Pregenerated sensors for PLTP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017754Ensembl transcript IDs: ENSMUST00000059954.14, ENSMUST00000109316.8, ENSMUST00000109317.10, ENSMUST00000128110.2, ENSMUST00000156255.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTaGGCTCTTCTCTGTGGCACCGGGACCACTAACACT | + |
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Preference number: 3 (lower is better) Translates to: TNSGIKSGIASN*ALLCGTGTTNT Trigger: AGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAAGCTGCAGCAGAGGGTaGGGGGACATGGGAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGASCSRG*GDMGGR Trigger: GCGGCCTCCCATGTCCCCCCACCCTCTGCTGCAGCT...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCACCAGAGCCGCGGAGGTaGCGCGGATCTTGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAPEPRR*RGSCSP Trigger: CGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGG...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGCCAGAGCCGCGGAGGTaGCGCGGATCTTGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMPEPRR*RGSCSP Trigger: CGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGG...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTTCAGGAAGGGGGATCTaGACCCCACGCCAGGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGSGRGI*TPRQVR Trigger: GCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGA...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTCGAAGCCCGCGTGGTTaGTCACCACCTCACGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGRSPRG*SPPHAR Trigger: TCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCG...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCACGAAGCCCGCGTGGTTaGTCACCACCTCACGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGARSPRG*SPPHAR Trigger: TCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCG...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACCCAGAGCCGCGGAGGTaGCGCGGATCTTGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNPEPRR*RGSCSP Trigger: CGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGG...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGGCAGATCTGCTGGTTaGGGAGGAACCGCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAGRSAG*GGTASQ Trigger: CTGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCC...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAAGCTGCCTCCGGAAGTaGAGCCCCAAGGATGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGASCLRK*SPKDAL Trigger: CAACGCATCCTTGGGGCTGCACTTCCGGAGGCAGCT...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCAGCTGCAGCAGAGGGTaGGGGGACATGGGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASSCSRG*GDMGGR Trigger: GCGGCCTCCCATGTCCCCCCACCCTCTGCTGCAGCT...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTTGTCCAGGAGGGAGTTaGGCAACACCGTCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGCPGGS*ATPSQH Trigger: ATGCTGGGACGGTGTTGCTCAACTCCCTCCTGGACA...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGTCGTCGTCCTCCAGCTaGGGCTCCACCGCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMSSSSS*GSTALL Trigger: CAACAGGGCGGTGGAGCCTCAGCTGGAGGACGACGA...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGGAGATGGTGGTGCCTaGCGGCTTGATGGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAGDGGA*RLDGTT Trigger: CGTTGTACCATCAAGCCGTCAGGCACCACCATCTCC...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGCTCCACCGCCCTGTTaGGGAGGCTCCAGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAAPPPC*GGSSCP Trigger: AGGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGC...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCACCTCCGCCGAGGCATTaGTGTAGCCCCCATCATATA | + |
|
Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAPPPRH*CSPHHI Trigger: TATATGATGGGGGCTACATCAATGCCTCGGCGGAGG...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGCAGATCTGCTGGTTaGGGAGGAACCGCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAGRSAG*GGTASQ Trigger: CTGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCC...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACTCGTCGTCCTCCAGCTaGGGCTCCACCGCCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNSSSSS*GSTALL Trigger: CAACAGGGCGGTGGAGCCTCAGCTGGAGGACGACGA...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCATGGTGCCTGACGGCTTaGTGGTACAACGTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAWCLTA*WYNVEG Trigger: GCCCTCCACGTTGTACCATCAAGCCGTCAGGCACCA...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTTCCGAGGATATCAGGTaGAGCTGTGTGACCCTCACG | + |
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Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGSEDIR*SCVTLT Trigger: CGTGAGGGTCACACAGCTGCACCTGATATCCTCGGA...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGTCAGGAAGGGGGATCTaGACCCCACGCCAGGTACGC | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMSGRGI*TPRQVR Trigger: GCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGA...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCTCAGGAAGGGGGATCTaGACCCCACGCCAGGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASSGRGI*TPRQVR Trigger: GCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGA...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGGCTCCACCGCCCTGTTaGGGAGGCTCCAGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMAPPPC*GGSSCP Trigger: AGGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGC...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGCTCCACCGCCCTGTTaGGGAGGCTCCAGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASAPPPC*GGSSCP Trigger: AGGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGCAGTGGGGCCTGCAGTaGGATCAGCGCCAGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SNWALLCGTGTTNTVDGKQWGLQ*DQRQRL Trigger: GAGTCTCTGGCGCTGATCCCACTGCAGGCCCCACTG...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGCGAAGCCCGCGTGGTTaGTCACCACCTCACGCACGA | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMRSPRG*SPPHAR Trigger: TCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCG...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTAGCCCTTTGGCAAAGTaGAGGTCAGCCCCAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGSPLAK*RSAPTV Trigger: CACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCT...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAAGCCCTTTGGCAAAGTaGAGGTCAGCCCCAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGASPLAK*RSAPTV Trigger: CACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCT...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGCAGATCTGCTGGTTaGGGAGGAACCGCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SNWALLCGTGTTNTVDGKGRSAG*GGTASQ Trigger: CTGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCC...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGTGGTGCCTGACGGCTTaGTGGTACAACGTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SNWALLCGTGTTNTVDGKWCLTA*WYNVEG Trigger: GCCCTCCACGTTGTACCATCAAGCCGTCAGGCACCA...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGTGGTGCCTGACGGCTTaGTGGTACAACGTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMWCLTA*WYNVEG Trigger: GCCCTCCACGTTGTACCATCAAGCCGTCAGGCACCA...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTTGGTCTGGCTGGAAGTaGAGTTCCGAGGATATCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGWSGWK*SSEDIR Trigger: CCTGATATCCTCGGAACTCCACTTCCAGCCAGACCA...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCATGGTCTGGCTGGAAGTaGAGTTCCGAGGATATCAGG | + |
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Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAWSGWK*SSEDIR Trigger: CCTGATATCCTCGGAACTCCACTTCCAGCCAGACCA...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGTAGACCTGTTCGGATaGACACACCCTCCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASVDLFG*THPPPR Trigger: CCTCGGCGGAGGGTGTGTCCATCCGAACAGGTCTAC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCATCAGGTGCAGCTGTGTaGCCCTCACGTCCGAGATAT | + |
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Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLASGAAV*PSRPRY Trigger: ATATCTCGGACGTGAGGGTCACACAGCTGCACCTGA...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGTGTCCAGGAGGGAGTTaGGCAACACCGTCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMCPGGS*ATPSQH Trigger: ATGCTGGGACGGTGTTGCTCAACTCCCTCCTGGACA...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGGGAGATGGTGGTGCCTaGCGGCTTGATGGTACAACG | + |
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Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMGDGGA*RLDGTT Trigger: CGTTGTACCATCAAGCCGTCAGGCACCACCATCTCC...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGGAGATGGTGGTGCCTaGCGGCTTGATGGTACAACG | + |
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Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASGDGGA*RLDGTT Trigger: CGTTGTACCATCAAGCCGTCAGGCACCACCATCTCC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACAGCTGCCTCCGGAAGTaGAGCCCCAAGGATGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNSCLRK*SPKDAL Trigger: CAACGCATCCTTGGGGCTGCACTTCCGGAGGCAGCT...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTTTCAGCAGCAGATCTTaGTCTGGCTGGAAGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGFSSRS*SGWKWS Trigger: ACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAA...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCATATCCAGGTTGCCGTTaGAGACCACAGGATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAYPGCR*RPQDPS Trigger: TGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATA...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGCAGCAGTGTCTTCAGTaGGGCCTGCAGTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNWALLCGTGTTNTVDGKQQCLQ*GLQWDQ Trigger: CTGATCCCACTGCAGGCCCCACTGAAGACACTGCTG...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAACACGTCTGGGATGGTaGTGGTCTCCAGCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLATRLGW*WSPALV Trigger: AACAAGAGCTGGAGACCATCACCATCCCAGACGTGT...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCTCAGGTGCAGCTGTGTaGCCCTCACGTCCGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASSGAAV*PSRPRY Trigger: ATATCTCGGACGTGAGGGTCACACAGCTGCACCTGA...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGACAGGGCAGATCTGCTaGTTGAGGAGGAACCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMTGQIC*LRRNRI Trigger: GATGCGGTTCCTCCTCAACCAGCAGATCTGCCCTGT...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACCAGCAGTGTCTTCAGTaGGGCCTGCAGTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNQQCLQ*GLQWDQ Trigger: CTGATCCCACTGCAGGCCCCACTGAAGACACTGCTG...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGCTTCTCGAAGCCCTTTaGCAAAGTGGAGGTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMLLEAL*QSGGQP Trigger: GGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAG...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGACACGTCTGGGATGGTaGTGGTCTCCAGCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMTRLGW*WSPALV Trigger: AACAAGAGCTGGAGACCATCACCATCCCAGACGTGT...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR GCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGACTCAGGAGAACAATaGTCCCAAAGTAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASDSGEQ*SQSRWP Trigger: GGGCCACCTACTTTGGGAGCATTGTTCTCCTGAGTC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCATTCAGCAGCAGATCTTaGTCTGGCTGGAAGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAFSSRS*SGWKWS Trigger: ACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAA...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACAGGGCAGATCTGCTaGTTGAGGAGGAACCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNTGQIC*LRRNRI Trigger: GATGCGGTTCCTCCTCAACCAGCAGATCTGCCCTGT...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGGAAGTAGCTCTCCATaGCAGAGTCAAAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGGSSSP*QSQRRT Trigger: AGTTCTTCTTTGACTCTGCCATGGAGAGCTACTTCC...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACCTTCTCGAAGCCCTTTaGCAAAGTGGAGGTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNLLEAL*QSGGQP Trigger: GGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAG...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGTAGACCTGTTCGGATaGACACACCCTCCGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGIKSGIASNWALLCGTVDLFG*THPPPR Trigger: CCTCGGCGGAGGGTGTGTCCATCCGAACAGGTCTAC...GGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR CCA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACTATCCAGGTTGCCGTTaGAGACCACAGGATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSGIASNWALLCGTGTTNYPGCR*RPQDPS Trigger: TGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATA...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTAGCTGCAGCAGAGGGTaGGGGGACATGGGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCSCSRG*GDMGGR Trigger: GCGGCCTCCCATGTCCCCCCACCCTCTGCTGCAGCT...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGATGCAGCGCAGACTGATTTaGGTAGATTTGAAACCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AEKTSVRFLNASHPGGVMQRRLI*VDLKPS Trigger: CGAAGGTTTCAAATCTACTCAAATCAGTCTGCGCTG...CATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGCAGCGCAGACTGATTTaGGTAGATTTGAAACCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SNWALLCGTGTTNTVDGKQRRLI*VDLKPS Trigger: CGAAGGTTTCAAATCTACTCAAATCAGTCTGCGCTG...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGGAAGTAGCTCTCCATaGCAGAGTCAAAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KGLAGGAEKTSVRFLNASGSSSP*QSQRRT Trigger: AGTTCTTCTTTGACTCTGCCATGGAGAGCTACTTCC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | AATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCCCTCCGCCGAGGCATTaGTGTAGCCCCCATCATATA | + |
|
Preference number: 4 (lower is better) Translates to: NSGIKSGIASNWALLCGTPPPRH*CSPHHI Trigger: TATATGATGGGGGCTACATCAATGCCTCGGCGGAGG...GGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR GCA 90 bp | AATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCTCCGAGGATATCAGGTaGAGCTGTGTGACCCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: NSGIKSGIASNWALLCGTSEDIR*SCVTLT Trigger: CGTGAGGGTCACACAGCTGCACCTGATATCCTCGGA...GGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | AATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCACAGGGCAGATCTGCTaGTTGAGGAGGAACCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSGIKSGIASNWALLCGTTGQIC*LRRNRI Trigger: GATGCGGTTCCTCCTCAACCAGCAGATCTGCCCTGT...GGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTCAGTGGGGCCTGCAGTaGGATCAGCGCCAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCQWGLQ*DQRQRL Trigger: GAGTCTCTGGCGCTGATCCCACTGCAGGCCCCACTG...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCCTTCTCGAAGCCCTTTaGCAAAGTGGAGGTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSGIKSGIASNWALLCGLLEAL*QSGGQP Trigger: GGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAG...GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCGACTCAGGAGAACAATaGTCCCAAAGTAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSGIKSGIASNWALLCGDSGEQ*SQSRWP Trigger: GGGCCACCTACTTTGGGAGCATTGTTCTCCTGAGTC...GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR TCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTTCAGGTGCAGCTGTGTaGCCCTCACGTCCGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCSGAAV*PSRPRY Trigger: ATATCTCGGACGTGAGGGTCACACAGCTGCACCTGA...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR GCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTTCCGAGGATATCAGGTaGAGCTGTGTGACCCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCSEDIR*SCVTLT Trigger: CGTGAGGGTCACACAGCTGCACCTGATATCCTCGGA...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTAGCCCTTTGGCAAAGTaGAGGTCAGCCCCAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCSPLAK*RSAPTV Trigger: CACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCT...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTTGGTCTGGCTGGAAGTaGAGTTCCGAGGATATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCWSGWK*SSEDIR Trigger: CCTGATATCCTCGGAACTCCACTTCCAGCCAGACCA...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CCA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGAAGTAGCTCTCCATaGCAGAGTCAAAGAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSGIKSGIASNWALLCGSSSP*QSQRRT Trigger: AGTTCTTCTTTGACTCTGCCATGGAGAGCTACTTCC...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 90 bp | GAAAGCGCAGGCCTTCCTGCTTCACCAGATCCAGAGCCGCGGAGGTaGCGCGGATCTTGCAGCCCGGGAGCTCGGCGTGGGCACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESAGLPASPDPEPRR*RGSCSPGARRGHLP Trigger: TGGCAGGTGCCCACGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGGATCTGGTGAAGCAGGAAGGCCTGCGCTTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS-3UTR CAA 90 bp | CTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGAGGTGACGCGGATCTaGCAGCCCGGGAGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LCGTGTTNTVDGKGLAGGEVTRI*QPGSSA Trigger: CGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTC...ACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAGGTGACGCGGATCTaGCAGCCCGGGAGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAEVTRI*QPGSSA Trigger: CGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTC...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGCTCCACCGCCCTGTaGGGGAGGCTCCAGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAGSTAL*GRLQLS Trigger: GGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGCC...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 90 bp | AACTCGGAAAAGGCCACGTACACCATCCTCTCGTCGTCCTCCAGCTaGGGCTCCACCGCCCTGTTGGGGAGGCTCCAGTTGTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSEKATYTILSSSSS*GSTALLGRLQLSSF Trigger: GAAGGAGGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGCCTCAGCTGGAGGACGACGAGAGGATGGTGTACGTGGCCTTTTCCGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGTGTCCAGGAGGGAGTaGAGCAACACCGTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGTGTTNTVDGKGLAGGAVSRRE*SNTVPA Trigger: TGCTGGGACGGTGTTGCTCAACTCCCTCCTGGACAC...TGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGCTCCACCGCCCTGTaGGGGAGGCTCCAGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNWALLCGTGTTNTVDGKGSTAL*GRLQLS Trigger: GGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGCC...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 90 bp | GTCACCACCTCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTaGACCCCACGCCAGGTACGCTCGTTCAGCAAAGGCATCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VTTSRTKLIPSGRGI*TPRQVRSFSKGITP Trigger: CGGAGTGATGCCTTTGCTGAACGAGCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGTGGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 90 bp | GATCATCCACAGAACTGCGCACGGGCACTGTGTCCAGGAGGGAGTTaGGCAACACCGTCCCAGCATGGTAGAGCACAGGGCAGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DHPQNCARALCPGGS*ATPSQHGRAQGRSA Trigger: AGCAGATCTGCCCTGTGCTCTACCATGCTGGGACGGTGTTGCTCAACTCCCTCCTGGACACAGTGCCCGTGCGCAGTTCTGTGGATGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 90 bp | CGCCCTGTTGGGGAGGCTCCAGTTGTCCTCCTTCAGAGGGAAGAATaGTCCCCGGAATTCCATATCCAGGTTGCCGTTGGAGACCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPVGEAPVVLLQREE*SPEFHIQVAVGDHR Trigger: CCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTCTGAAGGAGGACAACTGGAGCCTCCCCAACAGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGCAGATCTGCTGGTaGAGGAGGAACCGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLCGTGTTNTVDGKGLAGQICW*RRNRIP Trigger: TGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCCC...TGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 90 bp | GCCTCGCAGGAGACATTGGACACTTTAATCCGACCACTGGAATCCTaGGAGAGCTGTAGACCTGTTCGGATGGACACACCCTCCGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASQETLDTLIRPLES*ESCRPVRMDTPSAE Trigger: CTCGGCGGAGGGTGTGTCCATCCGAACAGGTCTACAGCTCTCCCAGGATTCCAGTGGTCGGATTAAAGTGTCCAATGTCTCCTGCGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000156255.8 |
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| CDS CCA 90 bp | GCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAAGTaGAGGTCAGCCCCAACAGTGACGAAGCCCGCGTGGTTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGRFLSITSRSPLAK*RSAPTVTKPAWLVT Trigger: GGTGACCAACCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGGGCAGATCTGCTGGTaGAGGAGGAACCGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGLAGGAEKTSVRFLNASGQICW*RRNRIP Trigger: TGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCCC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 90 bp | GGTTGCCGTTGGAGACCACAGGATCCTTCAGAAGGGAGTAATCGATaGCCACGAGATCATCCACAGAACTGCGCACGGGCACTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCRWRPQDPSEGSNR*PRDHPQNCARALCP Trigger: TGGACACAGTGCCCGTGCGCAGTTCTGTGGATGATCTCGTGGGCATCGATTACTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACGGGCAGATCTGCTGGTaGAGGAGGAACCGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSGIASNWALLCGTGTTNGQICW*RRNRIP Trigger: TGGGATGCGGTTCCTCCTCAACCAGCAGATCTGCCC...GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS CCA 90 bp | CAGCCCCAAGGATGCGTTGGAGATGTTCAGCAGCAGATCTTGGTCTaGCTGGAAGTGGAGTTCCGAGGATATCAGGTGCAGCTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPQGCVGDVQQQILV*LEVEFRGYQVQLCD Trigger: GTCACACAGCTGCACCTGATATCCTCGGAACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 90 bp | ACCAGTAGAGTAGCTGCCTCCGGAAGTGCAGCCCCAAGGATGCGTTaGAGATGTTCAGCAGCAGATCTTGGTCTGGCTGGAAGTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSRVAASGSAAPRMR*RCSAADLGLAGSGV Trigger: AACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCTGCACTTCCGGAGGCAGCTACTCTACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCAGCCCCAAGGATGCGTaGGAGATGTTCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGLAGGAEKTSVRFLNASSPKDA*EMFSSR Trigger: TCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCT...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAGAGCCCCAAGGATGCGTaGGAGATGTTCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SNWALLCGTGTTNTVDGKSPKDA*EMFSSR Trigger: TCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCT...CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 90 bp | AGAGCTGTAGACCTGTTCGGATGGACACACCCTCCGCCGAGGCATTaGTGTAGCCCCCATCATATAAGAACCAGTAGAGTAGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAVDLFGWTHPPPRH*CSPHHIRTSRVAAS Trigger: GGAGGCAGCTACTCTACTGGTTCTTATATGATGGGGGCTACATCAATGCCTCGGCGGAGGGTGTGTCCATCCGAACAGGTCTACAGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 90 bp | GTCCGAGATATTGTAGTAAAAGTGGCCCTTTGCGCCGTACACGTCTaGGATGGTGATGGTCTCCAGCTCTTGTTCCAGAAAGCGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRDIVVKVALCAVHV*DGDGLQLLFQKAQA Trigger: GGCCTGCGCTTTCTGGAACAAGAGCTGGAGACCATCACCATCCCAGACGTGTACGGCGCAAAGGGCCACTTTTACTACAATATCTCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 90 bp | CAACAAGTGTCAGCTGCAGCGCTCCAGCCTGGAAGTAGCTCTCCATaGCAGAGTCAAAGAAGAACTCGGAAAAGGCCACGTACACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QQVSAAALQPGSSSP*QSQRRTRKRPRTPS Trigger: GGATGGTGTACGTGGCCTTTTCCGAGTTCTTCTTTGACTCTGCCATGGAGAGCTACTTCCAGGCTGGAGCGCTGCAGCTGACACTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS-3UTR CAA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCGCCTCGCAGGAGACATaGGACACTTTAATCCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KGLAGGAEKTSVRFLNASASQET*DTLIRP Trigger: TGGTCGGATTAAAGTGTCCAATGTCTCCTGCGAGGC...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR CAA 90 bp | AAGGGGTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCATATCCAGGTTGCCGTaGGAGACCACAGGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGLAGGAEKTSVRFLNASISRLP*ETTGSF Trigger: GAAGGATCCTGTGGTCTCCAACGGCAACCTGGATAT...GCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 90 bp | TATTGTAGTAAAAGTGGCCCTTTGCGCCGTACACGTCTGGGATGGTaGTGGTCTCCAGCTCTTGTTCCAGAAAGCGCAGGCCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YCSKSGPLRRTRLGW*WSPALVPESAGLPA Trigger: AGCAGGAAGGCCTGCGCTTTCTGGAACAAGAGCTGGAGACCATCACCATCCCAGACGTGTACGGCGCAAAGGGCCACTTTTACTACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS GCA 90 bp | CTGTGTGACCCTCACGTCCGAGATATTGTAGTAAAAGTGGCCCTTTaGGCCGTACACGTCTGGGATGGTGATGGTCTCCAGCTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCDPHVRDIVVKVAL*AVHVWDGDGLQLLF Trigger: GAACAAGAGCTGGAGACCATCACCATCCCAGACGTGTACGGCGCAAAGGGCCACTTTTACTACAATATCTCGGACGTGAGGGTCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS GCA 90 bp | CCTCCTTCAGAGGGAAGAATGCTCCCCGGAATTCCATATCCAGGTTaGCGTTGGAGACCACAGGATCCTTCAGAAGGGAGTAATCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSEGRMLPGIPYPG*RWRPQDPSEGSNRC Trigger: GCATCGATTACTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTCTGAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 90 bp | TCAGAGGGAAGAATGCTCCCCGGAATTCCATATCCAGGTTGCCGTTaGAGACCACAGGATCCTTCAGAAGGGAGTAATCGATGCCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: SEGRMLPGIPYPGCR*RPQDPSEGSNRCPR Trigger: TCGTGGGCATCGATTACTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCTCCACCGCCCTGTaGGGGAGGCTCCAGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTNSGIKSGIASNWALLCGSTAL*GRLQLS Trigger: GGACAACTGGAGCCTCCCCAACAGGGCGGTGGAGCC...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCGTGTCCAGGAGGGAGTaGAGCAACACCGTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNSGIKSGIASNWALLCGVSRRE*SNTVPA Trigger: TGCTGGGACGGTGTTGCTCAACTCCCTCCTGGACAC...GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | AATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCATATCCAGGTTGCCGTaGGAGACCACAGGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSGIKSGIASNWALLCGTISRLP*ETTGSF Trigger: GAAGGATCCTGTGGTCTCCAACGGCAACCTGGATAT...GGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS-3UTR CAA 90 bp | ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCGCCTCGCAGGAGACATaGGACACTTTAATCCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TNSGIKSGIASNWALLCGASQET*DTLIRP Trigger: TGGTCGGATTAAAGTGTCCAATGTCTCCTGCGAGGC...GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 |
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| CDS-3UTR CAA 90 bp | TTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTAGCCCCAAGGATGCGTaGGAGATGTTCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTNSGIKSGIASNWALLCSPKDA*EMFSSR Trigger: TCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCT...ACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 72 bp | GAGGTGACGCGGATCTTGCAGCCCGGGAGCTCGGCGTaGGCACCTGCCAGGAGCGCTAGGAAGAGGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVTRILQPGSSA*APARSARKRAQ Trigger: CTGGGCCCTCTTCCTAGCGCTCCTGGCAGGTGCCCACGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS CAA 90 bp | CCTTCCTGCTTCACCAGATCCAGAGCCGCGGAGGTGACGCGGATCTaGCAGCCCGGGAGCTCGGCGTGGGCACCTGCCAGGAGCGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCFTRSRAAEVTRI*QPGSSAWAPARSAR Trigger: CCTAGCGCTCCTGGCAGGTGCCCACGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGGATCTGGTGAAGCAGGAAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS TCA 72 bp | GGCCTTCCTGCTTCACCAGATCCAGAGCCGCGGAGGTaGCGCGGATCTTGCAGCCCGGGAGCTCGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPASPDPEPRR*RGSCSPGARRG Trigger: CCCACGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGGATCTGGTGAAGCAGGAAGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS CAA 72 bp | TTCACCAGATCCAGAGCCGCGGAGGTGACGCGGATCTaGCAGCCCGGGAGCTCGGCGTGGGCACCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTRSRAAEVTRI*QPGSSAWAPAR Trigger: CCTGGCAGGTGCCCACGCCGAGCTCCCGGGCTGCAAGATCCGCGTCACCTCCGCGGCTCTGGATCTGGTGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS TCA 72 bp | AAGGCCACGTACACCATCCTCTCGTCGTCCTCCAGCTaGGGCTCCACCGCCCTGTTGGGGAGGCTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KATYTILSSSSS*GSTALLGRLQL Trigger: CAACTGGAGCCTCCCCAACAGGGCGGTGGAGCCTCAGCTGGAGGACGACGAGAGGATGGTGTACGTGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 72 bp | AGCCCGCGTGGTTGGTCACCACCTCACGCACGAAGTTaGTACCCTCAGGAAGGGGGATCTGCACCCCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPRGWSPPHARS*YPQEGGSAPHA Trigger: GGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 90 bp | ACAGTGACGAAGCCCGCGTGGTTGGTCACCACCTCACGCACGAAGTaGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGTACGC | + |
|
Preference number: 6 (lower is better) Translates to: TVTKPAWLVTTSRTK*IPSGRGICTPRQVR Trigger: GCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCGTCACTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 72 bp | GTCTCCAGCTCTTGTTCCAGAAAGCGCAGGCCTTCCTaGTTCACCAGATCCAGAGCCGCGGAGGTGACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSSCSRKRRPS*FTRSRAAEVTR Trigger: CCGCGTCACCTCCGCGGCTCTGGATCTGGTGAAGCAGGAAGGCCTGCGCTTTCTGGAACAAGAGCTGGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 |
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| CDS CAA 72 bp | GTGGCCCTCAGAAGCATGTCCAGGTCACTCGGCACCTaGTCCCCAACAAGTGTCAGCTGCAGCGCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VALRSMSRSLGT*SPTSVSCSAPA Trigger: GGCTGGAGCGCTGCAGCTGACACTTGTTGGGGACAAGGTGCCGAGTGACCTGGACATGCTTCTGAGGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 72 bp | AAGCCCGCGTGGTTGGTCACCACCTCACGCACGAAGTaGATACCCTCAGGAAGGGGGATCTGCACCCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: KPAWLVTTSRTK*IPSGRGICTPR Trigger: GCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 72 bp | GAAGCCCTTTGGCAAAGTGGAGGTCAGCCCCAACAGTaGCGAAGCCCGCGTGGTTGGTCACCACCTCACGCA | + |
|
Preference number: 6 (lower is better) Translates to: EALWQSGGQPQQ*RSPRGWSPPHA Trigger: TGCGTGAGGTGGTGACCAACCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 72 bp | ATCACTCCGATTTGCAGCAGTGTCTTCAGTGGGGCCTaGAGTGGGATCAGCGCCAGAGACTCCAGCGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ITPICSSVFSGA*SGISARDSSAD Trigger: GTCTGCGCTGGAGTCTCTGGCGCTGATCCCACTGCAGGCCCCACTGAAGACACTGCTGCAAATCGGAGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 72 bp | TCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTaGACCCCACGCCAGGTACGCTCGTTCAGCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRTKLIPSGRGI*TPRQVRSFSKG Trigger: GCCTTTGCTGAACGAGCGTACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 72 bp | AAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCGCGTaGTTGGTCACCACCTCACGCACGAAGTTGATACCC | + |
|
Preference number: 6 (lower is better) Translates to: KWRSAPTVTKPA*LVTTSRTKLIP Trigger: GGGTATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 72 bp | TGGAGGTCAGCCCCAACAGTGACGAAGCCCGCGTGGTaGGTCACCACCTCACGCACGAAGTTGATACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WRSAPTVTKPAW*VTTSRTKLIPS Trigger: TGAGGGTATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 90 bp | GCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTaGGCAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ATSAGRFLSITSRSP*AKWRSAPTVTKPAW Trigger: CCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS CCA 72 bp | GTAGCTGCCTCCGGAAGTGCAGCCCCAAGGATGCGTTaGAGATGTTCAGCAGCAGATCTTGGTCTGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VAASGSAAPRMR*RCSAADLGLAG Trigger: TCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCTGCACTTCCGGAGGCAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | TCCGATTTGCAGCAGTGTCTTCAGTGGGGCCTGCAGTaGGATCAGCGCCAGAGACTCCAGCGCAGACTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SDLQQCLQWGLQ*DQRQRLQRRLI Trigger: AATCAGTCTGCGCTGGAGTCTCTGGCGCTGATCCCACTGCAGGCCCCACTGAAGACACTGCTGCAAATCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS TCA 72 bp | AAAAGTGGCCCTTTGCGCCGTACACGTCTGGGATGGTaGTGGTCTCCAGCTCTTGTTCCAGAAAGCGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KSGPLRRTRLGW*WSPALVPESAG Trigger: GCCTGCGCTTTCTGGAACAAGAGCTGGAGACCATCACCATCCCAGACGTGTACGGCGCAAAGGGCCACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
||
| CDS GCA 72 bp | GGGGAGGCTCCAGTTGTCCTCCTTCAGAGGGAAGAATaGTCCCCGGAATTCCATATCCAGGTTGCCGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GEAPVVLLQREE*SPEFHIQVAVG Trigger: TCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTCTGAAGGAGGACAACTGGAGCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
||
| CDS GCA 72 bp | CAGGTACGCTCGTTCAGCAAAGGCATCACTCCGATTTaGAGCAGTGTCTTCAGTGGGGCCTGCAGTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QVRSFSKGITPI*SSVFSGACSGI Trigger: GATCCCACTGCAGGCCCCACTGAAGACACTGCTGCAAATCGGAGTGATGCCTTTGCTGAACGAGCGTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 72 bp | GGGACATGGGAGGCCGCAACGTCTGCAGGACGGTTCTaGTCAATCACTTCTCGAAGCCCTTTGGCAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GTWEAATSAGRF*SITSRSPLAKW Trigger: CCACTTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGGCCTCCCATGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 90 bp | GAAGTGCAGCCCCAAGGATGCGTTGGAGATGTTCAGCAGCAGATCTaGGTCTGGCTGGAAGTGGAGTTCCGAGGATATCAGGTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EVQPQGCVGDVQQQI*VWLEVEFRGYQVQL Trigger: CAGCTGCACCTGATATCCTCGGAACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGGGCTGCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | TCAGCTGCAGCGCTCCAGCCTGGAAGTAGCTCTCCATaGCAGAGTCAAAGAAGAACTCGGAAAAGGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: SAAALQPGSSSP*QSQRRTRKRPR Trigger: ACGTGGCCTTTTCCGAGTTCTTCTTTGACTCTGCCATGGAGAGCTACTTCCAGGCTGGAGCGCTGCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 72 bp | TTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAAGTaGAGGTCAGCCCCAACAGTGACGAAGCCCGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: FLSITSRSPLAK*RSAPTVTKPAW Trigger: CCACGCGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS GCA 72 bp | GAGGGAAGAATGCTCCCCGGAATTCCATATCCAGGTTaGCGTTGGAGACCACAGGATCCTTCAGAAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: EGRMLPGIPYPG*RWRPQDPSEGS Trigger: ACTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CCA 72 bp | GAGATGTTCAGCAGCAGATCTTGGTCTGGCTGGAAGTaGAGTTCCGAGGATATCAGGTGCAGCTGTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: EMFSSRSWSGWK*SSEDIRCSCVT Trigger: GGTCACACAGCTGCACCTGATATCCTCGGAACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | CCCAAGGATGCGTTGGAGATGTTCAGCAGCAGATCTTaGTCTGGCTGGAAGTGGAGTTCCGAGGATATCAGG | + |
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Preference number: 6 (lower is better) Translates to: PKDALEMFSSRS*SGWKWSSEDIR Trigger: CCTGATATCCTCGGAACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CAA 72 bp | CCCCAAGGATGCGTTGGAGATGTTCAGCAGCAGATCTaGGTCTGGCTGGAAGTGGAGTTCCGAGGATATCAG | + |
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Preference number: 6 (lower is better) Translates to: PQGCVGDVQQQI*VWLEVEFRGYQ Trigger: CTGATATCCTCGGAACTCCACTTCCAGCCAGACCAAGATCTGCTGCTGAACATCTCCAACGCATCCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CAA 72 bp | AGAGGGAAGAATGCTCCCCGGAATTCCATATCCAGGTaGCCGTTGGAGACCACAGGATCCTTCAGAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGKNAPRNSISR*PLETTGSFRRE Trigger: CTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCTTCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS TCA 72 bp | GACCTGTTCGGATGGACACACCCTCCGCCGAGGCATTaGTGTAGCCCCCATCATATAAGAACCAGTAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: DLFGWTHPPPRH*CSPHHIRTSRV Trigger: TACTCTACTGGTTCTTATATGATGGGGGCTACATCAATGCCTCGGCGGAGGGTGTGTCCATCCGAACAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | GAGACATTGGACACTTTAATCCGACCACTGGAATCCTaGGAGAGCTGTAGACCTGTTCGGATGGACACACCC | + |
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Preference number: 6 (lower is better) Translates to: ETLDTLIRPLES*ESCRPVRMDTP Trigger: GGGTGTGTCCATCCGAACAGGTCTACAGCTCTCCCAGGATTCCAGTGGTCGGATTAAAGTGTCCAATGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | AGAATGCTCCCCGGAATTCCATATCCAGGTTGCCGTTaGAGACCACAGGATCCTTCAGAAGGGAGTAATCGA | + |
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Preference number: 6 (lower is better) Translates to: RMLPGIPYPGCR*RPQDPSEGSNR Trigger: TCGATTACTCCCTTCTGAAGGATCCTGTGGTCTCCAACGGCAACCTGGATATGGAATTCCGGGGAGCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 |
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| CDS CAA 90 bp | CCGAAGGCCATATTCATTTTAGACACAGAGGCCTCGCAGGAGACATaGGACACTTTAATCCGACCACTGGAATCCTGGGAGAGCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PKAIFILDTEASQET*DTLIRPLESWESCR Trigger: TCTACAGCTCTCCCAGGATTCCAGTGGTCGGATTAAAGTGTCCAATGTCTCCTGCGAGGCCTCTGTGTCTAAAATGAATATGGCCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000156255.8 |
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| CDS CCA 72 bp | ATTGTAGTAAAAGTGGCCCTTTGCGCCGTACACGTCTaGGATGGTGATGGTCTCCAGCTCTTGTTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: IVVKVALCAVHV*DGDGLQLLFQK Trigger: TTTCTGGAACAAGAGCTGGAGACCATCACCATCCCAGACGTGTACGGCGCAAAGGGCCACTTTTACTACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000109317.10 ENSMUST00000128110.2 ENSMUST00000156255.8 |
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| CDS CAA 72 bp | ATATTCATTTTAGACACAGAGGCCTCGCAGGAGACATaGGACACTTTAATCCGACCACTGGAATCCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: IFILDTEASQET*DTLIRPLESWE Trigger: CTCCCAGGATTCCAGTGGTCGGATTAAAGTGTCCAATGTCTCCTGCGAGGCCTCTGTGTCTAAAATGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059954.14 ENSMUST00000109316.8 ENSMUST00000156255.8 |
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