Pregenerated sensors for PLPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021759Ensembl transcript IDs: ENSMUST00000016144.12, ENSMUST00000070951.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTTCCAGCTGTTGCCTTTaGAGCGGGCCAGCGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IASFNKNVQVGQCFSDRLSSCCL*SGPAPL Trigger: CAGGGGCGCTGGCCCGCTTCAAAGGCAACAGCTGGA...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTGCCATAGCAGCTCCCTaGATGAGTCCAACTGTGACG | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLAIAAP*MSPTVT Trigger: CGTCACAGTTGGACTCATTCAGGGAGCTGCTATGGC...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTGCCCAAACTGGAGCATaGGTCGTAAGAGTCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLAQTGA*VVRVLP Trigger: GGGCAAGACTCTTACGACCCATGCTCCAGTTTGGGC...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGGGGATGGTACTGTCATaGTACGGGTACTTCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: YIASFNKNVQVGQCFSDRGMVLS*YGYFTL Trigger: CAGCGTGAAGTACCCGTACCATGACAGTACCATCCC...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTAGCCATCACTGCAGTTaGTTTTTGACCAGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLSHHCS*FLTSLG Trigger: ACCCAGACTGGTCAAAAATCAACTGCAGTGATGGCT...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCGGCTTTGTAAATGGTaGCTATGTAGGGATTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: YIASFNKNVQVGQCFSDRRLCKW*LCRDCR Trigger: TCGGCAATCCCTACATAGCCACCATTTACAAAGCCG...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTCAGAAAAAGCCCCTCTaGAATGGATATACTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLQKKPL*NGYTLP Trigger: GGGCAAAGTATATCCATTTCAGAGGGGCTTTTTCTG...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGGCAGTACATAGAGAATaGAGAGTGTCCCGAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: YIASFNKNVQVGQCFSDRAVHRE*RVSRVE Trigger: TTCTACTCGGGACACTCTTCATTCTCTATGTACTGC...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTATATGGAAAAAGCAATaGGCCCAAACTGGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLIWKKQ*AQTGAW Trigger: CCATGCTCCAGTTTGGGCTCATTGCTTTTTCCATAT...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | GTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTCTTTCGACGGCTTTGTAAATaGTGGCTATGTAGGGATTGC | + |
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Preference number: 4 (lower is better) Translates to: VNIILRRHVTYTFVHSVFRRLCK*WLCRDC Trigger: GCAATCCCTACATAGCCACCATTTACAAAGCCGTCG...AAAGACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTAGTCTCCCTTCATCCTaGCTTGAAGATAAAGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLSLPSS*LEDKVR Trigger: TCGCACTTTATCTTCAAGCCAGGATGAAGGGAGACT...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | ATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGCTTACTGCAGTTGATTTTTaGCCAGTCTGGGTTACAGAT | + |
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Preference number: 4 (lower is better) Translates to: IASFNKNVQVGQCFSDRLTAVDF*PVWVTD Trigger: ATCTGTAACCCAGACTGGTCAAAAATCAACTGCAGT...AAGCCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR GCA 90 bp | GTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTCTTTGGCTTGAAGATAAAGTaGGACAAACAGCATGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VNIILRRHVTYTFVHSVFGLKIK*DKQHAV Trigger: TACTGCATGCTGTTTGTCGCACTTTATCTTCAAGCC...AAAGACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CCA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGAAAGCCCCTCTGAAATaGATATACTTTGCCCAATTT | + |
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Preference number: 4 (lower is better) Translates to: YIASFNKNVQVGQCFSDRKAPLK*IYFAQF Trigger: AAATTGGGCAAAGTATATCCATTTCAGAGGGGCTTT...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR TCA 90 bp | GTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTCTTTAAGAATGTGTGTCCTTaGAGAAATCGGATACATACA | + |
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Preference number: 4 (lower is better) Translates to: VNIILRRHVTYTFVHSVFKNVCP*RNRIHT Trigger: TGTATGTATCCGATTTCTTCAAGGACACACATTCTT...AAAGACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS CCA 90 bp | AAATGGGTAAGCCAAGCCCCAGTATGGCGAGTATACGGGACGGGATaGTACTGTCATGGTACGGGTACTTCACGCTGTTGTCAGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: KWVSQAPVWRVYGTG*YCHGTGTSRCCQYR Trigger: TCTGTACTGACAACAGCGTGAAGTACCCGTACCATGACAGTACCATCCCGTCCCGTATACTCGCCATACTGGGGCTTGGCTTACCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS TCA 90 bp | ACTGCCTATAGTATACTTAGCGATGTCAGTCAAGGACTGACTAGCTaGGACTCCGAACAAAAAGGCTCCGACGGCTTTGTAAATGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: TAYSILSDVSQGLTS*DSEQKGSDGFVNGG Trigger: GCCACCATTTACAAAGCCGTCGGAGCCTTTTTGTTCGGAGTCTCAGCTAGTCAGTCCTTGACTGACATCGCTAAGTATACTATAGGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS GCA 90 bp | CTGCAGTTGATTTTTGACCAGTCTGGGTTACAGATAGCCAAGAAGTaGGGCCGCAAACTGCCTATAGTATACTTAGCGATGTCAGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LQLIFDQSGLQIAKK*GRKLPIVYLAMSVK Trigger: CTTGACTGACATCGCTAAGTATACTATAGGCAGTTTGCGGCCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCAAAAATCAACTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 90 bp | GGAGTCATCATTACAGAATATTCCTCGCTGGAAGGGGGTATGCCTTaGAGTAAGAATTGCAAAAGGCAATCCAGCCAGCAACACGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GVIITEYSSLEGGMP*SKNCKRQSSQQHAN Trigger: ATTTGCGTGTTGCTGGCTGGATTGCCTTTTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS GCA 90 bp | TTGATGGAGTCATCATTACAGAATATTCCTCGCTGGAAGGGGGTATaGCTTGAAGTAAGAATTGCAAAAGGCAATCCAGCCAGCAACACG | + |
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Preference number: 5 (lower is better) Translates to: LMESSLQNIPRWKGV*LEVRIAKGNPASNT Trigger: CGTGTTGCTGGCTGGATTGCCTTTTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGACTCCATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS-3UTR CAA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGTGGGTCGTAAGAGTCTaGCCCAGTCTCCCTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: YIASFNKNVQVGQCFSDRWVVRV*PSLPSS Trigger: GGATGAAGGGAGACTGGGCAAGACTCTTACGACCCA...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS TCA 90 bp | TTGACATATGTAGTCCTCAATATAGCCATCACTGCAGTTGATTTTTaGCCAGTCTGGGTTACAGATAGCCAAGAAGTGCGGCCGCAAACT | + |
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Preference number: 5 (lower is better) Translates to: LTYVVLNIAITAVDF*PVWVTDSQEVRPQT Trigger: AGTTTGCGGCCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCAAAAATCAACTGCAGTGATGGCTATATTGAGGACTACATATGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 90 bp | CACCTAATAAGGCATAAGGTATGGTGTCTTCCTTGTAAGGGTACTTaGTGGAGTCATCATTACAGAATATTCCTCGCTGGAAGGGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: HLIRHKVWCLPCKGT*WSHHYRIFLAGRGY Trigger: ATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGACTCCATCAAGTACCCTTACAAGGAAGACACCATACCTTATGCCTTATTAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS-3UTR CAA 90 bp | GTCAACATCATTCTGAGAAGGCATGTAACATACACATTTGTACATAGCGTCTTTGACAACCTGCCCTCCTaGACTTTCTCTTCATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VNIILRRHVTYTFVHSVFDNLPS*TFSSFP Trigger: AGGGAATGAAGAGAAAGTCAAGGAGGGCAGGTTGTC...AAAGACGCTATGTACAAATGTGTATGTTACATGCCTTCTCAGAATGATGTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS-3UTR CAA 90 bp | TACATAGCGTCTTTCAATAAAAATGTACAGGTGGGACAGTGTTTTAGTGACAGGTTTCTCTTCATTCCCTaGACATATGTAGTCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: YIASFNKNVQVGQCFSDRFLFIP*TYVVLN Trigger: ATTGAGGACTACATATGTCAAGGGAATGAAGAGAAA...CCTGTCACTAAAACACTGTCCCACCTGTACATTTTTATTGAAAGACGCTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS CCA 72 bp | AGCCAAGCCCCAGTATGGCGAGTATACGGGACGGGATaGTACTGTCATGGTACGGGTACTTCACGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQAPVWRVYGTG*YCHGTGTSRCC Trigger: ACAACAGCGTGAAGTACCCGTACCATGACAGTACCATCCCGTCCCGTATACTCGCCATACTGGGGCTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS CCA 72 bp | AGTATGGCGAGTATACGGGACGGGATGGTACTGTCATaGTACGGGTACTTCACGCTGTTGTCAGTACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SMASIRDGMVLS*YGYFTLLSVQK Trigger: TTTCTGTACTGACAACAGCGTGAAGTACCCGTACCATGACAGTACCATCCCGTCCCGTATACTCGCCATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016144.12 |
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| CDS CCA 72 bp | TGGGTCGTAAGAGTCTTGCCCAGTCTCCCTTCATCCTaGCTTGAAGATAAAGTGCGACAAACAGCATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: WVVRVLPSLPSS*LEDKVRQTACS Trigger: ACTGCATGCTGTTTGTCGCACTTTATCTTCAAGCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 72 bp | CTGCCTATAGTATACTTAGCGATGTCAGTCAAGGACTaGCTAGCTGAGACTCCGAACAAAAAGGCTCCGACG | + |
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Preference number: 6 (lower is better) Translates to: LPIVYLAMSVKD*LAETPNKKAPT Trigger: CGTCGGAGCCTTTTTGTTCGGAGTCTCAGCTAGTCAGTCCTTGACTGACATCGCTAAGTATACTATAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 72 bp | ACATACAAAGCAACCAGTATAGCCATAGCAGCTCCCTaGATGAGTCCAACTGTGACGTCACTCCAGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TYKATSIAIAAP*MSPTVTSLQWC Trigger: ACACCACTGGAGTGACGTCACAGTTGGACTCATTCAGGGAGCTGCTATGGCTATACTGGTTGCTTTGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS CCA 72 bp | AGACTCCGAACAAAAAGGCTCCGACGGCTTTGTAAATaGTGGCTATGTAGGGATTGCCGACAAAGGAATTCG | + |
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Preference number: 6 (lower is better) Translates to: RLRTKRLRRLCK*WLCRDCRQRNS Trigger: CGAATTCCTTTGTCGGCAATCCCTACATAGCCACCATTTACAAAGCCGTCGGAGCCTTTTTGTTCGGAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 72 bp | AGTATACTTAGCGATGTCAGTCAAGGACTGACTAGCTaGGACTCCGAACAAAAAGGCTCCGACGGCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SILSDVSQGLTS*DSEQKGSDGFV Trigger: TACAAAGCCGTCGGAGCCTTTTTGTTCGGAGTCTCAGCTAGTCAGTCCTTGACTGACATCGCTAAGTATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS CCA 72 bp | CTCCGAACAAAAAGGCTCCGACGGCTTTGTAAATGGTaGCTATGTAGGGATTGCCGACAAAGGAATTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: LRTKRLRRLCKW*LCRDCRQRNSN Trigger: ATTCGAATTCCTTTGTCGGCAATCCCTACATAGCCACCATTTACAAAGCCGTCGGAGCCTTTTTGTTCGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 72 bp | GTAGTCCTCAATATAGCCATCACTGCAGTTGATTTTTaGCCAGTCTGGGTTACAGATAGCCAAGAAGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: VVLNIAITAVDF*PVWVTDSQEVR Trigger: CCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCAAAAATCAACTGCAGTGATGGCTATATTGAGGACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS GCA 72 bp | ATTTTTGACCAGTCTGGGTTACAGATAGCCAAGAAGTaGGGCCGCAAACTGCCTATAGTATACTTAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: IFDQSGLQIAKK*GRKLPIVYLAM Trigger: CATCGCTAAGTATACTATAGGCAGTTTGCGGCCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016144.12 ENSMUST00000070951.8 |
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| CDS TCA 72 bp | ATTACAGAATATTCCTCGCTGGAAGGGGGTATGCCTTaGAGTAAGAATTGCAAAAGGCAATCCAGCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ITEYSSLEGGMP*SKNCKRQSSQQ Trigger: TTGCTGGCTGGATTGCCTTTTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS GCA 72 bp | TCATCATTACAGAATATTCCTCGCTGGAAGGGGGTATaGCTTGAAGTAAGAATTGCAAAAGGCAATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSLQNIPRWKGV*LEVRIAKGNPA Trigger: GGCTGGATTGCCTTTTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS TCA 72 bp | AGGCATAAGGTATGGTGTCTTCCTTGTAAGGGTACTTaGTGGAGTCATCATTACAGAATATTCCTCGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RHKVWCLPCKGT*WSHHYRIFLAG Trigger: TCCAGCGAGGAATATTCTGTAATGATGACTCCATCAAGTACCCTTACAAGGAAGACACCATACCTTATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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| CDS CCA 72 bp | TACTTGATGGAGTCATCATTACAGAATATTCCTCGCTaGAAGGGGGTATGCCTTGAAGTAAGAATTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: YLMESSLQNIPR*KGVCLEVRIAK Trigger: TTTTGCAATTCTTACTTCAAGGCATACCCCCTTCCAGCGAGGAATATTCTGTAATGATGACTCCATCAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070951.8 |
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