Pregenerated sensors for PLPPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063446Ensembl transcript IDs: ENSMUST00000076670.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTATATATGTaGGGGCAGGTGGTTAACACTTGTGATGAACAGAGCCTTAACAGC | + |
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Preference number: 1 (lower is better) Translates to: LPGFIALKTTDALYM*GQVVNTCDEQSLNS Trigger: GCTGTTAAGGCTCTGTTCATCACAAGTGTTAACCACCTGCCCTCACATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 90 bp | AGAAGCACAGACACTCCACAGTTCTTCAAACACCGCCAACTGAAATaGAACACAGAGCACAGGAGCCAGACTACATTTTGTGATAACTTT | + |
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Preference number: 1 (lower is better) Translates to: RSTDTPQFFKHRQLK*NTEHRSQTTFCDNF Trigger: AAAGTTATCACAAAATGTAGTCTGGCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CCA 90 bp | TACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTaGGACTTCCTTTTGTCTGTAGCATCCATGAACCATCTCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: YRTEDRAQSLQIILS*DFLLSVASMNHLSR Trigger: TCTACTGAGATGGTTCATGGATGCTACAGACAAAAGGAAGTCCCAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR GCA 90 bp | TGTATGTCACAGTGTTTTAGAGTTTATATCCCTCCCTGGGTTCATTaGCCTGAAAACAACAGATGCATTATATATGTGAGGGCAGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: CMSQCFRVYIPPWVH*PENNRCIIYVRAGG Trigger: ACCACCTGCCCTCACATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAAAACACTGTGACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR GCA 90 bp | TTAATAAATGAAGGAATTCTTTCACCTTATTTTAACACATATGTATaGCTATTTGTGTACAGTCATTCCTTCGCCCCCTGCTTCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LINEGILSPYFNTYV*LFVYSHSFAPCFCL Trigger: CAGACAGAAGCAGGGGGCGAAGGAATGACTGTACACAAATAGGCATACATATGTGTTAAAATAAGGTGAAAGAATTCCTTCATTTATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAACCTGAGGCCACTGAATATCTTAAGGGTACGCAGAGGCTTTATTAAAGTGCCCTCTCTCATGGACTaGGAAGCACAGACACTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LNLRPLNILRVRRGFIKVPSLMD*EAQTLH Trigger: GTGGAGTGTCTGTGCTTCTCAGTCCATGAGAGAGGG...CACTTTAATAAAGCCTCTGCGTACCCTTAAGATATTCAGTGGCCTCAGGTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCATGGACTGAGAAGCACAGACACTCCACAGTTCTTCAAACACCGCCAATGTGTTTTGAAGAATTaGACTGGAAGGTTGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSHGLRSTDTPQFFKHRQCVLKN*TGRLLE Trigger: TTCCAGCAACCTTCCAGTTCAATTCTTCAAAACACA...TTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGCTTCTCAGTCCATGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGTTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTACACCGCCAACTGAAATaGAACACAGAGCACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LEFISLPGFIALKTTDALHRQLK*NTEHRS Trigger: GCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTG...TAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 90 bp | GACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGGGACTTCCTTTaGTCTGTAGCATCCATGAACCATCTCAGTAGACACATCACACCA | + |
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Preference number: 2 (lower is better) Translates to: DRAQSLQIILSWDFL*SVASMNHLSRHITP Trigger: TGGTGTGATGTGTCTACTGAGATGGTTCATGGATGCTACAGACAAAAGGAAGTCCCAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAACCTGAGGCCACTGAATATCTTAAGGGTACGCAGAGGCTTTATTAAAGTGACAAAACTGTTGAGTTaGCAGGAAAGGCTGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LNLRPLNILRVRRGFIKVTKLLS*QERLVL Trigger: AAGCACCAGCCTTTCCTGTCAACTCAACAGTTTTGT...CACTTTAATAAAGCCTCTGCGTACCCTTAAGATATTCAGTGGCCTCAGGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | AGAATGGGGCAGAGCTCGACCAAGATGTTGGAACTAGTGTATGTCACAGTGTTTCTGGGTTCATTGCCCTaGAAACAACAGATGCATTAT | + |
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Preference number: 2 (lower is better) Translates to: RMGQSSTKMLELVYVTVFLGSLP*KQQMHY Trigger: ATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAG...AAACACTGTGACATACACTAGTTCCAACATCTTGGTCGAGCTCTGCCCCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGAATACCCTATACACCCTGGGCTATGGAAGCAGAGTCTGTGACCACAGATGCTTTAACTGGGAATaGAGTCAACTATTTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PENTLYTLGYGSRVCDHRCFNWE*SQLFTK Trigger: CTTTGTAAATAGTTGACTGCATTCCCAGTTAAAGCA...TCTGTGGTCACAGACTCTGCTTCCATAGCCCAGGGTGTATAGGGTATTCTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAACCTGAGGAATGAATCTCACATGCTAGATTGGAAGGTTTACCCTCAACCTAAAATTCAAAACTTCTaGAGGAGGCAGCAACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PNLRNESHMLDWKVYPQPKIQNF*RRQQLW Trigger: CCACAGTTGCTGCCTCCTCCAGAAGTTTTGAATTTT...AGGTTGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAATGACCTTTCAGCATGCCCCTGTTTAATGGTTCATCTAATCCCCTCTCTTGTCTTCACAGTTTaGCTTGAGTATCTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLNDLSACPCLMVHLIPSLVFTV*LEYLCV Trigger: AACACACAGATACTCAAGTCAAACTGTGAAGACAAG...AGAGGGGATTAGATGAACCATTAAACAGGGGCATGCTGAAAGGTCATTCAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAACCTGAGGAATGAATCTCACATGCTAGATTGGAAGGTTTACCCTCAACCTCAAATCATTCTTTCCTaGGACTTCCTTTTGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: PNLRNESHMLDWKVYPQPQIILS*DFLLSV Trigger: TACAGACAAAAGGAAGTCCCAGGAAAGAATGATTTG...AGGTTGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAACAGAGCCTTAACAGCTCTTTTCTCTGACTTTAGTCAGATACTACTTAGATCAAACACCGCCAACTaGAATGAAACACAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: MNRALTALFSDFSQILLRSNTAN*NETQST Trigger: TGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGA...TCTAAGTAGTATCTGACTAAAGTCAGAGAAAAGAGCTGTTAAGGCTCTGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCATACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGAATGTGATTCTTCAATaGACACTTGAACAACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSIQDRRQSSESTNHSFLNVILQ*TLEQQE Trigger: TTCCTGTTGTTCAAGTGTGCATTGAAGAATCACATT...CAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTATGCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR TCA 90 bp | ACATCACACCAAGAAGGGCTAAACTTGATTCAGAGGCATCATGTAACAGAAATAAGTATCTGTGTGTTTTaGAGAATTGAACTGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: TSHQEGLNLIQRHHVTEISICVF*RIELEG Trigger: ACCTTCCAGTTCAATTCTTCAAAACACACAGATACT...TATTTCTGTTACATGATGCCTCTGAATCAAGTTTAGCCCTTCTTGGTGTGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR GCA 72 bp | TCACCTGCCCAAGGTCAGAATCCCAGACTGACCTTGTaGTCTGTAGGATGGCGAGGCCATTATCTAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: SPAQGQNPRLTL*SVGWRGHYLRK Trigger: CTTTCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGATTCTGACCTTGGGCAGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | GCACAGACACTCCACAGTTCTTCAAACACCGCCAACTaGAATGAAACACAGAGCACAGGAGCCAGACTACAT | + |
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Preference number: 3 (lower is better) Translates to: AQTLHSSSNTAN*NETQSTGARLH Trigger: ATGTAGTCTGGCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | TTCCTTCGCCCCCTGCTTCTGTCTGCTTACTCTGAATaGCCTTTCAGCATGCCCCTGTTTAATGGTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: FLRPLLLSAYSE*PFSMPLFNGSS Trigger: AGATGAACCATTAAACAGGGGCATGCTGAAAGGTCATTCAGAGTAAGCAGACAGAAGCAGGGGGCGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCATGGACTGAGAAGCACAGACACTCCACAGTTCTTCAAACACCGCCAATACAAAACTGTTGAGTaGACAGGAAAGGCTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LSHGLRSTDTPQFFKHRQYKTVE*TGKAGA Trigger: AGCACCAGCCTTTCCTGTCAACTCAACAGTTTTGTA...TTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGCTTCTCAGTCCATGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CCA 72 bp | GGTCAGAATCCCAGACTGACCTTGTGCTCTGTAGGATaGCGAGGCCATTATCTAAGAAAGCATCATATAACC | + |
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Preference number: 3 (lower is better) Translates to: GQNPRLTLCSVG*RGHYLRKHHIT Trigger: GGTTATATGATGCTTTCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGATTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | GACACTCCACAGTTCTTCAAACACCGCCAACTGAAATaGAACACAGAGCACAGGAGCCAGACTACATTTTGT | + |
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Preference number: 3 (lower is better) Translates to: DTPQFFKHRQLK*NTEHRSQTTFC Trigger: ACAAAATGTAGTCTGGCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGAAGAACTGTGGAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR GCA 72 bp | TGCTTCTGTCTGCTTACTCTGAATGACCTTTCAGCATaGCCCTGTTTAATGGTTCATCTAATCCCCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CFCLLTLNDLSA*PCLMVHLIPSL Trigger: GAGAGAGGGGATTAGATGAACCATTAAACAGGGGCATGCTGAAAGGTCATTCAGAGTAAGCAGACAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGTTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTAAGGAAAGGCTGGTGCTaGCTGCTCTCTTGGATAGTA | + |
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Preference number: 3 (lower is better) Translates to: LEFISLPGFIALKTTDALRKGWC*LLSWIV Trigger: TACTATCCAAGAGAGCAGCAAGCACCAGCCTTTCCT...TAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CCA 72 bp | CATCCAAACCTGAGGAATGAATCTCACATGCTAGATTaGAAGGTTTACCCTCAACCTGAGGCCACTGAATAT | + |
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Preference number: 3 (lower is better) Translates to: HPNLRNESHMLD*KVYPQPEATEY Trigger: ATATTCAGTGGCCTCAGGTTGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | CAGAAAAACCAAGTAGGGACATCCAAACCTGAGGAATaGATCTCACATGCTAGATTGGAAGGTTTACCCTCA | + |
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Preference number: 3 (lower is better) Translates to: QKNQVGTSKPEE*ISHARLEGLPS Trigger: TGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGGATGTCCCTACTTGGTTTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CCA 72 bp | GAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTaGGACTTCCTTTTGTCTGTAGCATCCATGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: EDRAQSLQIILS*DFLLSVASMNH Trigger: ATGGTTCATGGATGCTACAGACAAAAGGAAGTCCCAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CAA 90 bp | CCAAACCTGAGGAATGAATCTCACATGCTAGATTGGAAGGTTTACCCTCAACCTAGGGTGAGAAACATTTaGATAGATACAGAAAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: PNLRNESHMLDWKVYPQPRVRNI*IDTERE Trigger: TTCCCTTTCTGTATCTATCAAAATGTTTCTCACCCT...AGGTTGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR-3UTR CAA 90 bp | TGGTTAACACTTGTGATGAACAGAGCCTTAACAGCTCTTTTCTCTGACTTTAGTGTGTGTTTTGAAGAATaGAACTGGAAGGTTGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: WLTLVMNRALTALFSDFSVCFEE*NWKVAG Trigger: TCCAGCAACCTTCCAGTTCAATTCTTCAAAACACAC...ACTAAAGTCAGAGAAAAGAGCTGTTAAGGCTCTGTTCATCACAAGTGTTAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR GCA 72 bp | CAGTGTTTTAGAGTTTATATCCCTCCCTGGGTTCATTaGCCTGAAAACAACAGATGCATTATATATGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QCFRVYIPPWVH*PENNRCIIYVR Trigger: CCTCACATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAAAACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | CATAAAAAGTCCATACAATATGATATACAAAACTGTTaGGTTGACAGGAAAGGCTGGTGCTTGCTGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HKKSIQYDIQNC*VDRKGWCLLLS Trigger: AGAGAGCAGCAAGCACCAGCCTTTCCTGTCAACTCAACAGTTTTGTATATCATATTGTATGGACTTTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CCA 72 bp | TGTATGTCACAGTGTTTTAGAGTTTATATCCCTCCCTaGGTTCATTGCCCTGAAAACAACAGATGCATTATA | + |
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Preference number: 3 (lower is better) Translates to: CMSQCFRVYIPP*VHCPENNRCII Trigger: TATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAAAACACTGTGACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR TCA 72 bp | TCTGACTTTAGTCAGATACTACTTAGAACATGTGTATaGGTACAGTTCAGGAAACTCCCAGGAAAGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: SDFSQILLRTCV*VQFRKLPGKFY Trigger: ATAAAACTTTCCTGGGAGTTTCCTGAACTGTACTCATACACATGTTCTAAGTAGTATCTGACTAAAGTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | CTCTCTCATGGACTGAGAAGCACAGACACTCCACAGTTCTTCAAACACCGCCAAACTCTGAGACGCGGTTaGGGCCTGTCAGGAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSHGLRSTDTPQFFKHRQTLRRG*GLSGRR Trigger: CCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGT...TTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGCTTCTCAGTCCATGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGAATGACCTTTCAGCATGCCCCTGTTTAATGGTTCATCTAATCCCCTCTCTGCGGTGCCCAGGATaGAGCCGGCGATCACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TLNDLSACPCLMVHLIPSLRCPG*SRRSRR Trigger: CCGACGTGATCGCCGGCTTCATCCTGGGCACCGCAG...AGAGGGGATTAGATGAACCATTAAACAGGGGCATGCTGAAAGGTCATTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | CCAGAGAATACCCTATACACCCTGGGCTATGGAAGCAGAGTCTGTGACCACAGACCTCGGGTTTGGGTTTaGAAGGAGAGCCTTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PENTLYTLGYGSRVCDHRPRVWV*KESLGF Trigger: GAACCCAAGGCTCTCCTTCCAAACCCAAACCCGAGG...TCTGTGGTCACAGACTCTGCTTCCATAGCCCAGGGTGTATAGGGTATTCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 72 bp | GTGTCACCTGCCCAAGGTCAGAATCCCAGACTGACCTaGTGCTCTGTAGGATGGCGAGGCCATTATCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSPAQGQNPRLT*CSVGWRGHYLR Trigger: TCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGATTCTGACCTTGGGCAGGTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | CCTGACAAGGGTGAGAAACATTTTGATAGATACAGAAAGGGAACTCCTTCTCCCCCCCAAGCACAGCACTaGCTTGGCCAGCCGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PDKGEKHFDRYRKGTPSPPQAQH*LGQPTA Trigger: AGCAGTCGGCTGGCCAAGCCAGTGCTGTGCTTGGGG...GGGAGAAGGAGTTCCCTTTCTGTATCTATCAAAATGTTTCTCACCCTTGTCAGG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | TCCCAGACTGACCTTGTGCTCTGTAGGATGGCGAGGCCATTATCTAAGAAAGCACCTTGGATATGCACCTaGAAGGTGTCAGTGCATTCG | + |
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Preference number: 4 (lower is better) Translates to: SQTDLVLCRMARPLSKKAPWICT*KVSVHS Trigger: CGAATGCACTGACACCTTTCAGGTGCATATCCAAGG...TGCTTTCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR GCA 90 bp | CCAAACCTGAGGAATGAATCTCACATGCTAGATTGGAAGGTTTACCCTCAACCTCAAAAACAGGGCCACTaGGGTGCCCAGGATGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PNLRNESHMLDWKVYPQPQKQGH*GAQDEA Trigger: GGCTTCATCCTGGGCACCGCAGTGGCCCTGTTTTTG...AGGTTGAGGGTAAACCTTCCAATCTAGCATGTGAGATTCATTCCTCAGGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | TTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTATATATGAGCACAGCACTGGCTTaGCCAGCCGACTGCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FISLPGFIALKTTDALYMSTALA*PADCSS Trigger: CGAAGAGCAGTCGGCTGGCCAAGCCAGTGCTGTGCT...CATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | TCCCAGACTGACCTTGTGCTCTGTAGGATGGCGAGGCCATTATCTAAGAAAGCAATTAAGTCTCCGTCCTaGCAGAAGAATCCTTGGATA | + |
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Preference number: 4 (lower is better) Translates to: SQTDLVLCRMARPLSKKAIKSPS*QKNPWI Trigger: TATCCAAGGATTCTTCTGTCAGGACGGAGACTTAAT...TGCTTTCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | ATGAACAGAGCCTTAACAGCTCTTTTCTCTGACTTTAGTCAGATACTACTTAGAGTGGTTCCGGTACTCTaGGACGCGGTTGAGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: MNRALTALFSDFSQILLRVVPVL*DAVEAC Trigger: ACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCAC...TCTAAGTAGTATCTGACTAAAGTCAGAGAAAAGAGCTGTTAAGGCTCTGTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | GAGGGTAGACTAACTCAGAGATCCAGGGAACAGAACAGAAAGAAATCCCTCAGTTTGTTGATGAACTGTTaGTGTGCCCGGCAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: EGRLTQRSREQNRKKSLSLLMNC*CARQSV Trigger: TACAGACTGCCGGGCACACCAACAGTTCATCAACAA...ACTGAGGGATTTCTTTCTGTTCTGTTCCCTGGATCTCTGAGTTAGTCTACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | CTTAGCATACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGTCAGAGCAGCATGTTTaGAGGGAAAGGACCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LSIQDRRQSSESTNHSFLSEQHV*RERTSE Trigger: CTCGGAGGTCCTTTCCCTCCAAACATGCTGCTCTGA...CAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTATGCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | TTAGAGTTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTAGGGGATCCTCGGGTTTaGGTTTGGAAGGAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LEFISLPGFIALKTTDALGDPRV*VWKESL Trigger: AAGGCTCTCCTTCCAAACCCAAACCCGAGGATCCCC...TAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAACTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR GCA 90 bp | AGAATGGGGCAGAGCTCGACCAAGATGTTGGAACTAGTGTATGTCACAGTGTTTATAAGGCGGAGTAAATaGTCAGAGCAGCATGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RMGQSSTKMLELVYVTVFIRRSK*SEQHVW Trigger: CCAAACATGCTGCTCTGAGCATTTACTCCGCCTTAT...AAACACTGTGACATACACTAGTTCCAACATCTTGGTCGAGCTCTGCCCCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 72 bp | AATCTAAGAACAGTTAAAAGCCCCATAGTGAAGCCGTaGCTCTGGGCTCTACATGTAGATGCTCTGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: NLRTVKSPIVKP*LWALHVDALIA Trigger: GGCTATCAGAGCATCTACATGTAGAGCCCAGAGCAACGGCTTCACTATGGGGCTTTTAACTGTTCTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR GCA 90 bp | CCTGACAAGGGTGAGAAACATTTTGATAGATACAGAAAGGGAACTCCTTCTCCCCCTGAAAGGTGTCAGTaGATTCGAAGTAGTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PDKGEKHFDRYRKGTPSPPERCQ*IRSSRQ Trigger: TTGCCTACTACTTCGAATGCACTGACACCTTTCAGG...GGGAGAAGGAGTTCCCTTTCTGTATCTATCAAAATGTTTCTCACCCTTGTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | ATGAACAGAGCCTTAACAGCTCTTTTCTCTGACTTTAGTCAGATACTACTTAGACGGGCTCTCTATCCTTaGGAAAGCCATCAGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: MNRALTALFSDFSQILLRRALYP*ESHQGN Trigger: GTTCCCCTGATGGCTTTCCCAAGGATAGAGAGCCCG...TCTAAGTAGTATCTGACTAAAGTCAGAGAAAAGAGCTGTTAAGGCTCTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CCA 90 bp | CTTAGCATACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGGAAAATAATAGCAGTTaGAGTGGCAGCCAGAACGCA | + |
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Preference number: 4 (lower is better) Translates to: LSIQDRRQSSESTNHSFLENNSS*SGSQNA Trigger: TGCGTTCTGGCTGCCACTCCAACTGCTATTATTTTC...CAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTATGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 72 bp | CAGAGTCTACAAATCATTCTTTCCTGGGACTTCCTTTaGTCTGTAGCATCCATGAACCATCTCAGTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: QSLQIILSWDFL*SVASMNHLSRH Trigger: GTGTCTACTGAGATGGTTCATGGATGCTACAGACAAAAGGAAGTCCCAGGAAAGAATGATTTGTAGACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR GCA 90 bp | ACTCTGAATGACCTTTCAGCATGCCCCTGTTTAATGGTTCATCTAATCCCCTCTAGCAAAAAGTCCAAATaGAAATACCCCGATGAACCT | + |
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Preference number: 4 (lower is better) Translates to: TLNDLSACPCLMVHLIPSSKKSK*KYPDEP Trigger: AGGTTCATCGGGGTATTTGCATTTGGACTTTTTGCT...AGAGGGGATTAGATGAACCATTAAACAGGGGCATGCTGAAAGGTCATTCAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | TTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTATATATGCAGGGACTCCCTTGTTaGCTTTATGAAATACATGGA | + |
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Preference number: 4 (lower is better) Translates to: FISLPGFIALKTTDALYMQGLPC*LYEIHG Trigger: TCCATGTATTTCATAAAGTCAACAAGGGAGTCCCTG...CATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR TCA 90 bp | TGGTTAACACTTGTGATGAACAGAGCCTTAACAGCTCTTTTCTCTGACTTTAGTGTTCCTCTGAAGTTATaGACCACACACATTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: WLTLVMNRALTALFSDFSVPLKL*TTHIPK Trigger: TTTGGGAATGTGTGTGGTTCATAACTTCAGAGGAAC...ACTAAAGTCAGAGAAAAGAGCTGTTAAGGCTCTGTTCATCACAAGTGTTAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 72 bp | AAAAGTCCATACAATATGATATACAAAACTGTTGAGTaGACAGGAAAGGCTGGTGCTTGCTGCTCTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPYNMIYKTVE*TGKAGACCSLG Trigger: TCCAAGAGAGCAGCAAGCACCAGCCTTTCCTGTCAACTCAACAGTTTTGTATATCATATTGTATGGACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| 3UTR CAA 72 bp | ATCTCAGTAGACACATCACACCAAGAAGGGCTAAACTaGATTCAGAGGCATCATGTAACAGAAATAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: ISVDTSHQEGLN*IQRHHVTEIEI Trigger: TATTTCTATTTCTGTTACATGATGCCTCTGAATCAAGTTTAGCCCTTCTTGGTGTGATGTGTCTACTGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CCA 90 bp | GCCACTGCGGTGCCCAGGATGAAGCCGGCGATCACGTCGGAACAGTaGTTCCGGTACTCTGAGACGCGGTTGAGGCCTGTCAGGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: ATAVPRMKPAITSEQ*FRYSETRLRPVRKA Trigger: CGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGGCTTCATCCTGGGCACCGCAGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 90 bp | CGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTGAGACGCGGTTaGGGCCTGTCAGGAAGGCGGTACAGAGGGTCCCCAAGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSRRNSGSGTLRRG*GLSGRRYRGSPSTA Trigger: TGCTGTGCTTGGGGACCCTCTGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 90 bp | CAGGATGAAGCCGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTaGGACGCGGTTGAGGCCTGTCAGGAAGGCGGTACAGAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDEAGDHVGTVVPVL*DAVEACQEGGTEGP Trigger: GGGACCCTCTGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGGCTTCATCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CCA 90 bp | GAGGCCTGTCAGGAAGGCGGTACAGAGGGTCCCCAAGCACAGCACTaGCTTGGCCAGCCGACTGCTCTTCGTCTTGATTGTGCTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EACQEGGTEGPQAQH*LGQPTALRLDCACD Trigger: ATCACAAGCACAATCAAGACGAAGAGCAGTCGGCTGGCCAAGCCAGTGCTGTGCTTGGGGACCCTCTGTACCGCCTTCCTGACAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 90 bp | GAACCACACACATTCCCAAAAACAGGGCCACTGCGGTGCCCAGGATaGAGCCGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPHTFPKTGPLRCPG*SRRSRRNSGSGTLR Trigger: TCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGGCTTCATCCTGGGCACCGCAGTGGCCCTGTTTTTGGGAATGTGTGTGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 90 bp | GGGGATCCTCGGGTTTGGGTTTGGAAGGAGAGCCTTGGGTTCCTCTaGAGTTATGAACCACACACATTCCCAAAAACAGGGCCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GDPRVWVWKESLGFL*SYEPHTFPKTGPLR Trigger: CCGCAGTGGCCCTGTTTTTGGGAATGTGTGTGGTTCATAACTTCAGAGGAACCCAAGGCTCTCCTTCCAAACCCAAACCCGAGGATCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | CTCTCTCATGGACTGAGAAGCACAGACACTCCACAGTTCTTCAAACACCGCCAAGCGGGCTCTCTATCCTaGGGAAAGCCATCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSHGLRSTDTPQFFKHRQAGSLS*GKPSGE Trigger: TTCCCCTGATGGCTTTCCCAAGGATAGAGAGCCCGC...TTGGCGGTGTTTGAAGAACTGTGGAGTGTCTGTGCTTCTCAGTCCATGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | AGAATGGGGCAGAGCTCGACCAAGATGTTGGAACTAGTGTATGTCACAGTGTTTAAGCACAGCACTGGCTaGGCCAGCCGACTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMGQSSTKMLELVYVTVFKHSTG*ASRLLF Trigger: GAAGAGCAGTCGGCTGGCCAAGCCAGTGCTGTGCTT...AAACACTGTGACATACACTAGTTCCAACATCTTGGTCGAGCTCTGCCCCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CCA 90 bp | ACATCGTGGCATATAAGGCGGAGTAAATGCTCAGAGCAGCATGTTTaGAGGGAAAGGACCTCCGAGCTTTTTCTATCACTTCCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSWHIRRSKCSEQHV*RERTSELFLSLPGP Trigger: GGGACCTGGAAGTGATAGAAAAAGCTCGGAGGTCCTTTCCCTCCAAACATGCTGCTCTGAGCATTTACTCCGCCTTATATGCCACGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | GAGGGTAGACTAACTCAGAGATCCAGGGAACAGAACAGAAAGAAATCCCTCAGTCTCAGAGCAGCATGTTaGGAGGGAAAGGACCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGRLTQRSREQNRKKSLSLRAAC*EGKDLR Trigger: TCGGAGGTCCTTTCCCTCCAAACATGCTGCTCTGAG...ACTGAGGGATTTCTTTCTGTTCTGTTCCCTGGATCTCTGAGTTAGTCTACCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | CTTAGCATACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGTACTCTGAGACGCGGTaGAGGCCTGTCAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSIQDRRQSSESTNHSFLYSETR*RPVRKA Trigger: CGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTA...CAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTATGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | GTTCTTCAAACACCGCCAACTGAAATGAAACACAGAGCACAGGAGCCAGACTACATTGTTGATGAACTGTaGGTGTGCCCGGCAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLQTPPTEMKHRAQEPDYIVDEL*VCPAVC Trigger: ACAGACTGCCGGGCACACCAACAGTTCATCAACAAT...GTAGTCTGGCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | TCCCAGACTGACCTTGTGCTCTGTAGGATGGCGAGGCCATTATCTAAGAAAGCACTGACAGAAGAATCCTaGGATATGCACCTGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQTDLVLCRMARPLSKKALTEES*DMHLKG Trigger: ACCTTTCAGGTGCATATCCAAGGATTCTTCTGTCAG...TGCTTTCTTAGATAATGGCCTCGCCATCCTACAGAGCACAAGGTCAGTCTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | GTTCTTCAAACACCGCCAACTGAAATGAAACACAGAGCACAGGAGCCAGACTACCAGATGTTGCCATTGTaGATGAACTGTTGGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLQTPPTEMKHRAQEPDYQMLPL*MNCWCA Trigger: GGCACACCAACAGTTCATCAACAATGGCAACATCTG...GTAGTCTGGCTCCTGTGCTCTGTGTTTCATTTCAGTTGGCGGTGTTTGAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | ACATCACACCAAGAAGGGCTAAACTTGATTCAGAGGCATCATGTAACAGAAATACGGGGATCCTCGGGTTaGGGTTTGGAAGGAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSHQEGLNLIQRHHVTEIRGSSG*GLEGEP Trigger: AGGCTCTCCTTCCAAACCCAAACCCGAGGATCCCCG...TATTTCTGTTACATGATGCCTCTGAATCAAGTTTAGCCCTTCTTGGTGTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | CTCAACCTGAGGCCACTGAATATCTTAAGGGTACGCAGAGGCTTTATTAAAGTGGTGACCAGTGACGACTaGCCCCGCGTTTACAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNLRPLNILRVRRGFIKVVTSDD*PRVYKN Trigger: ATTTTTGTAAACGCGGGGCAAGTCGTCACTGGTCAC...CACTTTAATAAAGCCTCTGCGTACCCTTAAGATATTCAGTGGCCTCAGGTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | AGAATGGGGCAGAGCTCGACCAAGATGTTGGAACTAGTGTATGTCACAGTGTTTGATGGAGTAACTGCGTaGAGTGTTGTTTTCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMGQSSTKMLELVYVTVFDGVTA*SVVFYS Trigger: GCTGTAGAAAACAACACTCAACGCAGTTACTCCATC...AAACACTGTGACATACACTAGTTCCAACATCTTGGTCGAGCTCTGCCCCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | AGAATGGGGCAGAGCTCGACCAAGATGTTGGAACTAGTGTATGTCACAGTGTTTGTGCAGATGTTGCCATaGTTGATGAACTGTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RMGQSSTKMLELVYVTVFVQMLP*LMNCWC Trigger: ACACCAACAGTTCATCAACAATGGCAACATCTGCAC...AAACACTGTGACATACACTAGTTCCAACATCTTGGTCGAGCTCTGCCCCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | CCTGACAAGGGTGAGAAACATTTTGATAGATACAGAAAGGGAACTCCTTCTCCCCGACTGCTCTTCGTCTaGATTGTGCTTGTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PDKGEKHFDRYRKGTPSPRLLFV*IVLVMY Trigger: GTACATCACAAGCACAATCAAGACGAAGAGCAGTCG...GGGAGAAGGAGTTCCCTTTCTGTATCTATCAAAATGTTTCTCACCCTTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | TTTATATCCCTCCCTGGGTTCATTGCCCTGAAAACAACAGATGCATTATATATGTCCTCGGGTTTGGGTTaGGAAGGAGAGCCTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FISLPGFIALKTTDALYMSSGLG*EGEPWV Trigger: AACCCAAGGCTCTCCTTCCAAACCCAAACCCGAGGA...CATATATAATGCATCTGTTGTTTTCAGGGCAATGAACCCAGGGAGGGATATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS-3UTR CAA 90 bp | CTTAGCATACAGGACAGAAGACAGAGCTCAGAGTCTACAAATCATTCTTTCCTGTCCCCAGTGCAGATGTaGCCATTGTTGATGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIQDRRQSSESTNHSFLSPVQM*PLLMNC Trigger: ACAGTTCATCAACAATGGCAACATCTGCACTGGGGA...CAGGAAAGAATGATTTGTAGACTCTGAGCTCTGTCTTCTGTCCTGTATGCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 90 bp | CCCTGTCAGGATCATTTTCTCCTCAGCAATCAGGGACTCCCTTGTTaGCTTTATGAAATACATGGATATTTCACCAATGAAAATAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCQDHFLLSNQGLPC*LYEIHGYFTNENNS Trigger: GCTATTATTTTCATTGGTGAAATATCCATGTATTTCATAAAGTCAACAAGGGAGTCCCTGATTGCTGAGGAGAAAATGATCCTGACAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 90 bp | CCGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTGAGACGCGGTaGAGGCCTGTCAGGAAGGCGGTACAGAGGGTCCCCAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PAITSEQWFRYSETR*RPVRKAVQRVPKHS Trigger: GCTGTGCTTGGGGACCCTCTGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 72 bp | CGTCGGAACAGTGGTTCCGGTACTCTGAGACGCGGTTaGGGCCTGTCAGGAAGGCGGTACAGAGGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRNSGSGTLRRG*GLSGRRYRGSP Trigger: TGGGGACCCTCTGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 72 bp | GCCGGCGATCACGTCGGAACAGTGGTTCCGGTACTCTaGGACGCGGTTGAGGCCTGTCAGGAAGGCGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: AGDHVGTVVPVL*DAVEACQEGGT Trigger: TGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CCA 72 bp | GTGCCCAGGATGAAGCCGGCGATCACGTCGGAACAGTaGTTCCGGTACTCTGAGACGCGGTTGAGGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPRMKPAITSEQ*FRYSETRLRPV Trigger: GACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGTGATCGCCGGCTTCATCCTGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 72 bp | ACGTCGGAACAGTGGTTCCGGTACTCTGAGACGCGGTaGAGGCCTGTCAGGAAGGCGGTACAGAGGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSEQWFRYSETR*RPVRKAVQRVP Trigger: GGGGACCCTCTGTACCGCCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCCGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 72 bp | ACATTCCCAAAAACAGGGCCACTGCGGTGCCCAGGATaGAGCCGGCGATCACGTCGGAACAGTGGTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFPKTGPLRCPG*SRRSRRNSGSG Trigger: ACCGGAACCACTGTTCCGACGTGATCGCCGGCTTCATCCTGGGCACCGCAGTGGCCCTGTTTTTGGGAATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CCA 72 bp | CAGGAAGGCGGTACAGAGGGTCCCCAAGCACAGCACTaGCTTGGCCAGCCGACTGCTCTTCGTCTTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: QEGGTEGPQAQH*LGQPTALRLDC Trigger: ACAATCAAGACGAAGAGCAGTCGGCTGGCCAAGCCAGTGCTGTGCTTGGGGACCCTCTGTACCGCCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 90 bp | CGGAGTGATTCTGTGCACTTAAGGTTTCCAGCGGGCTCTCTATCCTaGGGAAAGCCATCAGGGGAACTCCGCGGGGATCCTCGGGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSDSVHLRFPAGSLS*GKPSGELRGDPRVW Trigger: CCAAACCCGAGGATCCCCGCGGAGTTCCCCTGATGGCTTTCCCAAGGATAGAGAGCCCGCTGGAAACCTTAAGTGCACAGAATCACTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 72 bp | AAAGCCATCAGGGGAACTCCGCGGGGATCCTCGGGTTaGGGTTTGGAAGGAGAGCCTTGGGTTCCTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KAIRGTPRGSSG*GLEGEPWVPLK Trigger: CTTCAGAGGAACCCAAGGCTCTCCTTCCAAACCCAAACCCGAGGATCCCCGCGGAGTTCCCCTGATGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 72 bp | TCTGTGCACTTAAGGTTTCCAGCGGGCTCTCTATCCTaGGGAAAGCCATCAGGGGAACTCCGCGGGGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVHLRFPAGSLS*GKPSGELRGDP Trigger: AGGATCCCCGCGGAGTTCCCCTGATGGCTTTCCCAAGGATAGAGAGCCCGCTGGAAACCTTAAGTGCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS CAA 72 bp | ACTGTTGGTGTGCCCGGCAGTCTGTACTGGTATAGTTaGGCTGGCACACTGTCAGGAAGTATGGTGTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TVGVPGSLYWYS*AGTLSGSMVLG Trigger: ACCTAACACCATACTTCCTGACAGTGTGCCAGCCAAACTATACCAGTACAGACTGCCGGGCACACCAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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| CDS TCA 72 bp | GATCATTTTCTCCTCAGCAATCAGGGACTCCCTTGTTaGCTTTATGAAATACATGGATATTTCACCAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: DHFLLSNQGLPC*LYEIHGYFTNE Trigger: TTCATTGGTGAAATATCCATGTATTTCATAAAGTCAACAAGGGAGTCCCTGATTGCTGAGGAGAAAATGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076670.3 |
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