Pregenerated sensors for PLPP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070366Ensembl transcript IDs: ENSMUST00000094018.6, ENSMUST00000205630.2, ENSMUST00000205896.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGAGACTTTATTATGTTTCACAACATGAACACGGAGGAGGGTaGGTGCTACAGCAAACACCTCAGGTAAAGGAATCACTGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GGRLYYVSQHEHGGG*VLQQTPQVKESLEE Trigger: CTCCTCCAGTGATTCCTTTACCTGAGGTGTTTGCTGTAGCACCCACCCTCCTCCGTGTTCATGTTGTGAAACATAATAAAGTCTCCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| 3UTR CCA 90 bp | GTCCCAACTTTACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTaGCAAGAACACCATCCACAGAACGGAAGCGGAGGGGACTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VPTLQIQSVERRHGE*QEHHPQNGSGGDFR Trigger: TCTAAAGTCCCCTCCGCTTCCGTTCTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAAAGTTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGCTGGGCGCACTGTCGGCTGTAGGCCTCTCTTCCTTCTTCAGTGAAGTGCCCGCCCACTCTCGGTaGAGCAGTGCAGCTTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GKLGALSAVGLSSFFSEVPAHSR*SSAACQ Trigger: CTGGCAAGCTGCACTGCTTCACCGAGAGTGGGCGGG...CACTTCACTGAAGAAGGAAGAGAGGCCTACAGCCGACAGTGCGCCCAGCTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCTGCTGGGGAAGCTTTTaGGGCCCTCCGACACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PLNPPSLCMGLSETGPGVCWGSF*GPPTPG Trigger: ACCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCA...GACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACTCGAAGGCTGACATACGGTTTGTGGCATGCTGTGTTGGCCAGAGGAGGACAAAGGAGGAATGGATaGTGGGGAAGCTTTTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: GTRRLTYGLWHAVLARGGQRRNG*WGSFCG Trigger: GCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTG...TCCTCCTCTGGCCAACACAGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGCTGGGCGCACTGTCGGCTGTAGGCCTCTCTTCCTTCTTCAGTGAAGTGCAGAATAGAAGAATGTaGCAGGGGCTCAGTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GKLGALSAVGLSSFFSEVQNRRM*QGLSVH Trigger: ATGGACACTGAGCCCCTGGCACATTCTTCTATTCTG...CACTTCACTGAAGAAGGAAGAGAGGCCTACAGCCGACAGTGCGCCCAGCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGAGGGTGGGTGCTACAGCAAACACCTCAGGTAAAGGAATCACTGGAGGAAGGAGACATGGAGAGTaGCAAGAACACCATCCACAG | + |
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Preference number: 2 (lower is better) Translates to: RRRVGATANTSGKGITGGRRHGE*QEHHPQ Trigger: CTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCT...TCCTCCAGTGATTCCTTTACCTGAGGTGTTTGCTGTAGCACCCACCCTCCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCAGAATAGAAGAATGTaGCAGGGGCTCAGTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLNPPSLCMGLSETGPGVQNRRM*QGLSVH Trigger: ATGGACACTGAGCCCCTGGCACATTCTTCTATTCTG...GACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR CAA 90 bp | TCTCAGAGACTGGTCCTGGTGTCCCAACTTTACAAATCCAAAGTGTaGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACAGAACG | + |
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Preference number: 2 (lower is better) Translates to: SQRLVLVSQLYKSKV*KGDMESGKNTIHRT Trigger: CGTTCTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGTGGGAGACTTTATTATGTTTCACAACATGAACACGGAGGAGGGTGGGCTCAGAGACTGGTCCTaGTGTCCCAACTTTACAAAT | + |
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Preference number: 2 (lower is better) Translates to: FWVGDFIMFHNMNTEEGGLRDWS*CPNFTN Trigger: ATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAG...CCCACCCTCCTCCGTGTTCATGTTGTGAAACATAATAAAGTCTCCCACCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| 3UTR-3UTR CCA 90 bp | AGCGGAGGGGACTTTAGAGTAGCTGATGAGAATCACATTACAGGAAATCCTTTCACAGGGCGATCATCATaGCACAGTACAAGGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SGGDFRVADENHITGNPFTGRSS*HSTRAR Trigger: TCTTGCCCTTGTACTGTGCCATGATGATCGCCCTGT...GAAAGGATTTCCTGTAATGTGATTCTCATCAGCTACTCTAAAGTCCCCTCCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR TCA 90 bp | GACATCAGAATAGAAGAATGTGCCAGGGGCTCAGTGTCCATTCTCCCTAGACACAAATATAGGCAAAAATaGGGCCAATCACTCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: DIRIEECARGSVSILPRHKYRQK*GQSLLQ Trigger: TTGGAGGAGTGATTGGCCTCATTTTTGCCTATATTT...GTGTCTAGGGAGAATGGACACTGAGCCCCTGGCACATTCTTCTATTCTGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCAACTTTACAAATCCTTTCCACTGTGTTATaGCATCAGAATAGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SLCMGLSETGPGVPTLQILSTVL*HQNRRM Trigger: CATTCTTCTATTCTGATGTCATAACACAGTGGAAAG...GATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCAAAGGCAAAGGAGGAATaGATGCTGGGGAAGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LQIQSVERRHGEWQEHHPKAKEE*MLGKLL Trigger: CAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTT...TGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACCTTTCCACTGTGTTATaGCATCAGAATAGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: YKSKVLKGDMESGKNTIHLSTVL*HQNRRM Trigger: CATTCTTCTATTCTGATGTCATAACACAGTGGAAAG...GTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGCTTGCCAGCCAGGTAGAATGTTGTGAAACCGAGGCCCGAGAAGGCAAAATGCTGGGGAAGCTTTaGCGGCCCTCCGACACCAGG | + |
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Preference number: 3 (lower is better) Translates to: VQLASQVECCETEAREGKMLGKL*RPSDTR Trigger: CCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCAT...TTTGCCTTCTCGGGCCTCGGTTTCACAACATTCTACCTGGCTGGCAAGCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| 3UTR GCA 72 bp | AGCATGCCCACCCCACCCTTGAATCCTCCTTCCTTGTaGATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SMPTPPLNPPSL*MGLSETGPGVP Trigger: TGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGGTGGGGTGGGCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| 3UTR TCA 72 bp | GAATCACTGGAGGAGCTAGCATGCCCACCCCACCCTTaGATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ESLEELACPPHP*ILLPCAWVSQR Trigger: TCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGGTGGGGTGGGCATGCTAGCTCCTCCAGTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| 3UTR TCA 72 bp | TCTCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTaGCATACGGTTTGTGGCATGCTGTGTTGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SLPSSVKWALEG*HTVCGMLCWPE Trigger: CTCTGGCCAACACAGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| 3UTR CCA 72 bp | TTACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTaGCAAGAACACCATCCACAGAACGGAAGCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LQIQSVERRHGE*QEHHPQNGSGG Trigger: CCCTCCGCTTCCGTTCTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR CCA 72 bp | GAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTaGTCCTGGTGTCCCAACTTTACAAATCCAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: ESSFLVHGSLRD*SWCPNFTNPKC Trigger: ACACTTTGGATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCAACTTTACAAATCTACAAATCCAAAGTGTaGAAAGGAGACATGGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SLCMGLSETGPGVPTLQIYKSKV*KGDMES Trigger: ACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTA...GATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR-3UTR CAA 90 bp | TTACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCATTGAATCCTCCTTCCTaGTGCATGGGTCTCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQIQSVERRHGEWQEHHPLNPPS*CMGLSE Trigger: CTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAA...TGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| 3UTR CCA 72 bp | CTTTATTATGTTTCACAACATGAACACGGAGGAGGGTaGGTGCTACAGCAAACACCTCAGGTAAAGGAATCA | + |
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Preference number: 3 (lower is better) Translates to: LYYVSQHEHGGG*VLQQTPQVKES Trigger: TGATTCCTTTACCTGAGGTGTTTGCTGTAGCACCCACCCTCCTCCGTGTTCATGTTGTGAAACATAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | CTCTCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCCCGCCCACTCTCGGTaGAGCAGTGCAGCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSFFSEVGTRRLTYGLWPAHSR*SSAACQ Trigger: CTGGCAAGCTGCACTGCTTCACCGAGAGTGGGCGGG...CCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205896.2 |
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| 3UTR CAA 72 bp | GCTAGCATGCCCACCCCACCCTTGAATCCTCCTTCCTaGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ASMPTPPLNPPS*CMGLSETGPGV Trigger: GACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGGTGGGGTGGGCATGCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR GCA 90 bp | TCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCAACTTTACAAATCTGCTGGGGAAGCTTTTaGGGCCCTCCGACACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLCMGLSETGPGVPTLQICWGSF*GPPTPG Trigger: ACCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCA...GATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | ACCTCAGGTAAAGGAATCACTGGAGGAGCTAGCATGCCCACCCCACCCTTGAATAGTACAAGGGCAAGATaGCAGCACAGAGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSGKGITGGASMPTPPLNSTRAR*QHRASS Trigger: GCTGGAGGCTCTGTGCTGCCATCTTGCCCTTGTACT...ATTCAAGGGTGGGGTGGGCATGCTAGCTCCTCCAGTGATTCCTTTACCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | GCCCACCCCACCCTTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGTGTGGCATGCTGTGTTaGCCAGAGGAGGATAATGTT | + |
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Preference number: 4 (lower is better) Translates to: AHPTLESSFLVHGSLRDWCGMLC*PEEDNV Trigger: AACATTATCCTCCTCTGGCCAACACAGCATGCCACA...CCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGGTGGGGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | TACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACCCCGCCCACTCTCGGTaGAGCAGTGCAGCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YKSKVLKGDMESGKNTIHPAHSR*SSAACQ Trigger: CTGGCAAGCTGCACTGCTTCACCGAGAGTGGGCGGG...GTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | GAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCATGCTGTGTTGGCCAGACAGATCTCTTCCGGCTaGATGACTCTCTGGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: EVGTRRLTYGLWHAVLARQISSG*MTLWNG Trigger: TCCATTCCAGAGAGTCATCCAGCCGGAAGAGATCTG...TCTGGCCAACACAGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCATGCTAGTACAAGGGCAAGATaGCAGCACAGAGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFFSEVGTRRLTYGLWHASTRAR*QHRASS Trigger: GCTGGAGGCTCTGTGCTGCCATCTTGCCCTTGTACT...AGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205896.2 |
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| CDS-3UTR CCA 90 bp | GAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCATGCTGTGTTGGCCAGAACAGGGCGATCATCATaGCACAGTACAAGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EVGTRRLTYGLWHAVLARTGRSS*HSTRAR Trigger: TCTTGCCCTTGTACTGTGCCATGATGATCGCCCTGT...TCTGGCCAACACAGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205896.2 |
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| CDS-3UTR TCA 90 bp | GCCCACCCCACCCTTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGAAATATAGGCAAAAATaGGGCCAATCACTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: AHPTLESSFLVHGSLRDWKYRQK*GQSLLQ Trigger: TTGGAGGAGTGATTGGCCTCATTTTTGCCTATATTT...CCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGGTGGGGTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGAGAAGGCAAAGGAGGAATGGATGCTGGGGAAGCTTTTGCGGCCCTCCGGATGACTCTCTGGAATaGATCCAAAAATTCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: GPRRQRRNGCWGSFCGPPDDSLE*IQKFCK Trigger: TTTACAGAATTTTTGGATCCATTCCAGAGAGTCATC...CGGAGGGCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTTCTCGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCAGATCTCTTCCGGCTaGATGACTCTCTGGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: LSSFFSEVGTRRLTYGLWQISSG*MTLWNG Trigger: TCCATTCCAGAGAGTCATCCAGCCGGAAGAGATCTG...CCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CCA 90 bp | GACATGGAGAGTGGCAAGAACACCATCCACAGAACGGAAGCGGAGGGGACTTTAAAGGCAAAGGAGGAATaGATGCTGGGGAAGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DMESGKNTIHRTEAEGTLKAKEE*MLGKLL Trigger: CAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTT...TAAAGTCCCCTCCGCTTCCGTTCTGTGGATGGTGTTCTTGCCACTCTCCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTTGCCAGCCAGGTAGAATGTTGTGAAACCGAGGCCCGAGAAGGCAAAGGCTGGATGACTCTCTaGAATGGATCCAAAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: VQLASQVECCETEAREGKGWMTL*NGSKNS Trigger: AGAATTTTTGGATCCATTCCAGAGAGTCATCCAGCC...TTTGCCTTCTCGGGCCTCGGTTTCACAACATTCTACCTGGCTGGCAAGCTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205630.2 |
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| CDS-3UTR CCA 90 bp | GACATCAGAATAGAAGAATGTGCCAGGGGCTCAGTGTCCATTCTCCCTAGACACCTGACATACGGTTTGTaGCATGCTGTGTTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: DIRIEECARGSVSILPRHLTYGL*HAVLAR Trigger: TCTGGCCAACACAGCATGCCACAAACCGTATGTCAG...GTGTCTAGGGAGAATGGACACTGAGCCCCTGGCACATTCTTCTATTCTGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | TTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCAATTCATCACCCCATCTaGAAAGCAGCGGTAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LNPPSLCMGLSETGPGVPIHHPI*KAAVKE Trigger: TTCTTTTACCGCTGCTTTCCAGATGGGGTGATGAAT...TGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | CTCTCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGGGTAGGTATGTTGTCTaGCTGCACCAAAGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSFFSEVGTRRLTYGLWGRYVV*LHQRIF Trigger: AAAAATCCTTTGGTGCAGTCAGACAACATACCTACC...CCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR GCA 90 bp | AGCGGAGGGGACTTTAGAGTAGCTGATGAGAATCACATTACAGGAAATCCTTTCCAAAGGAGGAATGGATaGTGGGGAAGCTTTTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGGDFRVADENHITGNPFQRRNG*WGSFCG Trigger: GCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTG...GAAAGGATTTCCTGTAATGTGATTCTCATCAGCTACTCTAAAGTCCCCTCCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR GCA 90 bp | AGCGGAGGGGACTTTAGAGTAGCTGATGAGAATCACATTACAGGAAATCCTTTCGCTTGTAGTCACACATaGGGGACAGGGCGATCATCA | + |
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Preference number: 4 (lower is better) Translates to: SGGDFRVADENHITGNPFACSHT*GTGRSS Trigger: TGATGATCGCCCTGTCCCGCATGTGTGACTACAAGC...GAAAGGATTTCCTGTAATGTGATTCTCATCAGCTACTCTAAAGTCCCCTCCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | TGGGTGGGAGACTTTATTATGTTTCACAACATGAACACGGAGGAGGGTGGGTGCGGTAGGTATGTTGTCTaGCTGCACCAAAGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: WVGDFIMFHNMNTEEGGCGRYVV*LHQRIF Trigger: AAAAATCCTTTGGTGCAGTCAGACAACATACCTACC...GCACCCACCCTCCTCCGTGTTCATGTTGTGAAACATAATAAAGTCTCCCACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | TCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCATGGTAGGTATGTTGTCTaGCTGCACCAAAGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSFFSEVGTRRLTYGLWHGRYVV*LHQRIF Trigger: AAAAATCCTTTGGTGCAGTCAGACAACATACCTACC...ATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CCA 90 bp | TACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACACAGGGCGATCATCATaGCACAGTACAAGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: YKSKVLKGDMESGKNTIHTGRSS*HSTRAR Trigger: TCTTGCCCTTGTACTGTGCCATGATGATCGCCCTGT...GTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR TCA 90 bp | GTAGCTGATGAGAATCACATTACAGGAAATCCTTTCCACTGTGTTATGACATCACTCTTCCTTCTTCAGTaGAGTGGGCACTCGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VADENHITGNPFHCVMTSLFLLQ*SGHSKA Trigger: AGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAG...TGATGTCATAACACAGTGGAAAGGATTTCCTGTAATGTGATTCTCATCAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR GCA 90 bp | GTAGCTGATGAGAATCACATTACAGGAAATCCTTTCCACTGTGTTATGACATCAATACGGTTTGTGGCATaGTGTGTTGGCCAGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VADENHITGNPFHCVMTSIRFVA*CVGQRR Trigger: CCTCCTCTGGCCAACACAGCATGCCACAAACCGTAT...TGATGTCATAACACAGTGGAAAGGATTTCCTGTAATGTGATTCTCATCAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCTTCTTCAGTGAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGGATGACTCTCTGGAATaGATCCAAAAATTCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSFFSEVGTRRLTYGLWDDSLE*IQKFCK Trigger: TTTACAGAATTTTTGGATCCATTCCAGAGAGTCATC...CCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTCACTGAAGAAGGAAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CCA 90 bp | CAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACAGGGCTGGATGACTCTCTaGAATGGATCCAAAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: QIQSVERRHGEWQEHHPQGWMTL*NGSKNS Trigger: AGAATTTTTGGATCCATTCCAGAGAGTCATCCAGCC...CTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS-3UTR CCA 90 bp | ACTTTACAAATCCAAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCAGATCTCTTCCGGCTaGATGACTCTCTGGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: TLQIQSVERRHGEWQEHHQISSG*MTLWNG Trigger: TCCATTCCAGAGAGTCATCCAGCCGGAAGAGATCTG...ATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTTGGATTTGTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS-3UTR CCA 90 bp | TACAGGAAATCCTTTCCACTGTGTTATGACATCAGAATAGAAGAATGTGCCAGGGATGACTCTCTGGAATaGATCCAAAAATTCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: YRKSFPLCYDIRIEECARDDSLE*IQKFCK Trigger: TTTACAGAATTTTTGGATCCATTCCAGAGAGTCATC...CCTGGCACATTCTTCTATTCTGATGTCATAACACAGTGGAAAGGATTTCCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS GCA 90 bp | CGAGGCCCGAGAAGGCAAAGGAGGAATGGATGCTGGGGAAGCTTTTaGGGCCCTCCGACACCAGGTCAGGGTCACCTGTGCAGCGCATCT | + |
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Preference number: 5 (lower is better) Translates to: RGPRRQRRNGCWGSF*GPPTPGQGHLCSAS Trigger: AGATGCGCTGCACAGGTGACCCTGACCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTTCTCGGGCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CAA 90 bp | CCCTTGAATCCTCCTTCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCAGGCGGGTAGGTATGTaGTCTGACTGCACCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PLNPPSLCMGLSETGPGVRRVGM*SDCTKG Trigger: TCCTTTGGTGCAGTCAGACAACATACCTACCCGCCT...GACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGAAGGAGGATTCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS-3UTR CAA 90 bp | GAAGTGGGCACTCGAAGGCTGACATACGGTTTGTGGCATGCTGTGTTGGCCAGAAGGCGGGTAGGTATGTaGTCTGACTGCACCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: EVGTRRLTYGLWHAVLARRRVGM*SDCTKG Trigger: TCCTTTGGTGCAGTCAGACAACATACCTACCCGCCT...TCTGGCCAACACAGCATGCCACAAACCGTATGTCAGCCTTCGAGTGCCCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CAA 90 bp | TACAGGAAATCCTTTCCACTGTGTTATGACATCAGAATAGAAGAATGTGCCAGGATGCTGGGGAAGCTTTaGCGGCCCTCCGACACCAGG | + |
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Preference number: 5 (lower is better) Translates to: YRKSFPLCYDIRIEECARMLGKL*RPSDTR Trigger: CCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCAT...CCTGGCACATTCTTCTATTCTGATGTCATAACACAGTGGAAAGGATTTCCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS-3UTR CAA 90 bp | TCCTTGTGCATGGGTCTCTCAGAGACTGGTCCTGGTGTCCCAACTTTACAAATCTCCTTAATTTCAGTCTaGTCTGTCCGCCGGATAATT | + |
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Preference number: 5 (lower is better) Translates to: SLCMGLSETGPGVPTLQISLISV*SVRRII Trigger: AATTATCCGGCGGACAGACAAGACTGAAATTAAGGA...GATTTGTAAAGTTGGGACACCAGGACCAGTCTCTGAGAGACCCATGCACAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS TCA 90 bp | TGTGAGGAAAGAAATTGCAAACATGAGGCGGGTAGGTATGTTGTCTaGCTGCACCAAAGGATTTTTATAGAGCCAGATCTCTTCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CEERNCKHEAGRYVV*LHQRIFIEPDLFRL Trigger: CAGCCGGAAGAGATCTGGCTCTATAAAAATCCTTTGGTGCAGTCAGACAACATACCTACCCGCCTCATGTTTGCAATTTCTTTCCTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS-3UTR CAA 90 bp | GTAGCTGATGAGAATCACATTACAGGAAATCCTTTCCACTGTGTTATGACATCAAGGCGGGTAGGTATGTaGTCTGACTGCACCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VADENHITGNPFHCVMTSRRVGM*SDCTKG Trigger: TCCTTTGGTGCAGTCAGACAACATACCTACCCGCCT...TGATGTCATAACACAGTGGAAAGGATTTCCTGTAATGTGATTCTCATCAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS-3UTR CAA 90 bp | AAAGTGTTGAAAGGAGACATGGAGAGTGGCAAGAACACCATCCACAGAACGGAATCCTTAATTTCAGTCTaGTCTGTCCGCCGGATAATT | + |
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Preference number: 5 (lower is better) Translates to: KVLKGDMESGKNTIHRTESLISV*SVRRII Trigger: AATTATCCGGCGGACAGACAAGACTGAAATTAAGGA...TTCCGTTCTGTGGATGGTGTTCTTGCCACTCTCCATGTCTCCTTTCAACACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 |
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| CDS CAA 90 bp | CCGAGGCCCGAGAAGGCAAAGGAGGAATGGATGCTGGGGAAGCTTTaGCGGCCCTCCGACACCAGGTCAGGGTCACCTGTGCAGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: PRPEKAKEEWMLGKL*RPSDTRSGSPVQRI Trigger: GATGCGCTGCACAGGTGACCCTGACCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTTCTCGGGCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS GCA 72 bp | AGAAGGCAAAGGAGGAATGGATGCTGGGGAAGCTTTTaGGGCCCTCCGACACCAGGTCAGGGTCACCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RRQRRNGCWGSF*GPPTPGQGHLC Trigger: GCACAGGTGACCCTGACCTGGTGTCGGAGGGCCGCAAAAGCTTCCCCAGCATCCATTCCTCCTTTGCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094018.6 |
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| CDS TCA 72 bp | AGAAATTGCAAACATGAGGCGGGTAGGTATGTTGTCTaGCTGCACCAAAGGATTTTTATAGAGCCAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: RNCKHEAGRYVV*LHQRIFIEPDL Trigger: GAGATCTGGCTCTATAAAAATCCTTTGGTGCAGTCAGACAACATACCTACCCGCCTCATGTTTGCAATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 ENSMUST00000205896.2 |
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| CDS CAA 72 bp | AAGGACACTGCTAAGAAGGCTTCCTTAATTTCAGTCTaGTCTGTCCGCCGGATAATTTTCACCACGCAAATA | + |
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Preference number: 6 (lower is better) Translates to: KDTAKKASLISV*SVRRIIFTTQI Trigger: TATTTGCGTGGTGAAAATTATCCGGCGGACAGACAAGACTGAAATTAAGGAAGCCTTCTTAGCAGTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094018.6 ENSMUST00000205630.2 ENSMUST00000205896.2 |
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