Pregenerated sensors for PLPP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040105Ensembl transcript IDs: ENSMUST00000045674.4
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGTGTACCAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACTaGGAACTGGTTTATCATGTCCATCTTCCACAGTCCTGTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: WVYQTPTLEGPTSSY*ELVYHVHLPQSCPP Trigger: GGGTGGACAGGACTGTGGAAGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGTACACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 90 bp | GAGGGGCAACTAGATGGCTCTGGCTTAGGTCAGCATCCTCGAGTGTaGAATCCTTCAGACCTCAAGGTGTCAATAATCAATGAGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: EGQLDGSGLGQHPRV*NPSDLKVSIINEMV Trigger: CACCATCTCATTGATTATTGACACCTTGAGGTCTGAAGGATTCCACACTCGAGGATGCTGACCTAAGCCAGAGCCATCTAGTTGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 90 bp | ACCAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTaGTTTATCATGTCCATCTTCCACAGTCCTGTCCACCCATATCTT | + |
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Preference number: 1 (lower is better) Translates to: TRLPLSKVLLPPTEN*FIMSIFHSPVHPYL Trigger: AAGATATGGGTGGACAGGACTGTGGAAGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 90 bp | AGAAATTTAAACACACCTAGACCTCTTAGAACCTCACAGCTTAGCTaGTCTGATGAGGGGAGAGGTAGTCTGTGTTTAGGTTGTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RNLNTPRPLRTSQLS*SDEGRGSLCLGCCG Trigger: CCCACAACAACCTAAACACAGACTACCTCTCCCCTCATCAGATCAGCTAAGCTGTGAGGTTCTAAGAGGTCTAGGTGTGTTTAAATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 90 bp | TGGTTTATCATGTCCATCTTCCACAGTCCTGTCCACCCATATCTTTaGACATTAGACCATAGCCCACAGCTCACAGTCCTTTCTATTTAT | + |
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Preference number: 1 (lower is better) Translates to: WFIMSIFHSPVHPYL*TLDHSPQLTVLSIY Trigger: ATAAATAGAAAGGACTGTGAGCTGTGGGCTATGGTCTAATGTTCAAAGATATGGGTGGACAGGACTGTGGAAGATGGACATGATAAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 90 bp | AGCCCACAGCTCACAGTCCTTTCTATTTATAAATGCCAGAACAAGTaGCCATTGAGATTATCTGATGATGCCACTTTCACCAGTGATTTA | + |
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Preference number: 1 (lower is better) Translates to: SPQLTVLSIYKCQNK*PLRLSDDATFTSDL Trigger: TAAATCACTGGTGAAAGTGGCATCATCAGATAATCTCAATGGCCACTTGTTCTGGCATTTATAAATAGAAAGGACTGTGAGCTGTGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 90 bp | GGTCTAGGAACCTGTCAAGACAGTGGGATCCCAGAATTCCCAAAGTaGCCCAGAGGGGCAACTAGATGGCTCTGGCTTAGGTCAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLGTCQDSGIPEFPK*PRGATRWLWLRSAS Trigger: GGATGCTGACCTAAGCCAGAGCCATCTAGTTGCCCCTCTGGGCAACTTTGGGAATTCTGGGATCCCACTGTCTTGACAGGTTCCTAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAGTATGGCCGTGTTCAGTAATAGCCAGCATGCGCTCCGGTCTAGGAACCCAGAATTCCCAAAGTTaGCCAGAGGGGCAACTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SQVWPCSVIASMRSGLGTQNSQS*PEGQLD Trigger: ATCTAGTTGCCCCTCTGGGCAACTTTGGGAATTCTG...GGTTCCTAGACCGGAGCGCATGCTGGCTATTACTGAACACGGCCATACTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCTCAGCTTCTTGCCCCCTGGTATGCTACTTGTCCATGGGACTAGGAAACCCAAGTCCACAAGGGTaGGAGAGCTTAAAGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: SSSASCPLVCYLSMGLGNPSPQG*ESLKES Trigger: TGATTCCTTTAAGCTCTCCCACCCTTGTGGACTTGG...GTTTCCTAGTCCCATGGACAAGTAGCATACCAGGGGGCAAGAAGCTGAGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCCAATGGGTGTACCAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACTATCTAAAGATCGTTTaGGAGGTACTGGGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LFQWVYQTPTLEGPTSSYYLKIV*EVLGAE Trigger: TTCTGCTCCCAGTACCTCTCAAACGATCTTTAGATA...GTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGTACACCCATTGGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR TCA 90 bp | AGCATACCCCTCTTTGGTCTTTCTAGGTCAGACTGTAATCAGAGTCTACCATATTTACCTAAAATGTGCTaGACACAGCACAGTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: SIPLFGLSRSDCNQSLPYLPKMC*TQHSGT Trigger: GGTCCCACTGTGCTGTGTTCAGCACATTTTAGGTAA...ATATGGTAGACTCTGATTACAGTCTGACCTAGAAAGACCAAAGAGGGGTATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGAGAGCTTAAAGGAATCAGAAGAAGGAAAAAGCTCCAATTATGGCAACAACCTGTCAAGACAGTaGGATCCCAGAATTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GWESLKESEEGKSSNYGNNLSRQ*DPRIPK Trigger: TTTGGGAATTCTGGGATCCCACTGTCTTGACAGGTT...GTTGCCATAATTGGAGCTTTTTCCTTCTTCTGATTCCTTTAAGCTCTCCCACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGTGGGAATGTGATAACTGTTTTATTTATCGAAGGACTTGTTCCAATGGGAGAGGGGCAACTAGATaGCTCTGGCTTAGGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLWECDNCFIYRRTCSNGRGATR*LWLRSA Trigger: TGCTGACCTAAGCCAGAGCCATCTAGTTGCCCCTCT...CCCATTGGAACAAGTCCTTCGATAAATAAAACAGTTATCACATTCCCACAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCTCGTTTGAGAGGTACTaGGAGCAGAAAGGAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: CYLSMGLGNKTVGSYLHFSFERY*EQKGKY Trigger: GTATTTTCCTTTCTGCTCCCAGTACCTCTCAAACGA...GAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCTACAGTCAGCCAGCTTaGTTTCTTTACAGTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: CYLSMGLGNKTVGSYLHFYSQPA*FLYSCL Trigger: AAGACAACTGTAAAGAAATCAAGCTGGCTGACTGTA...GAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 90 bp | CAGCTCACAGTCCTTTCTATTTATAAATGCCAGAACAAGTGGCCATaGAGATTATCTGATGATGCCACTTTCACCAGTGATTTAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: QLTVLSIYKCQNKWP*RLSDDATFTSDLKT Trigger: AGTCTTTAAATCACTGGTGAAAGTGGCATCATCAGATAATCTCAATGGCCACTTGTTCTGGCATTTATAAATAGAAAGGACTGTGAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGTGGGAATGTGATAACTGTTTTATTTATCGAAGGACTTGTTCCAATGGGCCTCCTACTGAGAACTaGTTTATCATGTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLWECDNCFIYRRTCSNGPPTEN*FIMSIF Trigger: GAAGATGGACATGATAAACCAGTTCTCAGTAGGAGG...CCCATTGGAACAAGTCCTTCGATAAATAAAACAGTTATCACATTCCCACAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 90 bp | AATAGCAATCATACAGTCAGCCAGCTTGATTTCTTTACAGTTGTCTaGGTGATAAATAGCTGTCAAATACACAGTAGACTTTGTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: NSNHTVSQLDFFTVV*VINSCQIHSRLCFS Trigger: TGAGAAACAAAGTCTACTGTGTATTTGACAGCTATTTATCACCAAGACAACTGTAAAGAAATCAAGCTGGCTGACTGTATGATTGCTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR GCA 72 bp | TTTAGTAGAGGTGACCGACAGCAGGGCTTCATTTCCTaGCCCTGGCCATGGCCTACTTCCCGGTCTGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FSRGDRQQGFIS*PWPWPTSRSAS Trigger: GGAGGCAGACCGGGAAGTAGGCCATGGCCAGGGGCAGGAAATGAAGCCCTGCTGTCGGTCACCTCTACTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 72 bp | CAGCATGCGCTCCGGTCTAGGAACCTGTCAAGACAGTaGGATCCCAGAATTCCCAAAGTTGCCCAGAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: QHALRSRNLSRQ*DPRIPKVAQRG Trigger: GCCCCTCTGGGCAACTTTGGGAATTCTGGGATCCCACTGTCTTGACAGGTTCCTAGACCGGAGCGCATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR GCA 72 bp | CCTGTCAAGACAGTGGGATCCCAGAATTCCCAAAGTTaGCCAGAGGGGCAACTAGATGGCTCTGGCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: PVKTVGSQNSQS*PEGQLDGSGLG Trigger: ACCTAAGCCAGAGCCATCTAGTTGCCCCTCTGGGCAACTTTGGGAATTCTGGGATCCCACTGTCTTGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 72 bp | TTCCCAAAGTTGCCCAGAGGGGCAACTAGATGGCTCTaGCTTAGGTCAGCATCCTCGAGTGTGGAATCCTTC | + |
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Preference number: 3 (lower is better) Translates to: FPKLPRGATRWL*LRSASSSVESF Trigger: GAAGGATTCCACACTCGAGGATGCTGACCTAAGCCAGAGCCATCTAGTTGCCCCTCTGGGCAACTTTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCTCAGCTTCTTGCCCCCTGGTATGCTACTTGTCCATGGGACTAGGAAACCCAGAATTCCCAAAGTaGCCCAGAGGGGCAACTAGA | + |
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Preference number: 3 (lower is better) Translates to: SSSASCPLVCYLSMGLGNPEFPK*PRGATR Trigger: TCTAGTTGCCCCTCTGGGCAACTTTGGGAATTCTGG...GTTTCCTAGTCCCATGGACAAGTAGCATACCAGGGGGCAAGAAGCTGAGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CAA 90 bp | CACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTGGTTTATCATGTCCATCTCAGCAGCTCAGCTTCTaGCCCCCTGGTATGCTACTT | + |
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Preference number: 3 (lower is better) Translates to: HSRRSYFLLLRTGLSCPSQQLSF*PPGMLL Trigger: AAGTAGCATACCAGGGGGCAAGAAGCTGAGCTGCTG...AGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 72 bp | CAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACTaGGAACTGGTTTATCATGTCCATCTTCCACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: QTPTLEGPTSSY*ELVYHVHLPQS Trigger: GGACTGTGGAAGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 72 bp | CCACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTaGTTTATCATGTCCATCTTCCACAGTCCTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: PLSKVLLPPTEN*FIMSIFHSPVH Trigger: GTGGACAGGACTGTGGAAGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 72 bp | ATGTCCATCTTCCACAGTCCTGTCCACCCATATCTTTaGACATTAGACCATAGCCCACAGCTCACAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: MSIFHSPVHPYL*TLDHSPQLTVL Trigger: AAGGACTGTGAGCTGTGGGCTATGGTCTAATGTTCAAAGATATGGGTGGACAGGACTGTGGAAGATGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 72 bp | CTAGATGGCTCTGGCTTAGGTCAGCATCCTCGAGTGTaGAATCCTTCAGACCTCAAGGTGTCAATAATCAAT | + |
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Preference number: 3 (lower is better) Translates to: LDGSGLGQHPRV*NPSDLKVSIIN Trigger: ATTGATTATTGACACCTTGAGGTCTGAAGGATTCCACACTCGAGGATGCTGACCTAAGCCAGAGCCATCTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CCA 72 bp | TTGAGAGGTACTGGGAGCAGAAAGGAAAATACTCTGTaGAACCTCTTAACTACCAAGTCCACAAGGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LRGTGSRKENTL*NLLTTKSTRVG Trigger: TCCCACCCTTGTGGACTTGGTAGTTAAGAGGTTCCACAGAGTATTTTCCTTTCTGCTCCCAGTACCTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 72 bp | CTTTCTTTCCAGACACAGCAGCATTTACAGATGTCATaGGCATACCCCTCTTTGGTCTTTCTAGGTCAGACT | + |
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Preference number: 3 (lower is better) Translates to: LSFQTQQHLQMS*AYPSLVFLGQT Trigger: AGTCTGACCTAGAAAGACCAAAGAGGGGTATGCTCATGACATCTGTAAATGCTGCTGTGTCTGGAAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CAA 90 bp | CACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTGGTTTATCATGTCCATCTAGACAAGCCCACCTTTaGAATATGTCTTCTTCCATA | + |
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Preference number: 3 (lower is better) Translates to: HSRRSYFLLLRTGLSCPSRQAHL*NMSSSI Trigger: TATGGAAGAAGACATATTCAAAAGGTGGGCTTGTCT...AGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR-3UTR CAA 90 bp | TGCTACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCATACAGTCAGCCAGCTaGATTTCTTTACAGTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: CYLSMGLGNKTVGSYLHFIQSAS*ISLQLS Trigger: AGACAACTGTAAAGAAATCAAGCTGGCTGACTGTAT...GAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 72 bp | CTCTTCTACTTTTTACTTAATAGAGGACCATTTGCTTaGTTTAGTAGAGGTGACCGACAGCAGGGCTTCATT | + |
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Preference number: 3 (lower is better) Translates to: LFYFLLNRGPFA*FSRGDRQQGFI Trigger: AATGAAGCCCTGCTGTCGGTCACCTCTACTAAATCAAGCAAATGGTCCTCTATTAAGTAAAAAGTAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR TCA 72 bp | TACATTTCTGTGGGAACCTTAGACAAGCCCACCTTTTaGATATGTCTTCTTCCATATCTTGGTTTGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: YISVGTLDKPTF*ICLLPYLGLFY Trigger: ATAGAACAAACCAAGATATGGAAGAAGACATATTCAAAAGGTGGGCTTGTCTAAGGTTCCCACAGAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | GGGGCAACTAGATGGCTCTGGCTTAGGTCAGCATCCTCGAGTGTGGAATCCTTCGGGAGCGCAGGGCGATaGCCAGGAAGGACGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GATRWLWLRSASSSVESFGSAGR*PGRTGS Trigger: TGAACCCGTCCTTCCTGGGCATCGCCCTGCGCTCCC...GAAGGATTCCACACTCGAGGATGCTGACCTAAGCCAGAGCCATCTAGTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | TTGTTCCAATGGGTGTACCAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACACAGCCACAGGTCGATaGCCAGCAGGGAGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LFQWVYQTPTLEGPTSSYTATGR*PAGSAG Trigger: CCCTGCGCTCCCTGCTGGCCATCGACCTGTGGCTGT...GTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGTACACCCATTGGAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | TCTCAAGTATGGCCGTGTTCAGTAATAGCCAGCATGCGCTCCGGTCTAGGAACCACACCCCCAGCTTCTTaGACAGCCACAGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: SQVWPCSVIASMRSGLGTTPPAS*TATGRW Trigger: CCATCGACCTGTGGCTGTCCAAGAAGCTGGGGGTGT...GGTTCCTAGACCGGAGCGCATGCTGGCTATTACTGAACACGGCCATACTTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | AGCAGCTCAGCTTCTTGCCCCCTGGTATGCTACTTGTCCATGGGACTAGGAAACACATCAGTGACGTTGTaGCGCCCGAGCATGACCCTA | + |
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Preference number: 4 (lower is better) Translates to: SSSASCPLVCYLSMGLGNTSVTL*RPSMTL Trigger: TAGGGTCATGCTCGGGCGGCACAACGTCACTGATGT...GTTTCCTAGTCCCATGGACAAGTAGCATACCAGGGGGCAAGAAGCTGAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | TGCTACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCGCGGCCGTCCCTCGATaGTCCTCCGGGGGCTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CYLSMGLGNKTVGSYLHFAAVPR*SSGGSA Trigger: TGCCGAGCCCCCGGAGGACCATCGAGGGACGGCCGC...GAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | TGGCCGTGTTCAGTAATAGCCAGCATGCGCTCCGGTCTAGGAACCTGTCAAGACGCACCCTCAGTGGAATaGCCAGTACCAGGTGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: WPCSVIASMRSGLGTCQDAPSVE*PVPGGL Trigger: TAAACCACCTGGTACTGGCCATTCCACTGAGGGTGC...GTCTTGACAGGTTCCTAGACCGGAGCGCATGCTGGCTATTACTGAACACGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 72 bp | ACCTGTCAAGACAGTGGGATCCCAGAATTCCCAAAGTaGCCCAGAGGGGCAACTAGATGGCTCTGGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: TCQDSGIPEFPK*PRGATRWLWLR Trigger: CCTAAGCCAGAGCCATCTAGTTGCCCCTCTGGGCAACTTTGGGAATTCTGGGATCCCACTGTCTTGACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR TCA 90 bp | GGGGCAACTAGATGGCTCTGGCTTAGGTCAGCATCCTCGAGTGTGGAATCCTTCTGGAACATTGTGGGGTaGCAGCCAGCAATAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GATRWLWLRSASSSVESFWNIVG*QPAIIH Trigger: GTGGATTATTGCTGGCTGTCACCCCACAATGTTCCA...GAAGGATTCCACACTCGAGGATGCTGACCTAAGCCAGAGCCATCTAGTTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | TACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCTGTCCAGGGCGGCCCTCGTaGCGTGGCCCGAGGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLSMGLGNKTVGSYLHFCPGRPS*RGPRER Trigger: CCTTTCCCTCGGGCCACGCCACGAGGGCCGCCCTGG...ACAGAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 72 bp | CCCAGCAGCTCAGCTTCTTGCCCCCTGGTATGCTACTaGTCCATGGGACTAGGAAACAAAACAGTAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PSSSASCPLVCY*SMGLGNKTVGS Trigger: TGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCATACCAGGGGGCAAGAAGCTGAGCTGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | TGCTACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCATTGGAACTCGAACCTaGCGCCGCCGCTGCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: CYLSMGLGNKTVGSYLHFIGTRT*RRRCHR Trigger: GCGGTGGCAGCGGCGGCGGCAGGTTCGAGTTCCAAT...GAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | AAAGGAAAATACTCTGTGGAACCTCTTAACTACCAAGTCCACAAGGGTGGGAGACCAGCAGCCAGGGGATaGCATGCCCTGAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGKYSVEPLNYQVHKGGRPAARG*HALRSP Trigger: TGGAGATCTCAGGGCATGGCATCCCCTGGCTGCTGG...TCTCCCACCCTTGTGGACTTGGTAGTTAAGAGGTTCCACAGAGTATTTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR TCA 90 bp | TTGTTCCAATGGGTGTACCAGACTCCCACTCTCGAAGGTCCTACTTCCTCCTACTGTCCACCGAGAGGGTaGAAAACATGTCCTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LFQWVYQTPTLEGPTSSYCPPRG*KTCPFD Trigger: ATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACA...GTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGTACACCCATTGGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | TACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCTGTAGCCAGGGGATGCCATaGCCTGAGATCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YLSMGLGNKTVGSYLHFCSQGMP*PEISSS Trigger: GCTGCTGGAGATCTCAGGGCATGGCATCCCCTGGCT...ACAGAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CCA 90 bp | GCAATAGGCTCTCCTGAAAAGTTTCAAGTTGTGTCCTGTTACCTAAAATGTGCTCACCAGCACCCTCAGTaGAATGGCCAGTACCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: AIGSPEKFQVVSCYLKCAHQHPQ*NGQYQV Trigger: CACCTGGTACTGGCCATTCCACTGAGGGTGCTGGTG...AGCACATTTTAGGTAACAGGACACAACTTGAAACTTTTCAGGAGAGCCTATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR TCA 90 bp | TACTTGTCCATGGGACTAGGAAACAAAACAGTAGGCTCATACTTACATTTCTGTGGGGATGCCATGCCCTaGGATCTCCAGCAGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: YLSMGLGNKTVGSYLHFCGDAMP*DLQQLH Trigger: ATGAAGCTGCTGGAGATCTCAGGGCATGGCATCCCC...ACAGAAATGTAAGTATGAGCCTACTGTTTTGTTTCCTAGTCCCATGGACAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR GCA 90 bp | AAAGGAAAATACTCTGTGGAACCTCTTAACTACCAAGTCCACAAGGGTGGGAGAAGCAATAATCCACAATaGTGTACTGCATGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KGKYSVEPLNYQVHKGGRSNNPQ*CTACSP Trigger: TGGGCTACATGCAGTACAGCATTGTGGATTATTGCT...TCTCCCACCCTTGTGGACTTGGTAGTTAAGAGGTTCCACAGAGTATTTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 72 bp | CATTGCTCTTCTACTTTTTACTTAATAGAGGACCATTaGCTTGATTTAGTAGAGGTGACCGACAGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HCSSTFYLIEDH*LDLVEVTDSRA Trigger: AGCCCTGCTGTCGGTCACCTCTACTAAATCAAGCAAATGGTCCTCTATTAAGTAAAAAGTAGAAGAGCAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| 3UTR CAA 72 bp | CATACAGTCAGCCAGCTTGATTTCTTTACAGTTGTCTaGGTGATAAATAGCTGTCAAATACACAGTAGACTT | + |
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Preference number: 4 (lower is better) Translates to: HTVSQLDFFTVV*VINSCQIHSRL Trigger: AAGTCTACTGTGTATTTGACAGCTATTTATCACCAAGACAACTGTAAAGAAATCAAGCTGGCTGACTGTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CCA 90 bp | GCCCACAGGACCACCAGCACCCTCAGTGGAATGGCCAGTACCAGGTaGTTTAGGATAAACCGCGACACCAGGGCGGCCCTCGTGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: AHRTTSTLSGMASTR*FRINRDTRAALVAW Trigger: CCACGCCACGAGGGCCGCCCTGGTGTCGCGGTTTATCCTAAACCACCTGGTACTGGCCATTCCACTGAGGGTGCTGGTGGTCCTGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 90 bp | TCGTGGCGTGGCCCGAGGGAAAGGAGTACCTGTCCACCGAGAGGGTaGAAAACATGTCCTTTTGATTGTGCGCGGGTCGGCGCCTGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SWRGPRERSTCPPRG*KTCPFDCARVGACG Trigger: TCCGCAGGCGCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCCCTCGGGCCACGCCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CCA 90 bp | AGGTGGTTTAGGATAAACCGCGACACCAGGGCGGCCCTCGTGGCGTaGCCCGAGGGAAAGGAGTACCTGTCCACCGAGAGGGTGAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: RWFRINRDTRAALVA*PEGKEYLSTERVKN Trigger: GTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCCCTCGGGCCACGCCACGAGGGCCGCCCTGGTGTCGCGGTTTATCCTAAACCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 90 bp | GGAAAGGAGTACCTGTCCACCGAGAGGGTGAAAAACATGTCCTTTTaGTTGTGCGCGGGTCGGCGCCTGCGGACCAGCCCTTTAATCACA | + |
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Preference number: 5 (lower is better) Translates to: GKEYLSTERVKNMSF*LCAGRRLRTSPLIT Trigger: TGTGATTAAAGGGCTGGTCCGCAGGCGCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CAA 90 bp | CACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTGGTTTATCATGTCCATCTCACACCCCCAGCTTCTaGGACAGCCACAGGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: HSRRSYFLLLRTGLSCPSHTPSF*DSHRSM Trigger: CATCGACCTGTGGCTGTCCAAGAAGCTGGGGGTGTG...AGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CAA 90 bp | TGGCCGTGTTCAGTAATAGCCAGCATGCGCTCCGGTCTAGGAACCTGTCAAGACAAAAGAACTGGAACATaGTGGGGTGACAGCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: WPCSVIASMRSGLGTCQDKRTGT*WGDSQQ Trigger: TTGCTGGCTGTCACCCCACAATGTTCCAGTTCTTTT...GTCTTGACAGGTTCCTAGACCGGAGCGCATGCTGGCTATTACTGAACACGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS-3UTR CAA 90 bp | CACTCTCGAAGGTCCTACTTCCTCCTACTGAGAACTGGTTTATCATGTCCATCTGAAAAACATGTCCTTTaGATTGTGCGCGGGTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: HSRRSYFLLLRTGLSCPSEKHVL*IVRGSA Trigger: CGCCGACCCGCGCACAATCAAAAGGACATGTTTTTC...AGATGGACATGATAAACCAGTTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 90 bp | TCACTGTTGATTCCACAGTACAAAAAGAACTGGAACATTGTGGGGTaGCAGCCAGCAATAATCCACAATGCTGTACTGCATGTAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLLIPQYKKNWNIVG*QPAIIHNAVLHVAQ Trigger: CTGGGCTACATGCAGTACAGCATTGTGGATTATTGCTGGCTGTCACCCCACAATGTTCCAGTTCTTTTTGTACTGTGGAATCAACAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CCA 72 bp | GCGGGGTCCGCGCCCGCGCGGCAGTTCAGCAGCGATTaGAACTCGAACCTGCCGCCGCCGCTGCCACCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AGSAPARQFSSD*NSNLPPPLPPP Trigger: CGGCGGTGGCAGCGGCGGCGGCAGGTTCGAGTTCCAATCGCTGCTGAACTGCCGCGCGGGCGCGGACCCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CAA 72 bp | GGCGGGGTCCGCGCCCGCGCGGCAGTTCAGCAGCGATaGGAACTCGAACCTGCCGCCGCCGCTGCCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: GGVRARAAVQQR*ELEPAAAAATA Trigger: GGCGGTGGCAGCGGCGGCGGCAGGTTCGAGTTCCAATCGCTGCTGAACTGCCGCGCGGGCGCGGACCCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CCA 72 bp | AGGATAAACCGCGACACCAGGGCGGCCCTCGTGGCGTaGCCCGAGGGAAAGGAGTACCTGTCCACCGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RINRDTRAALVA*PEGKEYLSTER Trigger: CCTCTCGGTGGACAGGTACTCCTTTCCCTCGGGCCACGCCACGAGGGCCGCCCTGGTGTCGCGGTTTATCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 72 bp | GTAGAGGGTGCCCAGCAGCCAGGGGATGCCATGCCCTaGGATCTCCAGCAGCTTCATCAGGGGCCGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: VEGAQQPGDAMP*DLQQLHQGPHA Trigger: AGCGTGCGGCCCCTGATGAAGCTGCTGGAGATCTCAGGGCATGGCATCCCCTGGCTGCTGGGCACCCTCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CCA 72 bp | ACCACCAGCACCCTCAGTGGAATGGCCAGTACCAGGTaGTTTAGGATAAACCGCGACACCAGGGCGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TTSTLSGMASTR*FRINRDTRAAL Trigger: GAGGGCCGCCCTGGTGTCGCGGTTTATCCTAAACCACCTGGTACTGGCCATTCCACTGAGGGTGCTGGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CAA 72 bp | GTACCTGTCCACCGAGAGGGTGAAAAACATGTCCTTTaGATTGTGCGCGGGTCGGCGCCTGCGGACCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VPVHREGEKHVL*IVRGSAPADQP Trigger: GGGCTGGTCCGCAGGCGCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 72 bp | TACCTGTCCACCGAGAGGGTGAAAAACATGTCCTTTTaGTTGTGCGCGGGTCGGCGCCTGCGGACCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: YLSTERVKNMSF*LCAGRRLRTSP Trigger: AGGGCTGGTCCGCAGGCGCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 72 bp | GGCCCGAGGGAAAGGAGTACCTGTCCACCGAGAGGGTaGAAAACATGTCCTTTTGATTGTGCGCGGGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GPRERSTCPPRG*KTCPFDCARVG Trigger: GCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCCCTCGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS CAA 90 bp | GGGAAAGGAGTACCTGTCCACCGAGAGGGTGAAAAACATGTCCTTTaGATTGTGCGCGGGTCGGCGCCTGCGGACCAGCCCTTTAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GKGVPVHREGEKHVL*IVRGSAPADQPFNH Trigger: GTGATTAAAGGGCTGGTCCGCAGGCGCCGACCCGCGCACAATCAAAAGGACATGTTTTTCACCCTCTCGGTGGACAGGTACTCCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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| CDS TCA 72 bp | ATTCCACAGTACAAAAAGAACTGGAACATTGTGGGGTaGCAGCCAGCAATAATCCACAATGCTGTACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: IPQYKKNWNIVG*QPAIIHNAVLH Trigger: ATGCAGTACAGCATTGTGGATTATTGCTGGCTGTCACCCCACAATGTTCCAGTTCTTTTTGTACTGTGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045674.4 |
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