Pregenerated sensors for PLPP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052151Ensembl transcript IDs: ENSMUST00000063879.13, ENSMUST00000165233.3, ENSMUST00000166804.2, ENSMUST00000218241.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGCCCTCCTTaGAAACCCACTGGAGATGGGAGACAGCCCTCAGAGCACGACCAC | + |
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Preference number: 1 (lower is better) Translates to: VSDKPLPGPCWDGPP*KPTGDGRQPSEHDH Trigger: GTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 90 bp | ACAGTGGGCCTCAGCAGCCGTGCCCACTTCCAGCAGAGCCGGGCCTaGACATATAGCGCCAGGAACAACATGCAATACATGCCAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TVGLSSRAHFQQSRA*TYSARNNMQYMPKE Trigger: CTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR CCA 90 bp | TATAGCCCACATAGATTGCAAAGGCCACCAAGAAGAACTGAACAGTaGGCCTCAGCAGCCGTGCCCACTTCCAGCAGAGCCGGGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: YSPHRLQRPPRRTEQ*ASAAVPTSSRAGPA Trigger: TGCAGGCCCGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR TCA 90 bp | GGACTCCTAGGCAGCCCCAAGGGTTGGCAGCTGTCTTCACACTTGTaGTCCTTGCCCAAGGTCAACTTCCCCACCCAGGCAAACAAGATG | + |
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Preference number: 1 (lower is better) Translates to: GLLGSPKGWQLSSHL*SLPKVNFPTQANKM Trigger: CATCTTGTTTGCCTGGGTGGGGAAGTTGACCTTGGGCAAGGATCACAAGTGTGAAGACAGCTGCCAACCCTTGGGGCTGCCTAGGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 90 bp | AGATGTTCATCACCTTCAGGGCCGTCAAGGAGGGTGCTGTCTTCATaGACAGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: RCSSPSGPSRRVLSS*TVSDKPLPGPCWDG Trigger: GCCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGCACCCTCCTTGACGGCCCTGAAGGTGATGAACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 90 bp | ACTTCCAGCAGAGCCGGGCCTGCACATATAGCGCCAGGAACAACATaGAATACATGCCAAAGGAGGAGTGGCCAGAGTAGAAGGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: TSSRAGPAHIAPGTT*NTCQRRSGQSRRTA Trigger: GGCTGTCCTTCTACTCTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCTGCTGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR GCA 90 bp | CCAGTGGTGCTTGTGGTCAGACACTCGGGTATAGCCCACATAGATTaGAAAGGCCACCAAGAAGAACTGAACAGTGGGCCTCAGCAGCCG | + |
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Preference number: 1 (lower is better) Translates to: PVVLVVRHSGIAHID*KGHQEELNSGPQQP Trigger: CGGCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCCGAGTGTCTGACCACAAGCACCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR CCA 90 bp | CCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTaGGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: PTSNAWLHIWSIWTE*GQDRTSSLRERLGG Trigger: GCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 90 bp | CTCAGAGCACGACCACATCTTTTGAAGTCATGTGATAGCAAGAAATaGAGAGGATGGGCCCTGCCAACACTCAGGGCCAGACAGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: LRARPHLLKSCDSKK*RGWALPTLRARQAP Trigger: GGGTGCCTGTCTGGCCCTGAGTGTTGGCAGGGCCCATCCTCTTCATTTCTTGCTATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CCA 90 bp | GATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATaGACAGAGTGGGGACAGGACAGAACATCAAGCCTGAGGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: DPGPTSNAWLHIWSI*TEWGQDRTSSLRER Trigger: CCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 90 bp | CCCACTGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTaGAGTCATGTGATAGCAAGAAATGAAGAGGATGGGCCCTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: PTGDGRQPSEHDHIF*SHVIARNEEDGPCQ Trigger: TTGGCAGGGCCCATCCTCTTCATTTCTTGCTATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCGGGGCCATGCTGGGATGGCCCTCCTTGAAAACCCACTGGAGATGGGAGGAAGAGGATGGGCCCTaGCAACACTCAGGGCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TSGAMLGWPSLKTHWRWEEEDGP*QHSGPD Trigger: GTCTGGCCCTGAGTGTTGGCAGGGCCCATCCTCTTC...CTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CAA 90 bp | AGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGCCCTCCTaGAAAACCCACTGGAGATGGGAGACAGCCCTCAGAGCACGACCA | + |
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Preference number: 2 (lower is better) Translates to: SLRQTTSGAMLGWPS*KTHWRWETALRARP Trigger: TGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGAGTGGGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTGGGGGCACTTTCTGGGCAACCTaGACTCCTAGGCAGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: WTEWGQDRTSSLRERLGGTFWAT*TPRQPQ Trigger: TTGGGGCTGCCTAGGAGTCCAGGTTGCCCAGAAAGT...GCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGAGTGGGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTGGGGGCCACACTTGTGATCCTTaGCCAAGGTCAACTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WTEWGQDRTSSLRERLGGHTCDP*PRSTSP Trigger: TGGGGAAGTTGACCTTGGGCAAGGATCACAAGTGTG...GCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CAA 90 bp | TCCAGTGGTGCTTGTGGTCAGACACTCGGGTATAGCCCACATAGATaGCAAAGGCCACCAAGAAGAACTGAACAGTGGGCCTCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSGACGQTLGYSPHR*QRPPRRTEQWASAA Trigger: GGCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCCGAGTGTCTGACCACAAGCACCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR-3UTR TCA 90 bp | CTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGGACAGGACAGAACATCAAGCCTaGGGGAGAGGCTTGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLPMLGYTFGPYGQSGDRTEHQA*GRGLGA Trigger: GGCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGT...CCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAACAGAACATCAAGCCTaGGGGAGAGGCTTGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSGTYFQCLATHLVHMDRTEHQA*GRGLGA Trigger: GGCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGT...TCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGAAAACCCACTGGAGATaGGAGACAGCCCTCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPGPTSNAWLHIWSIWTEKTHWR*ETALRA Trigger: TGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTT...CTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAATCTTCCACAGGCTTGAGAAAAGGATTCAGACCAAAACTATGTGTGACGAAGAGGATGGGCCCTaGCAACACTCAGGGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: VVIFHRLEKRIQTKTMCDEEDGP*QHSGPD Trigger: GTCTGGCCCTGAGTGTTGGCAGGGCCCATCCTCTTC...GTCACACATAGTTTTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGATTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGGACAGGAATCTTCCACAGGCTTaGGAAAAGGATTCAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: LLPMLGYTFGPYGQSGDRNLPQA*EKDSDQ Trigger: TTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGATT...CCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTCACGACCACATCTTTTaGAGTCATGTGATAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IRDLLPMLGYTFGPYGQSHDHIF*SHVIAR Trigger: TCTTGCTATCACATGACTTCAAAAGATGTGGTCGTG...ACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAAATCTTCCACAGGCTTaGGAAAAGGATTCAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: RSGTYFQCLATHLVHMDRNLPQA*EKDSDQ Trigger: TTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGATT...TCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCCACAGGCTTGAGAAAAGGATTCAGACCAAAACTATGTGTGACTTTCTGTCCTTGAAAACCCACTaGAGATGGGAGACAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: IFHRLEKRIQTKTMCDFLSLKTH*RWETAL Trigger: GAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGA...CAGAAAGTCACACATAGTTTTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | CTCAGCAGCCGTGCCCACTTCCAGCAGAGCCGGGCCTaGACATATAGCGCCAGGAACAACATGCAATACATG | + |
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Preference number: 3 (lower is better) Translates to: LSSRAHFQQSRA*TYSARNNMQYM Trigger: CATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCTGCTGGAAGTGGGCACGGCTGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR CCA 72 bp | GGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTaGGGGCCTCGAGTGGTAATCTTCCACAGGCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: GTGQNIKPEGEA*GPRVVIFHRLE Trigger: CTCAAGCCTGTGGAAGATTACCACTCGAGGCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 72 bp | TCACCTTCAGGGCCGTCAAGGAGGGTGCTGTCTTCATaGACAGTCTCAGACAAACCACTTCCGGGGCCATGC | + |
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Preference number: 3 (lower is better) Translates to: SPSGPSRRVLSS*TVSDKPLPGPC Trigger: GCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGCACCCTCCTTGACGGCCCTGAAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CCA 72 bp | AGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATaGCCCTCCTTGAAAACCCACTGGAGATGGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: SLRQTTSGAMLG*PSLKTHWRWET Trigger: TGTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | AGTCATGTGATAGCAAGAAATGAAGAGGATGGGCCCTaGCAACACTCAGGGCCAGACAGGCACCCAAGATCC | + |
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Preference number: 3 (lower is better) Translates to: SHVIARNEEDGP*QHSGPDRHPRS Trigger: GGATCTTGGGTGCCTGTCTGGCCCTGAGTGTTGGCAGGGCCCATCCTCTTCATTTCTTGCTATCACATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | CCAAGGGTTGGCAGCTGTCTTCACACTTGTGATCCTTaGCCAAGGTCAACTTCCCCACCCAGGCAAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: PRVGSCLHTCDP*PRSTSPPRQTR Trigger: TCTTGTTTGCCTGGGTGGGGAAGTTGACCTTGGGCAAGGATCACAAGTGTGAAGACAGCTGCCAACCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | AGAGCCGGGCCTGCACATATAGCGCCAGGAACAACATaGAATACATGCCAAAGGAGGAGTGGCCAGAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: RAGPAHIAPGTT*NTCQRRSGQSR Trigger: TCTACTCTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR GCA 72 bp | CCTGCACATATAGCGCCAGGAACAACATGCAATACATaGCAAAGGAGGAGTGGCCAGAGTAGAAGGACAGCC | + |
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Preference number: 3 (lower is better) Translates to: PAHIAPGTTCNT*QRRSGQSRRTA Trigger: GGCTGTCCTTCTACTCTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGCTATATGTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR GCA 72 bp | CTTGTGGTCAGACACTCGGGTATAGCCCACATAGATTaGAAAGGCCACCAAGAAGAACTGAACAGTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LVVRHSGIAHID*KGHQEELNSGP Trigger: AGGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCCGAGTGTCTGACCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
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| 3UTR CCA 72 bp | AATGCTTGGCTACACATTTGGTCCATATGGACAGAGTaGGGACAGGACAGAACATCAAGCCTGAGGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NAWLHIWSIWTE*GQDRTSSLRER Trigger: CCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CCA 72 bp | GATCCGGGACCTACTTCCAATGCTTGGCTACACATTTaGTCCATATGGACAGAGTGGGGACAGGACAGAACA | + |
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Preference number: 3 (lower is better) Translates to: DPGPTSNAWLHI*SIWTEWGQDRT Trigger: TGTTCTGTCCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CCA 72 bp | ATGGGAATGGCAGATCCGGGACCTACTTCCAATGCTTaGCTACACATTTGGTCCATATGGACAGAGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: MGMADPGPTSNA*LHIWSIWTEWG Trigger: TCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCTGCCATTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | CAAGATGTTCATCACCTTCAGGGCCGTCAAGGAGGGTaGTGTCTTCATGAACAGTCTCAGACAAACCACTTC | + |
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Preference number: 3 (lower is better) Translates to: QDVHHLQGRQGG*CLHEQSQTNHF Trigger: GAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGCACCCTCCTTGACGGCCCTGAAGGTGATGAACATCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR GCA 72 bp | ACAGATGGGAATGGCAGATCCGGGACCTACTTCCAATaGTTGGCTACACATTTGGTCCATATGGACAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: TDGNGRSGTYFQ*LATHLVHMDRV Trigger: CACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCTGCCATTCCCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR CCA 72 bp | CCTACTTCCAATGCTTGGCTACACATTTGGTCCATATaGACAGAGTGGGGACAGGACAGAACATCAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PTSNAWLHIWSI*TEWGQDRTSSL Trigger: CAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 72 bp | GATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTaGAGTCATGTGATAGCAAGAAATGAAGAGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: DGRQPSEHDHIF*SHVIARNEEDG Trigger: CCCATCCTCTTCATTTCTTGCTATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| 3UTR TCA 72 bp | AAAGTTTATAACACACCCTCCCATGAAACAGTAACTTaGAGTGTTTTGAAACAGATGGGAATGGCAGATCCG | + |
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Preference number: 3 (lower is better) Translates to: KVYNTPSHETVT*SVLKQMGMADP Trigger: CGGATCTGCCATTCCCATCTGTTTCAAAACACTTCAAGTTACTGTTTCATGGGAGGGTGTGTTATAAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR GCA 90 bp | GACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCGCCACCAGGGCTCCCTaGAGGAGGCCGACAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: DWPTGDFPASKAGRDRVFATRAP*RRPTRT Trigger: TGTCCTTGTCGGCCTCCTGCAGGGAGCCCTGGTGGC...GAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS-3UTR TCA 90 bp | AAGCCTGAGGGAGAGGCTTGGGGGCCTCGAGTGGTAATCTTCCACAGGCTTGAGACTTGGCCAGGTCGGTaGGAGACTGGCTCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KPEGEAWGPRVVIFHRLETWPGR*ETGSQQ Trigger: CTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGT...CTCAAGCCTGTGGAAGATTACCACTCGAGGCCCCCAAGCCTCTCCCTCAGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR GCA 90 bp | CCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCATAGCAGGGCCTCAGCAGCCGTaGCCACTTCCAGCAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PTGDFPASKAGRDRVFIAGPQQP*PLPAEP Trigger: CGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCC...TGCTATGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS-3UTR CCA 90 bp | GACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCTCCTCCTGGCAGGGCTaGGGTGGCCGGGATTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: DWPTGDFPASKAGRDRVFSSWQG*GGRDLK Trigger: CTTCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGA...GAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS-3UTR CCA 90 bp | TCCTTGAAAACCCACTGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTGGCACTTCATCCTCCTaGCAGGGCTGGGGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTHWRWETALRARPHLGTSSS*QGWGGR Trigger: CCGGCCACCCCAGCCCTGCCAGGAGGATGAAGTGCC...AAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCATAGCAGGCACTTCATCCTCCTaGCAGGGCTGGGGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTGDFPASKAGRDRVFIAGTSSS*QGWGGR Trigger: CCGGCCACCCCAGCCCTGCCAGGAGGATGAAGTGCC...TGCTATGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTCATGAACAGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGCCCACTTGGCCAGGTCGGTaGGAGACTGGCTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFMNSLRQTTSGAMLGWPTWPGR*ETGSQQ Trigger: CTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGT...GGGCCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGGCCATGCTGGGATGGCCCTCCTTGAAAACCCACTGGAGATGGGAGACCATAGCCAGAACAGTTaGCCTGGCTCCAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRGHAGMALLENPLEMGDHSQNS*PGSSQG Trigger: ACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATG...GTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTGAAAACCCACTGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTGCCACCAGGGCTCCCTaGAGGAGGCCGACAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLKTHWRWETALRARPHLATRAP*RRPTRT Trigger: TGTCCTTGTCGGCCTCCTGCAGGGAGCCCTGGTGGC...AAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CCA 90 bp | TGGACAGAGTGGGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTGGGGGCCCAGAACAGTTGACCTaGCTCCAGTCAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WTEWGQDRTSSLRERLGGPEQLT*LQSGSQ Trigger: CTGTGACCCTGACTGGAGCCAGGTCAACTGTTCTGG...GCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CCA 90 bp | AGACCAAAACTATGTGTGACTTTCTGGGCAACCTGGACTCCTAGGCAGCCCCAAGGCACTTCATCCTCCTaGCAGGGCTGGGGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKLCVTFWATWTPRQPQGTSSS*QGWGGR Trigger: CCGGCCACCCCAGCCCTGCCAGGAGGATGAAGTGCC...TTGGGGCTGCCTAGGAGTCCAGGTTGCCCAGAAAGTCACACATAGTTTTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGGACAGGGGGCCTCAGCAGCCGTaGCCACTTCCAGCAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPMLGYTFGPYGQSGDRGPQQP*PLPAEP Trigger: CGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCC...CCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | GATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGGGGCCTCAGCAGCCGTaGCCACTTCCAGCAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPTSNAWLHIWSIWTEGPQQP*PLPAEP Trigger: CGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCC...CTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGGCCATGCTGGGATGGCCCTCCTTGAAAACCCACTGGAGATGGGAGACACATCACTCCAGTGGTaGTTGTGGTCAGACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FRGHAGMALLENPLEMGDTSLQW*LWSDTR Trigger: CCGAGTGTCTGACCACAAGCACCACTGGAGTGATGT...GTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCACCAGCCATGAGTCCGTaGGTGATCGTGTCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSPAMSP*VIVSGR Trigger: CCGTCCAGACACGATCACCCACGGACTCATGGCTGG...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
||
| CDS-3UTR CCA 90 bp | CCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCATAGCATCCTCCTGGCAGGGCTaGGGTGGCCGGGATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTGDFPASKAGRDRVFIASSWQG*GGRDLK Trigger: CTTCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGA...TGCTATGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCAGCCACCAAGAAGAACTaGACAGTGGGCCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSATKKN*TVGLSS Trigger: GCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGC...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTGAAGTCATGTGATGCCACCAGGGCTCCCTaGAGGAGGCCGACAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WRWETALRARPHLLKSCDATRAP*RRPTRT Trigger: TGTCCTTGTCGGCCTCCTGCAGGGAGCCCTGGTGGC...ATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCTGAGGGAGAGGCTTGGGGGCCTCGAGTGGTAATCTTCCACAGGCTTGAGGTAGGCTTCTCCCAATaGGACAAGGATGACAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPEGEAWGPRVVIFHRLEVGFSQ*DKDDSS Trigger: GCTACTGTCATCCTTGTCTCATTGGGAGAAGCCTAC...CTCAAGCCTGTGGAAGATTACCACTCGAGGCCCCCAAGCCTCTCCCTCAGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | GGGTATAGCCCACATAGATTGCAAAGGCCACCAAGAAGAACTGAACAGTGGGCCACTTGGCCAGGTCGGTaGGAGACTGGCTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYSPHRLQRPPRRTEQWATWPGR*ETGSQQ Trigger: CTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGT...GGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
||
| CDS-3UTR TCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCACATAGCCAGAACAGTTaGCCTGGCTCCAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSHSQNS*PGSSQG Trigger: ACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATG...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGGCCTCGAGTGGTAATCTTCCACAGGCTTGAGAAAAGGATTCAGACCGCCACCAAGAAGAACTaGACAGTGGGCCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGPRVVIFHRLEKRIQTATKKN*TVGLSS Trigger: GCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGC...GGTCTGAATCCTTTTCTCAAGCCTGTGGAAGATTACCACTCGAGGCCCCCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGGCCATGCTGGGATGGCCCTCCTTGAAAACCCACTGGAGATGGGAGACACAACATGCAATACATaGCAAAGGAGGAGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRGHAGMALLENPLEMGDTTCNT*QRRSGQ Trigger: CTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGT...GTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATCCCAGCATGGCCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | GACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCACATCACTCCAGTGGTaGTTGTGGTCAGACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DWPTGDFPASKAGRDRVFTSLQW*LWSDTR Trigger: CCGAGTGTCTGACCACAAGCACCACTGGAGTGATGT...GAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCACGTGTCTGGACGGTATaGGTACCGGATGGAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSRVWTV*VPDGVI Trigger: GATGACTCCATCCGGTACCCATACCGTCCAGACACG...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCAGTGGGTGATCGTGTCTaGACGGTATGGGTACCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSVGDRV*TVWVPD Trigger: ATCCGGTACCCATACCGTCCAGACACGATCACCCAC...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
||
| CDS-3UTR TCA 90 bp | TGGACAGAGTGGGGACAGGACAGAACATCAAGCCTGAGGGAGAGGCTTGGGGGCGGATTTGAAGAAATCTaGAACATAGCGGACCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WTEWGQDRTSSLRERLGGGFEEI*NIADRE Trigger: CTCACGGTCCGCTATGTTTCAGATTTCTTCAAATCC...GCCCCCAAGCCTCTCCCTCAGGCTTGATGTTCTGTCCTGTCCCCACTCTGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR CCA 90 bp | AGATCCGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGATCCTCCTGGCAGGGCTaGGGTGGCCGGGATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSGTYFQCLATHLVHMDRSSWQG*GGRDLK Trigger: CTTCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGA...TCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCATGAACAGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGGTAGGCTTCTCCCAATaGGACAAGGATGACAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVFMNSLRQTTSGAMLGWVGFSQ*DKDDSS Trigger: GCTACTGTCATCCTTGTCTCATTGGGAGAAGCCTAC...CCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR TCA 90 bp | AGACCAAAACTATGTGTGACTTTCTGGGCAACCTGGACTCCTAGGCAGCCCCAACATAGCCAGAACAGTTaGCCTGGCTCCAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPKLCVTFWATWTPRQPQHSQNS*PGSSQG Trigger: ACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATG...TTGGGGCTGCCTAGGAGTCCAGGTTGCCCAGAAAGTCACACATAGTTTTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTGAAGTCATGTGATGCCACCAAGAAGAACTaGACAGTGGGCCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRWETALRARPHLLKSCDATKKN*TVGLSS Trigger: GCTGCTGAGGCCCACTGTTCAGTTCTTCTTGGTGGC...ATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | ACACATGACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGGGGTGGCCGGGATTTaGAGAAATCTGAAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: THDWPTGDFPASKAGRDRGVAGI*RNLKHS Trigger: GCTATGTTTCAGATTTCTTCAAATCCCGGCCACCCC...CCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGTCATGTGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCAGGGGTGGCCGGGATTTaGAGAAATCTGAAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVTSQLPKQEETGCSGVAGI*RNLKHS Trigger: GCTATGTTTCAGATTTCTTCAAATCCCGGCCACCCC...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| 3UTR CAA 72 bp | GATGGGAATGGCAGATCCGGGACCTACTTCCAATGCTaGGCTACACATTTGGTCCATATGGACAGAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGNGRSGTYFQC*ATHLVHMDRVG Trigger: CCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCGGATCTGCCATTCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| 3UTR CAA 72 bp | GCTTGTGGTCAGACACTCGGGTATAGCCCACATAGATaGCAAAGGCCACCAAGAAGAACTGAACAGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACGQTLGYSPHR*QRPPRRTEQWA Trigger: GGCCCACTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCCGAGTGTCTGACCACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGGCCTCGAGTGGTAATCTTCCACAGGCTTGAGAAAAGGATTCAGACCGGGGTGGCCGGGATTTaGAGAAATCTGAAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGPRVVIFHRLEKRIQTGVAGI*RNLKHS Trigger: GCTATGTTTCAGATTTCTTCAAATCCCGGCCACCCC...GGTCTGAATCCTTTTCTCAAGCCTGTGGAAGATTACCACTCGAGGCCCCCAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | ACACATGACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGACAACATGCAATACATaGCAAAGGAGGAGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THDWPTGDFPASKAGRDRTTCNT*QRRSGQ Trigger: CTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGT...CCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGTCATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR GCA 90 bp | AGACCAAAACTATGTGTGACTTTCTGGGCAACCTGGACTCCTAGGCAGCCCCAAACATCACTCCAGTGGTaGTTGTGGTCAGACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKLCVTFWATWTPRQPQTSLQW*LWSDTR Trigger: CCGAGTGTCTGACCACAAGCACCACTGGAGTGATGT...TTGGGGCTGCCTAGGAGTCCAGGTTGCCCAGAAAGTCACACATAGTTTTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCATGAACAGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATGGGGATTTGAAGAAATCTaGAACATAGCGGACCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVFMNSLRQTTSGAMLGWGFEEI*NIADRE Trigger: CTCACGGTCCGCTATGTTTCAGATTTCTTCAAATCC...CCATCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGGGGTATGGGTACCGGATaGAGTCATCTCCACAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTYFQCLATHLVHMDRVGGMGTG*SHLHSR Trigger: TCTACTGTGGAGATGACTCCATCCGGTACCCATACC...CCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
||
| CDS-3UTR TCA 90 bp | CCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCATAGCAGGATTTGAAGAAATCTaGAACATAGCGGACCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTGDFPASKAGRDRVFIAGFEEI*NIADRE Trigger: CTCACGGTCCGCTATGTTTCAGATTTCTTCAAATCC...TGCTATGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTGAAGTCATGTGATGCGCCAGGAACAACATaGAATACATGCCAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRWETALRARPHLLKSCDAPGTT*NTCQRR Trigger: CCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGC...ATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGATGGGAGACAGCCCTCAGAGCACGACCACATCTTTTGAAGTCATGTGATACAACATGCAATACATaGCAAAGGAGGAGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRWETALRARPHLLKSCDTTCNT*QRRSGQ Trigger: CTGGCCACTCCTCCTTTGGCATGTATTGCATGTTGT...ATCACATGACTTCAAAAGATGTGGTCGTGCTCTGAGGGCTGTCTCCCATCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTCCACAGGCTTGAGAAAAGGATTCAGACCAAAACTATGTGTGACTTTCTGGCGCCAGGAACAACATaGAATACATGCCAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFHRLEKRIQTKTMCDFLAPGTT*NTCQRR Trigger: CCTCCTTTGGCATGTATTGCATGTTGTTCCTGGCGC...CAGAAAGTCACACATAGTTTTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAGCAGCCGTGCCCACTTCCAGCAGAGCCGGGCCTGCACATATAGCGCCCGGCCAATCATGTACTaGGCCAGGTCGGTGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSSRAHFQQSRACTYSARPIMY*ARSVRD Trigger: GTCTCTCACCGACCTGGCCAAGTACATGATTGGCCG...GGCGCTATATGTGCAGGCCCGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165233.3 |
||
| CDS TCA 90 bp | CAGGGCTGCCCCTGCACACCTCCAGCTGCACATAGCCAGAACAGTTaGCCTGGCTCCAGTCAGGGTCACAGACAGCCAAGAAACTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGCPCTPPAAHSQNS*PGSSQGHRQPRNWV Trigger: GACCCAGTTTCTTGGCTGTCTGTGACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATGTGCAGCTGGAGGTGTGCAGGGGCAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
||
| CDS TCA 90 bp | AGAAACTGGGTCGAAGACGGCCAATCATGTACTTGGCCAGGTCGGTaGGAGACTGGCTCACAGCAGCCCCGAACAGAAAGGTTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RNWVEDGQSCTWPGR*ETGSQQPRTERFPA Trigger: TGCTGGGAACCTTTCTGTTCGGGGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGTACATGATTGGCCGTCTTCGACCCAGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
||
| CDS CCA 90 bp | GATGACCCCAGCCATGAGTCCGTGGGTGATCGTGTCTGGACGGTATaGGTACCGGATGGAGTCATCTCCACAGTAGAACCCCCGCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: DDPSHESVGDRVWTV*VPDGVISTVEPPLI Trigger: TATAAGCGGGGGTTCTACTGTGGAGATGACTCCATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS CCA 90 bp | AGCTGTGATGATGACCCCAGCCATGAGTCCGTGGGTGATCGTGTCTaGACGGTATGGGTACCGGATGGAGTCATCTCCACAGTAGAACCC | + |
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Preference number: 5 (lower is better) Translates to: SCDDDPSHESVGDRV*TVWVPDGVISTVEP Trigger: GGGTTCTACTGTGGAGATGACTCCATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATCATCACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS-3UTR CAA 90 bp | ACTGGCCCACAGGTGACTTCCCAGCTTCCAAAGCAGGAAGAGACAGGGTGTTCATCACTCCAGTGGTGCTaGTGGTCAGACACTCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: TGPQVTSQLPKQEETGCSSLQWC*WSDTRV Trigger: TACCCGAGTGTCTGACCACAAGCACCACTGGAGTGA...TGAACACCCTGTCTCTTCCTGCTTTGGAAGCTGGGAAGTCACCTGTGGGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS CCA 90 bp | TGGGTACCGGATGGAGTCATCTCCACAGTAGAACCCCCGCTTATATaGTGCATTCACCAGGGTCAGGATGATGAAAGGCAGAGAGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: WVPDGVISTVEPPLI*CIHQGQDDERQRGD Trigger: GTCGCCTCTCTGCCTTTCATCATCCTGACCCTGGTGAATGCACCATATAAGCGGGGGTTCTACTGTGGAGATGACTCCATCCGGTACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS CCA 90 bp | ACAAGGATGACAGTAGCTGTGATGATGACCCCAGCCATGAGTCCGTaGGTGATCGTGTCTGGACGGTATGGGTACCGGATGGAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: TRMTVAVMMTPAMSP*VIVSGRYGYRMESS Trigger: AGATGACTCCATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATCATCACAGCTACTGTCATCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS-3UTR CAA 90 bp | CGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGCGGCCAATCATGTACTaGGCCAGGTCGGTGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: RDLLPMLGYTFGPYGQSGRPIMY*ARSVRD Trigger: GTCTCTCACCGACCTGGCCAAGTACATGATTGGCCG...CCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS GCA 90 bp | GTACCGGATGGAGTCATCTCCACAGTAGAACCCCCGCTTATATGGTaGATTCACCAGGGTCAGGATGATGAAAGGCAGAGAGGCGACCAA | + |
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Preference number: 5 (lower is better) Translates to: VPDGVISTVEPPLIW*IHQGQDDERQRGDQ Trigger: TTGGTCGCCTCTCTGCCTTTCATCATCCTGACCCTGGTGAATGCACCATATAAGCGGGGGTTCTACTGTGGAGATGACTCCATCCGGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS-3UTR CAA 90 bp | CTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGGACAGGTCACTCCAGTGGTGCTaGTGGTCAGACACTCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LLPMLGYTFGPYGQSGDRSLQWC*WSDTRV Trigger: TACCCGAGTGTCTGACCACAAGCACCACTGGAGTGA...CCTGTCCCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTGTCTTCATGAACAGTCTCAGACAAACCACTTCCGGGGCCATGCTGGGATATAGCCCACATAGATaGCAAAGGCCACCAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GAVFMNSLRQTTSGAMLGYSPHR*QRPPRR Trigger: TCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATA...TCCCAGCATGGCCCCGGAAGTGGTTTGTCTGAGACTGTTCATGAAGACAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR CAA 90 bp | CGGGACCTACTTCCAATGCTTGGCTACACATTTGGTCCATATGGACAGAGTGGGTATAGCCCACATAGATaGCAAAGGCCACCAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RDLLPMLGYTFGPYGQSGYSPHR*QRPPRR Trigger: TCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATA...CCCACTCTGTCCATATGGACCAAATGTGTAGCCAAGCATTGGAAGTAGGTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS TCA 90 bp | ACAGAAAGGTTCCCAGCACCTTGTAGATGGCAGCTACATAGTTGTTaGAGTTGGATCGCGAATAAAGACGGTCTGTGTACACCAGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TERFPAPCRWQLHSC*SWIANKDGLCTPGR Trigger: CCTACCTGGTGTACACAGACCGTCTTTATTCGCGATCCAACTTCAACAACTATGTAGCTGCCATCTACAAGGTGCTGGGAACCTTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCCACAGGCTTGAGAAAAGGATTCAGACCAAAACTATGTGTGACTTTCTGCGGCCAATCATGTACTaGGCCAGGTCGGTGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: IFHRLEKRIQTKTMCDFLRPIMY*ARSVRD Trigger: GTCTCTCACCGACCTGGCCAAGTACATGATTGGCCG...CAGAAAGTCACACATAGTTTTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCCACAGGCTTGAGAAAAGGATTCAGACCAAAACTATGTGTGACTTTCTGTCACTCCAGTGGTGCTaGTGGTCAGACACTCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: IFHRLEKRIQTKTMCDFLSLQWC*WSDTRV Trigger: TACCCGAGTGTCTGACCACAAGCACCACTGGAGTGA...CAGAAAGTCACACATAGTTTTGGTCTGAATCCTTTTCTCAAGCCTGTGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 |
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| CDS CAA 72 bp | CGGTCACCAAGGGTCAGCGTCAGTGACAGACTGGGCTaGCGCTCCGGCACTTCATCCTCCTGGCAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSPRVSVSDRLG*RSGTSSSWQGW Trigger: CCAGCCCTGCCAGGAGGATGAAGTGCCGGAGCGCAAGCCCAGTCTGTCACTGACGCTGACCCTTGGTGACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS CCA 72 bp | AGGGTCGGTCACCAAGGGTCAGCGTCAGTGACAGACTaGGCTTGCGCTCCGGCACTTCATCCTCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RVGHQGSASVTD*ACAPALHPPGR Trigger: CCTGCCAGGAGGATGAAGTGCCGGAGCGCAAGCCCAGTCTGTCACTGACGCTGACCCTTGGTGACCGACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS TCA 72 bp | CTGGCAGGGCTGGGGTGGCCGGGATTTGAAGAAATCTaGAACATAGCGGACCGTGAGGCAGGCCACCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LAGLGWPGFEEI*NIADREAGHQG Trigger: GCCCTGGTGGCCTGCCTCACGGTCCGCTATGTTTCAGATTTCTTCAAATCCCGGCCACCCCAGCCCTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS CCA 72 bp | GACAGACTGGGCTTGCGCTCCGGCACTTCATCCTCCTaGCAGGGCTGGGGTGGCCGGGATTTGAAGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: DRLGLRSGTSSS*QGWGGRDLKKS Trigger: AGATTTCTTCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGATGAAGTGCCGGAGCGCAAGCCCAGTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS TCA 72 bp | GTCGAAGACGGCCAATCATGTACTTGGCCAGGTCGGTaGGAGACTGGCTCACAGCAGCCCCGAACAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VEDGQSCTWPGR*ETGSQQPRTER Trigger: CCTTTCTGTTCGGGGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGTACATGATTGGCCGTCTTCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
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| CDS TCA 72 bp | CCCTGCACACCTCCAGCTGCACATAGCCAGAACAGTTaGCCTGGCTCCAGTCAGGGTCACAGACAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PCTPPAAHSQNS*PGSSQGHRQPR Trigger: TCTTGGCTGTCTGTGACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATGTGCAGCTGGAGGTGTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000166804.2 ENSMUST00000218241.2 |
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| CDS CCA 72 bp | GATGACCCCAGCCATGAGTCCGTGGGTGATCGTGTCTaGACGGTATGGGTACCGGATGGAGTCATCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: DDPSHESVGDRV*TVWVPDGVIST Trigger: TGTGGAGATGACTCCATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS CAA 72 bp | GCCAAGAAACTGGGTCGAAGACGGCCAATCATGTACTaGGCCAGGTCGGTGAGAGACTGGCTCACAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AKKLGRRRPIMY*ARSVRDWLTAA Trigger: GGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGTACATGATTGGCCGTCTTCGACCCAGTTTCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
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| CDS CAA 90 bp | TCACAGACAGCCAAGAAACTGGGTCGAAGACGGCCAATCATGTACTaGGCCAGGTCGGTGAGAGACTGGCTCACAGCAGCCCCGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SQTAKKLGRRRPIMY*ARSVRDWLTAAPNR Trigger: TCTGTTCGGGGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGTACATGATTGGCCGTCTTCGACCCAGTTTCTTGGCTGTCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
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| CDS CCA 72 bp | AGCCATGAGTCCGTGGGTGATCGTGTCTGGACGGTATaGGTACCGGATGGAGTCATCTCCACAGTAGAACCC | + |
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Preference number: 6 (lower is better) Translates to: SHESVGDRVWTV*VPDGVISTVEP Trigger: GGGTTCTACTGTGGAGATGACTCCATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS CCA 72 bp | ACAGTAGCTGTGATGATGACCCCAGCCATGAGTCCGTaGGTGATCGTGTCTGGACGGTATGGGTACCGGATG | + |
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Preference number: 6 (lower is better) Translates to: TVAVMMTPAMSP*VIVSGRYGYRM Trigger: CATCCGGTACCCATACCGTCCAGACACGATCACCCACGGACTCATGGCTGGGGTCATCATCACAGCTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS GCA 72 bp | GGAGTCATCTCCACAGTAGAACCCCCGCTTATATGGTaGATTCACCAGGGTCAGGATGATGAAAGGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GVISTVEPPLIW*IHQGQDDERQR Trigger: TCTCTGCCTTTCATCATCCTGACCCTGGTGAATGCACCATATAAGCGGGGGTTCTACTGTGGAGATGACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS CCA 72 bp | GATGGAGTCATCTCCACAGTAGAACCCCCGCTTATATaGTGCATTCACCAGGGTCAGGATGATGAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DGVISTVEPPLI*CIHQGQDDERQ Trigger: CTGCCTTTCATCATCCTGACCCTGGTGAATGCACCATATAAGCGGGGGTTCTACTGTGGAGATGACTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063879.13 |
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| CDS TCA 72 bp | TTCCCAGCACCTTGTAGATGGCAGCTACATAGTTGTTaGAGTTGGATCGCGAATAAAGACGGTCTGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: FPAPCRWQLHSC*SWIANKDGLCT Trigger: TGTACACAGACCGTCTTTATTCGCGATCCAACTTCAACAACTATGTAGCTGCCATCTACAAGGTGCTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063879.13 ENSMUST00000165233.3 ENSMUST00000166804.2 |
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