Pregenerated sensors for PLPPR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033342Ensembl transcript IDs: ENSMUST00000039564.11, ENSMUST00000106473.5, ENSMUST00000238937.2, ENSMUST00000239347.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGTGGGTGGCGGGGATGCAGAAGAGGAAGCCATGGTCCTGCTCTTaGGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAGAGAGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SWVAGMQKRKPWSCS*GAHSLVGGRGREGA Trigger: AGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGCTTCCTCTTCTGCATCCCCGCCACCCACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR TCA 90 bp | GGTCACTGTATAACCTGTCCCTCAGCCCCTTTCCTGAGAGGTAGCTaGGATGCAGAGATGAGAATCTTCATTTGGACCTCTCTTCTACCA | + |
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Preference number: 1 (lower is better) Translates to: GHCITCPSAPFLRGS*DAEMRIFIWTSLLP Trigger: TGGTAGAAGAGAGGTCCAAATGAAGATTCTCATCTCTGCATCTCAGCTACCTCTCAGGAAAGGGGCTGAGGGACAGGTTATACAGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR TCA 90 bp | CGGATAAGACTTGTGCAGAACTTCTGCCATGCAAACAGATACTACTaGAGTTTTCATCTTGAACAATTTACGTTGACCTGGGCCCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: RIRLVQNFCHANRYY*SFHLEQFTLTWAPK Trigger: CTTTGGGGCCCAGGTCAACGTAAATTGTTCAAGATGAAAACTTCAGTAGTATCTGTTTGCATGGCAGAAGTTCTGCACAAGTCTTATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR CCA 90 bp | GCCTTGAGCAACTGTATAGACCTAGTCAGCTACCCTGCCTTTGCTTaGCATTATGGTCATATCCTTTATTTCAATCCTAGGAAGCAAATT | + |
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Preference number: 1 (lower is better) Translates to: ALSNCIDLVSYPAFA*HYGHILYFNPRKQI Trigger: AATTTGCTTCCTAGGATTGAAATAAAGGATATGACCATAATGCCAAGCAAAGGCAGGGTAGCTGACTAGGTCTATACAGTTGCTCAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCGAGCTCACAGTCTCGTaGGAGGGCGGGGCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSELTVS*EGGAER Trigger: CCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTC...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGGAGCTCACAGTCTCGTaGGAGGGCGGGGCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWELTVS*EGGAER Trigger: CCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTC...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGGAGCTCACAGTCTCGTaGGAGGGCGGGGCAGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPELTVS*EGGAER Trigger: CCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTC...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGCCATGGTCCTGCTCTTaGGGAGCTCACAGTCTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWPWSCS*GAHSLV Trigger: CACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGG...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGAGAGCTCACAGTCTCGTaGGAGGGCGGGGCAGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLSVMNVEATVAYLRKIRELTVS*EGGAER Trigger: CCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTC...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGCGTGGGTGGCGGGGATaGAGAAGAGGAAGCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPRGWRG*RRGSHG Trigger: ACCATGGCTTCCTCTTCTGCATCCCCGCCACCCACG...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGAACACCCACACTTTGTaGTGGGCTTTGTCGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWNTHTL*WALSWV Trigger: CACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTT...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGAGGGATGATGTCCAGTaGAGGGAAAAACCGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWRDDVQ*REKPSA Trigger: AGCAGACGGTTTTTCCCTGCACTGGACATCATCCCT...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGCGTGGGTGGCGGGGATaGAGAAGAGGAAGCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: KMRVSIGKACDCLLLLCMRGWRG*RRGSHG Trigger: ACCATGGCTTCCTCTTCTGCATCCCCGCCACCCACG...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCACCCACACTTTGTGCTaGGCTTTGTCGTGGGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: NFITDLCNVKASKGKFTPTHTLC*ALSWVA Trigger: CGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGT...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGTTCCTGAGAGGTAGCTaGGATGCAGAGATGAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: LCNVKASKGKFTPVWVLLFLRGS*DAEMRI Trigger: GATTCTCATCTCTGCATCTCAGCTACCTCTCAGGAA...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACACAGGTCCTAGGGATTaGACCCAGGGCCTGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHTGPRD*TQGLCM Trigger: CATGCACAGGCCCTGGGTTCAATCCCTAGGACCTGT...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTCCATGGTCCTGCTCTTaGGGAGCTCACAGTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SSVETVFIFNLHGHCITCPWSCS*GAHSLV Trigger: CACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGG...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGAGGGATGATGTCCAGTaGAGGGAAAAACCGTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPRDDVQ*REKPSA Trigger: AGCAGACGGTTTTTCCCTGCACTGGACATCATCCCT...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATACCATGGTCCTGCTCTTaGGGAGCTCACAGTCTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: IEGFFYTNITHVGVSFHIPWSCS*GAHSLV Trigger: CACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGG...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGCAAGTGCCGTACCACTaGATTCCAGCTCCAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: KMRVSIGKACDCLLLLCMQVPYH*IPAPAI Trigger: AATGGCTGGAGCTGGAATTCAGTGGTACGGCACTTG...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTAAACACCCACACTTTGTaGTGGGCTTTGTCGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IWTSLLPKASHSDTRMSLNTHTL*WALSWV Trigger: CACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTT...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGGCTGAGATGCAGAGATaGGAATCTTCATTTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPAEMQR*ESSFGP Trigger: AGGTCCAAATGAAGATTCTCATCTCTGCATCTCAGC...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTAAGGGATGATGTCCAGTaGAGGGAAAAACCGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IWTSLLPKASHSDTRMSLRDDVQ*REKPSA Trigger: AGCAGACGGTTTTTCCCTGCACTGGACATCATCCCT...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATAAACACCCACACTTTGTaGTGGGCTTTGTCGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IEGFFYTNITHVGVSFHINTHTL*WALSWV Trigger: CACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTT...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGGCTGAGATGCAGAGATaGGAATCTTCATTTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: KMRVSIGKACDCLLLLCMAEMQR*ESSFGP Trigger: AGGTCCAAATGAAGATTCTCATCTCTGCATCTCAGC...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTTGCAGAGTGACTCATaGCTTGATCCTCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHLQSDS*LDPPSS Trigger: AGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGGAAATAATGTCATGCTaGATAATAAAAAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWEIMSC*IIKSPQ Trigger: CTGGGGACTTTTTATTATGCAGCATGACATTATTTC...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGAAGCTTTTAAAATACTaGAGACCTTCTGTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LCNVKASKGKFTPVWVLLKLLKY*RPSVPN Trigger: GTTAGGAACAGAAGGTCTGCAGTATTTTAAAAGCTT...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGAAGCTTTTAAAATACTaGAGACCTTCTGTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: VSLRDCRVTHDLILLLLWKLLKY*RPSVPN Trigger: GTTAGGAACAGAAGGTCTGCAGTATTTTAAAAGCTT...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTTAGCCTTAGAGATTaGAGAGTGACTCATGACTTG | + |
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Preference number: 2 (lower is better) Translates to: NFITDLCNVKASKGKFTPVSLRD*RVTHDL Trigger: CAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGATGAGAATCTTCATTTaGACCTCTCTTCTACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LCNVKASKGKFTPVWVLLMRIFI*TSLLPK Trigger: TTTTGGTAGAAGAGAGGTCCAAATGAAGATTCTCAT...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR CAA 90 bp | AAAGTATCTTGGGTTAGCCTTAGAGATTGCAGAGTGACTCATGACTaGATCCTCCTTCTTCTGTGGAGACTGTTTTCATCTTTAACTTAC | + |
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Preference number: 2 (lower is better) Translates to: KVSWVSLRDCRVTHD*ILLLLWRLFSSLTY Trigger: GTAAGTTAAAGATGAAAACAGTCTCCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAACCCAAGATACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCTTCCTGAGAGGTAGCTaGGATGCAGAGATGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: VISFISILGSKFAIANAFFLRGS*DAEMRI Trigger: GATTCTCATCTCTGCATCTCAGCTACCTCTCAGGAA...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTATCGGAAAGGCATGTaGTTGCCTGCTTTTACTATG | + |
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Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHYRKGM*LPAFTM Trigger: CATAGTAAAAGCAGGCAATCACATGCCTTTCCGATA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACGCAGAACTTCTGCCATaGAAACAGATACTACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHAELLP*KQILLK Trigger: CTTCAGTAGTATCTGTTTGCATGGCAGAAGTTCTGC...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTACCCTGCCTTTGCTTaGCATTATGGTCATATCCTT | + |
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Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHYPAFA*HYGHIL Trigger: AAGGATATGACCATAATGCCAAGCAAAGGCAGGGTA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCTTGCAGAGTGACTCATaGCTTGATCCTCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VISFISILGSKFAIANAFLQSDS*LDPPSS Trigger: AGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAA...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGGAAATAATGTCATGCTaGATAATAAAAAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPEIMSC*IIKSPQ Trigger: CTGGGGACTTTTTATTATGCAGCATGACATTATTTC...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGAAGCTTTTAAAATACTaGAGACCTTCTGTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPKLLKY*RPSVPN Trigger: GTTAGGAACAGAAGGTCTGCAGTATTTTAAAAGCTT...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACCTGAAGTTTTCATCTTaGACAATTTACGTTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LKNTIHSREFFPPPLFFHLKFSS*TIYVDL Trigger: CAGGTCAACGTAAATTGTTCAAGATGAAAACTTCAG...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGAAATAATGTCATGCTaGATAATAAAAAGTCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NFITDLCNVKASKGKFTPEIMSC*IIKSPQ Trigger: CTGGGGACTTTTTATTATGCAGCATGACATTATTTC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTAACAAGGTATCATGGCTaGATTTACCTTAATGTATTC | + |
|
Preference number: 2 (lower is better) Translates to: IWTSLLPKASHSDTRMSLTRYHG*IYLNVF Trigger: GAATACATTAAGGTAAATCCAGCCATGATACCTTGT...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCATGAGAATCTTCATTTaGACCTCTCTTCTACCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VISFISILGSKFAIANAFMRIFI*TSLLPK Trigger: TTTTGGTAGAAGAGAGGTCCAAATGAAGATTCTCAT...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CCA 72 bp | AGCCATGGTCCTGCTCTTGAGGAGCTCACAGTCTCGTaGGAGGGCGGGGCAGAGAGGGTGCTGTCAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SHGPALEELTVS*EGGAERVLSSF Trigger: AAAACTTGACAGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR GCA 72 bp | ACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATaGAGAAGAGGAAGCCATGGTCCTGCTCTTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLCAGLCRGWRG*RRGSHGPALEE Trigger: CTCCTCAAGAGCAGGACCATGGCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CCA 72 bp | TCACTGAACACCCACACTTTGTGCTGGGCTTTGTCGTaGGTGGCGGGGATGCAGAAGAGGAAGCCATGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLNTHTLCWALS*VAGMQKRKPWS Trigger: GGACCATGGCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR TCA 72 bp | CCAGGGCCTGTGCATGCTAGGCAAGTGCCGTACCACTaGATTCCAGCTCCAGCCATTGTTCTGACGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGPVHARQVPYH*IPAPAIVLTFS Trigger: AGAAAACGTCAGAACAATGGCTGGAGCTGGAATTCAGTGGTACGGCACTTGCCTAGCATGCACAGGCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR TCA 72 bp | CCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTaGATGGGTATAGGACCAGTAGCCTTGAGCAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPRGNSLPSGSF*MGIGPVALSNC Trigger: ACAGTTGCTCAAGGCTACTGGTCCTATACCCATTCAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR GCA 72 bp | TTTATCATCGTGTTTTCACTGAACACCCACACTTTGTaGTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FIIVFSLNTHTL*WALSWVAGMQK Trigger: CTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAGTGAAAACACGATGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGGCCATGGTCCTGCTCTaGAGGAGCTCACAGTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPAMVLL*RSSQSR Trigger: ACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGC...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CCA 72 bp | AATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTaGGTCCTTTTGAATGGGTATAGGACCAGTAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NVKASKGKFTPV*VLLNGYRTSSL Trigger: AAGGCTACTGGTCCTATACCCATTCAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACACTTTGTGCTGGGCTTaGTCGTGGGTGGCGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LKNTIHSREFFPPPLFFHTLCWA*SWVAGM Trigger: CATCCCCGCCACCCACGACAAAGCCCAGCACAAAGT...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTAGCCATGGTCCTGCTCTaGAGGAGCTCACAGTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: IWTSLLPKASHSDTRMSLAMVLL*RSSQSR Trigger: ACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGC...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACGCCATGGTCCTGCTCTaGAGGAGCTCACAGTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LKNTIHSREFFPPPLFFHAMVLL*RSSQSR Trigger: ACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGC...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGGCCATGGTCCTGCTCTaGAGGAGCTCACAGTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: KMRVSIGKACDCLLLLCMAMVLL*RSSQSR Trigger: ACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGC...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGCTACCCTGCCTTTGCTaGGCATTATGGTCATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LCNVKASKGKFTPVWVLLLPCLC*ALWSYP Trigger: AGGATATGACCATAATGCCAAGCAAAGGCAGGGTAG...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACCTGAACACCCACACTTaGTGCTGGGCTTTGTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKNTIHSREFFPPPLFFHLNTHT*CWALSW Trigger: CCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAG...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR TCA 72 bp | AGAGTTGACTTGTTCGTTTTATCATCGTGTTTTCACTaGACACCCACACTTTGTGCTGGGCTTTGTCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RVDLFVLSSCFH*TPTLCAGLCRG Trigger: CCCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAGTGAAAACACGATGATAAAACGAACAAGTCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGAGAGTGACTCATGACTaGATCCTCCTTCTTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPRVTHD*ILLLLW Trigger: CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCT...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCCTGAACACCCACACTTaGTGCTGGGCTTTGTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VISFISILGSKFAIANAFLNTHT*CWALSW Trigger: CCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAG...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCAGAGTGACTCATGACTaGATCCTCCTTCTTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NFITDLCNVKASKGKFTPRVTHD*ILLLLW Trigger: CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCT...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR TCA 72 bp | CTGCCATGCAAACAGATACTACTGAAGTTTTCATCTTaGACAATTTACGTTGACCTGGGCCCCAAAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCKQILLKFSS*TIYVDLGPKEA Trigger: TGCTTCTTTGGGGCCCAGGTCAACGTAAATTGTTCAAGATGAAAACTTCAGTAGTATCTGTTTGCATGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR GCA 72 bp | GAGCAACTGTATAGACCTAGTCAGCTACCCTGCCTTTaGTTGGCATTATGGTCATATCCTTTATTTCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: EQLYRPSQLPCL*LALWSYPLFQS Trigger: GGATTGAAATAAAGGATATGACCATAATGCCAAGCAAAGGCAGGGTAGCTGACTAGGTCTATACAGTTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGCTACCCTGCCTTTGCTaGGCATTATGGTCATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KMRVSIGKACDCLLLLCMLPCLC*ALWSYP Trigger: AGGATATGACCATAATGCCAAGCAAAGGCAGGGTAG...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGCAACTGAAATCCATTaGGAAGTAACAGAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NFITDLCNVKASKGKFTPATEIH*EVTEKP Trigger: AGGCTTCTCTGTTACTTCCAAATGGATTTCAGTTGC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCAGAGTGACTCATGACTaGATCCTCCTTCTTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VISFISILGSKFAIANAFRVTHD*ILLLLW Trigger: CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCT...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR TCA 72 bp | CTTGTGCAGAACTTCTGCCATGCAAACAGATACTACTaGAGTTTTCATCTTGAACAATTTACGTTGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVQNFCHANRYY*SFHLEQFTLTW Trigger: CCAGGTCAACGTAAATTGTTCAAGATGAAAACTTCAGTAGTATCTGTTTGCATGGCAGAAGTTCTGCACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCGCAACTGAAATCCATTaGGAAGTAACAGAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VISFISILGSKFAIANAFATEIH*EVTEKP Trigger: AGGCTTCTCTGTTACTTCCAAATGGATTTCAGTTGC...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CCA 72 bp | TTAGATTTAACTCTTCCCTTGACTAGTGGTATGGACTaGGCATGTTATCAGTCTTGGCTTTATTTTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LDLTLPLTSGMD*ACYQSWLYFYH Trigger: ATGATAAAAATAAAGCCAAGACTGATAACATGCCCAGTCCATACCACTAGTCAAGGGAAGAGTTAAATCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CCA 72 bp | ATAGTTCTAAGTAGTTGCATCATGGTTAAGCACTCTTaGCTGAGTTTGGTTAATTCGCATGCATCTTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: IVLSSCIMVKHS*LSLVNSHASLI Trigger: AATTAAAGATGCATGCGAATTAACCAAACTCAGCCAAGAGTGCTTAACCATGATGCAACTACTTAGAACTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| 3UTR CAA 72 bp | GGCGGGGATGCAGAAGAGGAAGCCATGGTCCTGCTCTaGAGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDAEEEAMVLL*RSSQSRGRAGQ Trigger: CTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAGCAGGACCATGGCTTCCTCTTCTGCATCCCCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAGAGAGGGTGCTGTCAACTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSQSRGRAGQRGCCQLLEEC*SLASGP Trigger: TGGCCCGGATGCCAATGACCAACATTCCTCGAGTAG...TTGACAGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAGAGAGGGTGCTGTCAATCAGGGCAGCTTCCTTaGATGGGAATGTTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSQSRGRAGQRGCCQSGQLP*MGMFSV Trigger: CACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGA...TTGACAGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSLLEEC*SLASGP Trigger: TGGCCCGGATGCCAATGACCAACATTCCTCGAGTAG...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCTCACCGTCCCTGCCATaGTCACCATCTGGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSSPSLP*SPSGNR Trigger: TCTATTTCCAGATGGTGATCATGGCAGGGACGGTGA...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCCCTGCACGTTCACAGTaGACGTGTCTGTGTATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSPARSQ*TCLCIR Trigger: TCGAATACACAGACACGTTCACTGTGAACGTGCAGG...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR GCA 90 bp | CACCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAACAGCATCACCGTCCCTaGCATGATCACCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPHFVLGFVVGGGDAEEEQHHRP*HDHHLE Trigger: TTCCAGATGGTGATCATGGCAGGGACGGTGATGCTG...TTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAGAGAGGGTGCTGTCAAGCAAAGGCAGTGACGTaGTTCTTTTCCAAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSQSRGRAGQRGCCQAKAVT*FFSKGL Trigger: AAGCCCTTTGGAAAAGAACCACGTCACTGCCTTTGC...TTGACAGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGCGCGCTGCTGTCCTCTaGGCCCGGGTAGGGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: LCNVKASKGKFTPVWVLLRAAVL*ARVGLT Trigger: CGTAAGCCCTACCCGGGCCCAGAGGACAGCAGCGCG...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| 3UTR CAA 72 bp | GTGTTTTCACTGAACACCCACACTTTGTGCTGGGCTTaGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSLNTHTLCWA*SWVAGMQKRKP Trigger: TGGCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTGTTCAGTGAAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | CACCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGGTTCGGCGTACCAGTaGGTTTATATAGCAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: HPHFVLGFVVGGGDAEEEGSAYQ*VYIATI Trigger: GATTGTTGCTATATAAACCCACTGGTACGCCGAACC...TTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCATCACATCTGACCAATaGTTTCGATATTCCGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSITSDQ*FRYSAT Trigger: AGTAGCGGAATATCGAAATCATTGGTCAGATGTGAT...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | CACCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAATCACATCTGACCAATaGTTTCGATATTCCGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: HPHFVLGFVVGGGDAEEEITSDQ*FRYSAT Trigger: AGTAGCGGAATATCGAAATCATTGGTCAGATGTGAT...TTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR GCA 90 bp | CACCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAATTGTCCCTGTGTATATaGCCATTTTCTGGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPHFVLGFVVGGGDAEEELSLCI*PFSGCL Trigger: AAGACAACCAGAAAATGGGCATATACACAGGGACAA...TTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTACGCGCTGCTGTCCTCTaGGCCCGGGTAGGGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: IWTSLLPKASHSDTRMSLRAAVL*ARVGLT Trigger: CGTAAGCCCTACCCGGGCCCAGAGGACAGCAGCGCG...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATAAACTCTGTTATGAATGTATGGTAAATAGGGATGATGTCCAGTGCAGGCGCGCTGCTGTCCTCTaGGCCCGGGTAGGGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: SNKLCYECMVNRDDVQCRRAAVL*ARVGLT Trigger: CGTAAGCCCTACCCGGGCCCAGAGGACAGCAGCGCG...CCTGCACTGGACATCATCCCTATTTACCATACATTCATAACAGAGTTTATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGTCAGGGCAGCTTCCTTaGATGGGAATGTTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCNVKASKGKFTPVWVLLSGQLP*MGMFSV Trigger: CACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGA...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGGGTTCGGCGTACCAGTaGGTTTATATAGCAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LCNVKASKGKFTPVWVLLGSAYQ*VYIATI Trigger: GATTGTTGCTATATAAACCCACTGGTACGCCGAACC...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGGAGCGCTGTGTAGTTTaGCTTACACAAAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLRDCRVTHDLILLLLWERCVV*LTQSQK Trigger: TTTCTGGCTTTGTGTAAGCCAAACTACACAGCGCTC...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGGAGCGCTGTGTAGTTTaGCTTACACAAAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCNVKASKGKFTPVWVLLERCVV*LTQSQK Trigger: TTTCTGGCTTTGTGTAAGCCAAACTACACAGCGCTC...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGACTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSVMNVEATVAYLRKIRLLEEC*SLASGP Trigger: TGGCCCGGATGCCAATGACCAACATTCCTCGAGTAG...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGACCTGCACGTTCACAGTaGACGTGTCTGTGTATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSVMNVEATVAYLRKIRPARSQ*TCLCIR Trigger: TCGAATACACAGACACGTTCACTGTGAACGTGCAGG...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGCAGCATCACCGTCCCTaGCATGATCACCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KMRVSIGKACDCLLLLCMQHHRP*HDHHLE Trigger: TTCCAGATGGTGATCATGGCAGGGACGGTGATGCTG...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGAAGGGATGATGTCCAGTaGAGGGAAAAACCGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSVMNVEATVAYLRKIRRDDVQ*REKPSA Trigger: AGCAGACGGTTTTTCCCTGCACTGGACATCATCCCT...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| 3UTR CAA 72 bp | TGGGTTAGCCTTAGAGATTGCAGAGTGACTCATGACTaGATCCTCCTTCTTCTGTGGAGACTGTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WVSLRDCRVTHD*ILLLLWRLFSS Trigger: AGATGAAAACAGTCTCCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACCCTGCACGTTCACAGTaGACGTGTCTGTGTATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LKNTIHSREFFPPPLFFHPARSQ*TCLCIR Trigger: TCGAATACACAGACACGTTCACTGTGAACGTGCAGG...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTCAGCATCACCGTCCCTaGCATGATCACCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVETVFIFNLHGHCITCQHHRP*HDHHLE Trigger: TTCCAGATGGTGATCATGGCAGGGACGGTGATGCTG...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTATCAGGGCAGCTTCCTTaGATGGGAATGTTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IWTSLLPKASHSDTRMSLSGQLP*MGMFSV Trigger: CACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGA...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVETVFIFNLHGHCITCLLEEC*SLASGP Trigger: TGGCCCGGATGCCAATGACCAACATTCCTCGAGTAG...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGCAAAGGCAGTGACGTaGTTCTTTTCCAAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFITDLCNVKASKGKFTPAKAVT*FFSKGL Trigger: AAGCCCTTTGGAAAAGAACCACGTCACTGCCTTTGC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGGTTCGGCGTACCAGTaGGTTTATATAGCAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: NFITDLCNVKASKGKFTPGSAYQ*VYIATI Trigger: GATTGTTGCTATATAAACCCACTGGTACGCCGAACC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGAGCGCTGTGTAGTTTaGCTTACACAAAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFITDLCNVKASKGKFTPERCVV*LTQSQK Trigger: TTTCTGGCTTTGTGTAAGCCAAACTACACAGCGCTC...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATATCACCGTCCCTGCCATaGTCACCATCTGGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEGFFYTNITHVGVSFHISPSLP*SPSGNR Trigger: TCTATTTCCAGATGGTGATCATGGCAGGGACGGTGA...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATATCAGGGCAGCTTCCTTaGATGGGAATGTTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IEGFFYTNITHVGVSFHISGQLP*MGMFSV Trigger: CACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGA...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGGACGTGGTTCTTAATTaGAGGTGTTCACAGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KMRVSIGKACDCLLLLCMDVVLN*RCSQWL Trigger: TAGCCACTGTGAACACCTCCAATTAAGAACCACGTC...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCATCACATCTGACCAATaGTTTCGATATTCCGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: NFITDLCNVKASKGKFTPITSDQ*FRYSAT Trigger: AGTAGCGGAATATCGAAATCATTGGTCAGATGTGAT...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCTGGAGGTGTTCACAGTaGCTAATCCCCATTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VISFISILGSKFAIANAFWRCSQ*LIPIIQ Trigger: CTGGATAATGGGGATTAGCCACTGTGAACACCTCCA...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGATTATCTCTACAAAGATaGAGCAGGGCAAAATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSVMNVEATVAYLRKIRLSLQR*SRAKLC Trigger: ACACAATTTTGCCCTGCTTCATCTTTGTAGAGATAA...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCGGTTCGGCGTACCAGTaGGTTTATATAGCAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VISFISILGSKFAIANAFGSAYQ*VYIATI Trigger: GATTGTTGCTATATAAACCCACTGGTACGCCGAACC...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATAGAGCGCTGTGTAGTTTaGCTTACACAAAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEGFFYTNITHVGVSFHIERCVV*LTQSQK Trigger: TTTCTGGCTTTGTGTAAGCCAAACTACACAGCGCTC...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTTTGTCCCTGTGTATATaGCCATTTTCTGGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVETVFIFNLHGHCITCLSLCI*PFSGCL Trigger: AAGACAACCAGAAAATGGGCATATACACAGGGACAA...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTCATCTTCAATATATTaGGTTTGGAAGACCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKNTIHSREFFPPPLFFHSSSIY*VWKTFS Trigger: GGAAAAGGTCTTCCAAACCCAATATATTGAAGATGA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATAAACTCTGTTATGAATGTATGGTAAATAGGGATGATGTCCAGTGCAGGTTTCAAAATCTCTTGTaGCTAATTGCAGGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNKLCYECMVNRDDVQCRFQNLL*LIAGKT Trigger: TGTTTTGCCTGCAATTAGCCACAAGAGATTTTGAAA...CCTGCACTGGACATCATCCCTATTTACCATACATTCATAACAGAGTTTATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000239347.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATATTTCAAAATCTCTTGTaGCTAATTGCAGGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: IEGFFYTNITHVGVSFHIFQNLL*LIAGKT Trigger: TGTTTTGCCTGCAATTAGCCACAAGAGATTTTGAAA...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS GCA 90 bp | GGACGCCAGCGGCCAGCGAGTAGAGGAGCACCGGGGGCACCGCGCTaGTGTCCTCTGGGCCCGGGTAGGGCTTACGGTAGGCGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRQRPASRGAPGAPR*CPLGPGRAYGRRCR Trigger: ACGACAGCGCCTACCGTAAGCCCTACCCGGGCCCAGAGGACAGCAGCGCGGTGCCCCCGGTGCTCCTCTACTCGCTGGCCGCTGGCGTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
||
| CDS GCA 90 bp | AGCGTAGACACTCAGGGCAGCTTCCTTGGATGGGAATGTTTTCCGTaGTCGCATGATGAGGTCTGGGTTGCCTGTGCATGCTTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVDTQGSFLGWECFP*SHDEVWVACACFLP Trigger: GGGGAGGAAGCATGCACAGGCAACCCAGACCTCATCATGCGAGCACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAGTGTCTACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | CACCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAACTCAGGGCAGCTTCCTaGGATGGGAATGTTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HPHFVLGFVVGGGDAEEELRAAS*DGNVFR Trigger: ACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAG...TTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS CCA 90 bp | CGTCAGATACGTGGCAGCGTAGACACTCAGGGCAGCTTCCTTGGATaGGAATGTTTTCCGTGCTCGCATGATGAGGTCTGGGTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQIRGSVDTQGSFLG*ECFPCSHDEVWVAC Trigger: ACAGGCAACCCAGACCTCATCATGCGAGCACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAGTGTCTACGCTGCCACGTATCTGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACTTTGTGCTGGGCTTTGTCGTGGGTGGCGGGGATGCAGAAGAGGAAGCTATTCCGCTACTCTGTaGAGTCCAGTAAGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTLCAGLCRGWRGCRRGSYSATL*SPVRKA Trigger: GGCCTTTCTTACTGGACTCAACAGAGTAGCGGAATA...GCTTCCTCTTCTGCATCCCCGCCACCCACGACAAAGCCCAGCACAAAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTGAGGAGCTCACAGTCTCGTGGGAGGGCGGGGCAGAGAGGGTGCTGTCAAGGTTTTCAAAATCTCTaGTGGCTAATTGCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLRSSQSRGRAGQRGCCQGFQNL*WLIAGK Trigger: TTTGCCTGCAATTAGCCACAAGAGATTTTGAAAACC...TTGACAGCACCCTCTCTGCCCCGCCCTCCCACGAGACTGTGAGCTCCTCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS GCA 90 bp | GAATGTTTTCCGTGCTCGCATGATGAGGTCTGGGTTGCCTGTGCATaGTTCCTCCCCACTGATAAACTGTGTGTACTGCTGACATCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ECFPCSHDEVWVACA*FLPTDKLCVLLTSE Trigger: CTCGGATGTCAGCAGTACACACAGTTTATCAGTGGGGAGGAAGCATGCACAGGCAACCCAGACCTCATCATGCGAGCACGGAAAACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CCA 90 bp | TTCCGCAAAGGCAGTGACGTGGTTCTTAATTGGAGGTGTTCACAGTaGCTAATCCCCATTATCCAGCCGAAGAGCCTGGCAAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FRKGSDVVLNWRCSQ*LIPIIQPKSLARQS Trigger: AGACTGCCTTGCCAGGCTCTTCGGCTGGATAATGGGGATTAGCCACTGTGAACACCTCCAATTAAGAACCACGTCACTGCCTTTGCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS CCA 90 bp | AGCTTCCTTGGATGGGAATGTTTTCCGTGCTCGCATGATGAGGTCTaGGTTGCCTGTGCATGCTTCCTCCCCACTGATAAACTGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFLGWECFPCSHDEV*VACACFLPTDKLCV Trigger: TACACACAGTTTATCAGTGGGGAGGAAGCATGCACAGGCAACCCAGACCTCATCATGCGAGCACGGAAAACATTCCCATCCAAGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CCA 90 bp | GTGGTTCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATTaGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVLFQRAFYSRNVGH*HPGHIVPVYMPIFW Trigger: CCAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
||
| CDS CCA 90 bp | GCAGAGATGTTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEMLPFPKGFLLEEC*SLASGPHCPCVYAH Trigger: ATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAACATCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
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| CDS CCA 90 bp | GAAGACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATTaGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDLFQRAFYSRNVGH*HPGHIVPVYMPIFW Trigger: CCAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS-3UTR CAA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGCTCAGGGCAGCTTCCTaGGATGGGAATGTTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLRDCRVTHDLILLLLWLRAAS*DGNVFR Trigger: ACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAG...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS CCA 90 bp | TGTTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATTaGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CYLFQRAFYSRNVGH*HPGHIVPVYMPIFW Trigger: CCAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGCTCAGGGCAGCTTCCTaGGATGGGAATGTTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLSLTYVMLRPPRGNSLPLRAAS*DGNVFR Trigger: ACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAG...CGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | TTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCGTCTGGGTCCTTTTGGCAAGTCTGGTTCCTTaGGCTTTGATAGTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LCNVKASKGKFTPVWVLLASLVP*ALIVLV Trigger: TACCAGCACTATCAAAGCCAAAGGAACCAGACTTGC...CAAAAGGACCCAGACGGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGTATTCCGCTACTCTGTaGAGTCCAGTAAGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLRDCRVTHDLILLLLWYSATL*SPVRKA Trigger: GGCCTTTCTTACTGGACTCAACAGAGTAGCGGAATA...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGATCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLSVMNVEATVAYLRKIRSTRGM*VIGIRA Trigger: GGCCCGGATGCCAATGACCAACATTCCTCGAGTAGA...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAGTGTCATGAATGTTGAGGCAACTGTGGCATATTTGAGAAAAATAAGACTCAGGGCAGCTTCCTaGGATGGGAATGTTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLSVMNVEATVAYLRKIRLRAAS*DGNVFR Trigger: ACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAG...TCTTATTTTTCTCAAATATGCCACAGTTGCCTCAACATTCATGACACTGAGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTATCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IWTSLLPKASHSDTRMSLSTRGM*VIGIRA Trigger: GGCCCGGATGCCAATGACCAACATTCCTCGAGTAGA...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KMRVSIGKACDCLLLLCMSTRGM*VIGIRA Trigger: GGCCCGGATGCCAATGACCAACATTCCTCGAGTAGA...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS TCA 90 bp | GCTATAGATATTCCGACTAGGAAGCCTGCTATCACATCTGACCAATaGTTTCGATATTCCGCTACTCTGTTGAGTCCAGTAAGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AIDIPTRKPAITSDQ*FRYSATLLSPVRKA Trigger: GGCCTTTCTTACTGGACTCAACAGAGTAGCGGAATATCGAAATCATTGGTCAGATGTGATAGCAGGCTTCCTAGTCGGAATATCTATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSVETVFIFNLHGHCITCSTRGM*VIGIRA Trigger: GGCCCGGATGCCAATGACCAACATTCCTCGAGTAGA...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCCTTAGAGATTGCAGAGTGACTCATGACTTGATCCTCCTTCTTCTGTGGGGTTTTCAAAATCTCTaGTGGCTAATTGCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSLRDCRVTHDLILLLLWGFQNL*WLIAGK Trigger: TTTGCCTGCAATTAGCCACAAGAGATTTTGAAAACC...CCACAGAAGAAGGAGGATCAAGTCATGAGTCACTCTGCAATCTCTAAGGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATAATGATGAGGTCTGGGTaGCCTGTGCATGCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IEGFFYTNITHVGVSFHIMMRSG*PVHASS Trigger: GGAGGAAGCATGCACAGGCAACCCAGACCTCATCAT...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTATTCCGCTACTCTGTaGAGTCCAGTAAGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKNTIHSREFFPPPLFFHYSATL*SPVRKA Trigger: GGCCTTTCTTACTGGACTCAACAGAGTAGCGGAATA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | TCTTCTGTGGAGACTGTTTTCATCTTTAACTTACATGGTCACTGTATAACCTGTGCAAGTCTGGTTCCTTaGGCTTTGATAGTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSVETVFIFNLHGHCITCASLVP*ALIVLV Trigger: TACCAGCACTATCAAAGCCAAAGGAACCAGACTTGC...ACAGGTTATACAGTGACCATGTAAGTTAAAGATGAAAACAGTCTCCACAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTACAGGGCAAAATTGTGTaGCTTCTAAACTCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IWTSLLPKASHSDTRMSLQGKIV*LLNSGS Trigger: AGACCCAGAGTTTAGAAGCAACACAATTTTGCCCTG...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCGCAAGTCTGGTTCCTTaGGCTTTGATAGTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VISFISILGSKFAIANAFASLVP*ALIVLV Trigger: TACCAGCACTATCAAAGCCAAAGGAACCAGACTTGC...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | AAAATGAGAGTCTCTATCGGAAAGGCATGTGATTGCCTGCTTTTACTATGTATGGGTTTTCAAAATCTCTaGTGGCTAATTGCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KMRVSIGKACDCLLLLCMGFQNL*WLIAGK Trigger: TTTGCCTGCAATTAGCCACAAGAGATTTTGAAAACC...CATACATAGTAAAAGCAGGCAATCACATGCCTTTCCGATAGAGACTCTCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACGGTTTTCAAAATCTCTaGTGGCTAATTGCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKNTIHSREFFPPPLFFHGFQNL*WLIAGK Trigger: TTTGCCTGCAATTAGCCACAAGAGATTTTGAAAACC...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | AACTTTATCACTGACTTATGTAATGTTAAGGCCTCCAAGGGGAAATTCACTCCCTGTCTTCCTTTAAAATaGTTTACCACGCATACAACC | + |
|
Preference number: 5 (lower is better) Translates to: NFITDLCNVKASKGKFTPCLPLK*FTTHTT Trigger: GGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACA...GGGAGTGAATTTCCCCTTGGAGGCCTTAACATTACATAAGTCAGTGATAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | ATTTGGACCTCTCTTCTACCAAAAGCCTCACATTCAGACACTAGAATGTCATTATGTCTTCCTTTAAAATaGTTTACCACGCATACAACC | + |
|
Preference number: 5 (lower is better) Translates to: IWTSLLPKASHSDTRMSLCLPLK*FTTHTT Trigger: GGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACA...TAATGACATTCTAGTGTCTGAATGTGAGGCTTTTGGTAGAAGAGAGGTCCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAAATACAATACACAGCAGAGAATTCTTTCCTCCCCCACTGTTCTTTCACTGTCTTCCTTTAAAATaGTTTACCACGCATACAACC | + |
|
Preference number: 5 (lower is better) Translates to: LKNTIHSREFFPPPLFFHCLPLK*FTTHTT Trigger: GGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACA...GTGAAAGAACAGTGGGGGAGGAAAGAATTCTCTGCTGTGTATTGTATTTTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGGGTTTCTTTTATACAAATATAACCCATGTGGGGGTTTCTTTCCACATATGTCTTCCTTTAAAATaGTTTACCACGCATACAACC | + |
|
Preference number: 5 (lower is better) Translates to: IEGFFYTNITHVGVSFHICLPLK*FTTHTT Trigger: GGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACA...TATGTGGAAAGAAACCCCCACATGGGTTATATTTGTATAAAAGAAACCCTCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS-3UTR CAA 90 bp | GTCATATCCTTTATTTCAATCCTAGGAAGCAAATTTGCCATTGCTAATGCTTTCTTCAATATATTGGGTTaGGAAGACCTTTTCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VISFISILGSKFAIANAFFNILG*EDLFQR Trigger: CCTTTGGAAAAGGTCTTCCAAACCCAATATATTGAA...GAAAGCATTAGCAATGGCAAATTTGCTTCCTAGGATTGAAATAAAGGATATGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
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| CDS CCA 72 bp | GTAGAGGAGCACCGGGGGCACCGCGCTGCTGTCCTCTaGGCCCGGGTAGGGCTTACGGTAGGCGCTGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VEEHRGHRAAVL*ARVGLTVGAVV Trigger: CACGACAGCGCCTACCGTAAGCCCTACCCGGGCCCAGAGGACAGCAGCGCGGTGCCCCCGGTGCTCCTCTAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 |
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| CDS GCA 72 bp | CCGTGCTCGCATGATGAGGTCTGGGTTGCCTGTGCATaGTTCCTCCCCACTGATAAACTGTGTGTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PCSHDEVWVACA*FLPTDKLCVLL Trigger: CAGCAGTACACACAGTTTATCAGTGGGGAGGAAGCATGCACAGGCAACCCAGACCTCATCATGCGAGCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS GCA 72 bp | ACTCAGGGCAGCTTCCTTGGATGGGAATGTTTTCCGTaGTCGCATGATGAGGTCTGGGTTGCCTGTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: TQGSFLGWECFP*SHDEVWVACAC Trigger: GCATGCACAGGCAACCCAGACCTCATCATGCGAGCACGGAAAACATTCCCATCCAAGGAAGCTGCCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CCA 72 bp | GGCAGTGACGTGGTTCTTAATTGGAGGTGTTCACAGTaGCTAATCCCCATTATCCAGCCGAAGAGCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSDVVLNWRCSQ*LIPIIQPKSLA Trigger: TGCCAGGCTCTTCGGCTGGATAATGGGGATTAGCCACTGTGAACACCTCCAATTAAGAACCACGTCACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
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| CDS CCA 72 bp | TTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATTaGCATCCGGGCCACATTGTCCCTGTGTATATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FQRAFYSRNVGH*HPGHIVPVYMP Trigger: GGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS CCA 72 bp | GGTTCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCACATTGTCCCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSFPKGFLLEEC*SLASGPHCPCV Trigger: TACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
||
| CDS CCA 72 bp | AGACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCACATTGTCCCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPFPKGFLLEEC*SLASGPHCPCV Trigger: TACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
||
| CDS CAA 72 bp | ACTGTGTGTACTGCTGACATCCGAGCGCTGTGTAGTTaGGCTTACACAAAGCCAGAAAGTGTGGAGCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TVCTADIRALCS*AYTKPESVELG Trigger: ACCTAGCTCCACACTTTCTGGCTTTGTGTAAGCCAAACTACACAGCGCTCGGATGTCAGCAGTACACACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS CAA 72 bp | TTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATaGGCATCCGGGCCACATTGTCCCTGTGTATATGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPKGFLLEECWS*ASGPHCPCVYA Trigger: GGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
||
| CDS CAA 72 bp | TGGTTCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCCACATTGTCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WFFSKGLSTRGM*VIGIRATLSLC Trigger: ACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
||
| CDS CAA 72 bp | GTTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCCACATTGTCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VTFSKGLSTRGM*VIGIRATLSLC Trigger: ACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
||
| CDS CAA 72 bp | AAGACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCCACATTGTCCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KTFSKGLSTRGM*VIGIRATLSLC Trigger: ACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
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| CDS CAA 90 bp | CGTGGTTCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATaGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGSFPKGFLLEECWS*ASGPHCPCVYAHFL Trigger: CAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGAACCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039564.11 ENSMUST00000239347.2 |
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| CDS CAA 90 bp | TGCAGAGATGTTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTaGGTCATTGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CRDVTFSKGLSTRGM*VIGIRATLSLCICP Trigger: TGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAACATCTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
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| CDS CAA 90 bp | GGAAGACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATaGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRPFPKGFLLEECWS*ASGPHCPCVYAHFL Trigger: CAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
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| CDS CCA 72 bp | TTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTaGTCATTGGCATCCGGGCCACATTGTCCCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LPFPKGFLLEEC*SLASGPHCPCV Trigger: TACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
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| CDS CCA 72 bp | TGTGACTTCCGCAAAGGCAGTGACGTGGTTCTTAATTaGAGGTGTTCACAGTGGCTAATCCCCATTATCCAG | + |
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Preference number: 6 (lower is better) Translates to: CDFRKGSDVVLN*RCSQWLIPIIQ Trigger: CTGGATAATGGGGATTAGCCACTGTGAACACCTCCAATTAAGAACCACGTCACTGCCTTTGCGGAAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238937.2 |
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| CDS CAA 72 bp | CCCAAGCACAGGACAGGCTTAGCAAGTCTGGTTCCTTaGGCTTTGATAGTGCTGGTAATGTACATCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PKHRTGLASLVP*ALIVLVMYIVR Trigger: TCTGACGATGTACATTACCAGCACTATCAAAGCCAAAGGAACCAGACTTGCTAAGCCTGTCCTGTGCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CAA 90 bp | CACATTAATCCCAAGCACAGGACAGGCTTAGCAAGTCTGGTTCCTTaGGCTTTGATAGTGCTGGTAATGTACATCGTCAGATACGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HINPKHRTGLASLVP*ALIVLVMYIVRYVA Trigger: TGCCACGTATCTGACGATGTACATTACCAGCACTATCAAAGCCAAAGGAACCAGACTTGCTAAGCCTGTCCTGTGCTTGGGATTAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CAA 90 bp | GGGCTTTCTACTCGAGGAATGTTGGTCATTGGCATCCGGGCCACATaGTCCCTGTGTATATGCCCATTTTCTGGTTGTCTTCCTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: GLSTRGMLVIGIRAT*SLCICPFSGCLPLK Trigger: TTTTAAAGGAAGACAACCAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CAA 90 bp | ATGTTACCTTTTCCAAAGGGCTTTCTACTCGAGGAATGTTGGTCATaGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: MLPFPKGFLLEECWS*ASGPHCPCVYAHFL Trigger: CAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCAATGACCAACATTCCTCGAGTAGAAAGCCCTTTGGAAAAGGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106473.5 |
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| CDS CAA 72 bp | CACAGGACAGGCTTAGCAAGTCTGGTTCCTTTGGCTTaGATAGTGCTGGTAATGTACATCGTCAGATACGTG | + |
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Preference number: 6 (lower is better) Translates to: HRTGLASLVPLA*IVLVMYIVRYV Trigger: CACGTATCTGACGATGTACATTACCAGCACTATCAAAGCCAAAGGAACCAGACTTGCTAAGCCTGTCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS TCA 72 bp | ATTCCGACTAGGAAGCCTGCTATCACATCTGACCAATaGTTTCGATATTCCGCTACTCTGTTGAGTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: IPTRKPAITSDQ*FRYSATLLSPV Trigger: TACTGGACTCAACAGAGTAGCGGAATATCGAAATCATTGGTCAGATGTGATAGCAGGCTTCCTAGTCGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CAA 90 bp | TGGCATCCGGGCCACATTGTCCCTGTGTATATGCCCATTTTCTGGTaGTCTTCCTTTAAAATTGTTTACCACGCATACAACCAGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: WHPGHIVPVYMPIFW*SSFKIVYHAYNQKY Trigger: GTATTTCTGGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACAACCAGAAAATGGGCATATACACAGGGACAATGTGGCCCGGATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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| CDS CAA 72 bp | TGTATATGCCCATTTTCTGGTTGTCTTCCTTTAAAATaGTTTACCACGCATACAACCAGAAATACTGCTATA | + |
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Preference number: 6 (lower is better) Translates to: CICPFSGCLPLK*FTTHTTRNTAI Trigger: TATAGCAGTATTTCTGGTTGTATGCGTGGTAAACAATTTTAAAGGAAGACAACCAGAAAATGGGCATATACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039564.11 ENSMUST00000106473.5 ENSMUST00000238937.2 ENSMUST00000239347.2 |
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