Pregenerated sensors for PLRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027998Ensembl transcript IDs: ENSMUST00000029628.11, ENSMUST00000122128.2, ENSMUST00000150268.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACACAAGCACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTaGATTGTGACCAGAGAGATTTTGAATGAAGCCTCCATCGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: RHKHSISIDRQRVND*IVTREILNEASIGE Trigger: TTCCCCGATGGAGGCTTCATTCAAAATCTCTCTGGTCACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTGCTTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACTGTCCAAAGACCAGTCCCAAAGGTGCATaGTGCCATTGTCAGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLTDRKHKQIFLTHCPKTSPKGA*CHCQLQ Trigger: CTGGAGCTGACAATGGCACCATGCACCTTTGGGACT...GGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTAACCGACTTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACAGAGAGATTTTGAATaGAGCCTCCATCGGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: VSNRLSDRSKAQANIPDSQRDFE*SLHRGI Trigger: AATTCCCCGATGGAGGCTTCATTCAAAATCTCTCTG...TGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAAGTCGGTTACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGACAAGCAAATATTCCTaGCTCACTGTCCAAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: CFLQVSFHERPDILINTKTSKYS*LTVQRP Trigger: GGGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGT...CTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR GCA 72 bp | AATTATAGCCAGTTCTCCAGTCCCAAAGGTGCATGGTaGCATTGTCAGCTCCAGACACAAGCACTCCATCAG | + |
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Preference number: 3 (lower is better) Translates to: NYSQFSSPKGAW*HCQLQTQALHQ Trigger: CTGATGGAGTGCTTGTGTCTGGAGCTGACAATGGCACCATGCACCTTTGGGACTGGAGAACTGGCTATAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR CCA 72 bp | GAAAATTATAGCCAGTTCTCCAGTCCCAAAGGTGCATaGTGCCATTGTCAGCTCCAGACACAAGCACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: ENYSQFSSPKGA*CHCQLQTQALH Trigger: ATGGAGTGCTTGTGTCTGGAGCTGACAATGGCACCATGCACCTTTGGGACTGGAGAACTGGCTATAATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR GCA 72 bp | CACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTaGATTGTGACCAGAGAGATTTTGAATGAAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HSISIDRQRVND*IVTREILNEAS Trigger: GGAGGCTTCATTCAAAATCTCTCTGGTCACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR CCA 72 bp | TCGCTTTCTCTTGATAATTTCTGGTTTCCAGCTGACTaGGTGAGTTTCTTCTGTCGCAGTCTCATCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SLSLDNFWFPAD*VSFFCRSLILS Trigger: AGAGAGGATGAGACTGCGACAGAAGAAACTCACCCAGTCAGCTGGAAACCAGAAATTATCAAGAGAAAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| 3UTR TCA 72 bp | TACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATaGAAGACCGGATATCCTCATCAACACCAAGCACGA | + |
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Preference number: 3 (lower is better) Translates to: YKAAMFSASELS*KTGYPHQHQAR Trigger: TCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACCACGGTGGGTGCCACTaGGGTTTGGGCATCGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDHGGCH*GLGIVG Trigger: CCCTACGATGCCCAAACCCCAGTGGCACCCACCGTG...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | CACTGTCCAAAGACCCAGGCTGTACAGCTGCATGGACGCGCTGAAAATTATAGCAGTTTCCACGGTGGGTaGCACTGGGGTTTGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: HCPKTQAVQLHGRAENYSSFHGG*HWGLGI Trigger: GATGCCCAAACCCCAGTGGCACCCACCGTGGAAACT...GCTATAATTTTCAGCGCGTCCATGCAGCTGTACAGCCTGGGTCTTTGGACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR TCA 90 bp | CCAGTCCCAAAGGTGCATGGTGCCATTGTCAGCTCCAGACACAAGCACTCCATCGACCACAGCCCTCACTaGTTTCTTATGGTTCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PVPKVHGAIVSSRHKHSIDHSPH*FLMVRQ Trigger: CTGACGAACCATAAGAAATCAGTGAGGGCTGTGGTC...GATGGAGTGCTTGTGTCTGGAGCTGACAATGGCACCATGCACCTTTGGGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CCA 90 bp | CTCACTGTCCAAAGACCCAGGCTGTACAGCTGCATGGACGCGCTGAAAATTATAGCATCAACTCTGGTCTaGGACGGTAACGCCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: LTVQRPRLYSCMDALKIIASTLV*DGNATA Trigger: CGCTGTGGCGTTACCGTCCCAGACCAGAGTTGATGC...TATAATTTTCAGCGCGTCCATGCAGCTGTACAGCCTGGGTCTTTGGACAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CCA 90 bp | CTGTACAGCTGCATGGACGCGCTGAAAATTATAGCCAGTTCTCCAGTCCCAAAGTTCATTGCTGTGGGCTaGGAACGGTCAGAAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LYSCMDALKIIASSPVPKFIAVG*ERSEAP Trigger: AGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAA...CTTTGGGACTGGAGAACTGGCTATAATTTTCAGCGCGTCCATGCAGCTGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | CAGTCCCAAAGGTGCATGGTGCCATTGTCAGCTCCAGACACAAGCACTCCATCACTGGGTATGGATGGGTaGCTGTCACCAAATACTCAA | + |
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Preference number: 4 (lower is better) Translates to: QSQRCMVPLSAPDTSTPSLGMDG*LSPNTQ Trigger: TTGAGTATTTGGTGACAGGCACCCATCCATACCCAG...TGATGGAGTGCTTGTGTCTGGAGCTGACAATGGCACCATGCACCTTTGGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCGGCAACACCGGGTCCTaGTGGGTATGGATGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILGNTGS*WVWMGA Trigger: GGCACCCATCCATACCCAGCAGGACCCGGTGTTGCC...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACAATGATCTGTGGCTCTaGAGCCTGGCATCTCACGGT | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDNDLWL*SLASHG Trigger: ACCGTGAGATGCCAGGCTGCAGAGCCACAGATCATT...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | TTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGTAGAGTTTCCACGGTaGGTGCCACTGGGGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FHERPDILINTKHEQDSHVEFPR*VPLGFG Trigger: CCCAAACCCCAGTGGCACCCACCGTGGAAACTCTAC...ATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACAGTCCCAAAGGTGCATaGTGCCATTGTCAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDSPKGA*CHCQLQ Trigger: CTGGAGCTGACAATGGCACCATGCACCTTTGGGACT...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | CAGTCCCAAAGGTGCATGGTGCCATTGTCAGCTCCAGACACAAGCACTCCATCATCTCACGGTAGCAACTaGATTTGTGTGTCCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QSQRCMVPLSAPDTSTPSSHGSN*ICVSRQ Trigger: TTGTCTGGACACACAAATGCAGTTGCTACCGTGAGA...TGATGGAGTGCTTGTGTCTGGAGCTGACAATGGCACCATGCACCTTTGGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | ATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGCTCCAGTCCCAAAGGTaGATGGTGCCATTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKDRISSSTPSTNRTAMKLQSQR*MVPLSA Trigger: AGCTGACAATGGCACCATGCACCTTTGGGACTGGAG...CTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACTGTCCAAAGACCACGGTCAGAAGCCCCTaGGTGTCGGTACTCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: FLTDRKHKQIFLTHCPKTTVRSP*VSVLTS Trigger: GGAAGTGAGTACCGACACCCAGGGGCTTCTGACCGT...GGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACCCCAGATCCGAGCAGTaGAATCTCGACTACAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDPRSEQ*NLDYKS Trigger: TGACTTGTAGTCGAGATTCCACTGCTCGGATCTGGG...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGTCCAAAGACCCAGGCTGTACAGCTGCATGGACGCGCTGAAAATTATATCCTGTAATGATCTGTaGCTCTGCAGCCTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LTVQRPRLYSCMDALKIISCNDL*LCSLAS Trigger: AGATGCCAGGCTGCAGAGCCACAGATCATTACAGGA...TATAATTTTCAGCGCGTCCATGCAGCTGTACAGCCTGGGTCTTTGGACAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACAGTGTGTGTACAGAATaGTTCTGTACCTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDSVCTE*FCTSST Trigger: GGTGGAGGAGGTACAGAAGCATTCTGTACACACACT...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | AATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGCAGCGGCAACACCGGGTCCTaGTGGGTATGGATGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: NKTQVRDMGAVYCKIQSSGNTGS*WVWMGA Trigger: GGCACCCATCCATACCCAGCAGGACCCGGTGTTGCC...GCTGCTTTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCAGTTTCCACGGTGGGTaGCACTGGGGTTTGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILSFHGG*HWGLGI Trigger: GATGCCCAAACCCCAGTGGCACCCACCGTGGAAACT...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | TTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATAATGATCTGTGGCTCTaGAGCCTGGCATCTCACGGT | + |
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Preference number: 4 (lower is better) Translates to: FHERPDILINTKHEQDSHNDLWL*SLASHG Trigger: ACCGTGAGATGCCAGGCTGCAGAGCCACAGATCATT...ATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | TTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATCCCAAAGGTGCATGGTaGCATTGTCAGCTCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: FHERPDILINTKHEQDSHPKGAW*HCQLQT Trigger: TGTCTGGAGCTGACAATGGCACCATGCACCTTTGGG...ATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCACGGTCAGAAGCCCCTaGGTGTCGGTACTCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILITVRSP*VSVLTS Trigger: GGAAGTGAGTACCGACACCCAGGGGCTTCTGACCGT...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | AATACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCACGGTGGGTGCCACTaGGGTTTGGGCATCGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTKQQCFLQVSFHERPDIHGGCH*GLGIVG Trigger: CCCTACGATGCCCAAACCCCAGTGGCACCCACCGTG...GATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GTTAGTAACCGACTTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCAGTAGAGTTTCCACGGTaGGTGCCACTGGGGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VSNRLSDRSKAQANIPDSVEFPR*VPLGFG Trigger: CCCAAACCCCAGTGGCACCCACCGTGGAAACTCTAC...TGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAAGTCGGTTACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CCA 90 bp | AAAATTATAGCCAGTTCTCCAGTCCCAAAGGTGCATGGTGCCATTGTCAGCTCCCCCAGATCCGAGCAGTaGAATCTCGACTACAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KIIASSPVPKVHGAIVSSPRSEQ*NLDYKS Trigger: TGACTTGTAGTCGAGATTCCACTGCTCGGATCTGGG...GGAGCTGACAATGGCACCATGCACCTTTGGGACTGGAGAACTGGCTATAATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR TCA 90 bp | ATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGTCCTCTTCAATGACCTaGACACCAGTGTGTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: MKDRISSSTPSTNRTAMKSSSMT*TPVCVQ Trigger: CTGTACACACACTGGTGTTCAGGTCATTGAAGAGGA...CTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR TCA 90 bp | ATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGCTGCTTATGAGGATATaGGTCTGTTGCGTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: MKDRISSSTPSTNRTAMKLLMRI*VCCVLR Trigger: CCTCAGAACGCAACAGACTCATATCCTCATAAGCAG...CTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR TCA 90 bp | GTTAGTAACCGACTTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCAGAGGGACTGTGCAGCTaGCTCACTTGGCATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSNRLSDRSKAQANIPDSEGLCS*LTWHSL Trigger: CAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTC...TGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAAGTCGGTTACTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCCACCACGCACTGTACTaGTGTGGCCAGTCAACGACA | + |
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Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILIHHALY*CGQSTT Trigger: TGTCGTTGACTGGCCACATCAGTACAGTGCGTGGTG...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACCTGGGTATGGATGGGTaGCTGTCACCAAATACTCAA | + |
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Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDLGMDG*LSPNTQ Trigger: TTGAGTATTTGGTGACAGGCACCCATCCATACCCAG...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACGCCACAAACATGTCATaGGTCCTCTTCAATGACCTG | + |
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Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDATNMS*VLFNDL Trigger: CAGGTCATTGAAGAGGACCCATGACATGTTTGTGGC...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACCAGGACATCCAATGTTaGGTGCAAATCCAGACCATA | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDQDIQC*VQIQTI Trigger: TATGGTCTGGATTTGCACCCAACATTGGATGTCCTG...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR TCA 90 bp | CACAAGCACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTGCATTGTGACCCGTATTGTGGTATCGTaGCTTCCTGTAATGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: HKHSISIDRQRVNDCIVTRIVVS*LPVMIC Trigger: ACAGATCATTACAGGAAGTCACGATACCACAATACG...GGTCACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTGCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACATTGCGAAGCTTGATTaGCATTTTCCGCTTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDIAKLD*HFPLVT Trigger: AGTCACAAGCGGAAAATGGCAATCAAGCTTCGCAAT...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | AGACACAAGCACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTGCATTGTGCATAATAGAATTCATTaGTGTGGGCTGGGAACGGTC | + |
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Preference number: 4 (lower is better) Translates to: RHKHSISIDRQRVNDCIVHNRIH*CGLGTV Trigger: GACCGTTCCCAGCCCACAGCAATGAATTCTATTATG...CACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTGCTTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR GCA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACACATCCAATGTTGGGTaGAAATCCAGACCATACACT | + |
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Preference number: 4 (lower is better) Translates to: ERPDILINTKHEQDSHEDTSNVG*KSRPYT Trigger: AGTGTATGGTCTGGATTTGCACCCAACATTGGATGT...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR GCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACTCTCACGGTAGCAACTaGATTTGTGTGTCCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDSHGSN*ICVSRQ Trigger: TTGTCTGGACACACAAATGCAGTTGCTACCGTGAGA...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CCA 90 bp | GACTTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACTGTCCAAAGGATTTGCATCAACTCTaGTCTGGGACGGTAACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFLTDRKHKQIFLTHCPKDLHQL*SGTVTP Trigger: TGGCGTTACCGTCCCAGACCAGAGTTGATGCAAATC...CTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGGCCATTTTCCGCTTGTaGCTCTCTTCATCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLQVSFHERPDILINTKAIFRL*LSSSKG Trigger: GCCTTTGGATGAAGAGAGTCACAAGCGGAAAATGGC...CTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGCTTAAGGTTCTCTTTTaGAGTAGGCATATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MKDRISSSTPSTNRTAMKLKVLF*SRHMQH Trigger: GTGCTGCATATGCCTACTTCAAAAGAGAACCTTAAG...CTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGCAGCGAGGGACTGTGCAGCTaGCTCACTTGGCATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTQVRDMGAVYCKIQSSEGLCS*LTWHSL Trigger: CAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTC...GCTGCTTTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCGACCACAGCCCTCACTaGTTTCTTATGGTTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILDHSPH*FLMVRQ Trigger: CTGACGAACCATAAGAAATCAGTGAGGGCTGTGGTC...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | AGACACAAGCACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTGCATTGTGTTTGAAGTAGGCATATaGAGCACAGGACCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHKHSISIDRQRVNDCIVFEVGI*STGPYS Trigger: TGAGTATGGTCCTGTGCTGCATATGCCTACTTCAAA...CACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTGCTTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR GCA 90 bp | AAAATTATAGCCAGTTCTCCAGTCCCAAAGGTGCATGGTGCCATTGTCAGCTCCACATCCAATGTTGGGTaGAAATCCAGACCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: KIIASSPVPKVHGAIVSSTSNVG*KSRPYT Trigger: AGTGTATGGTCTGGATTTGCACCCAACATTGGATGT...GGAGCTGACAATGGCACCATGCACCTTTGGGACTGGAGAACTGGCTATAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDSLGIL*ILVSAV Trigger: GACTGCTGATACTAAGATCCAGAGAATGCCAAGTGA...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCGATTTGCATCAACTCTaGTCTGGGACGGTAACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILDLHQL*SGTVTP Trigger: TGGCGTTACCGTCCCAGACCAGAGTTGATGCAAATC...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGCAGCTTCATTGCTGTGGGCTaGGAACGGTCAGAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTQVRDMGAVYCKIQSSFIAVG*ERSEAP Trigger: AGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAA...GCTGCTTTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCTCCTGTAATGATCTGTaGCTCTGCAGCCTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILISCNDL*LCSLAS Trigger: AGATGCCAGGCTGCAGAGCCACAGATCATTACAGGA...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGTCCTCTTCAATGACCTaGACACCAGTGTGTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLQVSFHERPDILINTKSSSMT*TPVCVQ Trigger: CTGTACACACACTGGTGTTCAGGTCATTGAAGAGGA...CTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCCTGCTTATGAGGATATaGGTCTGTTGCGTTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILLLMRI*VCCVLR Trigger: CCTCAGAACGCAACAGACTCATATCCTCATAAGCAG...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGAGTGTGTGTACAGAATaGTTCTGTACCTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CFLQVSFHERPDILINTKSVCTE*FCTSST Trigger: GGTGGAGGAGGTACAGAAGCATTCTGTACACACACT...CTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACCAGCGTGTTAATGATTaGATTGTGACCAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDQRVND*IVTREI Trigger: AATCTCTCTGGTCACAATGCAATCATTAACACGCTG...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCGCCACAAACATGTCATaGGTCCTCTTCAATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKQQCFLQVSFHERPDILATNMS*VLFNDL Trigger: CAGGTCATTGAAGAGGACCCATGACATGTTTGTGGC...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACTGTCCAAAGACCCAGGACATCCAATGTTaGGTGCAAATCCAGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: FLTDRKHKQIFLTHCPKTQDIQC*VQIQTI Trigger: TATGGTCTGGATTTGCACCCAACATTGGATGTCCTG...GGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACCTGCTTTATGTTATCTaGAGAACCAGACGCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFHERPDILINTKHEQDLLYVI*RTRRKC Trigger: ACATTTGCGTCTGGTTCTCCAGATAACATAAAGCAG...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATTCTCTTGATAATTTCTaGTTTCCAGCTGACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHERPDILINTKHEQDSHSLDNF*FPADWV Trigger: CACCCAGTCAGCTGGAAACCAGAAATTATCAAGAGA...ATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| 3UTR CAA 72 bp | CAGCGTGTTAATGATTGCATTGTGACCAGAGAGATTTaGAATGAAGCCTCCATCGGGGAATTTCCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRVNDCIVTREI*NEASIGEFPLL Trigger: AAGCAGTGGAAATTCCCCGATGGAGGCTTCATTCAAAATCTCTCTGGTCACAATGCAATCATTAACACGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR TCA 90 bp | AATACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCATGGGTCCTCTTCAATaGCCTGAACACCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTKQQCFLQVSFHERPDIMGPLQ*PEHQCV Trigger: CACACACTGGTGTTCAGGTCATTGAAGAGGACCCAT...GATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAAATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAACACCACGCACTGTACTaGTGTGGCCAGTCAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: FRNKTQVRDMGAVYCKIQHHALY*CGQSTT Trigger: TGTCGTTGACTGGCCACATCAGTACAGTGCGTGGTG...TTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATTTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGACCGATCGAAAGCACAAGCAAATATTCCTGACTCACTGTCCAAAGACAGTCCCAAATCTTTATaGTTCTGTCAGCAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSDRSKAQANIPDSLSKDSPKSL*FCQQIL Trigger: CAGGATCTGCTGACAGAACCATAAAGATTTGGGACT...GTCTTTGGACAGTGAGTCAGGAATATTTGCTTGTGCTTTCGATCGGTCAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCCTTAAGGTTCTCTTTTaGAGTAGGCATATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILILKVLF*SRHMQH Trigger: GTGCTGCATATGCCTACTTCAAAAGAGAACCTTAAG...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCCGTATTGTGGTATCGTaGCTTCCTGTAATGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILIRIVVS*LPVMIC Trigger: ACAGATCATTACAGGAAGTCACGATACCACAATACG...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAAATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAATTCCAGCTGACTGGGTaGGTTTCTTCTGTCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRNKTQVRDMGAVYCKIQFQLTG*VSSVAV Trigger: GACTGCGACAGAAGAAACTCACCCAGTCAGCTGGAA...TTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATTTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCATTGCGAAGCTTGATTaGCATTTTCCGCTTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILIIAKLD*HFPLVT Trigger: AGTCACAAGCGGAAAATGGCAATCAAGCTTCGCAAT...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILISLGIL*ILVSAV Trigger: GACTGCTGATACTAAGATCCAGAGAATGCCAAGTGA...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAGTCCCAAATCTTTATaGTTCTGTCAGCAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILISPKSL*FCQQIL Trigger: CAGGATCTGCTGACAGAACCATAAAGATTTGGGACT...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAAATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAATGGGTCCTCTTCAATaGCCTGAACACCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRNKTQVRDMGAVYCKIQMGPLQ*PEHQCV Trigger: CACACACTGGTGTTCAGGTCATTGAAGAGGACCCAT...TTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATTTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | AATACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCAGAGAGATTTTGAATaGAGCCTCCATCGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: NTKQQCFLQVSFHERPDIQRDFE*SLHRGI Trigger: AATTCCCCGATGGAGGCTTCATTCAAAATCTCTCTG...GATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGCAGCACAAGCAAATATTCCTaGCTCACTGTCCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NKTQVRDMGAVYCKIQSSTSKYS*LTVQRP Trigger: GGGTCTTTGGACAGTGAGTCAGGAATATTTGCTTGT...GCTGCTTTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGCAGCCATAATAGAATTCATTaGTGTGGGCTGGGAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTQVRDMGAVYCKIQSSHNRIH*CGLGTV Trigger: GACCGTTCCCAGCCCACAGCAATGAATTCTATTATG...GCTGCTTTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCTCGGGGAATTTCCACTaGTTTATGTTATCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQQCFLQVSFHERPDILISGNFH*FMLSGE Trigger: TTCTCCAGATAACATAAAGCAGTGGAAATTCCCCGA...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | AACGCCACAGCGAGGGACTGTGCAGCTGACTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTCAAGGCAACACCGGGTCCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NATARDCAADSLGIL*ILVSAVKATPGPAG Trigger: CCCAGCAGGACCCGGTGTTGCCTTGACTGCTGATACTAAGATCCAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTCGCTGTGGCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCATCAGCATTGACCGCCAGCGTGTTAATGATTGCATTGTGACCAGAGAGGGGTGCCACTGGGGTTaGGGCATCGTAGGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSISIDRQRVNDCIVTREGCHWG*GIVGAF Trigger: AAAAGCCCCTACGATGCCCAAACCCCAGTGGCACCC...CTCTCTGGTCACAATGCAATCATTAACACGCTGGCGGTCAATGCTGATGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
||
| CDS GCA 90 bp | TATCAGCAGTCAAGGCAACACCGGGTCCTGCTGGGTATGGATGGGTaGCTGTCACCAAATACTCAACATCTTGTCCTTGGTTGGCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YQQSRQHRVLLGMDG*LSPNTQHLVLGWRD Trigger: ATCCCGCCAACCAAGGACAAGATGTTGAGTATTTGGTGACAGGCACCCATCCATACCCAGCAGGACCCGGTGTTGCCTTGACTGCTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | CATAATAGAATTCATTGCTGTGGGCTGGGAACGGTCAGAAGCCCCTaGGTGTCGGTACTCACTTCCAGCAGGCCCAGTACGATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HNRIHCCGLGTVRSP*VSVLTSSRPSTICI Trigger: GATGCAAATCGTACTGGGCCTGCTGGAAGTGAGTACCGACACCCAGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAATTCTATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | TTAGTATCAGCAGTCAAGGCAACACCGGGTCCTGCTGGGTATGGATaGGTGCCTGTCACCAAATACTCAACATCTTGTCCTTGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVSAVKATPGPAGYG*VPVTKYSTSCPWLA Trigger: CGCCAACCAAGGACAAGATGTTGAGTATTTGGTGACAGGCACCCATCCATACCCAGCAGGACCCGGTGTTGCCTTGACTGCTGATACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | TTCTTAGTGTTGCCGGTCTCCATAATAGAATTCATTGCTGTGGGCTaGGAACGGTCAGAAGCCCCTGGGTGTCGGTACTCACTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLVLPVSIIEFIAVG*ERSEAPGCRYSLPA Trigger: TGCTGGAAGTGAGTACCGACACCCAGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAATTCTATTATGGAGACCGGCAACACTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | TCTCTGGATCTTAGTATCAGCAGTCAAGGCAACACCGGGTCCTGCTaGGTATGGATGGGTGCCTGTCACCAAATACTCAACATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLDLSISSQGNTGSC*VWMGACHQILNILS Trigger: GGACAAGATGTTGAGTATTTGGTGACAGGCACCCATCCATACCCAGCAGGACCCGGTGTTGCCTTGACTGCTGATACTAAGATCCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
||
| CDS CCA 90 bp | AACGCCACAGCGAGGGACTGTGCAGCTGACTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTCAAGGCAACACCTGTCACCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: NATARDCAADSLGIL*ILVSAVKATPVTKY Trigger: GTATTTGGTGACAGGTGTTGCCTTGACTGCTGATACTAAGATCCAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTCGCTGTGGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122128.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGAGCACTCCATCAGCATaGACCGCCAGCGTGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: MKDRISSSTPSTNRTAMKSTPSA*TASVLM Trigger: CATTAACACGCTGGCGGTCAATGCTGATGGAGTGCT...CTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
||
| CDS TCA 90 bp | TCCCAAATCTTTATGGTTCTGTCAGCAGATCCTGTAACGAACCACTaGTTTCCAGGTTCCACAGCGATACACCGAACCCAGCCAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SQIFMVLSADPVTNH*FPGSTAIHRTQPRC Trigger: GCATCTTGGCTGGGTTCGGTGTATCGCTGTGGAACCTGGAAATCAGTGGTTCGTTACAGGATCTGCTGACAGAACCATAAAGATTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACCCAGGACATCCAATGTaGGGTGCAAATCCAGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSFHERPDILINTKHEQDPGHPM*GANPDH Trigger: ATGGTCTGGATTTGCACCCAACATTGGATGTCCTGG...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS GCA 90 bp | TGTAATGATCTGTGGCTCTGCAGCCTGGCATCTCACGGTAGCAACTaGATTTGTGTGTCCAGACAAAGTGTGTACACTGGCTTTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CNDLWLCSLASHGSN*ICVSRQSVYTGFSS Trigger: AGAACTAAAGCCAGTGTACACACTTTGTCTGGACACACAAATGCAGTTGCTACCGTGAGATGCCAGGCTGCAGAGCCACAGATCATTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | CTGTACAGCTGCATGGACGCGCTGAAAATTATAGCCAGTTCTCCAGTCCCAAAGACAGGACCATACTCATaGCGAAGCTTGATTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LYSCMDALKIIASSPVPKTGPYS*RSLIAI Trigger: AATGGCAATCAAGCTTCGCAATGAGTATGGTCCTGT...CTTTGGGACTGGAGAACTGGCTATAATTTTCAGCGCGTCCATGCAGCTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CAA 90 bp | AATACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCGGGTGCCACTGGGGTTaGGGCATCGTAGGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTKQQCFLQVSFHERPDIGCHWG*GIVGAF Trigger: AAAAGCCCCTACGATGCCCAAACCCCAGTGGCACCC...GATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | CTGTACAGCTGCATGGACGCGCTGAAAATTATAGCCAGTTCTCCAGTCCCAAAGCAGCACTTCACTTGTTaGTCTTCTCCACAAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYSCMDALKIIASSPVPKQHFTC*SSPQEN Trigger: GTTCTCTTGTGGAGAAGACAAACAAGTGAAGTGCTG...CTTTGGGACTGGAGAACTGGCTATAATTTTCAGCGCGTCCATGCAGCTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS-3UTR CAA 90 bp | GAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATGAAGACGATCCCATAATCGTATaGTGGTATCGTGACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERPDILINTKHEQDSHEDDPIIV*WYRDFL Trigger: CAGGAAGTCACGATACCACAATACGATTATGGGATC...GTCTTCATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS TCA 90 bp | TTCCATTATCAGCCACAAACATGTCATGGGTCCTCTTCAATGACCTaGACACCAGTGTGTGTACAGAATGCTTCTGTACCTCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FHYQPQTCHGSSSMT*TPVCVQNASVPPPP Trigger: TGGTGGAGGAGGTACAGAAGCATTCTGTACACACACTGGTGTTCAGGTCATTGAAGAGGACCCATGACATGTTTGTGGCTGATAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS TCA 90 bp | GGGTTTTCCATTATCAGCCACAAACATGTCATGGGTCCTCTTCAATaGCCTGAACACCAGTGTGTGTACAGAATGCTTCTGTACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFSIISHKHVMGPLQ*PEHQCVYRMLLYLL Trigger: GAGGAGGTACAGAAGCATTCTGTACACACACTGGTGTTCAGGTCATTGAAGAGGACCCATGACATGTTTGTGGCTGATAATGGAAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 90 bp | TCATCCAAAGGCACGGGTTTTCCATTATCAGCCACAAACATGTCATaGGTCCTCTTCAATGACCTGAACACCAGTGTGTGTACAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKGTGFPLSATNMS*VLFNDLNTSVCTEC Trigger: GCATTCTGTACACACACTGGTGTTCAGGTCATTGAAGAGGACCCATGACATGTTTGTGGCTGATAATGGAAAACCCGTGCCTTTGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACACAGGACCATACTCATaGCGAAGCTTGATTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VSFHERPDILINTKHEQDTGPYS*RSLIAI Trigger: AATGGCAATCAAGCTTCGCAATGAGTATGGTCCTGT...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACGCAGAGTTCTTAGTGTaGCCGGTCTCCATAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSFHERPDILINTKHEQDAEFLV*PVSIIE Trigger: TTCTATTATGGAGACCGGCAACACTAAGAACTCTGC...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACCAGCACTTCACTTGTTaGTCTTCTCCACAAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSFHERPDILINTKHEQDQHFTC*SSPQEN Trigger: GTTCTCTTGTGGAGAAGACAAACAAGTGAAGTGCTG...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACGATCCCATAATCGTATaGTGGTATCGTGACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSFHERPDILINTKHEQDDPIIV*WYRDFL Trigger: CAGGAAGTCACGATACCACAATACGATTATGGGATC...GTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | TTTCATGAAAGACCGGATATCCTCATCAACACCAAGCACGAACAGGACAGCCATATCCCAGCACTTCACTaGTTTGTCTTCTCCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FHERPDILINTKHEQDSHIPALH*FVFSTR Trigger: TCTTGTGGAGAAGACAAACAAGTGAAGTGCTGGGAT...ATGGCTGTCCTGTTCGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | TGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCAACACCAAGTACTCATTGCGAAGCTaGATTGCCATTTTCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFLQVSFHERPDILINTKYSLRS*IAIFRL Trigger: CAAGCGGAAAATGGCAATCAAGCTTCGCAATGAGTA...CTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | AAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCATCTACTCATTGCGAAGCTaGATTGCCATTTTCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQQCFLQVSFHERPDILIYSLRS*IAIFRL Trigger: CAAGCGGAAAATGGCAATCAAGCTTCGCAATGAGTA...GATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCTCAACGACAGCTTTAATTaGCCACTAGCCAAGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TKQQCFLQVSFHERPDILNDSFN*PLAKSQ Trigger: TTGGGACTTGGCTAGTGGCAAATTAAAGCTGTCGTT...GAGGATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | AATACAAAGCAGCAATGTTTTCTGCAAGTGAGCTTTCATGAAAGACCGGATATCCCAGGACATCCAATGTaGGGTGCAAATCCAGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: NTKQQCFLQVSFHERPDIPGHPM*GANPDH Trigger: ATGGTCTGGATTTGCACCCAACATTGGATGTCCTGG...GATATCCGGTCTTTCATGAAAGCTCACTTGCAGAAAACATTGCTGCTTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | TTCAGAAATAAAACACAGGTGAGGGACATGGGAGCAGTTTATTGTAAAATACAAAGGTGCATGGTGCCATaGTCAGCTCCAGACACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRNKTQVRDMGAVYCKIQRCMVP*SAPDTS Trigger: GCTTGTGTCTGGAGCTGACAATGGCACCATGCACCT...TTGTATTTTACAATAAACTGCTCCCATGTCCCTCACCTGTGTTTTATTTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150268.8 |
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| CDS-3UTR CAA 90 bp | AATGATTGCATTGTGACCAGAGAGATTTTGAATGAAGCCTCCATCGGGGAATTTATCCCAGCACTTCACTaGTTTGTCTTCTCCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NDCIVTREILNEASIGEFIPALH*FVFSTR Trigger: TCTTGTGGAGAAGACAAACAAGTGAAGTGCTGGGAT...AAATTCCCCGATGGAGGCTTCATTCAAAATCTCTCTGGTCACAATGCAATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029628.11 |
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| CDS CCA 72 bp | CCAGCAGGCCCAGTACGATTTGCATCAACTCTGGTCTaGGACGGTAACGCCACAGCGAGGGACTGTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGPVRFASTLV*DGNATARDCAA Trigger: AGCTGCACAGTCCCTCGCTGTGGCGTTACCGTCCCAGACCAGAGTTGATGCAAATCGTACTGGGCCTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | ATTCATTGCTGTGGGCTGGGAACGGTCAGAAGCCCCTaGGTGTCGGTACTCACTTCCAGCAGGCCCAGTACG | + |
|
Preference number: 6 (lower is better) Translates to: IHCCGLGTVRSP*VSVLTSSRPST Trigger: CGTACTGGGCCTGCTGGAAGTGAGTACCGACACCCAGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | CACTTCCAGCAGGCCCAGTACGATTTGCATCAACTCTaGTCTGGGACGGTAACGCCACAGCGAGGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HFQQAQYDLHQL*SGTVTPQRGTV Trigger: CACAGTCCCTCGCTGTGGCGTTACCGTCCCAGACCAGAGTTGATGCAAATCGTACTGGGCCTGCTGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | AAGATGCCCACTGATAACCCTGTAGAGTTTCCACGGTaGGTGCCACTGGGGTTTGGGCATCGTAGGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KMPTDNPVEFPR*VPLGFGHRRGF Trigger: AAAGCCCCTACGATGCCCAAACCCCAGTGGCACCCACCGTGGAAACTCTACAGGGTTATCAGTGGGCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS GCA 72 bp | CTGTGGCTCTGCAGCCTGGCATCTCACGGTAGCAACTaGATTTGTGTGTCCAGACAAAGTGTGTACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWLCSLASHGSN*ICVSRQSVYTG Trigger: GCCAGTGTACACACTTTGTCTGGACACACAAATGCAGTTGCTACCGTGAGATGCCAGGCTGCAGAGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | GCAGTCAAGGCAACACCGGGTCCTGCTGGGTATGGATaGGTGCCTGTCACCAAATACTCAACATCTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVKATPGPAGYG*VPVTKYSTSCP Trigger: AGGACAAGATGTTGAGTATTTGGTGACAGGCACCCATCCATACCCAGCAGGACCCGGTGTTGCCTTGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | GCGAGGGACTGTGCAGCTGACTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTCAAGGCAACACCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARDCAADSLGIL*ILVSAVKATPG Trigger: ACCCGGTGTTGCCTTGACTGCTGATACTAAGATCCAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029628.11 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | TTGCCGGTCTCCATAATAGAATTCATTGCTGTGGGCTaGGAACGGTCAGAAGCCCCTGGGTGTCGGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPVSIIEFIAVG*ERSEAPGCRYS Trigger: TGAGTACCGACACCCAGGGGCTTCTGACCGTTCCCAGCCCACAGCAATGAATTCTATTATGGAGACCGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS TCA 72 bp | GACTCCTCGTGCTCACGATCACACCACGCACTGTACTaGTGTGGCCAGTCAACGACAGCTTTAATTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DSSCSRSHHALY*CGQSTTALICH Trigger: GTGGCAAATTAAAGCTGTCGTTGACTGGCCACATCAGTACAGTGCGTGGTGTGATCGTGAGCACGAGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | CTCGTGCTCACGATCACACCACGCACTGTACTGATGTaGCCAGTCAACGACAGCTTTAATTTGCCACTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVLTITPRTVLM*PVNDSFNLPLA Trigger: GGCTAGTGGCAAATTAAAGCTGTCGTTGACTGGCCACATCAGTACAGTGCGTGGTGTGATCGTGAGCACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | GCGAGGGACTGTGCAGCTGACTCACTTGGCATTCTCTaGATCTTAGTATCAGCAGTCAAGGCAACACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARDCAADSLGIL*ILVSAVKATPV Trigger: GACAGGTGTTGCCTTGACTGCTGATACTAAGATCCAGAGAATGCCAAGTGAGTCAGCTGCACAGTCCCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122128.2 |
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| CDS GCA 72 bp | TGTGGTATCGTGACTTCCTGTAATGATCTGTGGCTCTaGAGCCTGGCATCTCACGGTAGCAACTGCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGIVTSCNDLWL*SLASHGSNCIC Trigger: ACAAATGCAGTTGCTACCGTGAGATGCCAGGCTGCAGAGCCACAGATCATTACAGGAAGTCACGATACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | AGCGGATGTAAGACCACAGCCCTCACTGATTTCTTATaGTTCGTCAGTGTCACTCGTGTCTTTCCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SGCKTTALTDFL*FVSVTRVFPAT Trigger: AGTGGCTGGAAAGACACGAGTGACACTGACGAACCATAAGAAATCAGTGAGGGCTGTGGTCTTACATCCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CAA 90 bp | TCCGAGCAGTGGAATCTCGACTACAAGTCACCAGGACATCCAATGTaGGGTGCAAATCCAGACCATACACTGCACTTAGATGGCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SEQWNLDYKSPGHPM*GANPDHTLHLDGHD Trigger: ATCATGGCCATCTAAGTGCAGTGTATGGTCTGGATTTGCACCCAACATTGGATGTCCTGGTGACTTGTAGTCGAGATTCCACTGCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS TCA 72 bp | TTTATGGTTCTGTCAGCAGATCCTGTAACGAACCACTaGTTTCCAGGTTCCACAGCGATACACCGAACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FMVLSADPVTNH*FPGSTAIHRTQ Trigger: CTGGGTTCGGTGTATCGCTGTGGAACCTGGAAATCAGTGGTTCGTTACAGGATCTGCTGACAGAACCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS GCA 72 bp | TCTCGACTACAAGTCACCAGGACATCCAATGTTGGGTaGAAATCCAGACCATACACTGCACTTAGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRLQVTRTSNVG*KSRPYTALRWP Trigger: TGGCCATCTAAGTGCAGTGTATGGTCTGGATTTGCACCCAACATTGGATGTCCTGGTGACTTGTAGTCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CCA 72 bp | GGCACGGGTTTTCCATTATCAGCCACAAACATGTCATaGGTCCTCTTCAATGACCTGAACACCAGTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GTGFPLSATNMS*VLFNDLNTSVC Trigger: ACACACACTGGTGTTCAGGTCATTGAAGAGGACCCATGACATGTTTGTGGCTGATAATGGAAAACCCGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CAA 90 bp | ACACCACGCACTGTACTGATGTGGCCAGTCAACGACAGCTTTAATTaGCCACTAGCCAAGTCCCAAATCTTTATGGTTCTGTCAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TPRTVLMWPVNDSFN*PLAKSQIFMVLSAD Trigger: ATCTGCTGACAGAACCATAAAGATTTGGGACTTGGCTAGTGGCAAATTAAAGCTGTCGTTGACTGGCCACATCAGTACAGTGCGTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS TCA 72 bp | CAGCCACAAACATGTCATGGGTCCTCTTCAATGACCTaGACACCAGTGTGTGTACAGAATGCTTCTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: QPQTCHGSSSMT*TPVCVQNASVP Trigger: AGGTACAGAAGCATTCTGTACACACACTGGTGTTCAGGTCATTGAAGAGGACCCATGACATGTTTGTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CAA 72 bp | TGGAATCTCGACTACAAGTCACCAGGACATCCAATGTaGGGTGCAAATCCAGACCATACACTGCACTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WNLDYKSPGHPM*GANPDHTLHLD Trigger: ATCTAAGTGCAGTGTATGGTCTGGATTTGCACCCAACATTGGATGTCCTGGTGACTTGTAGTCGAGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS GCA 72 bp | CCCTTCTCCTTAAGGTTCTCTTTTGAAGTAGGCATATaGAGCACAGGACCATACTCATTGCGAAGCTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: PFSLRFSFEVGI*STGPYSLRSLI Trigger: AATCAAGCTTCGCAATGAGTATGGTCCTGTGCTGCATATGCCTACTTCAAAAGAGAACCTTAAGGAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CAA 72 bp | ACTGTACTGATGTGGCCAGTCAACGACAGCTTTAATTaGCCACTAGCCAAGTCCCAAATCTTTATGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TVLMWPVNDSFN*PLAKSQIFMVL Trigger: CAGAACCATAAAGATTTGGGACTTGGCTAGTGGCAAATTAAAGCTGTCGTTGACTGGCCACATCAGTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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| CDS CAA 90 bp | ATTGACCGCCAGCGTGTTAATGATTGCATTGTGACCAGAGAGATTTaGAATGAAGCCTCCATCGGGGAATTTCCACTGCTTTATGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: IDRQRVNDCIVTREI*NEASIGEFPLLYVI Trigger: GATAACATAAAGCAGTGGAAATTCCCCGATGGAGGCTTCATTCAAAATCTCTCTGGTCACAATGCAATCATTAACACGCTGGCGGTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122128.2 ENSMUST00000150268.8 |
||
| CDS CAA 90 bp | ATAGTGCCGTATCACCTTGTTATATTCAAGATCCCAGCACTTCACTaGTTTGTCTTCTCCACAAGAGAACAAATAAGGACTCCTCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IVPYHLVIFKIPALH*FVFSTREQIRTPRA Trigger: AGCACGAGGAGTCCTTATTTGTTCTCTTGTGGAGAAGACAAACAAGTGAAGTGCTGGGATCTTGAATATAACAAGGTGATACGGCACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
||
| CDS CAA 72 bp | TATCACCTTGTTATATTCAAGATCCCAGCACTTCACTaGTTTGTCTTCTCCACAAGAGAACAAATAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: YHLVIFKIPALH*FVFSTREQIRT Trigger: AGTCCTTATTTGTTCTCTTGTGGAGAAGACAAACAAGTGAAGTGCTGGGATCTTGAATATAACAAGGTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029628.11 ENSMUST00000122128.2 ENSMUST00000150268.8 |
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