Pregenerated sensors for PLPP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031570Ensembl transcript IDs: ENSMUST00000068916.16, ENSMUST00000124764.8, ENSMUST00000133117.8, ENSMUST00000138548.2, ENSMUST00000139836.8, ENSMUST00000145678.8, ENSMUST00000210629.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGAGCTGGAGGAGCCAAGAGTTGAGTCGGCAGCAGTTAGCTTTTaGGAGGACCTTGGTTCAGTTCCCCAACGTGGCACTCACACTGGT | + |
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Preference number: 1 (lower is better) Translates to: SELEEPRVESAAVSF*EDLGSVPQRGTHTG Trigger: ACCAGTGTGAGTGCCACGTTGGGGAACTGAACCAAGGTCCTCTCAAAAGCTAACTGCTGCCGACTCAACTCTTGGCTCCTCCAGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
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| 3UTR CCA 90 bp | GCACCGTCCACAGTAATAAGTGGGAATCACAAAAATATACCACGCTaGGTTCCTGGGAGCTACAAAGGTCACAATGTAAAAGGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: APSTVISGNHKNIPR*VPGSYKGHNVKGWA Trigger: TGCCCAGCCTTTTACATTGTGACCTTTGTAGCTCCCAGGAACCCAGCGTGGTATATTTTTGTGATTCCCACTTATTACTGTGGACGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
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| 3UTR GCA 90 bp | AGAAATCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCAAATGGT | + |
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Preference number: 1 (lower is better) Translates to: RNPWLVRPVQLGGLI*LFSTEVDSAKFPNG Trigger: ACCATTTGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR CCA 90 bp | TCCACTGAGGTAGATTCAGCTAAATTTCCAAATGGTGCAACTCACTaGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTT | + |
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Preference number: 1 (lower is better) Translates to: STEVDSAKFPNGATH*ASVRTEVCACPEMV Trigger: AACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGAAATTTAGCTGAATCTACCTCAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR GCA 90 bp | CTATCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTaGGCCATTTATTTCTTTATGAACAAAGGCAGAAAGTGTTGCATT | + |
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Preference number: 1 (lower is better) Translates to: LSVGPPYQVLVIASS*AIYFFMNKGRKCCI Trigger: AATGCAACACTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTGAGAGAAGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: PSERSPDRAVPGQALRPQAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...CTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACTTCTCTCACTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGGAAGTGCACGTCAGATCAGAATaGGCCAGCCCATCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DRAVPGQALRPQGLALEVHVRSE*ASPSGK Trigger: CTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTG...CACTTCCAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGAGAAGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCAAGCCAGAAATCCTTaGCTTGTGCGTCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SERSPDRAVPGQALRPQGQARNP*LVRPVQ Trigger: CTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG...CCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACTTCTCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGACTTCCCTCGGCCTTGTGGCGTGAAGCAGTGTAACTTCCCTGCCAGGCAAGCCAGAAATCCTTaGCTTGTGCGTCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LQDFPRPCGVKQCNFPARQARNP*LVRPVQ Trigger: CTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG...CCTGGCAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAGGGAAGTCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGTCCTCACTTAGACCCTaGAGAGGTCAAGCCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPDRAVPGQALRPQGLALSSLRP*RGQARN Trigger: ATTTCTGGCTTGACCTCTTCAGGGTCTAAGTGAGGA...CAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGGAAGTGGGCCAGACCAGCAAATaGAAAGGAAGAATGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: DRAVPGQALRPQGLALEVGQTSK*KGRMST Trigger: AGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCC...CACTTCCAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGGCTAGCCTTGGAAGTGGGGTAAAGTGCACAGCCTTGCGGAGGCAAGTACAAGCCAGAAATCCTTaGCTTGTGCGTCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SGASLGSGVKCTALRRQVQARNP*LVRPVQ Trigger: CTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG...TACTTGCCTCCGCAAGGCTGTGCACTTTACCCCACTTCCAAGGCTAGCCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGGCACTCACACTGGTCTaGCCCCACCTCCAGGGGATC | + |
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Preference number: 2 (lower is better) Translates to: VRTEVCACPEMVYGTLRQALTLV*PHLQGI Trigger: GATCCCCTGGAGGTGGGGTCAGACCAGTGTGAGTGC...CTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGGCTAGCCTTGGAAGTGGGGTAAAGTGCACAGCCTTGCGGAGGCAAGTATCCTCACTTAGACCCTaGAGAGGTCAAGCCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SGASLGSGVKCTALRRQVSSLRP*RGQARN Trigger: ATTTCTGGCTTGACCTCTTCAGGGTCTAAGTGAGGA...TACTTGCCTCCGCAAGGCTGTGCACTTTACCCCACTTCCAAGGCTAGCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTAGTACTGCCTGTAGCAGACATAGGCAAATGTCATTCCAATCATGGAGCCTCGGCCTTGTGGCGTaGAGCAGTGTAACTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GGSTACSRHRQMSFQSWSLGLVA*SSVTSR Trigger: CCTGGAAGTTACACTGCTTCACGCCACAAGGCCGAG...GCTCCATGATTGGAATGACATTTGCCTATGTCTGCTACAGGCAGTACTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAATGGTGCAACTCACTGGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCACACGTGCGGGACAGTaGAATCACGGCTGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SKWCNSLGFCEDGSLCLSTRAGQ*NHGCKE Trigger: CTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGT...GGACAAGCACAAACTTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GATTCAGCTAAATTTCCAAATGGTGCAACTCACTGGGCTTCTGTGAGGACGGAAGAGCTAGGGCAAGGCTaGCAGCGAGGCAGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: DSAKFPNGATHWASVRTEELGQG*QRGRLA Trigger: AGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTC...TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGAAATTTAGCTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGAGGTAGATCAAGCCAGAAATCCTTaGCTTGTGCGTCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VRPVQLGGLICLFSTEVDQARNP*LVRPVQ Trigger: CTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG...ATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGTCAGAGGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: TEVCACPEMVYGTLRQSEAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...CTCTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTGCTTGTAGTCACACGTaGGGGACAGTGCAATCACGG | + |
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Preference number: 2 (lower is better) Translates to: WASVRTEVCACPEMVYGTACSHT*GTVQSR Trigger: CCGTGATTGCACTGTCCCGCACGTGTGACTACAAGC...AGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGGCTTGTAGTCACACGTaGGGGACAGTGCAATCACGG | + |
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Preference number: 2 (lower is better) Translates to: VRTEVCACPEMVYGTLRQACSHT*GTVQSR Trigger: CCGTGATTGCACTGTCCCGCACGTGTGACTACAAGC...CTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGGCAAATGTCATTCCAATCATGGAGCCAACTAGCACATCTTGCCAGTGGTACACGTGCGGGACAGTaGAATCACGGCTGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HRQMSFQSWSQLAHLASGTRAGQ*NHGCKE Trigger: CTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGT...ACCACTGGCAAGATGTGCTAGTTGGCTCCATGATTGGAATGACATTTGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCAGCTAAATTTCCAAATGGTGCAACTCACTGGGCTTCTGTGAGGACGGAAACACGTGCGGGACAGTaGAATCACGGCTGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DSAKFPNGATHWASVRTETRAGQ*NHGCKE Trigger: CTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGT...TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGAAATTTAGCTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGTCAGCAAGCCAGAAATCCTTaGCTTGTGCGTCCTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GRKFVLVLKWFMALYVSQQARNP*LVRPVQ Trigger: CTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG...CTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGGGGTCATGAAAGCTGAGCTAGGGCAAGGCTaGCAGCGAGGCAGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: ALIYKGQGLCSVNGVMKAELGQG*QRGRLA Trigger: AGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTC...AGCTTTCATGACCCCATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGACGTGGCACTCACACTaGTCTGACCCCACCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PPYQVLVIASSCAIYFFMTWHSH*SDPTSR Trigger: CCTGGAGGTGGGGTCAGACCAGTGTGAGTGCCACGT...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
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| 3UTR-3UTR GCA 90 bp | AATCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCTTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: NPWLVRPVQLGGLICLFSLGGLI*LFSTEV Trigger: TACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAA...GGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTAGCAGACATAGGCAAATGTCATTCCAATCATGGAGCCAACTAGCACATAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ACSRHRQMSFQSWSQLAHRKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...ATGTGCTAGTTGGCTCCATGATTGGAATGACATTTGCCTATGTCTGCTACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGTCAGAGAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TEVCACPEMVYGTLRQSERKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...CTCTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR CAA 90 bp | CAAGCCAGAAATCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QARNPWLVRPVQLGG*ICLFSTEVDSAKFP Trigger: TGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGATTTCTGGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACGTGCGGGACAGTGCAATCACGGCTGCAAAGAGTAAAGGTGACAGAAAGAGGTTTCCTCTGGAGTaGCATTTAATCACTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: SHVRDSAITAAKSKGDRKRFPLE*HLITVD Trigger: GTCTACAGTGATTAAATGTCACTCCAGAGGAAACCT...CTTTCTGTCACCTTTACTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGGCTTGTAGTCACACGTaGGGGACAGTGCAATCACGG | + |
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Preference number: 2 (lower is better) Translates to: PPYQVLVIASSCAIYFFMACSHT*GTVQSR Trigger: CCGTGATTGCACTGTCCCGCACGTGTGACTACAAGC...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGAAAGTGTTGCATTGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: ASSCAIYFFMNKGRKCCIAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...AATGCAACACTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
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| 3UTR CAA 90 bp | AATCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTaGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCAAATGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NPWLVRPVQLGGLIC*FSTEVDSAKFPNGA Trigger: TGCACCATTTGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGTCAGAGTCCTCACTTAGACCCTaGAGAGGTCAAGCCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: TEVCACPEMVYGTLRQSESSLRP*RGQARN Trigger: ATTTCTGGCTTGACCTCTTCAGGGTCTAAGTGAGGA...CTCTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTAATGGTGCAACTCACTaGGCTTCTGTGAGGACGGAA | + |
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Preference number: 2 (lower is better) Translates to: GPPYQVLVIASSCAIYFFNGATH*ASVRTE Trigger: TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATT...AAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCAGCTAAATTTCCAAATGGTGCAACTCACTGGGCTTCTGTGAGGACGGAATTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: DSAKFPNGATHWASVRTELGGLI*LFSTEV Trigger: TACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAA...TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGAAATTTAGCTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCGAATCAGAGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTAAATGGTGCAACTCACTaGGCTTCTGTGAGGACGGAA | + |
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Preference number: 2 (lower is better) Translates to: KPNQSLAGTALIYKGQGLNGATH*ASVRTE Trigger: TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATT...TAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACTCTGATTCGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAACACGTCAGATCAGAATaGGCCAGCCCATCAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YQVLVIASSCAIYFFMNKHVRSE*ASPSGK Trigger: CTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTG...TTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLAGTALIYKGQGLCSVNRKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...ATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTATGTCATTCCAATCATaGAGCCAACTAGCACATCTT | + |
|
Preference number: 2 (lower is better) Translates to: WASVRTEVCACPEMVYGTMSFQS*SQLAHL Trigger: AAGATGTGCTAGTTGGCTCCATGATTGGAATGACAT...AGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAATGGTGCAACTCACTaGGCTTCTGTGAGGACGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PYQVLVIASSCAIYFFMNNGATH*ASVRTE Trigger: TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATT...GTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGGGGTCATGAAAGCTGCAGCAGTTAGCTTTTaGGAGGACCTTGGTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ALIYKGQGLCSVNGVMKAAAVSF*EDLGSV Trigger: AACTGAACCAAGGTCCTCTCAAAAGCTAACTGCTGC...AGCTTTCATGACCCCATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGTTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PPYQVLVIASSCAIYFFMLGGLI*LFSTEV Trigger: TACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAA...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTGTGATAGCCTCTAGTTaGGCCATTTATTTCTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: LSVGPPYQVLVIASSCAIVIASS*AIYFFM Trigger: CATAAAGAAATAAATGGCGCAACTAGAGGCTATCAC...AATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACGGCCAGACCAGCAAATaGAAAGGAAGAATGTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PYQVLVIASSCAIYFFMNGQTSK*KGRMST Trigger: AGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCC...GTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGAAAGTGTTGCATTTCCTCACTTAGACCCTaGAGAGGTCAAGCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ASSCAIYFFMNKGRKCCISSLRP*RGQARN Trigger: ATTTCTGGCTTGACCTCTTCAGGGTCTAAGTGAGGA...AATGCAACACTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAGGTTTCCTCTGGAGTaGCATTTAATCACTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPYQVLVIASSCAIYFFMRFPLE*HLITVD Trigger: GTCTACAGTGATTAAATGTCACTCCAGAGGAAACCT...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGATTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLVIASSCAIYFFMNKGRLGGLI*LFSTEV Trigger: TACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAA...TCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATGTGATAGCCTCTAGTTaGGCCATTTATTTCTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: SVGPPYQVLVIASSCAIYVIASS*AIYFFM Trigger: CATAAAGAAATAAATGGCGCAACTAGAGGCTATCAC...ATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAGGTTTCCTCTGGAGTaGCATTTAATCACTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PYQVLVIASSCAIYFFMNRFPLE*HLITVD Trigger: GTCTACAGTGATTAAATGTCACTCCAGAGGAAACCT...GTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGAAAGTGTTTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VIASSCAIYFFMNKGRKCLGGLI*LFSTEV Trigger: TACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAA...ACACTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAATAACAATAAAATGGTAGCTATCAGTTGGTCCTCCATACCAAGTTCTGGTTCCTCACTTAGACCCTaGAGAGGTCAAGCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YNNNKMVAISWSSIPSSGSSLRP*RGQARN Trigger: ATTTCTGGCTTGACCTCTTCAGGGTCTAAGTGAGGA...ACCAGAACTTGGTATGGAGGACCAACTGATAGCTACCATTTTATTGTTATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGTGATAGCCTCTAGTTaGGCCATTTATTTCTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: SLAGTALIYKGQGLCSVNVIASS*AIYFFM Trigger: CATAAAGAAATAAATGGCGCAACTAGAGGCTATCAC...ATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAATAACAATAAAATGGTAGCTATCAGTTGGTCCTCCATACCAAGTTCTGGTATGACTAGTAAGAGATaGCTCATTCCTCCAAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: YNNNKMVAISWSSIPSSGMTSKR*LIPPKL Trigger: AAGCTTTGGAGGAATGAGCCATCTCTTACTAGTCAT...ACCAGAACTTGGTATGGAGGACCAACTGATAGCTACCATTTTATTGTTATTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR GCA 72 bp | TCTTTCGGCCCTCGTTCACCACATCCTCGTCCCCCGTaGACGTCAGATCAGAATGGGCCAGCCCATCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SFGPRSPHPRPP*TSDQNGPAHQG Trigger: TCCCTGATGGGCTGGCCCATTCTGATCTGACGTGCACGGGGGACGAGGATGTGGTGAACGAGGGCCGAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTTCACCACATCCTCGTCCCCCGTGCACGTCAGATCAGAATGGGCCAGCCCGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LVHHILVPRARQIRMGQPVQLGG*ICLFST Trigger: AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGAC...GGGCTGGCCCATTCTGATCTGACGTGCACGGGGGACGAGGATGTGGTGAACGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGGACTTCCCTCGGCCTTGTGGCGTGAAGCAGTGTAACTTCCCTGCCAGGGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LQDFPRPCGVKQCNFPARVQLGG*ICLFST Trigger: AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGAC...CCTGGCAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAGGGAAGTCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 |
||
| 3UTR TCA 72 bp | GAGGAGCCAAGAGTTGAGTCGGCAGCAGTTAGCTTTTaGGAGGACCTTGGTTCAGTTCCCCAACGTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: EEPRVESAAVSF*EDLGSVPQRGT Trigger: AGTGCCACGTTGGGGAACTGAACCAAGGTCCTCTCAAAAGCTAACTGCTGCCGACTCAACTCTTGGCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGTGCGGGACAGTGCAATCACGGCTGCAAAGAGTAAAGGTGACAGAAAGGCAGCTTTTGAGAGGACCTaGGTTCAGTTCCCCAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: HVRDSAITAAKSKGDRKAAFERT*VQFPNV Trigger: CACGTTGGGGAACTGAACCAAGGTCCTCTCAAAAGC...TGCCTTTCTGTCACCTTTACTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR TCA 72 bp | CTGGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCTaGAATGGTTTATGGCACTCTACGTCAGTCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGFCEDGSLCLS*NGLWHSTSVRG Trigger: CCCTCTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SVGPPYQVLVIASSCAIYVQLGG*ICLFST Trigger: AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGAC...ATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGTGGAGGAGCCAAGAGTaGAGTCGGCAGCAGTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPYQVLVIASSCAIYFFMWRSQE*SRQQLA Trigger: AGCTAACTGCTGCCGACTCAACTCTTGGCTCCTCCA...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR GCA 72 bp | TGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTaGTTGTTCTCCACTGAGGTAGATTCAGCTAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: WLVRPVQLGGLI*LFSTEVDSAKF Trigger: AAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
||
| 3UTR CCA 72 bp | AAGTGGGAATCACAAAAATATACCACGCTGGGTTCCTaGGAGCTACAAAGGTCACAATGTAAAAGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KWESQKYTTLGS*ELQRSQCKRLG Trigger: GCCCAGCCTTTTACATTGTGACCTTTGTAGCTCCCAGGAACCCAGCGTGGTATATTTTTGTGATTCCCACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGATCTGCTTGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCAAATGGTGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GLICLFSTEVDSAKFPNGVQLGG*ICLFST Trigger: AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGAC...ACCATTTGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGGGGTCATGAAAGCTGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ALIYKGQGLCSVNGVMKAVQLGG*ICLFST Trigger: AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGAC...AGCTTTCATGACCCCATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGTACTGCCTGTAGCAGACATAGGCAAATGTCATTCCAATCATGGAGCCAAAGCCAACTAGCACATTaGCATCAACAAGAAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: GSTACSRHRQMSFQSWSQSQLAH*HQQEDM Trigger: CATGTCTTCTTGTTGATGCAAATGTGCTAGTTGGCT...TTGGCTCCATGATTGGAATGACATTTGCCTATGTCTGCTACAGGCAGTACTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139836.8 |
||
| 3UTR TCA 72 bp | CTAAATTTCCAAATGGTGCAACTCACTGGGCTTCTGTaGGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNFQMVQLTGLL*GRKFVLVLKWF Trigger: AAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATTTGGAAATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR GCA 72 bp | GGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTaGGCCATTTATTTCTTTATGAACAAAGGCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPPYQVLVIASS*AIYFFMNKGRK Trigger: CTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068916.16 ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTACTGCCCACTATCAGTTaGATTATGTTGGTAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QSLAGTALIYKGQGLCSVLPTIS*IMLVKT Trigger: TGTCTTTACCAACATAATCAAACTGATAGTGGGCAG...TACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAAGCAAGCCGAATCAGAGTTTAGCTGGCACTGCCCTTATTTATAAAGGACTGCCCACTATCAGTTaGATTATGTTGGTAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TKSKPNQSLAGTALIYKGLPTIS*IMLVKT Trigger: TGTCTTTACCAACATAATCAAACTGATAGTGGGCAG...TCCTTTATAAATAAGGGCAGTGCCAGCTAAACTCTGATTCGGCTTGCTTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| 3UTR CCA 72 bp | ACAGTAATAAGTGGGAATCACAAAAATATACCACGCTaGGTTCCTGGGAGCTACAAAGGTCACAATGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVISGNHKNIPR*VPGSYKGHNVK Trigger: TTTTACATTGTGACCTTTGTAGCTCCCAGGAACCCAGCGTGGTATATTTTTGTGATTCCCACTTATTACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| 3UTR CCA 72 bp | TGTCCCAGAGTTAGTATTTTAAGTAACAGTAGTTTCTaGTATAAAACTTATGGTGAGAAGTCTACAGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: CPRVSILSNSSF*YKTYGEKSTAP Trigger: CGGTGCTGTAGACTTCTCACCATAAGTTTTATACCAGAAACTACTGTTACTTAAAATACTAACTCTGGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPDRAVPGQALRPQGLALAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...CAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGGAAGTGGGCACGTCAGATCAGAATaGGCCAGCCCATCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSRARPSTETSGASLGSGHVRSE*ASPSGK Trigger: CTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTG...CCCACTTCCAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGCTAGCCTTGGAAGTGGGGTAAAGTGCACAGCCTTGCGGAGGCAAGTAGAGCTAGGGCAAGGCTaGCAGCGAGGCAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGASLGSGVKCTALRRQVELGQG*QRGRLA Trigger: AGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTC...TACTTGCCTCCGCAAGGCTGTGCACTTTACCCCACTTCCAAGGCTAGCCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTAGCCTTGGGCCAGACCAGCAAATaGAAAGGAAGAATGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPDRAVPGQALRPQGLALGQTSK*KGRMST Trigger: AGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCC...CAAGGCTAGCCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| 3UTR CAA 72 bp | AGAGCTAGGGCAAGGCTGGCAGCGAGGCAGGCTTGCTaGCTGTCGGTAGCGTCAGCTTTCCTTAGAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RARARLAARQAC*LSVASAFLRNL Trigger: CAAGTTTCTAAGGAAAGCTGACGCTACCGACAGCAAGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124764.8 ENSMUST00000145678.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTCTCGGCCTTGTGGCGTaGAGCAGTGTAACTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PWLVRPVQLGGLICLFSTLGLVA*SSVTSL Trigger: CAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAG...AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACCTCGGCCTTGTGGCGTaGAGCAGTGTAACTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLACASCPVRRVDLLVLHLGLVA*SSVTSL Trigger: CAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAG...GTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGCTTGTAGTCACACGTaGGGGACAGTGCAATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PWLVRPVQLGGLICLFSTACSHT*GTVQSR Trigger: CCGTGATTGCACTGTCCCGCACGTGTGACTACAAGC...AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGAGAAGTCCTGACAGAGCCGTGCCAGGCCAAGCACTGAGACCTCAGGGGCTTTCCTTAGAAACTTaGCGAGGAAGATCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SERSPDRAVPGQALRPQGLSLET*RGRSGT Trigger: TGTCCCTGATCTTCCTCGCCAAGTTTCTAAGGAAAG...CCCCTGAGGTCTCAGTGCTTGGCCTGGCACGGCTCTGTCAGGACTTCTCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | CTATCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTGAGCTAGGGCAAGGCTaGCAGCGAGGCAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVGPPYQVLVIASSCAIELGQG*QRGRLA Trigger: AGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTC...AATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGCTAGCCTTGGAAGTGGGGTAAAGTGCACAGCCTTGCGGAGGCAAGTAGGCCAGACCAGCAAATaGAAAGGAAGAATGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGASLGSGVKCTALRRQVGQTSK*KGRMST Trigger: AGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCC...TACTTGCCTCCGCAAGGCTGTGCACTTTACCCCACTTCCAAGGCTAGCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRTEVCACPEMVYGTLRQAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...CTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | GTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGAGGTAGATCACGTCAGATCAGAATaGGCCAGCCCATCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPVQLGGLICLFSTEVDHVRSE*ASPSGK Trigger: CTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTG...ATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| 3UTR CAA 72 bp | TCTGGGCGGGGCCTGCCCACTATCAGTTTGATTATGTaGGTAAAGACACCATTCAGAGCTAGGGCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGRGLPTISLIM*VKTPFRARARL Trigger: CAGCCTTGCCCTAGCTCTGAATGGTGTCTTTACCAACATAATCAAACTGATAGTGGGCAGGCCCCGCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124764.8 ENSMUST00000138548.2 ENSMUST00000145678.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGGCCAGACCAGCAAATaGAAAGGAAGAATGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PWLVRPVQLGGLICLFSTGQTSK*KGRMST Trigger: AGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCC...AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTCAGTCAGAGGGGGCTTGTAGTCACACGTaGGGGACAGTGCAATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCACPEMVYGTLRQSEGACSHT*GTVQSR Trigger: CCGTGATTGCACTGTCCCGCACGTGTGACTACAAGC...CCCCTCTGACTGACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGAAGATCAGGGACAGTaGAGTGAGAAAGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PWLVRPVQLGGLICLFSTEDQGQ*SEKGND Trigger: GTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTC...AGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTTGTTCTCCACGAAGATCAGGGACAGTaGAGTGAGAAAGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLACASCPVRRVDLLVLHEDQGQ*SEKGND Trigger: GTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTC...GTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAATGGAATGTTACCACAAAAAGCAAGCCGAATCAGAGTTTAGCTGGCACGCGGTAGAAGAAGTCTaGGCGGGGCCTGCCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLMECYHKKQAESEFSWHAVEEV*AGPAHY Trigger: ATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCGC...GTGCCAGCTAAACTCTGATTCGGCTTGCTTTTTGTGGTAACATTCCATTAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTCTGTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCACGTCAGATCAGAATaGGCCAGCCCATCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WASVRTEVCACPEMVYGTHVRSE*ASPSGK Trigger: CTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTG...AGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAGGACGGAAGTTTGTGCTTGTCCTGAAATGGTTTATGGCACTCTACGTACACGTGCGGGACAGTaGAATCACGGCTGCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVRTEVCACPEMVYGTLRTRAGQ*NHGCKE Trigger: CTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGT...ACGTAGAGTGCCATAAACCATTTCAGGACAAGCACAAACTTCCGTCCTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGCAAGCCGAATCAGAGTTTAGCTGGCACTGCCCTTATTTATAAAGGAGAGCTAGGGCAAGGCTaGCAGCGAGGCAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKPNQSLAGTALIYKGELGQG*QRGRLA Trigger: AGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAGCTC...TCCTTTATAAATAAGGGCAGTGCCAGCTAAACTCTGATTCGGCTTGCTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| 3UTR CAA 72 bp | AATCCTTGGCTTGTGCGTCCTGTCCAGTTAGGAGGGTaGATCTGCTTGTTCTCCACTGAGGTAGATTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPWLVRPVQLGG*ICLFSTEVDSA Trigger: AGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAGCCAAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTGATCTGCTTGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCAAATGGTCTCGGCCTTGTGGCGTaGAGCAGTGTAACTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLICLFSTEVDSAKFPNGLGLVA*SSVTSL Trigger: CAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAG...ACCATTTGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR TCA 90 bp | CTATCAGTTGGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTACCCTCATAAAAAGCTaGGAGCATCTGTGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVGPPYQVLVIASSCAITLIKS*EHLCMS Trigger: GGACATGCACAGATGCTCTCAGCTTTTTATGAGGGT...AATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACCAACTGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139836.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGGGACACGTGCGGGACAGTaGAATCACGGCTGCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGTALIYKGQGLCSVNGTRAGQ*NHGCKE Trigger: CTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGT...CCCATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | AAATATACCACGCTGGGTTCCTGGGAGCTACAAAGGTCACAATGTAAAAGGCTGGAAGATCAGGGACAGTaGAGTGAGAAAGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYTTLGSWELQRSQCKRLEDQGQ*SEKGND Trigger: GTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTC...CAGCCTTTTACATTGTGACCTTTGTAGCTCCCAGGAACCCAGCGTGGTATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPYQVLVIASSCAIYFFMRKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...CATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTAGGAGGGTTGATCTGCTTGTTCTCCACTGAGGTAGATTCAGCTAAATTTAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGGLICLFSTEVDSAKFRKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...AAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133117.8 ENSMUST00000139836.8 ENSMUST00000210629.2 |
||
| 3UTR CAA 72 bp | CTTGTGCGTCCTGTCCAGTTAGGAGGGTTGATCTGCTaGTTCTCCACTGAGGTAGATTCAGCTAAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVRPVQLGGLIC*FSTEVDSAKFP Trigger: TGGAAATTTAGCTGAATCTACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000124764.8 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 ENSMUST00000145678.8 ENSMUST00000210629.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGAGAAGATCAGGGACAGTaGAGTGAGAAAGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLVIASSCAIYFFMNKGREDQGQ*SEKGND Trigger: GTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTC...TCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000138548.2 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | TACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAAGGAAGAATGTCCACTaGGGAAGCTCTTTCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YQVLVIASSCAIYFFMNKRKNVH*GSSFGP Trigger: AGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCT...TTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR CCA 90 bp | GTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACAAAGGCAGAAAGTGTAATGGTGCAACTCACTaGGCTTCTGTGAGGACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIASSCAIYFFMNKGRKCNGATH*ASVRTE Trigger: TTCCGTCCTCACAGAAGCCCAGTGAGTTGCACCATT...ACACTTTCTGCCTTTGTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068916.16 |
||
| CDS-3UTR TCA 90 bp | AGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATAGTTTGTGCTTGTCCTaGAATGGTTTATGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLAGTALIYKGQGLCSVNSLCLS*NGLWHS Trigger: AGAGTGCCATAAACCATTTCAGGACAAGCACAAACT...ATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068916.16 |
||
| CDS-3UTR CCA 90 bp | GCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATGGGGTCATGAAAGCTATGTCATTCCAATCATaGAGCCAACTAGCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALIYKGQGLCSVNGVMKAMSFQS*SQLAHL Trigger: AAGATGTGCTAGTTGGCTCCATGATTGGAATGACAT...AGCTTTCATGACCCCATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068916.16 |
||
| CDS-3UTR CAA 90 bp | GGTTCCTGGGAGCTACAAAGGTCACAATGTAAAAGGCTGGGCAGCCCCTCACAACTGCCCACTATCAGTTaGATTATGTTGGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSWELQRSQCKRLGSPSQLPTIS*IMLVKT Trigger: TGTCTTTACCAACATAATCAAACTGATAGTGGGCAG...TTGTGAGGGGCTGCCCAGCCTTTTACATTGTGACCTTTGTAGCTCCCAGGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133117.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCAGACATAGGCAAATGTCATTCCAATCATGGAGCCAACTAGCACATTTGCATCTGTGCATGTCCTaGTACCAGCCTTGCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSRHRQMSFQSWSQLAHLHLCMS*YQPCQW Trigger: CCACTGGCAAGGCTGGTACAAGGACATGCACAGATG...CAAATGTGCTAGTTGGCTCCATGATTGGAATGACATTTGCCTATGTCTGCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139836.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTAGCTGGCACTGCCCTTATTTATAAAGGACAGGGATTATGTTCGGTAAATTGTGAGGACGGAAGTTaGTGCTTGTCCTTGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLAGTALIYKGQGLCSVNCEDGS*CLSLPV Trigger: CACTGGCAAGGACAAGCACAAACTTCCGTCCTCACA...ATTTACCGAACATAATCCCTGTCCTTTATAAATAAGGGCAGTGCCAGCTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210629.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTCTGCCCACTATCAGTTaGATTATGTTGGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPPYQVLVIASSCAIYFFLPTIS*IMLVKT Trigger: TGTCTTTACCAACATAATCAAACTGATAGTGGGCAG...AAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGGAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS-3UTR CAA 90 bp | CCATACCAAGTTCTGGTGATAGCCTCTAGTTGCGCCATTTATTTCTTTATGAACCTGCCCACTATCAGTTaGATTATGTTGGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PYQVLVIASSCAIYFFMNLPTIS*IMLVKT Trigger: TGTCTTTACCAACATAATCAAACTGATAGTGGGCAG...GTTCATAAAGAAATAAATGGCGCAACTAGAGGCTATCACCAGAACTTGGTATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS CAA 90 bp | AGGCAGGCTTGCTTGCTGTCGGTAGCGTCAGCTTTCCTTAGAAACTaGGCGAGGAAGATCAGGGACAGTGGAGTGAGAAAGGCAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: RQACLLSVASAFLRN*ARKIRDSGVRKAMT Trigger: TGTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTCCTCGCCAAGTTTCTAAGGAAAGCTGACGCTACCGACAGCAAGCAAGCCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
||
| CDS CAA 72 bp | TGCTTGCTGTCGGTAGCGTCAGCTTTCCTTAGAAACTaGGCGAGGAAGATCAGGGACAGTGGAGTGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLLSVASAFLRN*ARKIRDSGVRK Trigger: CTTTCTCACTCCACTGTCCCTGATCTTCCTCGCCAAGTTTCTAAGGAAAGCTGACGCTACCGACAGCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068916.16 ENSMUST00000133117.8 ENSMUST00000139836.8 |
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