCTATCCTGGCAGAGGCCAGCAGCCTGTGAATAGTCCATGCAGAGTCTaGACCTTCATTGTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGANYFIYPGRGQQPVNSPCRV*TFIVTC Trigger: GCAGGTCACAATGAAGGTCAAGACTCTGCATGGACT...ATTCACAGGCTGCTGGCCTCTGCCAGGATAGATGAAGTAATTTGCTCCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGGGATGAAGGTGAGCTCTAGGTTTTCATTGTCCTTTAGAAGCCGTCCTAAGTCCTCGCATGTCTaGCCTTCTGCCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FFGMKVSSRFSLSFRSRPKSSHV*PSASWA Trigger: TGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACTT...AGGACGGCTTCTAAAGGACAATGAAAACCTAGAGCTCACCTTCATCCCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017561.15 |
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| CDS-3UTR CAA 90 bp | AGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGCGCTCTAGTCCATGCAGAGTCTaGACCTTCATTGTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPRLLFSLLAHLRVKRSSPCRV*TFIVTC Trigger: GCAGGTCACAATGAAGGTCAAGACTCTGCATGGACT...AGAGCGCTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | AATGCAAGTTCCCCAAGGTTACTTTTCTCTCTGTTAGCGCATCTCAGGGTTAAGAGTCCATGCAGAGTCTaGACCTTCATTGTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NASSPRLLFSLLAHLRVKSPCRV*TFIVTC Trigger: GCAGGTCACAATGAAGGTCAAGACTCTGCATGGACT...CTTAACCCTGAGATGCGCTAACAGAGAGAAAAGTAACCTTGGGGAACTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | AACAATGAAGCAAAGGACCAAGGCCAGAAAAATGCAAGTTCCCCAAGGTTACTTACCTCTGGGGATGAATaGAGAATCATGAAAGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NNEAKDQGQKNASSPRLLTSGDE*RIMKAS Trigger: CGACGCTTTCATGATTCTCAATTCATCCCCAGAGGT...AAGTAACCTTGGGGAACTTGCATTTTTCTGGCCTTGGTCCTTTGCTTCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS-3UTR CAA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAAAGAAGAGTGCAGCATaGGAATTAGGGTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTKKSAA*ELGWPL Trigger: CAGTGGCCACCCTAATTCCAATGCTGCACTCTTCTT...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS-3UTR CAA 90 bp | CTAGTTGTTTTTAATGGTTACAAGAACTCGACTCTGGTCAGCCAAGTTAAAACAACCTCTGGGGATGAATaGAGAATCATGAAAGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVVFNGYKNSTLVSQVKTTSGDE*RIMKAS Trigger: CGACGCTTTCATGATTCTCAATTCATCCCCAGAGGT...TGTTTTAACTTGGCTGACCAGAGTCGAGTTCTTGTAACCATTAAAAACAACTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS GCA 72 bp | GGGAGCCCCCACCCAAGTCCTGGCTTAGCTGGGTCTTaGCTGGCTTCAACACCTGCGCGGGGCTCTCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPHPSPGLAGS*LASTPARGSLG Trigger: CCCGAGAGAGCCCCGCGCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS TCA 72 bp | CTTGACCTTCATTGTGACCTGCGGGTGTTGCGGGACTaGGCGCGCGCGCGGCCCCGCGGAGTAGCAGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LDLHCDLRVLRD*ARARPRGVAAT Trigger: AGTTGCTGCTACTCCGCGGGGCCGCGCGCGCGCTCAGTCCCGCAACACCCGCAGGTCACAATGAAGGTCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS GCA 72 bp | GGCAGTCCATGCAGAGTCTTGACCTTCATTGTGACCTaGGGGTGTTGCGGGACTGAGCGCGCGCGCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSPCRVLTFIVT*GCCGTERARGP Trigger: GGGGCCGCGCGCGCGCTCAGTCCCGCAACACCCGCAGGTCACAATGAAGGTCAAGACTCTGCATGGACTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS CAA 72 bp | AGGGAGCCCCCACCCAAGTCCTGGCTTAGCTGGGTCTaGCCTGGCTTCAACACCTGCGCGGGGCTCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: REPPPKSWLSWV*PGFNTCAGLSR Trigger: CCGAGAGAGCCCCGCGCAGGTGTTGAAGCCAGGCAAGACCCAGCTAAGCCAGGACTTGGGTGGGGGCTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
||
| CDS TCA 72 bp | GCCCAGGTGCACGGGAGGACCCTTGGACTTCGGAGATaGGTGGTCCGGAAGGCCGTCTCCTTCTGCGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQVHGRTLGLRR*VVRKAVSFCVG Trigger: CCCTACGCAGAAGGAGACGGCCTTCCGGACCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 90 bp | TTGTCCTCCTGCGGGGACAGAGACAGAGCCACCACCCGAGTCCTGTaGTCCGGAAGTGTGTCGATGGCCAGGGAGCCCCCACCCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSCGDRDRATTRVL*SGSVSMAREPPPKS Trigger: GGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGCTCTGTCTCTGTCCCCGCAGGAGGACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107565.3 |
||
| CDS CCA 72 bp | CCACCACCCGAGTCCTGTTGTCCGGAAGTGTGTCGATaGCCAGGGAGCCCCCACCCAAGTCCTGGCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPESCCPEVCR*PGSPHPSPGLA Trigger: AGCTAAGCCAGGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
||
| CDS CCA 72 bp | CACGCAGGTGTCGCAACTCTGATGCTGGAGGCAGGTTaGCAACGGGGTGAACTCCACGGCCGAGGTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HAGVATLMLEAG*QRGELHGRGGG Trigger: ACCACCACCTCGGCCGTGGAGTTCACCCCGTTGCCAACCTGCCTCCAGCATCAGAGTTGCGACACCTGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CAA 90 bp | GCAAGCACGATACCCACGATGGTGCCCAGGTGCACGGGAGGACCCTaGGACTTCGGAGATGAGTGGTCCGGAAGGCCGTCTCCTTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASTIPTMVPRCTGGP*DFGDEWSGRPSPSA Trigger: CGCAGAAGGAGACGGCCTTCCGGACCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CAA 90 bp | CTCTCCCTCCATGTCGGTTCTGCACTCACCACCACCCGAGTCCTGTaGTCCGGAAGTGTGTCGATGGCCAGGGAGCCCCCACCCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLHVGSALTTTRVL*SGSVSMAREPPPKS Trigger: GGACTTGGGTGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGTGAGTGCAGAACCGACATGGAGGGAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS CCA 72 bp | CCGCTACCAGGAGTACAGCAAGCACGATACCCACGATaGTGCCCAGGTGCACGGGAGGACCCTTGGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PLPGVQQARYPR*CPGAREDPWTS Trigger: CGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTGCTGTACTCCTGGTAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CAA 72 bp | CATGTCGGTTCTGCACTCACCACCACCCGAGTCCTGTaGTCCGGAAGTGTGTCGATGGCCAGGGAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HVGSALTTTRVL*SGSVSMAREPP Trigger: TGGGGGCTCCCTGGCCATCGACACACTTCCGGACAACAGGACTCGGGTGGTGGTGAGTGCAGAACCGACATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107564.2 |
||
| CDS GCA 72 bp | CTACCAGGAGTACAGCAAGCACGATACCCACGATGGTaGCCAGGTGCACGGGAGGACCCTTGGACTTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGVQQARYPRW*PGAREDPWTSE Trigger: CTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTGCTGTACTCCTGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
||
| CDS CAA 90 bp | CTTCAACACCTGCGCGGGGCTCTCTCGGGGTCTCCGACTCCAGCCTaGCCTGGTCCTCTTGGCAGTCCATGCAGAGTCTTGACCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LQHLRGALSGSPTPA*PGPLGSPCRVLTFI Trigger: AATGAAGGTCAAGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGACCCCGAGAGAGCCCCGCGCAGGTGTTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
||
| CDS GCA 72 bp | ATCATGAAAGCGTCGGACAGGCCTGCCTTGACAGGGTaGTGGGCAGAGCTGATATCCAGGACAGCCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: IMKASDRPALTG*WAELISRTAMG Trigger: CCCCATGGCTGTCCTGGATATCAGCTCTGCCCAGCACCCTGTCAAGGCAGGCCTGTCCGACGCTTTCATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS GCA 72 bp | AGTACAGCAAGCACGATACCCACGATGGTGCCCAGGTaGACGGGAGGACCCTTGGACTTCGGAGATGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: STASTIPTMVPR*TGGPLDFGDEW Trigger: CCACTCATCTCCGAAGTCCAAGGGTCCTCCCGTGCACCTGGGCACCATCGTGGGTATCGTGCTTGCTGTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CCA 72 bp | ATGAAAGCGTCGGACAGGCCTGCCTTGACAGGGTGCTaGGCAGAGCTGATATCCAGGACAGCCATGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: MKASDRPALTGC*AELISRTAMGI Trigger: GATCCCCATGGCTGTCCTGGATATCAGCTCTGCCCAGCACCCTGTCAAGGCAGGCCTGTCCGACGCTTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 72 bp | GTTGGCCACAGCCAGGTCCACCCACAGATCCTGGCTTaGTTTCTCACCAGGGCCGTAGACACGGGACACGTA | + |
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Preference number: 6 (lower is better) Translates to: VGHSQVHPQILA*FLTRAVDTGHV Trigger: TACGTGTCCCGTGTCTACGGCCCTGGTGAGAAACAAAGCCAGGATCTGTGGGTGGACCTGGCTGTGGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 90 bp | TGTCTTGCCTTCTGCCTCCTGGGCACAGCCGTAGGTCAGCCATTCTaGGCGGTATCGGTCAAAGCCACTGGAACACCTCTGCAGGACATG | + |
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Preference number: 6 (lower is better) Translates to: CLAFCLLGTAVGQPF*AVSVKATGTPLQDM Trigger: CATGTCCTGCAGAGGTGTTCCAGTGGCTTTGACCGATACCGCCAAGAATGGCTGACCTACGGCTGTGCCCAGGAGGCAGAAGGCAAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS GCA 72 bp | AGTAGTGGCTATCATCCTGGAAGTCCTCGCATGTCTTaGCTTCTGCCTCCTGGGCACAGCCGTAGGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSGYHPGSPRMS*LLPPGHSRRSA Trigger: GGCTGACCTACGGCTGTGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACTTCCAGGATGATAGCCACTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CCA 72 bp | CTCGGGGTCTCCGACTCCAGCCTTGCCTGGTCCTCTTaGCAGTCCATGCAGAGTCTTGACCTTCATTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LGVSDSSLAWSS*QSMQSLDLHCD Trigger: GTCACAATGAAGGTCAAGACTCTGCATGGACTGCCAAGAGGACCAGGCAAGGCTGGAGTCGGAGACCCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017561.15 ENSMUST00000107564.2 ENSMUST00000107565.3 |
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| CDS CAA 72 bp | TTCTGCCTCCTGGGCACAGCCGTAGGTCAGCCATTCTaGGCGGTATCGGTCAAAGCCACTGGAACACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FCLLGTAVGQPF*AVSVKATGTPL Trigger: CAGAGGTGTTCCAGTGGCTTTGACCGATACCGCCAAGAATGGCTGACCTACGGCTGTGCCCAGGAGGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 90 bp | ATGACTCCGGTTGGCCACAGCCAGGTCCACCCACAGATCCTGGCTTaGTTTCTCACCAGGGCCGTAGACACGGGACACGTAGTAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: MTPVGHSQVHPQILA*FLTRAVDTGHVVVM Trigger: CATAACTACTACGTGTCCCGTGTCTACGGCCCTGGTGAGAAACAAAGCCAGGATCTGTGGGTGGACCTGGCTGTGGCCAACCGGAGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 90 bp | TCTGGGGATGAATTGAGAATCATGAAAGCGTCGGACAGGCCTGCCTaGACAGGGTGCTGGGCAGAGCTGATATCCAGGACAGCCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGDELRIMKASDRPA*TGCWAELISRTAMG Trigger: CCCCATGGCTGTCCTGGATATCAGCTCTGCCCAGCACCCTGTCAAGGCAGGCCTGTCCGACGCTTTCATGATTCTCAATTCATCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS GCA 72 bp | GCTATCATCCTGGAAGTCCTCGCATGTCTTGCCTTCTaGCTCCTGGGCACAGCCGTAGGTCAGCCATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AIILEVLACLAF*LLGTAVGQPFL Trigger: CAAGAATGGCTGACCTACGGCTGTGCCCAGGAGGCAGAAGGCAAGACATGCGAGGACTTCCAGGATGATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CCA 72 bp | TGGAGAGGATCCTGTGGATCTTCACATGACTCCGGTTaGCCACAGCCAGGTCCACCCACAGATCCTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: WRGSCGSSHDSG*PQPGPPTDPGF Trigger: AAAGCCAGGATCTGTGGGTGGACCTGGCTGTGGCCAACCGGAGTCATGTGAAGATCCACAGGATCCTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS TCA 72 bp | GCCATTAAAGGGGCTGAAGGAGCTGTCAGGGGAGGCTaGGTAGTGGCTATCATCCTGGAAGTCCTCGCATGT | + |
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Preference number: 6 (lower is better) Translates to: AIKGAEGAVRGG*VVAIILEVLAC Trigger: ACATGCGAGGACTTCCAGGATGATAGCCACTACTCAGCCTCCCCTGACAGCTCCTTCAGCCCCTTTAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CCA 72 bp | GGTAGAGTGGTTGGGGTGGTTATGGAACTTCATGGCTaGCCAGTGGTGAGGTCTCCGCTCGATGAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GRVVGVVMELHG*PVVRSPLDEEE Trigger: CTCTTCTTCATCGAGCGGAGACCTCACCACTGGCCAGCCATGAAGTTCCATAACCACCCCAACCACTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 72 bp | CTGGAACACCTCTGCAGGACATGGCACCAGCTGCAGTaGAAGGTTAGATTCGAGGACACGCAGGTGTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: LEHLCRTWHQLQ*KVRFEDTQVSQ Trigger: TTGCGACACCTGCGTGTCCTCGAATCTAACCTTCAACTGCAGCTGGTGCCATGTCCTGCAGAGGTGTTCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS TCA 72 bp | CCCATAGAAAGGGAAATCAAAGGACAAGACCACTCTTaGAGCCTGTCGGTGAGAACTGGAGAGGATCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PIEREIKGQDHS*SLSVRTGEDPV Trigger: CACAGGATCCTCTCCAGTTCTCACCGACAGGCTTCAAGAGTGGTCTTGTCCTTTGATTTCCCTTTCTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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| CDS CAA 72 bp | GCCCATAGAAAGGGAAATCAAAGGACAAGACCACTCTaGAAGCCTGTCGGTGAGAACTGGAGAGGATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: AHRKGNQRTRPL*KPVGENWRGSC Trigger: ACAGGATCCTCTCCAGTTCTCACCGACAGGCTTCAAGAGTGGTCTTGTCCTTTGATTTCCCTTTCTATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017561.15 ENSMUST00000107565.3 |
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