Pregenerated sensors for PLSCR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095654Ensembl transcript IDs: ENSMUST00000179751.3
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCCTGTTTCCTGGGATTGGAAGAAGCCTCCTGAGAGTTTTGATCTaGGTTTGTAGCTCGAGGAAGAAACCCAGGCAGACTTCTAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CLFPGIGRSLLRVLI*VCSSRKKPRQTSRV Trigger: AACCCTAGAAGTCTGCCTGGGTTTCTTCCTCGAGCTACAAACCCAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGGAAACAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS TCA 90 bp | TTGGAGGTCTCAGTGCCGAGGATCATCCCAAGAAGTTCCACCTGCTaGTGGATGATTATCAGGTCCAGCTGGCTTAAATACTCTAGACCA | + |
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Preference number: 5 (lower is better) Translates to: LEVSVPRIIPRSSTC*WMIIRSSWLKYSRP Trigger: TGGTCTAGAGTATTTAAGCCAGCTGGACCTGATAATCATCCATCAGCAGGTGGAACTTCTTGGGATGATCCTCGGCACTGAGACCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CCA 90 bp | CCAATCATCGCTGCTTTGAGTGTCACGTCGAGATCTGCTGGAACATaGATCCCAAAGTTGTCAGCGTTTGTGAACACGTCATTGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: PIIAALSVTSRSAGT*IPKLSAFVNTSLTN Trigger: ATTTGTCAATGACGTGTTCACAAACGCTGACAACTTTGGGATCCATGTTCCAGCAGATCTCGACGTGACACTCAAAGCAGCGATGATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS TCA 72 bp | GGAGGGAGAGTGGCTGTTGGCAGGAAACTGCTTGGCTaGGAGACACCCGGCTGCTGCCTTGCCTGTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GGRVAVGRKLLG*ETPGCCLACFL Trigger: CAGGAAACAGGCAAGGCAGCAGCCGGGTGTCTCTCAGCCAAGCAGTTTCCTGCCAACAGCCACTCTCCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 72 bp | AGGGGCCTGTTCACTGTAATCACCTCTCGACCCGAGTaGTCTGTGATCCTCAGGGTGCAGGCTCGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RGLFTVITSRPE*SVILRVQARSV Trigger: CACGCTGCGAGCCTGCACCCTGAGGATCACAGACAACTCGGGTCGAGAGGTGATTACAGTGAACAGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 90 bp | TTACACCTTAGGGGCCTGTTCACTGTAATCACCTCTCGACCCGAGTaGTCTGTGATCCTCAGGGTGCAGGCTCGCAGCGTGGAACACACA | + |
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Preference number: 6 (lower is better) Translates to: LHLRGLFTVITSRPE*SVILRVQARSVEHT Trigger: TGTGTGTTCCACGCTGCGAGCCTGCACCCTGAGGATCACAGACAACTCGGGTCGAGAGGTGATTACAGTGAACAGGCCCCTAAGGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CCA 72 bp | GCTGAGAGACACCCGGCTGCTGCCTTGCCTGTTTCCTaGGATTGGAAGAAGCCTCCTGAGAGTTTTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: AERHPAAALPVS*DWKKPPESFDL Trigger: CAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGGAAACAGGCAAGGCAGCAGCCGGGTGTCTCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CCA 72 bp | AGACACCCGGCTGCTGCCTTGCCTGTTTCCTGGGATTaGAAGAAGCCTCCTGAGAGTTTTGATCTGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: RHPAAALPVSWD*KKPPESFDLGL Trigger: CAAACCCAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGGAAACAGGCAAGGCAGCAGCCGGGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 90 bp | CTGCCTTGCCTGTTTCCTGGGATTGGAAGAAGCCTCCTGAGAGTTTaGATCTGGGTTTGTAGCTCGAGGAAGAAACCCAGGCAGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPCLFPGIGRSLLRV*IWVCSSRKKPRQTS Trigger: AGAAGTCTGCCTGGGTTTCTTCCTCGAGCTACAAACCCAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGGAAACAGGCAAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CCA 72 bp | CCTGGGATTGGAAGAAGCCTCCTGAGAGTTTTGATCTaGGTTTGTAGCTCGAGGAAGAAACCCAGGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: PGIGRSLLRVLI*VCSSRKKPRQT Trigger: AGTCTGCCTGGGTTTCTTCCTCGAGCTACAAACCCAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 72 bp | CTGTTTCCTGGGATTGGAAGAAGCCTCCTGAGAGTTTaGATCTGGGTTTGTAGCTCGAGGAAGAAACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LFPGIGRSLLRV*IWVCSSRKKPR Trigger: CCTGGGTTTCTTCCTCGAGCTACAAACCCAGATCAAAACTCTCAGGAGGCTTCTTCCAATCCCAGGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CCA 72 bp | AATCATCGCTGCTTTGAGTGTCACGTCGAGATCTGCTaGAACATGGATCCCAAAGTTGTCAGCGTTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: NHRCFECHVEIC*NMDPKVVSVCE Trigger: TTCACAAACGCTGACAACTTTGGGATCCATGTTCCAGCAGATCTCGACGTGACACTCAAAGCAGCGATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 72 bp | AAATCAAAGAGAAAGCAAGCACCAATCATCGCTGCTTaGAGTGTCACGTCGAGATCTGCTGGAACATGGATC | + |
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Preference number: 6 (lower is better) Translates to: KSKRKQAPIIAA*SVTSRSAGTWI Trigger: GATCCATGTTCCAGCAGATCTCGACGTGACACTCAAAGCAGCGATGATTGGTGCTTGCTTTCTCTTTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 90 bp | TTGTCAGCGTTTGTGAACACGTCATTGACAAATCCCGACCAGTACTaGGAGATCTTCCCAATTGTAACCTTCTCATCAACAGTTTTCACC | + |
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Preference number: 6 (lower is better) Translates to: LSAFVNTSLTNPDQY*EIFPIVTFSSTVFT Trigger: GGTGAAAACTGTTGATGAGAAGGTTACAATTGGGAAGATCTCCAAGTACTGGTCGGGATTTGTCAATGACGTGTTCACAAACGCTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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| CDS CAA 72 bp | TTTGTGAACACGTCATTGACAAATCCCGACCAGTACTaGGAGATCTTCCCAATTGTAACCTTCTCATCAACA | + |
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Preference number: 6 (lower is better) Translates to: FVNTSLTNPDQY*EIFPIVTFSST Trigger: TGTTGATGAGAAGGTTACAATTGGGAAGATCTCCAAGTACTGGTCGGGATTTGTCAATGACGTGTTCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179751.3 |
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