Pregenerated sensors for PLSCR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032377Ensembl transcript IDs: ENSMUST00000034941.9
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTGGCTCCTAAAGATGAAGACTAAGAGTAGCAGTCCTCTCACCTaGAATCAAGTTTTTCCTAATGAAGAAGAAAGGGACAGGTACAGA | + |
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Preference number: 1 (lower is better) Translates to: FWLLKMKTKSSSPLT*NQVFPNEEERDRYR Trigger: TCTGTACCTGTCCCTTTCTTCTTCATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCTACTCTTAGTCTTCATCTTTAGGAGCCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR TCA 90 bp | ATCTGGAGAAAATATGGAAGCAACAAATTTACTGTGTCTTCTTACTaGTTGCATATAATGAGTTGTTTACCACGCAAAGCGTCACCAGTA | + |
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Preference number: 1 (lower is better) Translates to: IWRKYGSNKFTVSSY*LHIMSCLPRKASPV Trigger: TACTGGTGACGCTTTGCGTGGTAAACAACTCATTATATGCAATCAGTAAGAAGACACAGTAAATTTGTTGCTTCCATATTTTCTCCAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR CCA 90 bp | GTGATGCAAAGTGCTAGAATGGGGTGTGGGTGGGCAAAGGACAGGCTTATACGTAGCAGTCCTCTCACCTaGAATCAAGTTTTTCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: VMQSARMGCGWAKDRLIRSSPLT*NQVFPN Trigger: ATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCT...ACGTATAAGCCTGTCCTTTGCCCACCCACACCCCATTCTAGCACTTTGCATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGCTGATCAACTTTCCCTaGTACCCTCATCCTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: FKKACWLHLFSQDNSTQELINFP*YPHPTF Trigger: GAAGGTAGGATGAGGGTACCAGGGAAAGTTGATCAG...CTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGCGTCACAAGGACATCCTaGTCATTAGATGGATTTCGA | + |
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Preference number: 2 (lower is better) Translates to: SKRPVGYISSLRIIQPKSVTRTS*SLDGFR Trigger: TCGAAATCCATCTAATGACCAGGATGTCCTTGTGAC...GCTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR CCA 90 bp | AGCATTCTGACTTTCACTATCAACGTGATGCAAAGTGCTAGAATGGGGTGTGGGTTTCTGTGCACTTTTTaGCTCCTAAAGATGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: SILTFTINVMQSARMGCGFLCTF*LLKMKT Trigger: AGTCTTCATCTTTAGGAGCCAAAAAGTGCACAGAAA...CCCACACCCCATTCTAGCACTTTGCATCACGTTGATAGTGAAAGTCAGAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGGCCCAGTTGAGGGTATaGAGAAATATGCATAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: FKKACWLHLFSQDNSTQEAQLRV*RNMHRK Trigger: TTTTCTATGCATATTTCTTCATACCCTCAACTGGGC...CTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGAGCACAGAAATATGAAGCATTCTGACTTTCACTATCAACGTGATGCATCCACATTGCCCAGTTaGGGGTATGAAGAAATATGC | + |
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Preference number: 2 (lower is better) Translates to: SMEHRNMKHSDFHYQRDASTLPS*GYEEIC Trigger: GCATATTTCTTCATACCCTCAACTGGGCAATGTGGA...TGCATCACGTTGATAGTGAAAGTCAGAATGCTTCATATTTCTGTGCTCCATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTACCACGCAAAGCGTCACCAGTATTAAAGCAATGACAGGATTTACATATATGCATGTTGCAGAATaGTGTTCTGGTGCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: LFTTQSVTSIKAMTGFTYMHVAE*CSGAHR Trigger: TCTGTGTGCACCAGAACATCATTCTGCAACATGCAT...ATATGTAAATCCTGTCATTGCTTTAATACTGGTGACGCTTTGCGTGGTAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR GCA 90 bp | ATACATACACTGTCCTTAGTACAAGTCTGCTGGTCTTCCATAGTCCTCATTGATAGCACATTATTTCTGTaGACTTTTTGGCTCCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IHTLSLVQVCWSSIVLIDSTLFL*TFWLLK Trigger: CTTTAGGAGCCAAAAAGTGCACAGAAATAATGTGCT...ATCAATGAGGACTATGGAAGACCAGCAGACTTGTACTAAGGACAGTGTATGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR GCA 90 bp | AGTATGGAGCACAGAAATATGAAGCATTCTGACTTTCACTATCAACGTGATGCAAACTTGTATGCATGTTaGAGAATGATGTTCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SMEHRNMKHSDFHYQRDANLYAC*RMMFWC Trigger: GCACCAGAACATCATTCTGCAACATGCATACAAGTT...TGCATCACGTTGATAGTGAAAGTCAGAATGCTTCATATTTCTGTGCTCCATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR GCA 90 bp | ACGCAAAGCGTCACCAGTATTAAAGCAATGACAGGATTTACATATTCAGCTTTAACAACATGTGTAAGATaGCAAGAACTTATTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TQSVTSIKAMTGFTYSALTTCVR*QELIWL Trigger: CAGCCAAATAAGTTCTTGGCATCTTACACATGTTGT...TAAAGCTGAATATGTAAATCCTGTCATTGCTTTAATACTGGTGACGCTTTGCGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR CCA 72 bp | ATCAACGTGATGCAAAGTGCTAGAATGGGGTGTGGGTaGGCAAAGGACAGGCTTATACGTGAGCTCTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: INVMQSARMGCG*AKDRLIRELSE Trigger: TTCTGAGAGCTCACGTATAAGCCTGTCCTTTGCCCACCCACACCCCATTCTAGCACTTTGCATCACGTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR TCA 72 bp | GGACAGGTACAGAAGATGTGTTGTGACCTGTCAAGTTaGGAACCAAGGGTTTCACTTTCCCATAGCTCACAT | + |
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Preference number: 3 (lower is better) Translates to: GQVQKMCCDLSS*EPRVSLSHSSH Trigger: ATGTGAGCTATGGGAAAGTGAAACCCTTGGTTCTCAACTTGACAGGTCACAACACATCTTCTGTACCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR TCA 72 bp | ATGAAGAAGAAAGGGACAGGTACAGAAGATGTGTTGTaGCCTGTCAAGTTGAGAACCAAGGGTTTCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: MKKKGTGTEDVL*PVKLRTKGFTF Trigger: GAAAGTGAAACCCTTGGTTCTCAACTTGACAGGTCACAACACATCTTCTGTACCTGTCCCTTTCTTCTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGGAGAACTTTAGGAACTaGTATGCATGTTGCAGAATG | + |
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Preference number: 3 (lower is better) Translates to: MCKMPRTYLAVALINFPWENFRN*YACCRM Trigger: CATTCTGCAACATGCATACAAGTTCCTAAAGTTCTC...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR CCA 72 bp | CTAAAGATGAAGACTAAGAGTAGCAGTCCTCTCACCTaGAATCAAGTTTTTCCTAATGAAGAAGAAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LKMKTKSSSPLT*NQVFPNEEERD Trigger: GTCCCTTTCTTCTTCATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCTACTCTTAGTCTTCATCTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR CCA 72 bp | TTTAGGAACTTGTATGCATGTTGCAGAATGATGTTCTaGTGCACACAGACACACACACACACACAAAACATT | + |
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Preference number: 3 (lower is better) Translates to: FRNLYACCRMMF*CTQTHTHTQNI Trigger: AATGTTTTGTGTGTGTGTGTGTGTCTGTGTGCACCAGAACATCATTCTGCAACATGCATACAAGTTCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR TCA 72 bp | CTACCTTCATATACAGGTAGCTCCACATTGCCCAGTTaGGGGTATGAAGAAATATGCATAGAAAATATAAAC | + |
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Preference number: 3 (lower is better) Translates to: LPSYTGSSTLPS*GYEEICIENIN Trigger: GTTTATATTTTCTATGCATATTTCTTCATACCCTCAACTGGGCAATGTGGAGCTACCTGTATATGAAGGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR TCA 72 bp | AAATATGGAAGCAACAAATTTACTGTGTCTTCTTACTaGTTGCATATAATGAGTTGTTTACCACGCAAAGCG | + |
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Preference number: 3 (lower is better) Translates to: KYGSNKFTVSSY*LHIMSCLPRKA Trigger: CGCTTTGCGTGGTAAACAACTCATTATATGCAATCAGTAAGAAGACACAGTAAATTTGTTGCTTCCATATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | GTGATGCAAAGTGCTAGAATGGGGTGTGGGTGGGCAAAGGACAGGCTTATACGTTGGTACTGGATTGGATaGGTGCCACCAGTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VMQSARMGCGWAKDRLIRWYWIG*VPPVGW Trigger: CCATCCCACTGGTGGCACCCATCCAATCCAGTACCA...ACGTATAAGCCTGTCCTTTGCCCACCCACACCCCATTCTAGCACTTTGCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGGATGGTACAAGGGGATaGCACCGGGCTGCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: MCKMPRTYLAVALINFPWDGTRG*HRAAGE Trigger: TTCCCCAGCAGCCCGGTGCCATCCCCTTGTACCATC...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | AGCAGTCCTCTCACCTGGAATCAAGTTTTTCCTAATGAAGAAGAAAGGGACAGGGATGGGTGCCACCAGTaGGATGGTACAAGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSPLTWNQVFPNEEERDRDGCHQ*DGTRGW Trigger: CCATCCCCTTGTACCATCCCACTGGTGGCACCCATC...CCTGTCCCTTTCTTCTTCATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | AGCATTCTGACTTTCACTATCAACGTGATGCAAAGTGCTAGAATGGGGTGTGGGGTTGGGCACAGGAGCTaGCCCTGCCATCCACATTAT | + |
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Preference number: 4 (lower is better) Translates to: SILTFTINVMQSARMGCGVGHRS*PCHPHY Trigger: ATAATGTGGATGGCAGGGCCAGCTCCTGTGCCCAAC...CCCACACCCCATTCTAGCACTTTGCATCACGTTGATAGTGAAAGTCAGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | ATACATACACTGTCCTTAGTACAAGTCTGCTGGTCTTCCATAGTCCTCATTGATAACCAGGAGGGCAGTTaGGCACAGGAGCTGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: IHTLSLVQVCWSSIVLIDNQEGS*AQELAL Trigger: CAGGGCCAGCTCCTGTGCCCAACTGCCCTCCTGGTT...ATCAATGAGGACTATGGAAGACCAGCAGACTTGTACTAAGGACAGTGTATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR TCA 90 bp | AGCATTCTGACTTTCACTATCAACGTGATGCAAAGTGCTAGAATGGGGTGTGGGCAACAAAGCCAATGGTaGCCCCAGGAGGACATTGCA | + |
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Preference number: 4 (lower is better) Translates to: SILTFTINVMQSARMGCGQQSQW*PQEDIA Trigger: TGCAATGTCCTCCTGGGGTCACCATTGGCTTTGTTG...CCCACACCCCATTCTAGCACTTTGCATCACGTTGATAGTGAAAGTCAGAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | AACTTGTATGCATGTTGCAGAATGATGTTCTGGTGCACACAGACACACACACACACTGGATTGGATGGGTaGCACCAGTGGGATGGTACA | + |
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Preference number: 4 (lower is better) Translates to: NLYACCRMMFWCTQTHTHTGLDG*HQWDGT Trigger: TGTACCATCCCACTGGTGGCACCCATCCAATCCAGT...GTGTGTGTGTGTCTGTGTGCACCAGAACATCATTCTGCAACATGCATACAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGATTTCTTCTGTAGGTTaGTCAGGGGCTGTGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: MCKMPRTYLAVALINFPWISSVG*SGAVGT Trigger: GGTCCCCACAGCCCCTGAGCAACCTACAGAAGAAAT...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | ATACATACACTGTCCTTAGTACAAGTCTGCTGGTCTTCCATAGTCCTCATTGATTCCCATAGGCAAGCCTaGAGAAGGAGAGGCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: IHTLSLVQVCWSSIVLIDSHRQA*RRRGNW Trigger: CCAGTTGCCTCTCCTTCTGCAGGCTTGCCTATGGGA...ATCAATGAGGACTATGGAAGACCAGCAGACTTGTACTAAGGACAGTGTATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGTTCCAGCTCTTGTCTTaGACAGGGGCAGCAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: MCKMPRTYLAVALINFPWFQLLS*TGAAEA Trigger: TGCTTCTGCTGCCCCTGTGCAAGACAAGAGCTGGAA...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGCACTCTGCCATCCACATTATaGGAGCAGGCTGATTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: KRPVGYISSLRIIQPKSTLPSTL*EQADSS Trigger: TGACGAATCAGCCTGCTCCCATAATGTGGATGGCAG...AGTGCTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | AGTATGGAGCACAGAAATATGAAGCATTCTGACTTTCACTATCAACGTGATGCAAGGTTGGTACTGGATTaGATGGGTGCCACCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SMEHRNMKHSDFHYQRDARLVLD*MGATSG Trigger: CCCACTGGTGGCACCCATCCAATCCAGTACCAACCT...TGCATCACGTTGATAGTGAAAGTCAGAATGCTTCATATTTCTGTGCTCCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | ATAGCTCACATGCCTATAGCTGTAATGCTTGTATCTGTATATGTTTATTTGGCTCACAGGAGCTGGCCCTaGCATCCACATTATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IAHMPIAVMLVSVYVYLAHRSWP*HPHYGS Trigger: GCTCCCATAATGTGGATGGCAGGGCCAGCTCCTGTG...AGCCAAATAAACATATACAGATACAAGCATTACAGCTATAGGCATGTGAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTCCTCTCACCTGGAATCAAGTTTTTCCTAATGAAGAAGAAAGGGACAGGTCTTCTCATTCTGGATaGTATAAGAGGCTCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: SSPLTWNQVFPNEEERDRSSHSG*YKRLCT Trigger: TGTGCAGAGCCTCTTATAGCATCCAGAATGAGAAGA...CCTGTCCCTTTCTTCTTCATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| 3UTR CAA 72 bp | CAAACACACAACATGTGTAAGATGCCAAGAACTTATTaGGCTGTAGCTCTGATCAACTTTCCCTGGTACCCT | + |
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Preference number: 4 (lower is better) Translates to: QTHNMCKMPRTY*AVALINFPWYP Trigger: AGGGTACCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACATGTTGTGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR TCA 90 bp | AGCATTCTGACTTTCACTATCAACGTGATGCAAAGTGCTAGAATGGGGTGTGGGAGGCACAGCAGTTGGTaGTTTTATTTGATTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SILTFTINVMQSARMGCGRHSSW*FYLIFH Trigger: ATGGAAAATCAAATAAAATCACCAACTGCTGTGCCT...CCCACACCCCATTCTAGCACTTTGCATCACGTTGATAGTGAAAGTCAGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR TCA 90 bp | TTGTTTACCACGCAAAGCGTCACCAGTATTAAAGCAATGACAGGATTTACATATAGAGGCTCAACATGCTaGAGAACGTGTATGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LFTTQSVTSIKAMTGFTYRGSTC*RTCMLS Trigger: GGACAACATACACGTTCTTCAGCATGTTGAGCCTCT...ATATGTAAATCCTGTCATTGCTTTAATACTGGTGACGCTTTGCGTGGTAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | TTCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGAGAGCCGAAAATCATTaGTTTCATCTTCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: FKKACWLHLFSQDNSTQERAENH*FHLHIQ Trigger: CTGGATGTGAAGATGAAAGCAATGATTTTCGGCTCT...CTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CCA 90 bp | TTCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGAAGCGAATCTCAAAGTaGTCAGCATTTACCATCGTT | + |
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Preference number: 4 (lower is better) Translates to: FKKACWLHLFSQDNSTQEKRISK*SAFTIV Trigger: AACGATGGTAAATGCTGACCACTTTGAGATTCGCTT...CTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR GCA 90 bp | TTGTTTACCACGCAAAGCGTCACCAGTATTAAAGCAATGACAGGATTTACATATTCGTCACAGGATATTTaGCAGGTTGGTACTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: LFTTQSVTSIKAMTGFTYSSQDI*QVGTGL Trigger: CAATCCAGTACCAACCTGGCAAATATCCTGTGACGA...ATATGTAAATCCTGTCATTGCTTTAATACTGGTGACGCTTTGCGTGGTAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTCACATGCCTATAGCTGTAATGCTTGTATCTGTATATGTTTATTTGGCTCGCCATCTAGAGAGTTaGTCTCAAAAACAGAATCGG | + |
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Preference number: 4 (lower is better) Translates to: IAHMPIAVMLVSVYVYLARHLES*SQKQNR Trigger: CCGATTCTGTTTTTGAGATCAACTCTCTAGATGGCG...AGCCAAATAAACATATACAGATACAAGCATTACAGCTATAGGCATGTGAGCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 90 bp | GATTCGTCACAGGATATTTGCCAGGTTGGTACTGGATTGGATGGGTaGCACCAGTGGGATGGTACAAGGGGATGGCACCGGGCTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: DSSQDICQVGTGLDG*HQWDGTRGWHRAAG Trigger: CCCAGCAGCCCGGTGCCATCCCCTTGTACCATCCCACTGGTGGCACCCATCCAATCCAGTACCAACCTGGCAAATATCCTGTGACGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 90 bp | CAGGATATTTGCCAGGTTGGTACTGGATTGGATGGGTGCCACCAGTaGGATGGTACAAGGGGATGGCACCGGGCTGCTGGGGAATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: QDICQVGTGLDGCHQ*DGTRGWHRAAGECS Trigger: ACTACATTCCCCAGCAGCCCGGTGCCATCCCCTTGTACCATCCCACTGGTGGCACCCATCCAATCCAGTACCAACCTGGCAAATATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 90 bp | CAGGAGGGCAGTTGGGCACAGGAGCTGGCCCTGCCATCCACATTATaGGAGCAGGCTGATTCGTCACAGGATATTTGCCAGGTTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: QEGSWAQELALPSTL*EQADSSQDICQVGT Trigger: AGTACCAACCTGGCAAATATCCTGTGACGAATCAGCCTGCTCCCATAATGTGGATGGCAGGGCCAGCTCCTGTGCCCAACTGCCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS TCA 90 bp | TTGGGCACAGGAGCTGGCCCTGCCATCCACATTATGGGAGCAGGCTaGTTCGTCACAGGATATTTGCCAGGTTGGTACTGGATTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: LGTGAGPAIHIMGAG*FVTGYLPGWYWIGW Trigger: CCATCCAATCCAGTACCAACCTGGCAAATATCCTGTGACGAATCAGCCTGCTCCCATAATGTGGATGGCAGGGCCAGCTCCTGTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | GTGATGCAAAGTGCTAGAATGGGGTGTGGGTGGGCAAAGGACAGGCTTATACGTTTGCACTTCCAGCTCTaGTCTTGCACAGGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VMQSARMGCGWAKDRLIRLHFQL*SCTGAA Trigger: TGCTGCCCCTGTGCAAGACAAGAGCTGGAAGTGCAA...ACGTATAAGCCTGTCCTTTGCCCACCCACACCCCATTCTAGCACTTTGCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS TCA 90 bp | AAGAGGCTCTGCACAAGTTCCAGTGTTCTGCAACAAAGCCAATGGTaGCCCCAGGAGGACATTGCACTTCCAGCTCTTGTCTTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: KRLCTSSSVLQQSQW*PQEDIALPALVLHR Trigger: CCTGTGCAAGACAAGAGCTGGAAGTGCAATGTCCTCCTGGGGTCACCATTGGCTTTGTTGCAGAACACTGGAACTTGTGCAGAGCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 90 bp | CTCATTCTGGATGCTATAAGAGGCTCTGCACAAGTTCCAGTGTTCTaGAACAAAGCCAATGGTGACCCCAGGAGGACATTGCACTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LILDAIRGSAQVPVF*NKANGDPRRTLHFQ Trigger: CTGGAAGTGCAATGTCCTCCTGGGGTCACCATTGGCTTTGTTGCAGAACACTGGAACTTGTGCAGAGCCTCTTATAGCATCCAGAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | AGCAGTCCTCTCACCTGGAATCAAGTTTTTCCTAATGAAGAAGAAAGGGACAGGCATTTCTTCTGTAGGTaGCTCAGGGGCTGTGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SSPLTWNQVFPNEEERDRHFFCR*LRGCGD Trigger: GTCCCCACAGCCCCTGAGCAACCTACAGAAGAAATG...CCTGTCCCTTTCTTCTTCATTAGGAAAAACTTGATTCCAGGTGAGAGGACTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | ATACATACACTGTCCTTAGTACAAGTCTGCTGGTCTTCCATAGTCCTCATTGATCTTCCAGCTCTTGTCTaGCACAGGGGCAGCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: IHTLSLVQVCWSSIVLIDLPALV*HRGSRS Trigger: GCTTCTGCTGCCCCTGTGCAAGACAAGAGCTGGAAG...ATCAATGAGGACTATGGAAGACCAGCAGACTTGTACTAAGGACAGTGTATGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | AGTATGGAGCACAGAAATATGAAGCATTCTGACTTTCACTATCAACGTGATGCACAGGTTGGTACTGGATaGGATGGGTGCCACCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SMEHRNMKHSDFHYQRDAQVGTG*DGCHQW Trigger: CCACTGGTGGCACCCATCCAATCCAGTACCAACCTG...TGCATCACGTTGATAGTGAAAGTCAGAATGCTTCATATTTCTGTGCTCCATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 90 bp | GCTTTCATCTTCACATCCAGGGCCAAAGGGAAGCGAATCTCAAAGTaGTCAGCATTTACCATCGTTGATAAAAAGCCATTCCACTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AFIFTSRAKGKRISK*SAFTIVDKKPFHFL Trigger: AAGGAAGTGGAATGGCTTTTTATCAACGATGGTAAATGCTGACCACTTTGAGATTCGCTTCCCTTTGGCCCTGGATGTGAAGATGAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | TTCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGAGGATATTTGCCAGGTaGGTACTGGATTGGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: FKKACWLHLFSQDNSTQERIFAR*VLDWMG Trigger: ACCCATCCAATCCAGTACCAACCTGGCAAATATCCT...CTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGCTTCGTCACAGGATATTaGCCAGGTTGGTACTGGATT | + |
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Preference number: 5 (lower is better) Translates to: SKRPVGYISSLRIIQPKSFVTGY*PGWYWI Trigger: AATCCAGTACCAACCTGGCAAATATCCTGTGACGAA...GCTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 90 bp | TTCAAAGTACATGAAGTCAATGAGGAAGCAAGAGCCGAAAATCATTaGTTTCATCTTCACATCCAGGGCCAAAGGGAAGCGAATCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: FKVHEVNEEARAENH*FHLHIQGQREANLK Trigger: TTTGAGATTCGCTTCCCTTTGGCCCTGGATGTGAAGATGAAAGCAATGATTTTCGGCTCTTGCTTCCTCATTGACTTCATGTACTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGACGCCATCTAGAGAGTaGATCTCAAAAACAGAATCG | + |
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Preference number: 5 (lower is better) Translates to: MCKMPRTYLAVALINFPWTPSRE*ISKTES Trigger: CGATTCTGTTTTTGAGATCAACTCTCTAGATGGCGT...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | AAAAGGCCTGTTGGCTACATCTCTTCTCTCAGGATAATTCAACCCAAGAGCACTAAGAGCCGAAAATCATaGCTTTCATCTTCACATCCA | + |
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Preference number: 5 (lower is better) Translates to: KRPVGYISSLRIIQPKSTKSRKS*LSSSHP Trigger: TGGATGTGAAGATGAAAGCAATGATTTTCGGCTCTT...AGTGCTCTTGGGTTGAATTATCCTGAGAGAAGAGATGTAGCCAACAGGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | ATGTGTAAGATGCCAAGAACTTATTTGGCTGTAGCTCTGATCAACTTTCCCTGGCATCAGGCACAGCAGTaGGTGATTTTATTTGATTTT | + |
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Preference number: 5 (lower is better) Translates to: MCKMPRTYLAVALINFPWHQAQQ*VILFDF Trigger: AAAATCAAATAAAATCACCAACTGCTGTGCCTGATG...CCAGGGAAAGTTGATCAGAGCTACAGCCAAATAAGTTCTTGGCATCTTACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS-3UTR CAA 90 bp | ACGCAAAGCGTCACCAGTATTAAAGCAATGACAGGATTTACATATTCAGCTTTAACCATCTGGTCTATGTaGTTCTTGATGTCATATCTA | + |
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Preference number: 5 (lower is better) Translates to: TQSVTSIKAMTGFTYSALTIWSM*FLMSYL Trigger: TAGATATGACATCAAGAACAACATAGACCAGATGGT...TAAAGCTGAATATGTAAATCCTGTCATTGCTTTAATACTGGTGACGCTTTGCGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 72 bp | TGCCAGGTTGGTACTGGATTGGATGGGTGCCACCAGTaGGATGGTACAAGGGGATGGCACCGGGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CQVGTGLDGCHQ*DGTRGWHRAAG Trigger: CCCAGCAGCCCGGTGCCATCCCCTTGTACCATCCCACTGGTGGCACCCATCCAATCCAGTACCAACCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 72 bp | GGTTGGTACTGGATTGGATGGGTGCCACCAGTGGGATaGTACAAGGGGATGGCACCGGGCTGCTGGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: GWYWIGWVPPVG*YKGMAPGCWGM Trigger: CATTCCCCAGCAGCCCGGTGCCATCCCCTTGTACCATCCCACTGGTGGCACCCATCCAATCCAGTACCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS TCA 72 bp | GGAGCTGGCCCTGCCATCCACATTATGGGAGCAGGCTaGTTCGTCACAGGATATTTGCCAGGTTGGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: GAGPAIHIMGAG*FVTGYLPGWYW Trigger: CCAGTACCAACCTGGCAAATATCCTGTGACGAATCAGCCTGCTCCCATAATGTGGATGGCAGGGCCAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 72 bp | TCTGCAACAAAGCCAATGGTGACCCCAGGAGGACATTaGACTTCCAGCTCTTGTCTTGCACAGGGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SATKPMVTPGGH*TSSSCLAQGQQ Trigger: CTGCTGCCCCTGTGCAAGACAAGAGCTGGAAGTGCAATGTCCTCCTGGGGTCACCATTGGCTTTGTTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 72 bp | AGTTGGGCACAGGAGCTGGCCCTGCCATCCACATTATaGGAGCAGGCTGATTCGTCACAGGATATTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SWAQELALPSTL*EQADSSQDICQ Trigger: CTGGCAAATATCCTGTGACGAATCAGCCTGCTCCCATAATGTGGATGGCAGGGCCAGCTCCTGTGCCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CAA 72 bp | GGGAGCAGGCTGATTCGTCACAGGATATTTGCCAGGTaGGTACTGGATTGGATGGGTGCCACCAGTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: GSRLIRHRIFAR*VLDWMGATSGM Trigger: CATCCCACTGGTGGCACCCATCCAATCCAGTACCAACCTGGCAAATATCCTGTGACGAATCAGCCTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CAA 72 bp | TTCTGCAACAAAGCCAATGGTGACCCCAGGAGGACATaGCACTTCCAGCTCTTGTCTTGCACAGGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FCNKANGDPRRT*HFQLLSCTGAA Trigger: TGCTGCCCCTGTGCAAGACAAGAGCTGGAAGTGCAATGTCCTCCTGGGGTCACCATTGGCTTTGTTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 72 bp | GATGCTATAAGAGGCTCTGCACAAGTTCCAGTGTTCTaGAACAAAGCCAATGGTGACCCCAGGAGGACATTG | + |
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Preference number: 6 (lower is better) Translates to: DAIRGSAQVPVF*NKANGDPRRTL Trigger: CAATGTCCTCCTGGGGTCACCATTGGCTTTGTTGCAGAACACTGGAACTTGTGCAGAGCCTCTTATAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 72 bp | GATCTCAAAAACAGAATCGGAGCCACAGCCGTAGGTTaGACACGGACCCCTCACTCTCATCATACTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: DLKNRIGATAVG*TRTPHSHHTLF Trigger: AAAGAGAGTATGATGAGAGTGAGGGGTCCGTGTGCAACCTACGGCTGTGGCTCCGATTCTGTTTTTGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 72 bp | CATGAAGTCAATGAGGAAGCAAGAGCCGAAAATCATTaGTTTCATCTTCACATCCAGGGCCAAAGGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: HEVNEEARAENH*FHLHIQGQREA Trigger: CGCTTCCCTTTGGCCCTGGATGTGAAGATGAAAGCAATGATTTTCGGCTCTTGCTTCCTCATTGACTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS GCA 72 bp | TCTCTTTCTTCTCATTCTGGATGCTATAAGAGGCTCTaGACAAGTTCCAGTGTTCTGCAACAAAGCCAATGG | + |
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Preference number: 6 (lower is better) Translates to: SLSSHSGCYKRL*TSSSVLQQSQW Trigger: CCATTGGCTTTGTTGCAGAACACTGGAACTTGTGCAGAGCCTCTTATAGCATCCAGAATGAGAAGAAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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| CDS CCA 72 bp | TTCACATCCAGGGCCAAAGGGAAGCGAATCTCAAAGTaGTCAGCATTTACCATCGTTGATAAAAAGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: FTSRAKGKRISK*SAFTIVDKKPF Trigger: GAATGGCTTTTTATCAACGATGGTAAATGCTGACCACTTTGAGATTCGCTTCCCTTTGGCCCTGGATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034941.9 |
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