Pregenerated sensors for PLVAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034845Ensembl transcript IDs: ENSMUST00000048452.6
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTaGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCC | + |
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Preference number: 1 (lower is better) Translates to: GGCRQARRVSSTVGT*LPPSTGGRFWHPAS Trigger: GGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 90 bp | ATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTaGTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: IGNRRSCLGWQLSCG*FMCGWGTIRVTAQG Trigger: CCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR TCA 90 bp | ACCCTAGTGGCCTTTAAGAGGGAGGCTGGAAACTCCCAAGGGAGCTaGAGGCTGGGCTTCCTGTTCTCACCTCCCGGGTCAGGAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: TLVAFKREAGNSQGS*RLGFLFSPPGSGAE Trigger: CTCTGCTCCTGACCCGGGAGGTGAGAACAGGAAGCCCAGCCTTCAGCTCCCTTGGGAGTTTCCAGCCTCCCTCTTAAAGGCCACTAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 90 bp | AGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTaGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACA | + |
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Preference number: 1 (lower is better) Translates to: SDRKPEELPRVAAEL*VLHVWVGHHPGHCT Trigger: TGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 90 bp | GAGCTGTGGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTaGACAAGGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: ELWVLHVWVGHHPGH*TRGRCEVISQLCVP Trigger: AGGCACACACAGCTGTGAGATGACTTCACATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 90 bp | TGGCCTTTAAGAGGGAGGCTGGAAACTCCCAAGGGAGCTGAAGGCTaGGCTTCCTGTTCTCACCTCCCGGGTCAGGAGCAGAGTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: WPLRGRLETPKGAEG*ASCSHLPGQEQSDR Trigger: CCTATCACTCTGCTCCTGACCCGGGAGGTGAGAACAGGAAGCCCAGCCTTCAGCTCCCTTGGGAGTTTCCAGCCTCCCTCTTAAAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR TCA 90 bp | TGTGTGGGTGGGGCACCATCCGGGTCACTGCACAAGGGGTCGATGTaGAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CVGGAPSGSLHKGSM*SHLTAVCALNPVSG Trigger: CCCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTGTGGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACAACTGTGGGCACCTGGCTaGCCCCATCCACAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSCGCFMCGWGTIRVTAQLWAPG*PHPQVG Trigger: GCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAG...TTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTGCTTAGCACTGTGGGCACCTaGCTGCCCCCATCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SDRKPEELPRVAAELWVLSTVGT*LPPSTG Trigger: ACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCT...AAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGGGGAGGCCTGGAGACTCTCAAATAGGATCTGGAAACCCTAGTGGCCTTAGGAGTTGCCTAGGGTaGCAGCTGAGCTGTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LQGRPGDSQIGSGNPSGLRSCLG*QLSCGC Trigger: GCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCT...AAGGCCACTAGGGTTTCCAGATCCTATTTGAGAGTCTCCAGGCCTCCCCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGCCCTTCCTTGTGAGGAGGAGGGGAACCAGCGGACTCTGGAAAAGACTTCCTTCAGGGGAGGCCTaGAGACTCTCAAATAGGATC | + |
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Preference number: 2 (lower is better) Translates to: LRPFLVRRRGTSGLWKRLPSGEA*RLSNRI Trigger: GATCCTATTTGAGAGTCTCCAGGCCTCCCCTGAAGG...AAGTCTTTTCCAGAGTCCGCTGGTTCCCCTCCTCCTCACAAGGAAGGGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 72 bp | GTGAAGGGGTGCCAGAGAAGGCGTGGGGGTGGAGGCTaGCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: VKGCQRRRGGGG*RQARRVSSTVG Trigger: GCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCCACCCCCACGCCTTCTCTGGCACCCCTTCAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 72 bp | GAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTaGGCACCTGGCTGCCCCCATCCACAGGTGGGCGAT | + |
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Preference number: 3 (lower is better) Translates to: EAAGRHGGCPAL*APGCPHPQVGD Trigger: ATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 72 bp | CGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTaGCTGCCCCCATCCACAGGTGGGCGATTCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RQARRVSSTVGT*LPPSTGGRFWH Trigger: GTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 72 bp | AGGCACGGCGGGTGTCCAGCACTGTGGGCACCTGGCTaGCCCCATCCACAGGTGGGCGATTCTGGCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RHGGCPALWAPG*PHPQVGDSGTQ Trigger: CTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 72 bp | CAGCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTaGGCGATTCTGGCACCCAGCGTCCTGCGGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: QHCGHLAAPIHR*AILAPSVLRQL Trigger: CAGCTGCCGCAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 72 bp | CGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTaGTTCATGTGTGGGTGGGGCACCATCCGGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: RRSCLGWQLSCG*FMCGWGTIRVT Trigger: AGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CCA 72 bp | CCTAGGGTGGCAGCTGAGCTGTGGGTGCTTCATGTGTaGGTGGGGCACCATCCGGGTCACTGCACAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: PRVAAELWVLHV*VGHHPGHCTRG Trigger: ACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAGCTGCCACCCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR GCA 72 bp | GTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTaGACAAGGGGTCGATGTGAAGTCATCTCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLHVWVGHHPGH*TRGRCEVISQL Trigger: CAGCTGTGAGATGACTTCACATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR TCA 72 bp | GGGGCACCATCCGGGTCACTGCACAAGGGGTCGATGTaGAGTCATCTCACAGCTGTGTGTGCCTTAAATCCA | + |
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Preference number: 3 (lower is better) Translates to: GAPSGSLHKGSM*SHLTAVCALNP Trigger: TGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCCCCCGTGCGGGCGTATaGGCTGCGGTCCATGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGCRQARRVSSTVGTWLPPRAGV*AAVHGE Trigger: CTCTCCATGGACCGCAGCCCATACGCCCGCACGGGG...GGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCC 73% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | GGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGTGGGTTTCTCGCGCCTaGGCCTCGGTCCCGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GHLAAPIHRWAILAPSVLWVSRA*ASVPAR Trigger: GCGCGCCGGGACCGAGGCGCAGGCGCGAGAAACCCA...CAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | CGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGGGCGAAGCTGGATCAATGGGTaGAGGGTTCGGGGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRVSSTVGTWLPPSTGGRSWING*RVRGWA Trigger: GGCCCACCCCCGAACCCTCCACCCATTGATCCAGCT...TCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATCCTCGGTCACCTGCTaGTCCTGCTGTTGCCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: RRVSSTVGTWLPPSTGGRSSVTC*SCCCLS Trigger: CGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGA...TCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGAGGTCGCCTTGGCACTaGCGGAAGCTGGCGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: ALWAPGCPHPQVGDSGTQRSPWH*RKLALM Trigger: CATCAACGCCAGCTTCCGCCAGTGCCAAGGCGACCT...CTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGGCCTGGAACTTCTCCTaGTCCAGTGGGATGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GHLAAPIHRWAILAPSVLAWNFS*SSGMHR Trigger: CCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGC...CAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | GGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGCTTCTCCTCGGTCACCTaGTGCTCCTGCTGTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GTWLPPSTGGRFWHPASCFSSVT*CSCCCL Trigger: AAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAA...GCAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCTCAGCACGTCCGCCTaGAACTTCTCCTGGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ALWAPGCPHPQVGDSGTQLSTSA*NFSWSS Trigger: ACTGGACCAGGAGAAGTTCCAGGCGGACGTGCTGAG...CTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGTCAGGAGCAGAGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCCTTTCGCGTGCTTTaGCACAGGCCTCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPGQEQSDRKPEELPRVAAFRVL*HRPPAA Trigger: AGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGC...TGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACTCTGCTCCTGACCCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | GCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGCGTAGTCAACAGTTaGTGCATGACTGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ALWAPGCPHPQVGDSGTQRVVNS*CMTVSL Trigger: CAAGGAAACAGTCATGCAGCAACTGTTGACTACGCG...CTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CTGAGCTGTGGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACAAGTCCTTGGAGCACACTaGCTTCTCCTTGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LSCGCFMCGWGTIRVTAQVLGAH*LLLGHL Trigger: GAGGTGGCCAAGGAGAAGGCAGTGTGCTCCAAGGAC...TTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCCACAGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACAAGGGGTCGATGGCTCTCCTTGTCCTTaGAGCACACTGCCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GCFMCGWGTIRVTAQGVDGSPCP*STLPSP Trigger: AGGAGAAGGCAGTGTGCTCCAAGGACAAGGAGAGCC...ATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGTCAGGAGCAGAGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCACTTCTCCTGGTCCAGTaGGATGCACAGGGACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LPGQEQSDRKPEELPRVALLLVQ*DAQGLH Trigger: GTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAG...TGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACTCTGCTCCTGACCCGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CAA 72 bp | CCGGGTCAGGAGCAGAGTGATAGGAAACCGGAGGAGTaGCCTAGGGTGGCAGCTGAGCTGTGGGTGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PGQEQSDRKPEE*PRVAAELWVLH Trigger: ATGAAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACTCTGCTCCTGACCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR TCA 90 bp | CTCCCGGGTCAGGAGCAGAGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCACTTCGCAGGTCTTGTTaGCCTCCTTCAGCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPGQEQSDRKPEELPRVALRRSC*PPSAVP Trigger: AGGAACAGCTGAAGGAGGTCAACAAGACCTGCGAAG...TGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACTCTGCTCCTGACCCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGGGGAGGCCTGGAGACTCTCAAATAGGATCTGGAAACCCTAGTGGCCTTAGCTGCTCTTCCGCCTaGCGCTTTCCTGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQGRPGDSQIGSGNPSGLSCSSA*RFPASR Trigger: CCTGCTGGCAGGAAAGCGGCAGGCGGAAGAGCAGCT...AAGGCCACTAGGGTTTCCAGATCCTATTTGAGAGTCTCCAGGCCTCCCCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | AGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTGCTTGTCACCTGCTGCTCCTaGTGTTGCCTTTCGCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SDRKPEELPRVAAELWVLVTCCS*CCLSRA Trigger: AGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGAC...AAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGGGGAGGCCTGGAGACTCTCAAATAGGATCTGGAAACCCTAGTGGCCTTCTGGCGCCGCAGTTCTaGATTCTCACGGGTCACGCG | + |
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Preference number: 4 (lower is better) Translates to: LQGRPGDSQIGSGNPSGLLAPQF*ILTGHA Trigger: CGCGTGACCCGTGAGAATGCAGAACTGCGGCGCCAG...AAGGCCACTAGGGTTTCCAGATCCTATTTGAGAGTCTCCAGGCCTCCCCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGGGGAGGCCTGGAGACTCTCAAATAGGATCTGGAAACCCTAGTGGCCTTGCACATCCACCTCGGTaGGCAGTTGCTCCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LQGRPGDSQIGSGNPSGLAHPPR*AVAPAP Trigger: GGGAGCTGGAGCAACTGCGCACCGAGGTGGATGTGC...AAGGCCACTAGGGTTTCCAGATCCTATTTGAGAGTCTCCAGGCCTCCCCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | GGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGCCACAGGCCTCCAGCTaGTCTTCCGCCTGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GVDVKSSHSCVCLKSSVWPQASS*SSACRF Trigger: AAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGG...CCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGGTGATCAGGTCGCCTTaGCACTGGCGGAAGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: GVDVKSSHSCVCLKSSVWVIRSP*HWRKLA Trigger: CGCCAGCTTCCGCCAGTGCCAAGGCGACCTGATCAC...CCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| 3UTR CAA 72 bp | AGGGCTCTAAGATCCACCCGGAACGCTCATCTACAATaGAGGCCCTTCCTTGTGAGGAGGAGGGGAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RALRSTRNAHLQ*RPFLVRRRGTS Trigger: GCTGGTTCCCCTCCTCCTCACAAGGAAGGGCCTCAATTGTAGATGAGCGTTCCGGGTGGATCTTAGAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR TCA 90 bp | ATTGAGGCCCTTCCTTGTGAGGAGGAGGGGAACCAGCGGACTCTGGAAAAGACTCATTGCCATAGATCATaGAGAGGACCAGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IEALPCEEEGNQRTLEKTHCHRS*RGPGPG Trigger: TCCTGGGCCTGGTCCTCTTCATGATCTATGGCAATG...AGTCTTTTCCAGAGTCCGCTGGTTCCCCTCCTCCTCACAAGGAAGGGCCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR GCA 90 bp | AGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTGCTTAGCTGTTCCTGGCACTaGTTCTCGCTCAGGATGATA | + |
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Preference number: 4 (lower is better) Translates to: SDRKPEELPRVAAELWVLSCSWH*FSLRMI Trigger: TATCATCCTGAGCGAGAAGCAGTGCCAGGAACAGCT...AAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR TCA 90 bp | GGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGACTACAGGGAGCCGCTaGGACTCCAGGATCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GVDVKSSHSCVCLKSSVWTTGSR*DSRILF Trigger: GAAAAGGATCCTGGAGTCTCAGCGGCTCCCTGTAGT...CCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR CCA 90 bp | GGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGTCCTTCAGCTGTTCCTaGCACTGCTTCTCGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GVDVKSSHSCVCLKSSVWSFSCS*HCFSLR Trigger: CCTGAGCGAGAAGCAGTGCCAGGAACAGCTGAAGGA...CCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR TCA 90 bp | AGTGATAGGAAACCGGAGGAGTTGCCTAGGGTGGCAGCTGAGCTGTGGGTGCTTTATAGTTTATGTAGGTaGTCAGGTCGCCTTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: SDRKPEELPRVAAELWVLYSLCR*SGRLGT Trigger: AGTGCCAAGGCGACCTGATCACCTACATAAACTATA...AAGCACCCACAGCTCAGCTGCCACCCTAGGCAACTCCTCCGGTTTCCTATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS-3UTR TCA 90 bp | GCACAAGGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTAGGATGATGAGGAACTaGATGAGCGACACGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGVDVKSSHSCVCLKSSRMMRN*MSDTKR Trigger: CCTCTTCGTGTCGCTCATTCAGTTCCTCATCATCCT...ACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCCTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | AGGCGTGGGGGTGGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCCACCTCGGTGCGCAGTaGCTCCAGCTCCCGCTTACG | + |
|
Preference number: 5 (lower is better) Translates to: RRGGGGCRQARRVSSTVGHLGAQ*LQLPLT Trigger: CGTAAGCGGGAGCTGGAGCAACTGCGCACCGAGGTG...GCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCCACCCCCACGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS TCA 90 bp | TGCCGGCGCGCAGCCCGCGGGCCAGCTCTTCTATCTTGGTGGTCATaGTCCCGGGCAGGCTCTCGCAGGTCCGACGGAGGGACGCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CRRAARGPALLSWWS*SRAGSRRSDGGTRT Trigger: AGTACGCGTCCCTCCGTCGGACCTGCGAGAGCCTGCCCGGGATCATGACCACCAAGATAGAAGAGCTGGCCCGCGGGCTGCGCGCCGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGGGTGATCAGGTCGCCTaGGCACTGGCGGAAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHLAAPIHRWAILAPSVLGDQVA*ALAEAG Trigger: GCCAGCTTCCGCCAGTGCCAAGGCGACCTGATCACC...CAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCAGGCTCTCCTTGTCCTaGGAGCACACTGCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGCRQARRVSSTVGTWLPRLSLS*EHTAFS Trigger: GGAGAAGGCAGTGTGCTCCAAGGACAAGGAGAGCCT...GGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | CAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCCCATCCACAGGTGCCAGCAGGCTCTCCTaGTCCTTGGAGCACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QARRVSSTVGTWLPPSTGASRLS*SLEHTA Trigger: GGCAGTGTGCTCCAAGGACAAGGAGAGCCTGCTGGC...ACCTGTGGATGGGGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGCTGCCTTTCGCGTGCTTaGCCACAGGCCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTWLPPSTGGRFWHPASCCLSRA*PQASSC Trigger: GCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCA...GCAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | CCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGCGGCAGCTGGGTCCACAGGGACTGCACCTaGCGCAGGTTCTCCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSTGGRFWHPASCGSWVHRDCT*RRFSSV Trigger: GACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTG...GACCCAGCTGCCGCAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGGCACCTGGCTGCCCCCATCCACAGGTGGGCGATTCTGGCACCCAGCGTCCTGTGGCGGAAGCTGGCGTaGATGCGCTCCATCTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GHLAAPIHRWAILAPSVLWRKLA*MRSISR Trigger: ACGTGAGATGGAGCGCATCAACGCCAGCTTCCGCCA...CAGGACGCTGGGTGCCAGAATCGCCCACCTGTGGATGGGGGCAGCCAGGTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | ACTTCTGGCGCCGCAGTTCTGCATTCTCACGGGTCACGCGCTCAATaGCGGCGCGCAGCCCGCGGGCCAGCTCTTCTATCTTGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSGAAVLHSHGSRAQ*RRAARGPALLSWWS Trigger: TGACCACCAAGATAGAAGAGCTGGCCCGCGGGCTGCGCGCCGGCATTGAGCGCGTGACCCGTGAGAATGCAGAACTGCGGCGCCAGAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 90 bp | CCGCCACGCACTCAGCACGTCCGCCTGGAACTTCTCCTGGTCCAGTaGGATGCACAGGGACTGCACCTTGCGCAGGTTCTCCTCGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPRTQHVRLELLLVQ*DAQGLHLAQVLLGH Trigger: GTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGTGCTGAGTGCGTGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | AGGCGTGGGGGTGGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCTCGCGTAGTCAACAGTaGCTGCATGACTGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRGGGGCRQARRVSSTVGSRSQQ*LHDCFL Trigger: AAGGAAACAGTCATGCAGCAACTGTTGACTACGCGA...GCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCCACCCCCACGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | TCTCCTCGGTCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTGCTTTaGCACAGGCCTCCAGCTGCTCTTCCGCCTGCCGCTTTCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRSPAAPAVAFRVL*HRPPAALPPAAFLP Trigger: TGGCAGGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | CAGGTTCTCCTCGGTCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTaGTTTGCCACAGGCCTCCAGCTGCTCTTCCGCCTGCCGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLLGHLLLLLLPFA*FATGLQLLFRLPLS Trigger: GGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | GGGATGCACAGGGACTGCACCTTGCGCAGGTTCTCCTCGGTCACCTaGTGCTCCTGCTGTTGCCTTTCGCGTGCTTTGCCACAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMHRDCTLRRFSSVT*CSCCCLSRALPQAS Trigger: GGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGCCGGCAGGCACGGCGGGTGTCCAGCACTGTGGGCACCTGGCTGCCCACTTTTTCTCCCAGCTaGAAGAGTAAAGCTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGCRQARRVSSTVGTWLPTFSPS*KSKASQ Trigger: CTGCGAAGCTTTACTCTTCAAGCTGGGAGAAAAAGT...GGGCAGCCAGGTGCCCACAGTGCTGGACACCCGCCGTGCCTGCCGGCAGCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | AGGGACTGCACCTTGCGCAGGTTCTCCTCGGTCACCTGCTGCTCCTaGTGTTGCCTTTCGCGTGCTTTGCCACAGGCCTCCAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDCTLRRFSSVTCCS*CCLSRALPQASSCS Trigger: AGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | ACGTCCGCCTGGAACTTCTCCTGGTCCAGTGGGATGCACAGGGACTaGACCTTGCGCAGGTTCTCCTCGGTCACCTGCTGCTCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSAWNFSWSSGMHRD*TLRRFSSVTCCSCC Trigger: ACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | ACGCACTCAGCACGTCCGCCTGGAACTTCTCCTGGTCCAGTGGGATaGACAGGGACTGCACCTTGCGCAGGTTCTCCTCGGTCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: THSARPPGTSPGPVG*TGTAPCAGSPRSPA Trigger: AGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGTGCTGAGTGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 90 bp | ATAGTCCAACCACCTGGCTGTACAGGCTGTCGGCGCGGATCTCCGTaGCGCGCAGGCTGGACTCAGTGGTGGCGTGCACATTGCCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: IVQPPGCTGCRRGSP*RAGWTQWWRAHCHR Trigger: TCTATGGCAATGTGCACGCCACCACTGAGTCCAGCCTGCGCGCCACGGAGATCCGCGCCGACAGCCTGTACAGCCAGGTGGTTGGACTAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 90 bp | GCTCTTCCGCCTGCCGCTTTCCTGCCAGCAGGCTCTCCTTGTCCTTaGAGCACACTGCCTTCTCCTTGGCCACCTCCATCTCCAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALPPAAFLPAGSPCP*STLPSPWPPPSPVS Trigger: AGACACTGGAGATGGAGGTGGCCAAGGAGAAGGCAGTGTGCTCCAAGGACAAGGAGAGCCTGCTGGCAGGAAAGCGGCAGGCGGAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTTCATGTGTGGGTGGGGCACCATCCGGGTCACTGCACAAGGGGTCGATTCCAGGATCCTTTTCTaGAATTCCTCCAGGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GCFMCGWGTIRVTAQGVDSRILF*NSSRLA Trigger: AGCTAGCCTGGAGGAATTCAAGAAAAGGATCCTGGA...ATCGACCCCTTGTGCAGTGACCCGGATGGTGCCCCACCCACACATGAAGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | CTGCCGCTTTCCTGCCAGCAGGCTCTCCTTGTCCTTGGAGCACACTaGCTTCTCCTTGGCCACCTCCATCTCCAGTGTCTTAACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSCQQALLVLGAH*LLLGHLHLQCLNFF Trigger: GAAAAAGTTAAGACACTGGAGATGGAGGTGGCCAAGGAGAAGGCAGTGTGCTCCAAGGACAAGGAGAGCCTGCTGGCAGGAAAGCGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS-3UTR CAA 90 bp | GGGGTCGATGTGAAGTCATCTCACAGCTGTGTGTGCCTTAAATCCAGTGTCTGGCTGCTGCTCCTGCTGTaGCCTTTCGCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVDVKSSHSCVCLKSSVWLLLLL*PFACFA Trigger: GGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAG...CCAGACACTGGATTTAAGGCACACACAGCTGTGAGATGACTTCACATCGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 90 bp | AAGCTGGCGTTGATGCGCTCCATCTCACGTCGCGTAGTCAACAGTTaGTGCATGACTGTTTCCTTGACAAGCAAGCTGATGTTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLALMRSISRRVVNS*CMTVSLTSKLMFSC Trigger: ACAGCTGAACATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGAGCGCATCAACGCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 90 bp | AAGAGTAAAGCTTCGCAGGTCTTGTTGACCTCCTTCAGCTGTTCCTaGCACTGCTTCTCGCTCAGGATGATAGCGGCGATGAAGCGATTA | + |
|
Preference number: 5 (lower is better) Translates to: KSKASQVLLTSFSCS*HCFSLRMIAAMKRL Trigger: TAATCGCTTCATCGCCGCTATCATCCTGAGCGAGAAGCAGTGCCAGGAACAGCTGAAGGAGGTCAACAAGACCTGCGAAGCTTTACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 72 bp | GCCAGCTGCGTCTGGCGCGCGCACTCCGCCCGTAGCTaGGTTTCTCGCGCCTGCGCCTCGGTCCCGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASCVWRAHSARS*VSRACASVPAR Trigger: GCGCGCCGGGACCGAGGCGCAGGCGCGAGAAACCCAGCTACGGGCGGAGTGCGCGCGCCAGACGCAGCTGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 90 bp | ACGCGCTCAATGCCGGCGCGCAGCCCGCGGGCCAGCTCTTCTATCTaGGTGGTCATGATCCCGGGCAGGCTCTCGCAGGTCCGACGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRSMPARSPRASSSI*VVMIPGRLSQVRRR Trigger: CCTCCGTCGGACCTGCGAGAGCCTGCCCGGGATCATGACCACCAAGATAGAAGAGCTGGCCCGCGGGCTGCGCGCCGGCATTGAGCGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS TCA 72 bp | GCAGCCCGCGGGCCAGCTCTTCTATCTTGGTGGTCATaGTCCCGGGCAGGCTCTCGCAGGTCCGACGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AARGPALLSWWS*SRAGSRRSDGG Trigger: CCCTCCGTCGGACCTGCGAGAGCCTGCCCGGGATCATGACCACCAAGATAGAAGAGCTGGCCCGCGGGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 72 bp | CCACCTGGCTGTACAGGCTGTCGGCGCGGATCTCCGTaGCGCGCAGGCTGGACTCAGTGGTGGCGTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PPGCTGCRRGSP*RAGWTQWWRAH Trigger: ATGTGCACGCCACCACTGAGTCCAGCCTGCGCGCCACGGAGATCCGCGCCGACAGCCTGTACAGCCAGGTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 72 bp | ATGCCGGCGCGCAGCCCGCGGGCCAGCTCTTCTATCTaGGTGGTCATGATCCCGGGCAGGCTCTCGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MPARSPRASSSI*VVMIPGRLSQV Trigger: GACCTGCGAGAGCCTGCCCGGGATCATGACCACCAAGATAGAAGAGCTGGCCCGCGGGCTGCGCGCCGGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | GCCGCAGTTCTGCATTCTCACGGGTCACGCGCTCAATaGCGGCGCGCAGCCCGCGGGCCAGCTCTTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: AAVLHSHGSRAQ*RRAARGPALLS Trigger: AGATAGAAGAGCTGGCCCGCGGGCTGCGCGCCGGCATTGAGCGCGTGACCCGTGAGAATGCAGAACTGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 72 bp | GTCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTGCTTaGCCACAGGCCTCCAGCTGCTCTTCCGCCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VTCCSCCCLSRA*PQASSCSSACR Trigger: GCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | ACAGGCCTCCAGCTGCTCTTCCGCCTGCCGCTTTCCTaGCAGCAGGCTCTCCTTGTCCTTGGAGCACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGLQLLFRLPLS*QQALLVLGAHC Trigger: GCAGTGTGCTCCAAGGACAAGGAGAGCCTGCTGGCAGGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | CGTGCTTTGCCACAGGCCTCCAGCTGCTCTTCCGCCTaGCGCTTTCCTGCCAGCAGGCTCTCCTTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RALPQASSCSSA*RFPASRLSLSL Trigger: CAAGGACAAGGAGAGCCTGCTGGCAGGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | TGTTGCCTTTCGCGTGCTTTGCCACAGGCCTCCAGCTaGTCTTCCGCCTGCCGCTTTCCTGCCAGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCLSRALPQASS*SSACRFPASRL Trigger: GAGCCTGCTGGCAGGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | TCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTGCTTTaGCACAGGCCTCCAGCTGCTCTTCCGCCTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPAAPAVAFRVL*HRPPAALPPAA Trigger: AGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | CTCGGTCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTaGTTTGCCACAGGCCTCCAGCTGCTCTTCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGHLLLLLLPFA*FATGLQLLFRL Trigger: CAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | CGCAGGTTCTCCTCGGTCACCTGCTGCTCCTGCTGTTaGCTTTCGCGTGCTTTGCCACAGGCCTCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRFSSVTCCSCC*LSRALPQASSC Trigger: GCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | GCACGTCCGCCTGGAACTTCTCCTGGTCCAGTGGGATaGACAGGGACTGCACCTTGCGCAGGTTCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARPPGTSPGPVG*TGTAPCAGSPR Trigger: CCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 72 bp | ACAGGCTGTCGGCGCGGATCTCCGTGGCGCGCAGGCTaGACTCAGTGGTGGCGTGCACATTGCCATAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: TGCRRGSPWRAG*TQWWRAHCHRS Trigger: TGATCTATGGCAATGTGCACGCCACCACTGAGTCCAGCCTGCGCGCCACGGAGATCCGCGCCGACAGCCTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 72 bp | ATCAGCGAGTCCCGCCACGCACTCAGCACGTCCGCCTaGAACTTCTCCTGGTCCAGTGGGATGCACAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISESRHALSTSA*NFSWSSGMHRD Trigger: GTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGTGCTGAGTGCGTGGCGGGACTCGCTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 72 bp | GCGCAGGTTCTCCTCGGTCACCTGCTGCTCCTGCTGTaGCCTTTCGCGTGCTTTGCCACAGGCCTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AQVLLGHLLLLL*PFACFATGLQL Trigger: CAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 90 bp | TTCTCCTCGGTCACCTGCTGCTCCTGCTGTTGCCTTTCGCGTGCTTaGCCACAGGCCTCCAGCTGCTCTTCCGCCTGCCGCTTTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSVTCCSCCCLSRA*PQASSCSSACRFPA Trigger: GGCAGGAAAGCGGCAGGCGGAAGAGCAGCTGGAGGCCTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CAA 90 bp | GCCTGGAACTTCTCCTGGTCCAGTGGGATGCACAGGGACTGCACCTaGCGCAGGTTCTCCTCGGTCACCTGCTGCTCCTGCTGTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AWNFSWSSGMHRDCT*RRFSSVTCCSCCCL Trigger: AAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | GACTGCACCTTGCGCAGGTTCTCCTCGGTCACCTGCTaGTCCTGCTGTTGCCTTTCGCGTGCTTTGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: DCTLRRFSSVTC*SCCCLSRALPQ Trigger: CTGTGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | AGGGACTGCACCTTGCGCAGGTTCTCCTCGGTCACCTaGTGCTCCTGCTGTTGCCTTTCGCGTGCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RDCTLRRFSSVT*CSCCCLSRALP Trigger: TGGCAAAGCACGCGAAAGGCAACAGCAGGAGCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS GCA 72 bp | TGGAACTTCTCCTGGTCCAGTGGGATGCACAGGGACTaGACCTTGCGCAGGTTCTCCTCGGTCACCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WNFSWSSGMHRD*TLRRFSSVTCC Trigger: GCAGCAGGTGACCGAGGAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
||
| CDS CCA 72 bp | ACTCAGCACGTCCGCCTGGAACTTCTCCTGGTCCAGTaGGATGCACAGGGACTGCACCTTGCGCAGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TQHVRLELLLVQ*DAQGLHLAQVL Trigger: GAGAACCTGCGCAAGGTGCAGTCCCTGTGCATCCCACTGGACCAGGAGAAGTTCCAGGCGGACGTGCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | GTGATCAGGTCGCCTTGGCACTGGCGGAAGCTGGCGTaGATGCGCTCCATCTCACGTCGCGTAGTCAACAGT | + |
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Preference number: 6 (lower is better) Translates to: VIRSPWHWRKLA*MRSISRRVVNS Trigger: ACTGTTGACTACGCGACGTGAGATGGAGCGCATCAACGCCAGCTTCCGCCAGTGCCAAGGCGACCTGATCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS TCA 72 bp | CTGGGTTGGGCAGCAGGGTTGACTACAGGGAGCCGCTaGGACTCCAGGATCCTTTTCTTGAATTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGWAAGLTTGSR*DSRILFLNSSR Trigger: CCTGGAGGAATTCAAGAAAAGGATCCTGGAGTCTCAGCGGCTCCCTGTAGTCAACCCTGCTGCCCAACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CCA 72 bp | GCTTCGCAGGTCTTGTTGACCTCCTTCAGCTGTTCCTaGCACTGCTTCTCGCTCAGGATGATAGCGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: ASQVLLTSFSCS*HCFSLRMIAAM Trigger: CATCGCCGCTATCATCCTGAGCGAGAAGCAGTGCCAGGAACAGCTGAAGGAGGTCAACAAGACCTGCGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 90 bp | AGCGGCGATGAAGCGATTATAGTTTATGTAGGTGATCAGGTCGCCTaGGCACTGGCGGAAGCTGGCGTTGATGCGCTCCATCTCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: SGDEAIIVYVGDQVA*ALAEAGVDALHLTS Trigger: CGACGTGAGATGGAGCGCATCAACGCCAGCTTCCGCCAGTGCCAAGGCGACCTGATCACCTACATAAACTATAATCGCTTCATCGCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | GAAGCGATTATAGTTTATGTAGGTGATCAGGTCGCCTaGGCACTGGCGGAAGCTGGCGTTGATGCGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: EAIIVYVGDQVA*ALAEAGVDALH Trigger: ATGGAGCGCATCAACGCCAGCTTCCGCCAGTGCCAAGGCGACCTGATCACCTACATAAACTATAATCGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 90 bp | GAAGCTGGCGTTGATGCGCTCCATCTCACGTCGCGTAGTCAACAGTaGCTGCATGACTGTTTCCTTGACAAGCAAGCTGATGTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EAGVDALHLTSRSQQ*LHDCFLDKQADVQL Trigger: CAGCTGAACATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGAGCGCATCAACGCCAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | AGGCTCTCCTTGTCCTTGGAGCACACTGCCTTCTCCTaGGCCACCTCCATCTCCAGTGTCTTAACTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RLSLSLEHTAFS*ATSISSVLTFS Trigger: AGAAAAAGTTAAGACACTGGAGATGGAGGTGGCCAAGGAGAAGGCAGTGTGCTCCAAGGACAAGGAGAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 90 bp | GTCTTAACTTTTTCTCCCAGCTTGAAGAGTAAAGCTTCGCAGGTCTaGTTGACCTCCTTCAGCTGTTCCTGGCACTGCTTCTCGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLTFSPSLKSKASQV*LTSFSCSWHCFSLR Trigger: CCTGAGCGAGAAGCAGTGCCAGGAACAGCTGAAGGAGGTCAACAAGACCTGCGAAGCTTTACTCTTCAAGCTGGGAGAAAAAGTTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS GCA 72 bp | ATGCGCTCCATCTCACGTCGCGTAGTCAACAGTTGCTaGATGACTGTTTCCTTGACAAGCAAGCTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: MRSISRRVVNSC*MTVSLTSKLMF Trigger: GAACATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGAGCGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS GCA 72 bp | TTGATGCGCTCCATCTCACGTCGCGTAGTCAACAGTTaGTGCATGACTGTTTCCTTGACAAGCAAGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: LMRSISRRVVNS*CMTVSLTSKLM Trigger: CATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGAGCGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | CGTCGCGTAGTCAACAGTTGCTGCATGACTGTTTCCTaGACAAGCAAGCTGATGTTCAGCTGTTTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRVVNSCCMTVS*TSKLMFSCLLR Trigger: CCTGAGCAAACAGCTGAACATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | GTTGATGCGCTCCATCTCACGTCGCGTAGTCAACAGTaGCTGCATGACTGTTTCCTTGACAAGCAAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VDALHLTSRSQQ*LHDCFLDKQAD Trigger: ATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGAGCGCATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | TTTTCTCCCAGCTTGAAGAGTAAAGCTTCGCAGGTCTaGTTGACCTCCTTCAGCTGTTCCTGGCACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSPSLKSKASQV*LTSFSCSWHCF Trigger: GAAGCAGTGCCAGGAACAGCTGAAGGAGGTCAACAAGACCTGCGAAGCTTTACTCTTCAAGCTGGGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 90 bp | TCCATCTCACGTCGCGTAGTCAACAGTTGCTGCATGACTGTTTCCTaGACAAGCAAGCTGATGTTCAGCTGTTTGCTCAGGTTAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SISRRVVNSCCMTVS*TSKLMFSCLLRLAC Trigger: ACAGGCTAACCTGAGCAAACAGCTGAACATCAGCTTGCTTGTCAAGGAAACAGTCATGCAGCAACTGTTGACTACGCGACGTGAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | ACTGTTTCCTTGACAAGCAAGCTGATGTTCAGCTGTTaGCTCAGGTTAGCCTGTGAGGCAGATAGTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: TVSLTSKLMFSC*LRLACEADSPT Trigger: GGTTGGACTATCTGCCTCACAGGCTAACCTGAGCAAACAGCTGAACATCAGCTTGCTTGTCAAGGAAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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| CDS CAA 72 bp | ACCTCCATCTCCAGTGTCTTAACTTTTTCTCCCAGCTaGAAGAGTAAAGCTTCGCAGGTCTTGTTGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSISSVLTFSPS*KSKASQVLLTS Trigger: GGAGGTCAACAAGACCTGCGAAGCTTTACTCTTCAAGCTGGGAGAAAAAGTTAAGACACTGGAGATGGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048452.6 |
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