Pregenerated sensors for PLSCR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019461Ensembl transcript IDs: ENSMUST00000019605.4, ENSMUST00000108632.8, ENSMUST00000108633.9, ENSMUST00000152566.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTaGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAAGGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: LQKAPAGPRGLGSWH*GPTATAISEEARIP Trigger: GGGGATCCTTGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CCA 90 bp | AGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTaGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RKLQKAPAGPRGLGS*HWGPTATAISEEAR Trigger: CCTTGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR TCA 90 bp | CAGTGGGACCTGTCAGCAGCCAGTCGCTACATCCTAGCCCGGTCCTaGACTCTGTATCCTCAGGGATGGACACCAGCATGGGTTACCTGG | + |
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Preference number: 1 (lower is better) Translates to: QWDLSAASRYILARS*TLYPQGWTPAWVTW Trigger: CCAGGTAACCCATGCTGGTGTCCATCCCTGAGGATACAGAGTTCAGGACCGGGCTAGGATGTAGCGACTGGCTGCTGACAGGTCCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR GCA 90 bp | CCTCCGCAGGTAGAGCTGAGTGTGCATGGTGTCACCTACCAGGAGTaGCAAGTGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PPQVELSVHGVTYQE*QVALRTTGGDVASA Trigger: AGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCACTTGGCACTCCTGGTAGGTGACACCATGCACACTCAGCTCTACCTGCGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR CCA 90 bp | TCTTCCACCTTAGTAACCGGTCCCGAGCAGACTGTCGTCGCATCCTaGAGCATCACCAGTGGGACCTGTCAGCAGCCAGTCGCTACATCC | + |
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Preference number: 1 (lower is better) Translates to: SSTLVTGPEQTVVAS*SITSGTCQQPVATS Trigger: GGATGTAGCGACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGACGACAGTCTGCTCGGGACCGGTTACTAAGGTGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR GCA 90 bp | CGGCCACCCTCGTCGGTCCGCCGCAGTGTATATCAAGGAAAGGGTTaGTTCAGGAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCT | + |
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Preference number: 1 (lower is better) Translates to: RPPSSVRRSVYQGKG*FRRERPGQLTILNS Trigger: AGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTCCTGAAGCAACCCTTTCCTTGATATACACTGCGGCGGACCGACGAGGGTGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR GCA 90 bp | TGTGGCTTCTGCTATCCGGAACCTCAAGGTAACGCTAACCCCTTCTaGAGGTTCCCCAGTCGCCTGTTTGGCCCACTAGTGGTCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CGFCYPEPQGNANPF*RFPSRLFGPLVVSC Trigger: ACAGCTGACCACTAGTGGGCCAAACAGGCGACTGGGGAACCTGCAGAAGGGGTTAGCGTTACCTTGAGGTTCCGGATAGCAGAAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR GCA 90 bp | GGAGTGCCAAGTGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTaGTATCCGGAACCTCAAGGTAACGCTAACCCCTTCTGCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: GVPSGTQNHWGRCGF*YPEPQGNANPFCRF Trigger: GAACCTGCAGAAGGGGTTAGCGTTACCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCACTTGGCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR CCA 90 bp | GCATGGTGTCACCTACCAGGAGTGCCAAGTGGCACTCAGAACCACTaGGGGAGATGTGGCTTCTGCTATCCGGAACCTCAAGGTAACGCT | + |
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Preference number: 1 (lower is better) Translates to: AWCHLPGVPSGTQNH*GRCGFCYPEPQGNA Trigger: AGCGTTACCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCACTTGGCACTCCTGGTAGGTGACACCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR CCA 90 bp | AGGGCACTCAGGTACTGGCTAATGCTTCCTCCGAGCCCTGCTCCTTaGCCTCTGAAGGGACCAAGACCAAGTCCACTCTGCCTACTATAT | + |
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Preference number: 1 (lower is better) Translates to: RALRYWLMLPPSPAP*PLKGPRPSPLCLLY Trigger: ATATAGTAGGCAGAGTGGACTTGGTCTTGGTCCCTTCAGAGGCCAAGGAGCAGGGCTCGGAGGAAGCATTAGCCAGTACCTGAGTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR TCA 90 bp | CCCCGAGTGGCAGAGGAAGGTTGTAGAGGTGAGGGCTCACTGAAATaGCTTTATGTTCAAAGGGCCTGTAGGTTGACACAAGGGCTAAAC | + |
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Preference number: 1 (lower is better) Translates to: PRVAEEGCRGEGSLK*LYVQRACRLTQGLN Trigger: GTTTAGCCCTTGTGTCAACCTACAGGCCCTTTGAACATAAAGTCATTTCAGTGAGCCCTCACCTCTACAACCTTCCTCTGCCACTCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR TCA 90 bp | AGACCAAGTCCACTCTGCCTACTATATTCCCAATTGAACAGGACTTaGAAGAAAAAGCTTTGGAGGAGGCCTCTACTCACTACAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: RPSPLCLLYSQLNRT*KKKLWRRPLLTTDK Trigger: CTTGTCTGTAGTGAGTAGAGGCCTCCTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGGGAATATAGTAGGCAGAGTGGACTTGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCAGATGCCCCTGCCTATaGAGAGGCCCCAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TRRAQGLRELALGPNRYSRCPCL*RGPRGR Trigger: CCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCT...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CAA 90 bp | GGAGCACCTGGAGCCAGCAAAGCCACTGTCCCCTCTGGAGGTCCCTaGTCAGACCCCGAGTGGCAGAGGAAGGTTGTAGAGGTGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GAPGASKATVPSGGP*SDPEWQRKVVEVRA Trigger: AGCCCTCACCTCTACAACCTTCCTCTGCCACTCGGGGTCTGACAAGGGACCTCCAGAGGGGACAGTGGCTTTGCTGGCTCCAGGTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCAGATTCCAGATGCCCCTaGCTATGCAGAGGCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AQEAAESTRRAQGLRELADSRCP*LCRGPR Trigger: TCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATC...TGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCAGTCCAGGATTCCAGATaGCCCTGCCTATGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AQEAAESTRRAQGLRELAVQDSR*PCLCRG Trigger: GCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGAC...TGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACGGTGTCTGCCATCTTTaGTACTGCTTGCCTTTTACC | + |
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Preference number: 2 (lower is better) Translates to: STRRAQGLRELALGPNRYGVCHL*YCLPFT Trigger: GGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACC...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCGGTGTCTGCCATCTTTaGTACTGCTTGCCTTTTACC | + |
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Preference number: 2 (lower is better) Translates to: TRRAQGLRELALGPNRYSGVCHL*YCLPFT Trigger: GGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACC...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCAAAGCCACTGTCCCCTCTGGAGGTCCCTTGTCAGACCCCGAGTGGCACCACTGGGGGAGATGTaGCTTCTGCTATCCGGAACC | + |
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Preference number: 2 (lower is better) Translates to: SQQSHCPLWRSLVRPRVAPLGEM*LLLSGT Trigger: GGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGG...TGCCACTCGGGGTCTGACAAGGGACCTCCAGAGGGGACAGTGGCTTTGCTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCTGCAGGTTCCCCAGTCGCCTGTTTGGCCCACTAGTGGTCAGCTGTCCTGTCCAGGATTCCAGATaGCCCTGCCTATGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PFCRFPSRLFGPLVVSCPVQDSR*PCLCRG Trigger: GCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGAC...AGGACAGCTGACCACTAGTGGGCCAAACAGGCGACTGGGGAACCTGCAGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACATCTTTGGTACTGCTTaGCTTTTACCCACAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: STRRAQGLRELALGPNRYIFGTA*LLPTSP Trigger: AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGAT...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCACTAATTGGCTAAAGTaGCATAAGGGAAGGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TRRAQGLRELALGPNRYSTNWLK*HKGRVV Trigger: CACCACCCTTCCCTTATGGCACTTTAGCCAATTAGT...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACACTAATTGGCTAAAGTaGCATAAGGGAAGGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: STRRAQGLRELALGPNRYTNWLK*HKGRVV Trigger: CACCACCCTTCCCTTATGGCACTTTAGCCAATTAGT...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCGACCATCTTAAATTCTaGTCAAGGAGATGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TRRAQGLRELALGPNRYSDHLKF*SRRWVS Trigger: GGAGACCCATCTCCTTGACCAGAATTTAAGATGGTC...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAAGCAGGGAAGGGATaGGACACAACGGCTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: PRGLGSWHWGPTATAISEEAGKG*DTTAPN Trigger: GTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTC...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAGTCCAGGATTCCAGATaGCCCTGCCTATGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLGSWHWGPTATAISEEAVQDSR*PCLCRG Trigger: GCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGAC...TGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAGAAGCAGGGAAGGGATaGGACACAACGGCTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GLGSWHWGPTATAISEEAEAGKG*DTTAPN Trigger: GTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTC...TGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGATGTGTGCACAGGCACTaGCTGGAGATGGTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGCVHRH*LEMVNR Trigger: TCTGTTCACCATCTCCAGGCAGTGCCTGTGCACACA...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CAA 90 bp | TCGGCCACCCTCGTCGGTCCGCCGCAGTGTATATCAAGGAAAGGGTaGCTTCAGGAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTC | + |
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Preference number: 2 (lower is better) Translates to: SATLVGPPQCISRKG*LQEGTSRAADHLKF Trigger: GAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTCCTGAAGCAACCCTTTCCTTGATATACACTGCGGCGGACCGACGAGGGTGGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGACTGCCTGGAGATGGTaGACAGAAGGAGGAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: RGLGSWHWGPTATAISEETAWRW*TEGGTG Trigger: ACCTGTTCCTCCTTCTGTTCACCATCTCCAGGCAGT...CTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGAACAGGTCTCATACATaGTCTTCTGCAGGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: PRGLGSWHWGPTATAISENRSHT*SSAGPQ Trigger: CTGTGGCCCTGCAGAAGAGCATGTATGAGACCTGTT...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTAGATGCCCCTGCCTATaGAGAGGCCCCAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GRVVSAIFGTACLLPTSPRCPCL*RGPRGR Trigger: CCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCT...AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAACTCTGTATCCTCAGGGATGGACACCAGCATGGGTTACCTGGTCCACGATTCCAGATGCCCCTaGCTATGCAGAGGCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLNSVSSGMDTSMGYLVHDSRCP*LCRGPR Trigger: TCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATC...GTGGACCAGGTAACCCATGCTGGTGTCCATCCCTGAGGATACAGAGTTCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGGGGAACAGGTCTCATACATaGTCTTCTGCAGGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: GWCLPSLVLLAFYPQALGNRSHT*SSAGPQ Trigger: CTGTGGCCCTGCAGAAGAGCATGTATGAGACCTGTT...CCCCAGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGAGACCATCTTAAATTCTaGTCAAGGAGATGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGDHLKF*SRRWVS Trigger: GGAGACCCATCTCCTTGACCAGAATTTAAGATGGTC...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | GTCGCATCCTGGAGCATCACCAGTGGGACCTGTCAGCAGCCAGTCGCTACATCCGACCATCTTAAATTCTaGTCAAGGAGATGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VASWSITSGTCQQPVATSDHLKF*SRRWVS Trigger: GGAGACCCATCTCCTTGACCAGAATTTAAGATGGTC...GGATGTAGCGACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGGGGTATCATACATGCTCTTCTaGAGGGCCACAGGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VVSAIFGTACLLPTSPGVSYMLF*RATGEA Trigger: TGCTTCTCCTGTGGCCCTGCAGAAGAGCATGTATGA...TACCCCAGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCTCATACATGCTCTTCTaGAGGGCCACAGGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: REGWCLPSLVLLAFYPQASYMLF*RATGEA Trigger: TGCTTCTCCTGTGGCCCTGCAGAAGAGCATGTATGA...GGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCAAAGCCACTGTCCCCTCTGGAGGTCCCTTGTCAGACCCCGAGTGGCAGGTCCAGAATCACTATaGGTGATGAAAACTAACTTT | + |
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Preference number: 2 (lower is better) Translates to: SQQSHCPLWRSLVRPRVAGPESL*VMKTNF Trigger: AAAGTTAGTTTTCATCACCCATAGTGATTCTGGACC...TGCCACTCGGGGTCTGACAAGGGACCTCCAGAGGGGACAGTGGCTTTGCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR TCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTACTGCCTGGAGATGGTaGACAGAAGGAGGAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGTAWRW*TEGGTG Trigger: ACCTGTTCCTCCTTCTGTTCACCATCTCCAGGCAGT...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR-3UTR GCA 90 bp | CCGCTACAGCTATTAGTGAGGAGGCAAGGATCCCCTCAGAGTGCCACAATCGGAATCTTTGGTACTGCTTaGCTTTTACCCACAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PLQLLVRRQGSPQSATIGIFGTA*LLPTSP Trigger: AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGAT...TCCGATTGTGGCACTCTGAGGGGATCCTTGCCTCCTCACTAATAGCTGTAGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CAA 90 bp | TATGTTCAAAGGGCCTGTAGGTTGACACAAGGGCTAAACAAAGATTaGTCCTCCGCAGGTAGAGCTGAGTGTGCATGGTGTCACCTACCA | + |
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Preference number: 2 (lower is better) Translates to: YVQRACRLTQGLNKD*SSAGRAECAWCHLP Trigger: TGGTAGGTGACACCATGCACACTCAGCTCTACCTGCGGAGGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACAGGCCCTTTGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGACTGCCTGGAGATGGTaGACAGAAGGAGGAACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: YEYNIQRHSLLPTVGEGRTAWRW*TEGGTG Trigger: ACCTGTTCCTCCTTCTGTTCACCATCTCCAGGCAGT...CCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGGTTGACACAAGGGCTAAACAAAGATTTGTCCTCCGCAGGTAGAGCTGAGGGTCCACTTAGGGCTTaGCCTTACGGACTAATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CRLTQGLNKDLSSAGRAEGPLRA*PYGLIR Trigger: TCTGATTAGTCCGTAAGGCCAAGCCCTAAGTGGACC...CTCAGCTCTACCTGCGGAGGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CAA 90 bp | AGCTACTTCCCTAAACTCTATGGGGCACCCAACTTAGATATTGACTaGGGAGCTGCTCTGGTTTGGTCCAGAATCACTATGGGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: SYFPKLYGAPNLDID*GAALVWSRITMGDE Trigger: TTCATCACCCATAGTGATTCTGGACCAAACCAGAGCAGCTCCCAAGTCAATATCTAAGTTGGGTGCCCCATAGAGTTTAGGGAAGTAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CAA 90 bp | AAGACCAAGTCCACTCTGCCTACTATATTCCCAATTGAACAGGACTaGAAAGAAAAAGCTTTGGAGGAGGCCTCTACTCACTACAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: KTKSTLPTIFPIEQD*KEKALEEASTHYRQ Trigger: TTGTCTGTAGTGAGTAGAGGCCTCCTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGGGAATATAGTAGGCAGAGTGGACTTGGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAGAAAAAGCTTTGGAGGAGGCCTCTACTCACTACAGACAAGGATCAAGTACTAATTGGCTAAAGTaGCATAAGGGAAGGGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LKEKALEEASTHYRQGSSTNWLK*HKGRVV Trigger: CACCACCCTTCCCTTATGGCACTTTAGCCAATTAGT...ACTTGATCCTTGTCTGTAGTGAGTAGAGGCCTCCTCCAAAGCTTTTTCTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CCA 72 bp | CGAGCAGACTGTCGTCGCATCCTGGAGCATCACCAGTaGGACCTGTCAGCAGCCAGTCGCTACATCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RADCRRILEHHQ*DLSAASRYILA Trigger: GGCTAGGATGTAGCGACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGACGACAGTCTGCTCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR GCA 72 bp | GGCACTCAGGTACTGGCTAATGCTTCCTCCGAGCCCTaGTCCTTGGCCTCTGAAGGGACCAAGACCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTQVLANASSEP*SLASEGTKTKS Trigger: GGACTTGGTCTTGGTCCCTTCAGAGGCCAAGGAGCAGGGCTCGGAGGAAGCATTAGCCAGTACCTGAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CCA 72 bp | TTAGTAACCGGTCCCGAGCAGACTGTCGTCGCATCCTaGAGCATCACCAGTGGGACCTGTCAGCAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVTGPEQTVVAS*SITSGTCQQPV Trigger: GACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGACGACAGTCTGCTCGGGACCGGTTACTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR TCA 72 bp | CTGTCAGCAGCCAGTCGCTACATCCTAGCCCGGTCCTaGACTCTGTATCCTCAGGGATGGACACCAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSAASRYILARS*TLYPQGWTPAW Trigger: CCATGCTGGTGTCCATCCCTGAGGATACAGAGTTCAGGACCGGGCTAGGATGTAGCGACTGGCTGCTGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTCAGCTGTCCTACCTCCTGCTCACACAGGTAGACCAGCTCTTCCACCTTCTGACGCCGCTCCCTTaGTGTTATCCGGTATCTACC | + |
|
Preference number: 3 (lower is better) Translates to: SGQLSYLLLTQVDQLFHLLTPLP*CYPVST Trigger: GGTAGATACCGGATAACACAAAGGGAGCGGCGTCAG...AAGGTGGAAGAGCTGGTCTACCTGTGTGAGCAGGAGGTAGGACAGCTGACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR GCA 72 bp | AGTGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTaGTATCCGGAACCTCAAGGTAACGCTAACCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGTQNHWGRCGF*YPEPQGNANPF Trigger: GAAGGGGTTAGCGTTACCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGGGGATATCAAGGAAAGGGTaGCTTCAGGAGGGAACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GWCLPSLVLLAFYPQALGISRKG*LQEGTS Trigger: GGACGTTCCCTCCTGAAGCAACCCTTTCCTTGATAT...CCCCAGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | GACGCCGCTCCCTTTGTGTTATCCGGTATCTACCCTCTCCCATCACATCCGGCTCATCTTTGGTACTGCTaGCCTTTTACCCACAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DAAPFVLSGIYPLPSHPAHLWYC*PFTHKP Trigger: GGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATG...AGCCGGATGTGATGGGAGAGGGTAGATACCGGATAACACAAAGGGAGCGGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTATATCAAGGAAAGGGTaGCTTCAGGAGGGAACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRVVSAIFGTACLLPTSPISRKG*LQEGTS Trigger: GGACGTTCCCTCCTGAAGCAACCCTTTCCTTGATAT...AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTCAGCTGTCCTACCTCCTGCTCACACAGGTAGACCAGCTCTTCCACCTTTGGTGTCTGCCATCTTaGGTACTGCTTGCCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SGQLSYLLLTQVDQLFHLWCLPS*VLLAFY Trigger: GTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCA...AAGGTGGAAGAGCTGGTCTACCTGTGTGAGCAGGAGGTAGGACAGCTGACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTCAGCTGTCCTACCTCCTGCTCACACAGGTAGACCAGCTCTTCCACCTTAACTTAGATATTGACTaGGGAGCTGCTCTGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGQLSYLLLTQVDQLFHLNLDID*GAALVW Trigger: CCAAACCAGAGCAGCTCCCAAGTCAATATCTAAGTT...AAGGTGGAAGAGCTGGTCTACCTGTGTGAGCAGGAGGTAGGACAGCTGACCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTGCTATCCGGAACCTCAAGGCCAATTGAACAGGACTaGAAAGAAAAAGCTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WHSEPLGEMWLLLSGTSRPIEQD*KEKALE Trigger: CTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGG...CCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR TCA 72 bp | GCAGAGGAAGGTTGTAGAGGTGAGGGCTCACTGAAATaGCTTTATGTTCAAAGGGCCTGTAGGTTGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: AEEGCRGEGSLK*LYVQRACRLTQ Trigger: TTGTGTCAACCTACAGGCCCTTTGAACATAAAGTCATTTCAGTGAGCCCTCACCTCTACAACCTTCCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR TCA 72 bp | CCACTCTGCCTACTATATTCCCAATTGAACAGGACTTaGAAGAAAAAGCTTTGGAGGAGGCCTCTACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PLCLLYSQLNRT*KKKLWRRPLLT Trigger: AGTGAGTAGAGGCCTCCTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGGGAATATAGTAGGCAGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR TCA 72 bp | CAAGACCAAGTCCACTCTGCCTACTATATTCCCAATTaGACAGGACTTGAAAGAAAAAGCTTTGGAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDQVHSAYYIPN*TGLERKSFGGG Trigger: GCCTCCTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGGGAATATAGTAGGCAGAGTGGACTTGGTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACCTCCCCACTGCTTGCTaGTGCGGCCCACACTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: STRRAQGLRELALGPNRYLPTAC*CGPHFA Trigger: CGCGAAGTGTGGGCCGCATCAGCAAGCAGTGGGGAG...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCAGCCCTCCCCACTaGTTGCTGATGCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: STRRAQGLRELALGPNRYSSPPH*LLMRPT Trigger: TGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCTGCT...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTGGAGCCACTGGGCCTaGCGAGGGGAAGAGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRRAQGLRELALGPNRYSWSHWA*RGEESE Trigger: TTCGCTCTCTTCCCCTCGCCAGGCCCAGTGGCTCCA...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | GCACAGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTCCCCACTGCTTGCTaGTGCGGCCCACACTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AQEAAESTRRAQGLRELALPTAC*CGPHFA Trigger: CGCGAAGTGTGGGCCGCATCAGCAAGCAGTGGGGAG...TGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | AGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACGATGGCAGAGGGTCCTaGGCCTCCTCTCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: STRRAQGLRELALGPNRYDGRGS*ASSLLE Trigger: TTCGAGAAGAGAGGAGGCGCAGGACCCTCTGCCATC...GTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GCACAGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCAGCAGGGGCAGGCACCTaGGTGGGCACTGGAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQEAAESTRRAQGLRELAAGAGT*VGTGAC Trigger: ACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGC...TGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CCACAGGAGAAGCAGGGAAGGGATGGGACACAACGGCTCCCAACCACTCGGCCACACCTGGGTGGGCACTaGAGCTTGTCCCGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQEKQGRDGTQRLPTTRPHLGGH*SLSRSR Trigger: CCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTG...TGGCCGAGTGGTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTCTCCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGAGGGCAGGCACCTGGGTaGGCACTGGAGCTTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGGQAPG*ALELVP Trigger: CGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCC...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGAAGGCCCTGGAGCCACTaGGCCTGGCGAGGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGRPWSH*AWRGEE Trigger: CTCTTCCCCTCGCCAGGCCCAGTGGCTCCAGGGCCT...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGCAGCTGCAGCCACAATaGAGTGGGCGGAGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLGSWHWGPTATAISEQLQPQ*SGRRSR Trigger: CCGGCTCCTCCGCCCACTTCATTGTGGCTGCAGCTG...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GTCGCATCCTGGAGCATCACCAGTGGGACCTGTCAGCAGCCAGTCGCTACATCCCACCTGGGTGGGCACTaGAGCTTGTCCCGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VASWSITSGTCQQPVATSHLGGH*SLSRSR Trigger: CCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTG...GGATGTAGCGACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGATGTCCCGGTCCAGGATaGAGAGCCACCGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGCPGPG*RATGSG Trigger: TCCAGAGCCGGTGGCTCTGCATCCTGGACCGGGACA...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | CCACAGGAGAAGCAGGGAAGGGATGGGACACAACGGCTCCCAACCACTCGGCCACACAGGGGCAGCAGCTaGAGCCACAATGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQEKQGRDGTQRLPTTRPHRGSS*SHNEVG Trigger: GCCCACTTCATTGTGGCTGCAGCTGCTGCCCCTGTG...TGGCCGAGTGGTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTCTCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | ACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTTAGGAAGGAAGGGATaGCAGGTCTGTAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRAQGLRELALGPNRYSLGRKG*QVCSTW Trigger: CCATGTGCTACAGACCTGGCATCCCTTCCTTCCTAA...GCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAGCAGGGGCAGGCACCTaGGTGGGCACTGGAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGSWHWGPTATAISEEAAGAGT*VGTGAC Trigger: ACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGC...TGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGGAGAAGCAGGGAAGGGATGGGACACAACGGCTCCCAACCACTCGGCCAGTAGCACATGGCCAATaGTGGTGCCAGGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQEKQGRDGTQRLPTTRPVAHGQ*WCQVEP Trigger: AGGCTCCACCTGGCACCACCATTGGCCATGTGCTAC...TGGCCGAGTGGTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTCTCCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGCTCTCTTCAGCTGCCTaGCCCAGTTGCTGTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRGLGSWHWGPTATAISELSSAA*PSCCPV Trigger: AACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAG...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGTGGACTTCCATCTCCTaGAGACCACAGGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLGSWHWGPTATAISEWTSIS*RPQGQQ Trigger: CTGCTGCCCCTGTGGTCTTCAGGAGATGGAAGTCCA...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | CCGCTACAGCTATTAGTGAGGAGGCAAGGATCCCCTCAGAGTGCCACAATCGGACTCCCCACTGCTTGCTaGTGCGGCCCACACTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQLLVRRQGSPQSATIGLPTAC*CGPHFA Trigger: CGCGAAGTGTGGGCCGCATCAGCAAGCAGTGGGGAG...TCCGATTGTGGCACTCTGAGGGGATCCTTGCCTCCTCACTAATAGCTGTAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGCACAGGGGCAGCAGCTaGAGCCACAATGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGSWHWGPTATAISEEHRGSS*SHNEVG Trigger: GCCCACTTCATTGTGGCTGCAGCTGCTGCCCCTGTG...CTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | GACGCCGCTCCCTTTGTGTTATCCGGTATCTACCCTCTCCCATCACATCCGGCTAGCAGCCCTCCCCACTaGTTGCTGATGCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DAAPFVLSGIYPLPSHPASSPPH*LLMRPT Trigger: TGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCTGCT...AGCCGGATGTGATGGGAGAGGGTAGATACCGGATAACACAAAGGGAGCGGCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCACTCTGGATACCCAGATaGCACGGGGTAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGSWHWGPTATAISEEALWIPR*HGVGRW Trigger: CCACCTCCCTACCCCGTGCCATCTGGGTATCCAGAG...TGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCAAAGCCACTGTCCCCTCTGGAGGTCCCTTGTCAGACCCCGAGTGGCACAGGTCTGTAGCACATaGCCAATGGTGGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQSHCPLWRSLVRPRVAQVCST*PMVVPG Trigger: ACCTGGCACCACCATTGGCCATGTGCTACAGACCTG...TGCCACTCGGGGTCTGACAAGGGACCTCCAGAGGGGACAGTGGCTTTGCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | CGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATGGGCAGGCACCTGGGTaGGCACTGGAGCTTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPGQLTILNSGQGDGSPHGQAPG*ALELVP Trigger: CGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCC...ATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTGAACTCTGTATCCTCAGGGATGGACACCAGCATGGGTTACCTGGTCCACTGGAGCCACTGGGCCTaGCGAGGGGAAGAGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLNSVSSGMDTSMGYLVHWSHWA*RGEESE Trigger: TTCGCTCTCTTCCCCTCGCCAGGCCCAGTGGCTCCA...GTGGACCAGGTAACCCATGCTGGTGTCCATCCCTGAGGATACAGAGTTCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATAGGCCCTGGAGCCACTaGGCCTGGCGAGGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGQLTILNSGQGDGSPHRPWSH*AWRGEE Trigger: CTCTTCCCCTCGCCAGGCCCAGTGGCTCCAGGGCCT...ATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | TGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTGCTATCCGGAACCTCAAGGGCACATGGCCAATGGTaGTGCCAGGTGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHSEPLGEMWLLLSGTSRAHGQW*CQVEPG Trigger: TCCAGGCTCCACCTGGCACCACCATTGGCCATGTGC...CCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGACAGGTCTGTAGCACATaGCCAATGGTGGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGQVCST*PMVVPG Trigger: ACCTGGCACCACCATTGGCCATGTGCTACAGACCTG...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CCCAGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGCAGGTCTGTAGCACATaGCCAATGGTGGTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGLGSWHWGPTATAISEQVCST*PMVVPG Trigger: ACCTGGCACCACCATTGGCCATGTGCTACAGACCTG...CTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | GACGCCGCTCCCTTTGTGTTATCCGGTATCTACCCTCTCCCATCACATCCGGCTTGGACTTCCATCTCCTaGAGACCACAGGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAAPFVLSGIYPLPSHPAWTSIS*RPQGQQ Trigger: CTGCTGCCCCTGTGGTCTTCAGGAGATGGAAGTCCA...AGCCGGATGTGATGGGAGAGGGTAGATACCGGATAACACAAAGGGAGCGGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | TGGCACTCAGAACCACTGGGGGAGATGTGGCTTCTGCTATCCGGAACCTCAAGGGATGGCAGAGGGTCCTaGGCCTCCTCTCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WHSEPLGEMWLLLSGTSRDGRGS*ASSLLE Trigger: TTCGAGAAGAGAGGAGGCGCAGGACCCTCTGCCATC...CCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTCTGAGTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTAGGCCCTGGAGCCACTaGGCCTGGCGAGGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGRPWSH*AWRGEE Trigger: CTCTTCCCCTCGCCAGGCCCAGTGGCTCCAGGGCCT...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CAA 72 bp | CTCGTCGGTCCGCCGCAGTGTATATCAAGGAAAGGGTaGCTTCAGGAGGGAACGTCCAGGGCAGCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGPPQCISRKG*LQEGTSRAADH Trigger: ATGGTCAGCTGCCCTGGACGTTCCCTCCTGAAGCAACCCTTTCCTTGATATACACTGCGGCGGACCGACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| 3UTR CAA 72 bp | CAGGTACTGGCTAATGCTTCCTCCGAGCCCTGCTCCTaGGCCTCTGAAGGGACCAAGACCAAGTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLANASSEPCS*ASEGTKTKSTL Trigger: CAGAGTGGACTTGGTCTTGGTCCCTTCAGAGGCCAAGGAGCAGGGCTCGGAGGAAGCATTAGCCAGTACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | CTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATCCTGAGGTGGCTCAGCTGCAGCCACAATaGAGTGGGCGGAGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTILNSGQGDGSPHPEVAQLQPQ*SGRRSR Trigger: CCGGCTCCTCCGCCCACTTCATTGTGGCTGCAGCTG...AGCCACCTCAGGATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR GCA 90 bp | GTCGCATCCTGGAGCATCACCAGTGGGACCTGTCAGCAGCCAGTCGCTACATCCTTAGGAAGGAAGGGATaGCAGGTCTGTAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VASWSITSGTCQQPVATSLGRKG*QVCSTW Trigger: CCATGTGCTACAGACCTGGCATCCCTTCCTTCCTAA...GGATGTAGCGACTGGCTGCTGACAGGTCCCACTGGTGATGCTCCAGGATGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | CTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATCCTGAGGTGGCTCACCTGGGTGGGCACTaGAGCTTGTCCCGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTILNSGQGDGSPHPEVAHLGGH*SLSRSR Trigger: CCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTG...AGCCACCTCAGGATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCAGGCACCCCTGGCAATaGCACGAAAGGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REGWCLPSLVLLAFYPQARHPWQ*HERSRR Trigger: CCTCCTGCTCCTTTCGTGCCATTGCCAGGGGTGCCT...GGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCGCACATGGCCAATGGTaGTGCCAGGTGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGTSRAADHLKFWSRRWVAHGQW*CQVEPG Trigger: TCCAGGCTCCACCTGGCACCACCATTGGCCATGTGC...GACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CCACAGGAGAAGCAGGGAAGGGATGGGACACAACGGCTCCCAACCACTCGGCCATCTTCACCTCAAAGTTaGTGTCTGTACCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQEKQGRDGTQRLPTTRPSSPQS*CLYHSH Trigger: GTGGCTGTGGTACAGACACCAACTTTGAGGTGAAGA...TGGCCGAGTGGTTGGGAGCCGTTGTGTCCCATCCCTTCCCTGCTTCTCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR TCA 90 bp | GTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGGGGTACTCTCTTCAGCTGCCTaGCCCAGTTGCTGTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVSAIFGTACLLPTSPGVLSSAA*PSCCPV Trigger: AACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAG...TACCCCAGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTGGACTTCCATCTCCTaGAGACCACAGGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGTSRAADHLKFWSRRWVWTSIS*RPQGQQ Trigger: CTGCTGCCCCTGTGGTCTTCAGGAGATGGAAGTCCA...GACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR GCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTTGTCCCGGTCCAGGATaGAGAGCCACCGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGCPGPG*RATGSG Trigger: TCCAGAGCCGGTGGCTCTGCATCCTGGACCGGGACA...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR GCA 90 bp | CTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATCCTGAGGTGGCTAGCAGCCCTCCCCACTaGTTGCTGATGCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTILNSGQGDGSPHPEVASSPPH*LLMRPT Trigger: TGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCTGCT...AGCCACCTCAGGATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGATGGCAGAGGGTCCTaGGCCTCCTCTCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRVVSAIFGTACLLPTSPDGRGS*ASSLLE Trigger: TTCGAGAAGAGAGGAGGCGCAGGACCCTCTGCCATC...AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTAAGGGGCATAGCCTTTaGGGGGCAAGTAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVVSAIFGTACLLPTSPKGHSL*GASSLP Trigger: TGGCAGGCTACTTGCCCCCCAAAGGCTATGCCCCTT...AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | ACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCACTCTGGATACCCAGATaGCACGGGGTAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRAADHLKFWSRRWVSSLWIPR*HGVGRW Trigger: CCACCTCCCTACCCCGTGCCATCTGGGTATCCAGAG...TGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTTGGAGCCACTGGGCCTaGCGAGGGGAAGAGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGWSHWA*RGEESE Trigger: TTCGCTCTCTTCCCCTCGCCAGGCCCAGTGGCTCCA...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATAGGCACCCCTGGCAATaGCACGAAAGGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGQLTILNSGQGDGSPHRHPWQ*HERSRR Trigger: CCTCCTGCTCCTTTCGTGCCATTGCCAGGGGTGCCT...ATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | AAGGGTTGCTTCAGGAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTGCACATGGCCAATGGTaGTGCCAGGTGGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGCFRRERPGQLTILNSGAHGQW*CQVEPG Trigger: TCCAGGCTCCACCTGGCACCACCATTGGCCATGTGC...ACCAGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTCCTGAAGCAACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCGTAGCACATGGCCAATaGTGGTGCCAGGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGTSRAADHLKFWSRRWVVAHGQ*WCQVEP Trigger: AGGCTCCACCTGGCACCACCATTGGCCATGTGCTAC...GACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGTAGCACATGGCCAATaGTGGTGCCAGGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVVSAIFGTACLLPTSPVAHGQ*WCQVEP Trigger: AGGCTCCACCTGGCACCACCATTGGCCATGTGCTAC...AGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGGCAAGATCGACTGGGAATTaGAGGCCAAAGTCATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGSWHWGPTATAISEEARSTGN*RPKSSA Trigger: TGCCGATGACTTTGGCCTCCAATTCCCAGTCGATCT...TGCCTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR TCA 90 bp | CGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATCTCTCTTCAGCTGCCTaGCCCAGTTGCTGTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQLTILNSGQGDGSPHLSSAA*PSCCPV Trigger: AACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAG...ATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR GCA 90 bp | TGTAGGTTGACACAAGGGCTAAACAAAGATTTGTCCTCCGCAGGTAGAGCTGAGTGTCCCGGTCCAGGATaGAGAGCCACCGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLTQGLNKDLSSAGRAECPGPG*RATGSG Trigger: TCCAGAGCCGGTGGCTCTGCATCCTGGACCGGGACA...CTCAGCTCTACCTGCGGAGGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | CCCAACTTAGATATTGACTTGGGAGCTGCTCTGGTTTGGTCCAGAATCACTATGGCAGGGGCAGGCACCTaGGTGGGCACTGGAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNLDIDLGAALVWSRITMAGAGT*VGTGAC Trigger: ACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGC...CATAGTGATTCTGGACCAAACCAGAGCAGCTCCCAAGTCAATATCTAAGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | AGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGTCTTCACCTCAAAGTTaGTGTCTGTACCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGSWHWGPTATAISEESSPQS*CLYHSH Trigger: GTGGCTGTGGTACAGACACCAACTTTGAGGTGAAGA...CTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGTCTGCCATCTTTGGTACTGCTTGCCTTTTACCCACAAGCCCTGGGGAGATCGACTGGGAATTaGAGGCCAAAGTCATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWCLPSLVLLAFYPQALGRSTGN*RPKSSA Trigger: TGCCGATGACTTTGGCCTCCAATTCCCAGTCGATCT...CCCCAGGGCTTGTGGGTAAAAGGCAAGCAGTACCAAAGATGGCAGACACCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTAAGGGGCATAGCCTTTaGGGGGCAAGTAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGKGHSL*GASSLP Trigger: TGGCAGGCTACTTGCCCCCCAAAGGCTATGCCCCTT...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GGAACTGTCATTAGCTACTTCCCTAAACTCTATGGGGCACCCAACTTAGATATTGGGCAGGCACCTGGGTaGGCACTGGAGCTTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTVISYFPKLYGAPNLDIGQAPG*ALELVP Trigger: CGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCC...AATATCTAAGTTGGGTGCCCCATAGAGTTTAGGGAAGTAGCTAATGACAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTGCTTCAGGAGGGAACGTCCAGGGCAGCTGACCATCTTAAATTCTGGTAATGGTGGTGCCAGGTaGAGCCTGGACTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGCFRRERPGQLTILNSGNGGAR*SLDFHL Trigger: GAGATGGAAGTCCAGGCTCCACCTGGCACCACCATT...ACCAGAATTTAAGATGGTCAGCTGCCCTGGACGTTCCCTCCTGAAGCAACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTAATGGTGGTGCCAGGTaGAGCCTGGACTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGNGGAR*SLDFHL Trigger: GAGATGGAAGTCCAGGCTCCACCTGGCACCACCATT...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | TATGAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGAAGGGGCATAGCCTTTaGGGGGCAAGTAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YEYNIQRHSLLPTVGEGRKGHSL*GASSLP Trigger: TGGCAGGCTACTTGCCCCCCAAAGGCTATGCCCCTT...CCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTTGACACAAGGGCTAAACAAAGATTTGTCCTCCGCAGGTAGAGCTGAGAATGGTGGTGCCAGGTaGAGCCTGGACTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRLTQGLNKDLSSAGRAENGGAR*SLDFHL Trigger: GAGATGGAAGTCCAGGCTCCACCTGGCACCACCATT...CTCAGCTCTACCTGCGGAGGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CAA 72 bp | AGTGTAGATTATACAGGCTGGCTGACGCCGCTCCCTTaGTGTTATCCGGTATCTACCCTCTCCCATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SVDYTGWLTPLP*CYPVSTLSHHI Trigger: GATGTGATGGGAGAGGGTAGATACCGGATAACACAAAGGGAGCGGCGTCAGCCAGCCTGTATAATCTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| 3UTR CAA 72 bp | AGGGCCTGTAGGTTGACACAAGGGCTAAACAAAGATTaGTCCTCCGCAGGTAGAGCTGAGTGTGCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RACRLTQGLNKD*SSAGRAECAWC Trigger: ACACCATGCACACTCAGCTCTACCTGCGGAGGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACAGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
||
| CDS-3UTR GCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTTTAGGAAGGAAGGGATaGCAGGTCTGTAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGLGRKG*QVCSTW Trigger: CCATGTGCTACAGACCTGGCATCCCTTCCTTCCTAA...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CTTTATGTTCAAAGGGCCTGTAGGTTGACACAAGGGCTAAACAAAGATTTGTCCAGGCACCCCTGGCAATaGCACGAAAGGAGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LYVQRACRLTQGLNKDLSRHPWQ*HERSRR Trigger: CCTCCTGCTCCTTTCGTGCCATTGCCAGGGGTGCCT...GGACAAATCTTTGTTTAGCCCTTGTGTCAACCTACAGGCCCTTTGAACATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | CGTCCAGGGCAGCTGACCATCTTAAATTCTGGTCAAGGAGATGGGTCTCCTCATTCTTCACCTCAAAGTTaGTGTCTGTACCACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RPGQLTILNSGQGDGSPHSSPQS*CLYHSH Trigger: GTGGCTGTGGTACAGACACCAACTTTGAGGTGAAGA...ATGAGGAGACCCATCTCCTTGACCAGAATTTAAGATGGTCAGCTGCCCTGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CCA 90 bp | GAGTACAACATACAAAGACACAGCCTCCTTCCTACAGTAGGGGAAGGAAGGGGTAGATCGACTGGGAATTaGAGGCCAAAGTCATCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EYNIQRHSLLPTVGEGRGRSTGN*RPKSSA Trigger: TGCCGATGACTTTGGCCTCCAATTCCCAGTCGATCT...ACCCCTTCCTTCCCCTACTGTAGGAAGGAGGCTGTGTCTTTGTATGTTGTACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| 3UTR CAA 72 bp | CCTAAACTCTATGGGGCACCCAACTTAGATATTGACTaGGGAGCTGCTCTGGTTTGGTCCAGAATCACTATG | + |
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Preference number: 4 (lower is better) Translates to: PKLYGAPNLDID*GAALVWSRITM Trigger: CATAGTGATTCTGGACCAAACCAGAGCAGCTCCCAAGTCAATATCTAAGTTGGGTGCCCCATAGAGTTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| 3UTR CAA 72 bp | TCCACTCTGCCTACTATATTCCCAATTGAACAGGACTaGAAAGAAAAAGCTTTGGAGGAGGCCTCTACTCAC | + |
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Preference number: 4 (lower is better) Translates to: STLPTIFPIEQD*KEKALEEASTH Trigger: GTGAGTAGAGGCCTCCTCCAAAGCTTTTTCTTTCAAGTCCTGTTCAATTGGGAATATAGTAGGCAGAGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| CDS CCA 90 bp | GCGAGGGGAAGAGAGCGAAGCCGGGAGCAGGGGCAGGCACCTGGGTaGGCACTGGAGCTTGTCCCGGTCCAGGATGCAGAGCCACCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ARGRERSREQGQAPG*ALELVPVQDAEPPA Trigger: AGCCGGTGGCTCTGCATCCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGCTCCCGGCTTCGCTCTCTTCCCCTCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 90 bp | CCTGGCGAGGGGAAGAGAGCGAAGCCGGGAGCAGGGGCAGGCACCTaGGTGGGCACTGGAGCTTGTCCCGGTCCAGGATGCAGAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PGEGKRAKPGAGAGT*VGTGACPGPGCRAT Trigger: GGTGGCTCTGCATCCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGCTCCCGGCTTCGCTCTCTTCCCCTCGCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS GCA 90 bp | GTGGAGCCTGGACTTCCATCTCCTGAAGACCACAGGGGCAGCAGCTaGAGCCACAATGAAGTGGGCGGAGGAGCCGGAGCACCTCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: VEPGLPSPEDHRGSS*SHNEVGGGAGAPRG Trigger: ACCGCGAGGTGCTCCGGCTCCTCCGCCCACTTCATTGTGGCTGCAGCTGCTGCCCCTGTGGTCTTCAGGAGATGGAAGTCCAGGCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS GCA 90 bp | TTCGAAATGGTCGGCGGGCACCACAGCACAGGCGGGCACAACAGTTaGTCTCTTCAGCTGCCTGACCCAGTTGCTGTCCGGTTCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: FEMVGGHHSTGGHNS*SLQLPDPVAVRFRS Trigger: GCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGCTGTGGTGCCCGCCGACCATTTCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTTAGGGAGTTGGCACTGGGGCCCAACCGCTACAGCTATTAGTGAGGAGAGCCCTCCCCACTGCTaGCTGATGCGGCCCACACTT | + |
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Preference number: 5 (lower is better) Translates to: RGLGSWHWGPTATAISEESPPHC*LMRPTL Trigger: AAGTGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCT...CTCCTCACTAATAGCTGTAGCGGTTGGGCCCCAGTGCCAACTCCCTAAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS GCA 90 bp | GCGGGCACCACAGCACAGGCGGGCACAACAGTTGCTCTCTTCAGCTaGCTGACCCAGTTGCTGTCCGGTTCCGGAGCGAAGTTCATACAT | + |
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Preference number: 5 (lower is better) Translates to: AGTTAQAGTTVALFS*LTQLLSGSGAKFIH Trigger: ATGTATGAACTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGCTGTGGTGCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS-3UTR CAA 90 bp | GCACAGGAAGCTGCAGAAAGCACCCGCAGGGCCCAGGGGCTTAGGGAGTTGGCAGTCTTCACCTCAAAGTaGGTGTCTGTACCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: AQEAAESTRRAQGLRELAVFTSK*VSVPQP Trigger: TGGCTGTGGTACAGACACCAACTTTGAGGTGAAGAC...TGCCAACTCCCTAAGCCCCTGGGCCCTGCGGGTGCTTTCTGCAGCTTCCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS-3UTR CAA 90 bp | ACTAGTGGTCAGCTGTCCTACCTCCTGCTCACACAGGTAGACCAGCTCTTCCACAGCCCTCCCCACTGCTaGCTGATGCGGCCCACACTT | + |
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Preference number: 5 (lower is better) Translates to: TSGQLSYLLLTQVDQLFHSPPHC*LMRPTL Trigger: AAGTGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCT...GTGGAAGAGCTGGTCTACCTGTGTGAGCAGGAGGTAGGACAGCTGACCACTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108633.9 |
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| CDS-3UTR CAA 90 bp | AGTCCAGGATTCCAGATGCCCCTGCCTATGCAGAGGCCCCAGAGGAAGGCTGGAGTCTTCACCTCAAAGTaGGTGTCTGTACCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SPGFQMPLPMQRPQRKAGVFTSK*VSVPQP Trigger: TGGCTGTGGTACAGACACCAACTTTGAGGTGAAGAC...TCCAGCCTTCCTCTGGGGCCTCTGCATAGGCAGGGGCATCTGGAATCCTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS TCA 90 bp | GCACCACAGCACAGGCGGGCACAACAGTTGCTCTCTTCAGCTGCCTaGCCCAGTTGCTGTCCGGTTCCGGAGCGAAGTTCATACATATTA | + |
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Preference number: 5 (lower is better) Translates to: APQHRRAQQLLSSAA*PSCCPVPERSSYIL Trigger: TAATATGTATGAACTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGCTGTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 90 bp | CCCAGCAGTACGGCCTTCACTTTCACATCTAGATCGACTGGGAATTaGAGGCCAAAGTCATCGGCATCTGTGAGGGCTTCTCGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSSTAFTFTSRSTGN*RPKSSASVRASRSS Trigger: GCTGCTCCGAGAAGCCCTCACAGATGCCGATGACTTTGGCCTCCAATTCCCAGTCGATCTAGATGTGAAAGTGAAGGCCGTACTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS TCA 90 bp | CAGAGGGTCCTGCGCCTCCTCTCTTCTCGAAGAACATATAATCGATaGGGAACGTGGCTCCCAGCAGTACGGCCTTCACTTTCACATCTA | + |
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Preference number: 5 (lower is better) Translates to: QRVLRLLSSRRTYNR*GTWLPAVRPSLSHL Trigger: TAGATGTGAAAGTGAAGGCCGTACTGCTGGGAGCCACGTTCCTCATCGATTATATGTTCTTCGAGAAGAGAGGAGGCGCAGGACCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS CAA 72 bp | GGGAGCAGGGGCAGGCACCTGGGTGGGCACTGGAGCTaGTCCCGGTCCAGGATGCAGAGCCACCGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSRGRHLGGHWS*SRSRMQSHRLW Trigger: CCAGAGCCGGTGGCTCTGCATCCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 72 bp | GGGAAGAGAGCGAAGCCGGGAGCAGGGGCAGGCACCTaGGTGGGCACTGGAGCTTGTCCCGGTCCAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GKRAKPGAGAGT*VGTGACPGPGC Trigger: GCATCCTGGACCGGGACAAGCTCCAGTGCCCACCCAGGTGCCTGCCCCTGCTCCCGGCTTCGCTCTCTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS GCA 72 bp | GTCGGCGGGCACCACAGCACAGGCGGGCACAACAGTTaGTCTCTTCAGCTGCCTGACCCAGTTGCTGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: VGGHHSTGGHNS*SLQLPDPVAVR Trigger: CCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGCTGTGGTGCCCGCCGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS GCA 72 bp | ACAGCACAGGCGGGCACAACAGTTGCTCTCTTCAGCTaGCTGACCCAGTTGCTGTCCGGTTCCGGAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: TAQAGTTVALFS*LTQLLSGSGAK Trigger: CTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS TCA 72 bp | CACAGGCGGGCACAACAGTTGCTCTCTTCAGCTGCCTaGCCCAGTTGCTGTCCGGTTCCGGAGCGAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HRRAQQLLSSAA*PSCCPVPERSS Trigger: TGAACTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CAA 90 bp | TCATCGGCATCTGTGAGGGCTTCTCGGAGCAGCCCTCCCCACTGCTaGCTGATGCGGCCCACACTTCGCGATTCATCCTTAGTCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: SSASVRASRSSPPHC*LMRPTLRDSSLVFT Trigger: GGTGAAGACTAAGGATGAATCGCGAAGTGTGGGCCGCATCAGCAAGCAGTGGGGAGGGCTGCTCCGAGAAGCCCTCACAGATGCCGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS CCA 72 bp | GGAAGGGATGCCAGGTCTGTAGCACATGGCCAATGGTaGTGCCAGGTGGAGCCTGGACTTCCATCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GRDARSVAHGQW*CQVEPGLPSPE Trigger: TTCAGGAGATGGAAGTCCAGGCTCCACCTGGCACCACCATTGGCCATGTGCTACAGACCTGGCATCCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 72 bp | GAAGGAAGGGATGCCAGGTCTGTAGCACATGGCCAATaGTGGTGCCAGGTGGAGCCTGGACTTCCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: EGRDARSVAHGQ*WCQVEPGLPSP Trigger: AGGAGATGGAAGTCCAGGCTCCACCTGGCACCACCATTGGCCATGTGCTACAGACCTGGCATCCCTTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 72 bp | AACTTAGGAAGGAAGGGATGCCAGGTCTGTAGCACATaGCCAATGGTGGTGCCAGGTGGAGCCTGGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: NLGRKGCQVCST*PMVVPGGAWTS Trigger: GGAAGTCCAGGCTCCACCTGGCACCACCATTGGCCATGTGCTACAGACCTGGCATCCCTTCCTTCCTAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CAA 90 bp | GCACAGGCGGGCACAACAGTTGCTCTCTTCAGCTGCCTGACCCAGTaGCTGTCCGGTTCCGGAGCGAAGTTCATACATATTACAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQAGTTVALFSCLTQ*LSGSGAKFIHITGL Trigger: GAGACCTGTAATATGTATGAACTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCCCGCCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS TCA 72 bp | CTGCGCCTCCTCTCTTCTCGAAGAACATATAATCGATaGGGAACGTGGCTCCCAGCAGTACGGCCTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LRLLSSRRTYNR*GTWLPAVRPSL Trigger: AAGTGAAGGCCGTACTGCTGGGAGCCACGTTCCTCATCGATTATATGTTCTTCGAGAAGAGAGGAGGCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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| CDS CAA 72 bp | GGCACAACAGTTGCTCTCTTCAGCTGCCTGACCCAGTaGCTGTCCGGTTCCGGAGCGAAGTTCATACATATT | + |
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Preference number: 6 (lower is better) Translates to: GTTVALFSCLTQ*LSGSGAKFIHI Trigger: AATATGTATGAACTTCGCTCCGGAACCGGACAGCAACTGGGTCAGGCAGCTGAAGAGAGCAACTGTTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 ENSMUST00000152566.8 |
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| CDS CCA 72 bp | ACGGCCTTCACTTTCACATCTAGATCGACTGGGAATTaGAGGCCAAAGTCATCGGCATCTGTGAGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TAFTFTSRSTGN*RPKSSASVRAS Trigger: AGAAGCCCTCACAGATGCCGATGACTTTGGCCTCCAATTCCCAGTCGATCTAGATGTGAAAGTGAAGGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019605.4 ENSMUST00000108632.8 ENSMUST00000108633.9 |
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