Pregenerated sensors for PLPBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031485Ensembl transcript IDs: ENSMUST00000033875.10, ENSMUST00000098851.12, ENSMUST00000209525.2, ENSMUST00000209856.2, ENSMUST00000210141.2, ENSMUST00000210765.2, ENSMUST00000211393.2, ENSMUST00000211518.2
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTCCTTCCTCGTCCTCCCTCTGTTCCATGTGTGTGGTTCAAGATaGGAGGCCTGGGCTTCTCTCAGGCGGCCATGCTCCCCTGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: MSFLVLPLFHVCGSR*EAWASLRRPCSPGH Trigger: ATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCATCTTGAACCACACACATGGAACAGAGGGAGGACGAGGAAGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR GCA 90 bp | ACAGCATGCTGGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTaGTCCACCGGAATGCCCAGCTTTTCACACAGCTCCCGCCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TACWKSMDMPMLSST*STGMPSFSHSSRRR Trigger: CCTGCGGCGGGAGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | ATGCGAGGCCTGGGCTTCTCTCAGGCGGCCATGCTCCCCTGGCCATaGATTCTTACCCTCAGGAACCATAAGCCACACAGACCTTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: MRGLGFSQAAMLPWP*ILTLRNHKPHRPFR Trigger: ACGGAAAGGTCTGTGTGGCTTATGGTTCCTGAGGGTAAGAATCCATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | CTCGTCCTCCCTCTGTTCCATGTGTGTGGTTCAAGATGCGAGGCCTaGGCTTCTCTCAGGCGGCCATGCTCCCCTGGCCATGGATTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LVLPLFHVCGSRCEA*ASLRRPCSPGHGFL Trigger: TAAGAATCCATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCATCTTGAACCACACACATGGAACAGAGGGAGGACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | CCCAGAGGCTGCGTAAGGTACAACCAAGCTGCAGCTGAAGATGGTTaGGTGCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATGGC | + |
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Preference number: 1 (lower is better) Translates to: PRGCVRYNQAAAEDG*VLWCPGPGQGHFYG Trigger: GCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCATCTTCAGCTGCAGCTTGGTTGTACCTTACGCAGCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | TTCAAGATGCGAGGCCTGGGCTTCTCTCAGGCGGCCATGCTCCCCTaGCCATGGATTCTTACCCTCAGGAACCATAAGCCACACAGACCT | + |
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Preference number: 1 (lower is better) Translates to: FKMRGLGFSQAAMLP*PWILTLRNHKPHRP Trigger: AGGTCTGTGTGGCTTATGGTTCCTGAGGGTAAGAATCCATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCATCTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | TGGGTGTGCTGGTGGTCGTGCCTGCGATTCCAGAATTCAGGAGGGTaGGACAGGAGGATTACCACAAGTTCTAGGCCAGCCCGGGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: WVCWWSCLRFQNSGG*DRRITTSSRPARVS Trigger: ACTAACCCGGGCTGGCCTAGAACTTGTGGTAATCCTCCTGTCTCACCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CCA 90 bp | TGCGTAAGGTACAACCAAGCTGCAGCTGAAGATGGTTGGGTGCTCTaGTGTCCCGGACCAGGGCAGGGTCACTTTTATGGCAGTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: CVRYNQAAAEDGWVL*CPGPGQGHFYGSQS Trigger: AGACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCATCTTCAGCTGCAGCTTGGTTGTACCTTACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | TCAGTGCCACAGAGGAGCTGTGATTGGAGACATCTAAGGCCAGGATaGAAACTGGGAGCAGAATCACCTCACTCCAGAGTAGCGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: SVPQRSCDWRHLRPG*KLGAESPHSRVAGT Trigger: TGTCCCCGCTACTCTGGAGTGAGGTGATTCTGCTCCCAGTTTCCATCCTGGCCTTAGATGTCTCCAATCACAGCTCCTCTGTGGCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR TCA 90 bp | GGGAGGCAAGATGGTTCAGTGTGGAAAGGTGCCTGCGGCCAAGCCTaGCAACCCAAGTTCTATCCCTGGGACCCACATAATGAGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GRQDGSVWKGACGQA*QPKFYPWDPHNEKK Trigger: TTTCTTCTCATTATGTGGGTCCCAGGGATAGAACTTGGGTTGTCAGGCTTGGCCGCAGGCACCTTTCCACACTGAACCATCTTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR GCA 90 bp | TACTCCCCAGGCACAAGCCAGGGAGACCTTTCACGGCTTAACCATTaGGGTTTCCCCAAAGCTTCCAGAGTTGTCCTCAGATCCCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: YSPGTSQGDLSRLNH*GFPKASRVVLRSLN Trigger: ATTAAGGGATCTGAGGACAACTCTGGAAGCTTTGGGGAAACCGCAATGGTTAAGCCGTGAAAGGTCTCCCTGGCTTGTGCCTGGGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR GCA 90 bp | TGGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTaGCAGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: WFCRTFLLPGAIHLV*QLHRVYGFQHREVG Trigger: CCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
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| 3UTR GCA 90 bp | AATCTGTGGGAAAGAAGCAAATGTGGAGGAGAGAGTGTCAGGCACTaGAGTGTAGCTGGTGCTGAGTCTCTTTCTAGCTGCCCAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: NLWERSKCGGESVRH*SVAGAESLSSCPEA Trigger: AGCCTCTGGGCAGCTAGAAAGAGACTCAGCACCAGCTACACTGCAGTGCCTGACACTCTCTCCTCCACATTTGCTTCTTTCCCACAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | TTGGGATACTCGATGGCTTATCTTGGTTGTCACCTCGACAACGTTTaGAACCAACTAAAACCCAAGCAGCTGGGCACACCTGCGAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LGYSMAYLGCHLDNV*NQLKPKQLGTPARD Trigger: GTCCCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAGTATCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CCA 90 bp | AAGACAGTAGCCCTGGGGAACACACCAGTAAGCGACATTTTTCCATaGTATCTGCTTCAGTTCCTGCCTCCAGATTCCTGCCGTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KTVALGNTPVSDIFP*YLLQFLPPDSCRGF Trigger: GAAGCCACGGCAGGAATCTGGAGGCAGGAACTGAAGCAGATACCATGGAAAAATGTCGCTTACTGGTGTGTTCCCCAGGGCTACTGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CCA 90 bp | CAGGCTCCATGCTTGGATGCTTTGTCCCCAGGTTTTGGCACTGTTTaGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGTACATCATGGG | + |
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Preference number: 1 (lower is better) Translates to: QAPCLDALSPGFGTV*LCLGDVALLEVHHG Trigger: CCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCATGGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR GCA 90 bp | CGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTaGGAGGGACTTTCCTTGGTTGAAATTCTGAAGTGGGAAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: RQRLEPTKTQAAGHT*EGLSLVEILKWEDP Trigger: TGGGTCTTCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR GCA 90 bp | AACAAAACTTTCTGGCATGTTGCTGGGTGTGCTGGTGGTCGTGCCTaGGATTCCAGAATTCAGGAGGGTGAGACAGGAGGATTACCACAA | + |
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Preference number: 1 (lower is better) Translates to: NKTFWHVAGCAGGRA*DSRIQEGETGGLPQ Trigger: TTGTGGTAATCCTCCTGTCTCACCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAAAGTTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CCA 90 bp | GCTGGGCACACCTGCGAGGGACTTTCCTTGGTTGAAATTCTGAAGTaGGAAGACCCATTTAAGTCTGGATGTTTTGCGGTCAGAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: AGHTCEGLSLVEILK*EDPFKSGCFAVRRP Trigger: GGGTCTTCTGACCGCAAAACATCCAGACTTAAATGGGTCTTCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CCA 90 bp | ATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: MVRPSHLLSSPLVLI*TITFSGSVGPFFCQ Trigger: CTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAGTGACTAGGCCTGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
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| 3UTR CCA 90 bp | TGTTTGGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGTACATCATaGGTGCCGGCTGTGACGTTTCAAAGTCCTATGTCCTTCCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: CLAVFGRCCLAGSTS*VPAVTFQSPMSFLV Trigger: GACGAGGAAGGACATAGGACTTTGAAACGTCACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | ACTCCAGGCTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGCCGTGTTTACCTTCACAAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TPGWDNWPLCVPRQL*SLKAAGRVYLHKEK Trigger: TTTCTCTTTGTGAAGGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAGCCTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | ACTAGGCCCAGCTGTTTCCTCATTTTTGGAGCTCTTACGGCACTGTaGACAGTCAGGAGCTGCACCATTCTGGCTTGTGAATACAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: TRPSCFLIFGALTAL*TVRSCTILACEYSV Trigger: CACACTGTATTCACAAGCCAGAATGGTGCAGCTCCTGACTGTTCACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAGCTGGGCCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR TCA 90 bp | GCTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATGGTCTCTaGAGGCAGCAGGCCGTGTTTACCTTCACAAAGAGAAATGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: AGTTGLYVFHDSYGL*RQQAVFTFTKRNGR Trigger: TCTTCCATTTCTCTTTGTGAAGGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | GAGCATCACTCCAACACCAGTACCTGGAAGTCTGGGTTTGGTCCTTaGCTTAGATCATGTCCAAAGCTTCCTATGGTCATGAGACCCACG | + |
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Preference number: 1 (lower is better) Translates to: EHHSNTSTWKSGFGP*LRSCPKLPMVMRPT Trigger: CGTGGGTCTCATGACCATAGGAAGCTTTGGACATGATCTAAGTCAAGGACCAAACCCAGACTTCCAGGTACTGGTGTTGGAGTGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | ACTCACCAGCAATCCTCTGGACTGTCTTCCAAGGGACTATGGGACTaGGCCAGGGCACTCAGCTGTTATTTCCTACCTTGGAAATTCATG | + |
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Preference number: 1 (lower is better) Translates to: THQQSSGLSSKGLWD*ARALSCYFLPWKFM Trigger: CATGAATTTCCAAGGTAGGAAATAACAGCTGAGTGCCCTGGCTCAGTCCCATAGTCCCTTGGAAGACAGTCCAGAGGATTGCTGGTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR GCA 90 bp | TTAATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTaGCAGGAGCTATTCACCTTGTCTGCCAGCTTCACCGAGTCTACG | + |
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Preference number: 1 (lower is better) Translates to: LIWTITFSGSVGPFF*QELFTLSASFTEST Trigger: CGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
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| 3UTR CCA 90 bp | CTTACTGTCCTCTCCGCTGGTGTTAATCTGGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: LTVLSAGVNLDHHLQ*FCRTFLLPGAIHLV Trigger: GACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
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| 3UTR CCA 90 bp | TGGTTGGGTGCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATaGCAGTCAGTCTTCAAAAGAAAGGTAATGATCTTAGCTTGCACA | + |
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Preference number: 1 (lower is better) Translates to: WLGALVSRTRAGSLL*QSVFKRKVMILACT Trigger: TGTGCAAGCTAAGATCATTACCTTTCTTTTGAAGACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | AAGCAGCTGGGCACACCTGCGAGGGACTTTCCTTGGTTGAAATTCTaGAGTGGGAAGACCCATTTAAGTCTGGATGTTTTGCGGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: KQLGTPARDFPWLKF*SGKTHLSLDVLRSE Trigger: TTCTGACCGCAAAACATCCAGACTTAAATGGGTCTTCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCCCAGCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR GCA 90 bp | CCCTGGGACCCACATAATGAGAAGAAAGACCCAACTCCTCCATGTTaGTCTAACCTCTATACACACAATCTGCCTCTCCCTATGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PWDPHNEKKDPTPPC*SNLYTHNLPLPMPF Trigger: GAAAGGCATAGGGAGAGGCAGATTGTGTGTATAGAGGTTAGAGCAACATGGAGGAGTTGGGTCTTTCTTCTCATTATGTGGGTCCCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CCA 90 bp | GCTGACCAAATATGTGTGTGCCAAATATGTGTGCTTTTCACAAGTTaGCCTGTTCCTCAGGCCAACCAATGTCGCCACCTAGAGGCAATC | + |
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Preference number: 1 (lower is better) Translates to: ADQICVCQICVLFTS*PVPQANQCRHLEAI Trigger: GATTGCCTCTAGGTGGCGACATTGGTTGGCCTGAGGAACAGGCCAACTTGTGAAAAGCACACATATTTGGCACACACATATTTGGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CCA 90 bp | ATTCCTCTGCTGGAAGTAAGCCTACTTCCTTTTGGGATTCCAATGTaGAATGAAAACTGGCAGCTCTTTAGGGTCTCCCTGGGATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: IPLLEVSLLPFGIPM*NENWQLFRVSLGFQ Trigger: CTGGAATCCCAGGGAGACCCTAAAGAGCTGCCAGTTTTCATTCCACATTGGAATCCCAAAAGGAAGTAGGCTTACTTCCAGCAGAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CCA 90 bp | TTTTCCATGGTATCTGCTTCAGTTCCTGCCTCCAGATTCCTGCCGTaGCTTCTTTCACTGCTGTGGAAGTATAAGCCGAATAAGCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: FSMVSASVPASRFLP*LLSLLWKYKPNKPF Trigger: AAAGGGCTTATTCGGCTTATACTTCCACAGCAGTGAAAGAAGCCACGGCAGGAATCTGGAGGCAGGAACTGAAGCAGATACCATGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CCA 90 bp | ACAAGTTTATGTGTGAAAACCAAACAAAACTTTCTGGCATGTTGCTaGGTGTGCTGGTGGTCGTGCCTGCGATTCCAGAATTCAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: TSLCVKTKQNFLACC*VCWWSCLRFQNSGG Trigger: CCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAAAGTTTTGTTTGGTTTTCACACATAAACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR TCA 90 bp | GCCACCTTCTGTGTGTTGTATTTACAGGCATGTCATGAAGCTCCGTaGAGACACTTTCTTGCTCATGAAGTTCAGAACCCTTCTTGCACG | + |
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Preference number: 1 (lower is better) Translates to: ATFCVLYLQACHEAP*RHFLAHEVQNPSCT Trigger: CGTGCAAGAAGGGTTCTGAACTTCATGAGCAAGAAAGTGTCTTCACGGAGCTTCATGACATGCCTGTAAATACAACACACAGAAGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR TCA 90 bp | CTGCTGCTATTAAAACCTGGGAGTAACCCAAGCAGCTGTCTCACATaGAACAATAGTCTCATAGCCTGGCTGAATGTTCTCAAGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LLLLKPGSNPSSCLT*NNSLIAWLNVLKRA Trigger: GGCTCTCTTGAGAACATTCAGCCAGGCTATGAGACTATTGTTTCATGTGAGACAGCTGCTTGGGTTACTCCCAGGTTTTAATAGCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR TCA 90 bp | AAGACAGTTGTAAGCCAGTGCCTGCCATTCACTCTTAACAGAAAGTaGGCAAGTAAGAAATCCGGGGTTCTGGATCACTCACTGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: KTVVSQCLPFTLNRK*ASKKSGVLDHSLHR Trigger: TCTGTGCAGTGAGTGATCCAGAACCCCGGATTTCTTACTTGCTCACTTTCTGTTAAGAGTGAATGGCAGGCACTGGCTTACAACTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | AGGTTGGGGACGGCCATCAGTTTGTTGACGTTTTGTTTCTGTAAATaGCCAATGAAGTGCCACTTGATCTCGGGACAGGAAGACAGAATC | + |
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Preference number: 1 (lower is better) Translates to: RLGTAISLLTFCFCK*PMKCHLISGQEDRI Trigger: GATTCTGTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGGTCATTTACAGAAACAAAACGTCAACAAACTGATGGCCGTCCCCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
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| 3UTR CCA 90 bp | CCTCTCAAACCTGATGCTGGATTTGGGATACTCGATGGCTTATCTTaGTTGTCACCTCGACAACGTTTGGAACCAACTAAAACCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: PLKPDAGFGILDGLS*LSPRQRLEPTKTQA Trigger: TGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAGTATCCCAAATCCAGCATCAGGTTTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CCA 90 bp | ATACACAAAGTGGTACCACGAAGACACATCCCACAGGACTTTAGCTaGGAATGGCTAGGGGAGCCAGAGAAGAAGAAAATATGTTATGGC | + |
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Preference number: 1 (lower is better) Translates to: IHKVVPRRHIPQDFS*EWLGEPEKKKICYG Trigger: GCCATAACATATTTTCTTCTTCTCTGGCTCCCCTAGCCATTCCCAGCTAAAGTCCTGTGGGATGTGTCTTCGTGGTACCACTTTGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | AATAGTGCTCCCTATCCGGACATTTGTAGATCCTACTTCAATCTGTaGGAAAGAAGCAAATGTGGAGGAGAGAGTGTCAGGCACTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: NSAPYPDICRSYFNL*ERSKCGGESVRHCS Trigger: ACTGCAGTGCCTGACACTCTCTCCTCCACATTTGCTTCTTTCCCACAGATTGAAGTAGGATCTACAAATGTCCGGATAGGGAGCACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | AAGCGGTACCATTTTATTCTTGTTGTTTCCAATGATGTCAAAAGGTaGCCAGACCTGCTGGGCACAATAGCGCTGGCCTGTAATACTTGG | + |
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Preference number: 1 (lower is better) Translates to: KRYHFILVVSNDVKR*PDLLGTIALACNTW Trigger: CCAAGTATTACAGGCCAGCGCTATTGTGCCCAGCAGGTCTGGTCACCTTTTGACATCATTGGAAACAACAAGAATAAAATGGTACCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CCA 90 bp | AAAGTGGTACCACGAAGACACATCCCACAGGACTTTAGCTGGGAATaGCTAGGGGAGCCAGAGAAGAAGAAAATATGTTATGGCTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: KVVPRRHIPQDFSWE*LGEPEKKKICYGLN Trigger: ATTCAAGCCATAACATATTTTCTTCTTCTCTGGCTCCCCTAGCCATTCCCAGCTAAAGTCCTGTGGGATGTGTCTTCGTGGTACCACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | ACAAGCCGAAATATATTAAAGAATTATATTGGGTCATCACACTGGTaGATCTTGACGAAGCAGCTCACCAGGAGGCTGGAGCTTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: TSRNILKNYIGSSHW*ILTKQLTRRLELLL Trigger: GAGGAGAAGCTCCAGCCTCCTGGTGAGCTGCTTCGTCAAGATTCACCAGTGTGATGACCCAATATAATTCTTTAATATATTTCGGCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
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| 3UTR GCA 90 bp | CAGCAGGCCGTGTTTACCTTCACAAAGAGAAATGGAAGATGTGTATaGCAACACATCTTAACTAGCCAGAAGAAGGCTCCATTTTCATCC | + |
|
Preference number: 1 (lower is better) Translates to: QQAVFTFTKRNGRCV*QHILTSQKKAPFSS Trigger: GGATGAAAATGGAGCCTTCTTCTGGCTAGTTAAGATGTGTTGGCATACACATCTTCCATTTCTCTTTGTGAAGGTAAACACGGCCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 90 bp | TCAGTCAGTGAGGTCATCAAAGCTACCTTCAATGAAGATGAACTATaGCTCTTGGCACAGATAAATGACCATGACACAACCCCACCAACT | + |
|
Preference number: 1 (lower is better) Translates to: SVSEVIKATFNEDEL*LLAQINDHDTTPPT Trigger: AGTTGGTGGGGTTGTGTCATGGTCATTTATCTGTGCCAAGAGTCATAGTTCATCTTCATTGAAGGTAGCTTTGATGACCTCACTGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 90 bp | TTACTCCATCTCAGGACTCTCTTTATTATCTTTAGAGCCAGAGACTaGACCCATGGTTCTGCATACACAAAGTGGTACCACGAAGACACA | + |
|
Preference number: 1 (lower is better) Translates to: LLHLRTLFIIFRARD*THGSAYTKWYHEDT Trigger: TGTGTCTTCGTGGTACCACTTTGTGTATGCAGAACCATGGGTTCAGTCTCTGGCTCTAAAGATAATAAAGAGAGTCCTGAGATGGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 90 bp | ACCATAAGCCACACAGACCTTTCCGTCTCTAAGTCGCCTTGGTCATaGCGTTTTATCACAGAAATAGAAAAGAGACAAACATATGACTTG | + |
|
Preference number: 1 (lower is better) Translates to: TISHTDLSVSKSPWS*RFITEIEKRQTYDL Trigger: CAAGTCATATGTTTGTCTCTTTTCTATTTCTGTGATAAAACGCCATGACCAAGGCGACTTAGAGACGGAAAGGTCTGTGTGGCTTATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 90 bp | CAGGAGAATCCTGAGTTCATAGCTAGCCTGAGATATACAGGGAAGTaGAGTTGTCTCCAAAACAAAGCAAGTCAAGTCGAACTAAATCAA | + |
|
Preference number: 1 (lower is better) Translates to: QENPEFIASLRYTGK*SCLQNKASQVELNQ Trigger: TTGATTTAGTTCGACTTGACTTGCTTTGTTTTGGAGACAACTTCACTTCCCTGTATATCTCAGGCTAGCTATGAACTCAGGATTCTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR TCA 90 bp | CATAGTGGTTTAAGTCTGGAAATTACATTCAGCAGCAACGGGTTCTaGAGTTATTTGTTAAATGAAGGATGTGAGGGCTGGAGGAAACAA | + |
|
Preference number: 1 (lower is better) Translates to: HSGLSLEITFSSNGF*SYLLNEGCEGWRKQ Trigger: TTGTTTCCTCCAGCCCTCACATCCTTCATTTAACAAATAACTTCAGAACCCGTTGCTGCTGAATGTAATTTCCAGACTTAAACCACTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR TCA 90 bp | CCAGGGCACTCAGCTGTTATTTCCTACCTTGGAAATTCATGTATGTaGGTTGCTAACACAGTACTTTATTTCAGTTTATATTTATTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: PGHSAVISYLGNSCM*VANTVLYFSLYLLS Trigger: TGACAATAAATATAAACTGAAATAAAGTACTGTGTTAGCAACTCACATACATGAATTTCCAAGGTAGGAAATAACAGCTGAGTGCCCTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR GCA 90 bp | CAAGAAATGAAAGACACTCTGGAGTCAATTTTGTATCTGCTTTTATaGAATGAAGCCATAGTCAGGGAGCATGCATATAACATTATAATG | + |
|
Preference number: 1 (lower is better) Translates to: QEMKDTLESILYLLL*NEAIVREHAYNIIM Trigger: CATTATAATGTTATATGCATGCTCCCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGACTCCAGAGTGTCTTTCATTTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR TCA 90 bp | TACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCTCCATGGGGCCACGGAAGAGTGTaGCTGGGGACATGCGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: YTHTLPEPQPSQESKPPWGHGRV*LGTCGH Trigger: GTGTCCGCATGTCCCCAGTCACACTCTTCCGTGGCC...CCATGGAGGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTGGTGGTCGTGCCTGCGATTCCAGAATTCAGGAGGGTGAGACAGGAGGACAAGCACTCTGCTGCTaGGCTACACCCTCCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: CAGGRACDSRIQEGETGGQALCC*ATPSSP Trigger: GGGACTGGAGGGTGTAGCTCAGCAGCAGAGTGCTTG...TCCTCCTGTCTCACCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CAA 90 bp | TTGTCTGCCAGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTaGGGGACGGCTGCGAAGAGAAAGGGGGAAGGGAGCAGTCTTCGC | + |
|
Preference number: 2 (lower is better) Translates to: LSASFTESTVSSIER*GTAAKRKGEGSSLR Trigger: GCGAAGACTGCTCCCTTCCCCCTTTCTCTTCGCAGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTTGGGGACGGCTGCGAAGAGAGCATGTTGCTGGGTGTaGTGGTGGTCGTGCCTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: FTESTVSSIERLGTAAKRACCWV*WWSCLR Trigger: TCGCAGGCACGACCACCAGCACACCCAGCAACATGC...TCTCTTCGCAGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCACCGGAATGCCCAGCTTTTCACACAGCTCCCGCCGCAGGGTCAGCAGCCTTGGAATTTCAGTCAGTaGCACAGAGGAGCTGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: LHRNAQLFTQLPPQGQQPWNFSQ*HRGAVI Trigger: AATCACAGCTCCTCTGTGGCACTGACTGAAATTCCA...AGGCTGCTGACCCTGCGGCGGGAGCTGTGTGAAAAGCTGGGCATTCCGGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR GCA 90 bp | ACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGTTACTGGCTGGGTGGGTCTGAGCCGTTGTGATCACTaGAGAACTGTGCTTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: THQGMGCWGEAVTGWVGLSRCDH*RTVLSG Trigger: ACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCT...CAGACCCACCCAGCCAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAGAGCCAGGCATGAGGCTAGACAAGGTGCTTGCCATCAGCTCCAATGCGGCCAGGATGGAAACTaGGAGCAGAATCACCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LSRARHEARQGACHQLQCGQDGN*EQNHLT Trigger: AGTGAGGTGATTCTGCTCCCAGTTTCCATCCTGGCC...GCATTGGAGCTGATGGCAAGCACCTTGTCTAGCCTCATGCCTGGCTCTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCTTGCTGGATAGGAACCTCGAGGGCAGGCGAGTCCCATCCCACCAGCAAGGCCAAAGAGGCTTTTaGATCCCTGAAACTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ESLLDRNLEGRRVPSHQQGQRGF*IPETPV Trigger: AACTGGAGTTTCAGGGATCCAAAAGCCTCTTTGGCC...TTGCTGGTGGGATGGGACTCGCCTGCCCTCGAGGTTCCTATCCAGCAAGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CAA 90 bp | TGGGGTTACGGGCAGGTGCTACTAGGCCCAGCTGTTTCCTCATTTTaGGAGCTCTTACGGCACTGTGAACAGTCAGGAGCTGCACCATTC | + |
|
Preference number: 2 (lower is better) Translates to: WGYGQVLLGPAVSSF*ELLRHCEQSGAAPF Trigger: GAATGGTGCAGCTCCTGACTGTTCACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAGCTGGGCCTAGTAGCACCTGCCCGTAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR CAA 90 bp | GATGTCCCCCACAGGCTCCATGCTTGGATGCTTTGTCCCCAGGTTTaGGCACTGTTTGGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DVPHRLHAWMLCPQV*ALFGCVWEMLPCWK Trigger: CTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCATGGAGCCTGTGGGGGACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATGGTCTCTGAAGGCAGCTGTGCACCTGAGATTTaGGTGCAGGGCGCATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGQLAFMCSTTAMVSEGSCAPEI*VQGASG Trigger: TCCAGATGCGCCCTGCACTCAAATCTCAGGTGCACA...GCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCCGAGGGCCTTGTAAATaGGGAGCAAGCACTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RCLHSHSPRASAISREQTRGPCK*GASTLL Trigger: CAGCAGAGTGCTTGCTCCTCATTTACAAGGCCCTCG...GGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAATCCTCACCACACCCTCTAACAACGGGCACTCCCCGATGACACTGCCAAGTCTCCTCAGCAGATaGTTACACTCACACTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: HRILTTPSNNGHSPMTLPSLLSR*LHSHSP Trigger: GGGAGAGTGTGAGTGTAAGCATCTGCTGAGGAGACT...TGGCAGTGTCATCGGGGAGTGCCCGTTGTTAGAGGGTGTGGTGAGGATTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCTTGCTGGATAGGAACCTCGAGGGCAGGCGAGTCCCATCCCACCAGCAATTTTTCCATGGTATCTaGTTCAGTTCCTGCCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ESLLDRNLEGRRVPSHQQFFHGI*FSSCLQ Trigger: CTGGAGGCAGGAACTGAAGCAGATACCATGGAAAAA...TTGCTGGTGGGATGGGACTCGCCTGCCCTCGAGGTTCCTATCCAGCAAGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATGGTCTCTGAAGGCAGCACGGAAGAGTGTGACTaGGGACATGCGGACACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGQLAFMCSTTAMVSEGSTEECD*GHADTK Trigger: TTTGGTGTCCGCATGTCCCCAGTCACACTCTTCCGT...GCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATGAGAGCATCACTCCAACACCAGTACCTGGAAGTCTGGGTTTGGTCCTTGGCATTTGTGAGGGGCTaGGTATTCCTGAGCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GMRASLQHQYLEVWVWSLAFVRG*VFLSSA Trigger: AGCACTGCTCAGGAATACCCAGCCCCTCACAAATGC...CAAGGACCAAACCCAGACTTCCAGGTACTGGTGTTGGAGTGATGCTCTCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTTGCTGGGTGTGCTGGTaGTCGTGCCTGCGATTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TFSGSVGPFFCQELFTLSCWVCW*SCLRFQ Trigger: CTGGAATCGCAGGCACGACCACCAGCACACCCAGCA...AGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| 3UTR CAA 90 bp | CTTTGTCCCCAGGTTTTGGCACTGTTTGGCTGTGTTTGGGAGATGTaGCCTTGCTGGAAGTACATCATGGGTGCCGGCTGTGACGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LCPQVLALFGCVWEM*PCWKYIMGAGCDVS Trigger: TGAAACGTCACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTTGTCACCTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCGGTATTCCTGAGCAGTaGTCAACCGAACTCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGCHLDNVWNQLKPKQLGGIPEQ*STELRS Trigger: GGACCTGAGTTCGGTTGAGCACTGCTCAGGAATACC...GCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR-3UTR GCA 90 bp | AGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCAGTCTCCTCAGCAGATaGTTACACTCACACTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RCLHSHSPRASAISREQTSLLSR*LHSHSP Trigger: GGGAGAGTGTGAGTGTAAGCATCTGCTGAGGAGACT...GGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTTTCACACAGCTCCCGCCGCAGGGTCAGCAGCCTCTGCCAAAAACACAACTGTTTCCTCATTTTTaGAGCTCTTACGGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QLFTQLPPQGQQPLPKTQLFPHF*SSYGTV Trigger: CACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAG...TTGTGTTTTTGGCAGAGGCTGCTGACCCTGCGGCGGGAGCTGTGTGAAAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTGTATACTCCAGACCCTaGGCTCCACCCCAAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RGISSKSLFYSKKGPRAVVYSRP*APPQAV Trigger: CACTGCTTGGGGTGGAGCCCAGGGTCTGGAGTATAC...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR CAA 90 bp | TTTGGGATACTCGATGGCTTATCTTGGTTGTCACCTCGACAACGTTaGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTGCGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FGILDGLSWLSPRQR*EPTKTQAAGHTCEG Trigger: TCCCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAGTATCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CAA 90 bp | TTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTaGTCTGCCAGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSGSVGPFFCQELFT*SASFTESTVSSIER Trigger: CCTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
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| 3UTR CAA 90 bp | ACAGGCTCCATGCTTGGATGCTTTGTCCCCAGGTTTTGGCACTGTTaGGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGTACATCATGG | + |
|
Preference number: 2 (lower is better) Translates to: TGSMLGCFVPRFWHC*AVFGRCCLAGSTSW Trigger: CCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCATGGAGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTGGCCACGGAAGAGTGTaGCTGGGGACATGCGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: TQAVVITAELCFLVYCCFGHGRV*LGTCGH Trigger: GTGTCCGCATGTCCCCAGTCACACTCTTCCGTGGCC...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR-3UTR TCA 90 bp | GTAACTGGTAATCTACTGACCACTGTGCCAGCCCCACGACTTTTCATTTCATACGCAAGTGAGGCTTGCTaGAACCATGCGCCAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: VTGNLLTTVPAPRLFISYASEAC*NHAPGL Trigger: CAGTCCTGGCGCATGGTTTCAGCAAGCCTCACTTGC...GTATGAAATGAAAAGTCGTGGGGCTGGCACAGTGGTCAGTAGATTACCAGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATGCACACACACACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGTTACTGTTGTATTTAACAAACTaGAAGACCGCGCTAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ACTHTHTRAWAVGERQLLLYLTN*KTALAL Trigger: CAAAGCTAGCGCGGTCTTTCAGTTTGTTAAATACAA...CAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGCTTGCTGGATAGGAACCTCGAGGGCAGGCGAGTCCCATCCCACCAGCAACAGTTTCTTACATTTTaGTACCTTGAGAGGAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ESLLDRNLEGRRVPSHQQQFLTF*YLERSK Trigger: CTTACTCCTCTCAAGGTATCAAAATGTAAGAAACTG...TTGCTGGTGGGATGGGACTCGCCTGCCCTCGAGGTTCCTATCCAGCAAGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTCACCTTGTCTGCCAGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGCAGGAAGACAGAATCTaGAGAGAAGAAGGGGACCGT | + |
|
Preference number: 2 (lower is better) Translates to: AIHLVCQLHRVYGFQHREQEDRI*REEGDR Trigger: ACGGTCCCCTTCTTCTCTTCAGATTCTGTCTTCCTG...CTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR-3UTR TCA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTGAACCCACAGCCCCATaGTACCTTCCTTGGCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: RGISSKSLFYSKKGPRAVEPTAP*YLPWHE Trigger: CTCATGCCAAGGAAGGTATCATGGGGCTGTGGGTTC...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATGGTCTCTGAAGGCAGCTTCTGGATCACTCACTaGACAGAATCCTCACCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LGQLAFMCSTTAMVSEGSFWITH*TESSPH Trigger: GTGTGGTGAGGATTCTGTGCAGTGAGTGATCCAGAA...GCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCGGGGTTCTGGATCACTCACTGCACAGAATCCTCACCACACCCTCTAACACAGAGGAGCTGTGATTaGAGACATCTAAGGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NPGFWITHCTESSPHPLTQRSCD*RHLRPG Trigger: TCCTGGCCTTAGATGTCTCCAATCACAGCTCCTCTG...TGTTAGAGGGTGTGGTGAGGATTCTGTGCAGTGAGTGATCCAGAACCCCGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTCACCTTGTCTGCCAGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGACACAAATGGTGAGCTaGGGGTGTTCTCAAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AIHLVCQLHRVYGFQHRETQMVS*GCSQSC Trigger: GCAGCTTTGAGAACACCCCCAGCTCACCATTTGTGT...CTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAACCAAACCCAGGGTTAACACACTTGTTAGATCCTAAGTTACACCCCGGCGACAGCTATGGTCTCTaGAGGCAGCAGGCCGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: MKPNPGLTHLLDPKLHPGDSYGL*RQQAVF Trigger: AAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTC...GCCGGGGTGTAACTTAGGATCTAACAAGTGTGTTAACCCTGGGTTTGGTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCAATGATGTCAAAAGGTaGCCAGACCTGCTGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: PKSSLQVTLEFQSVPQRSNDVKR*PDLLGT Trigger: TGTGCCCAGCAGGTCTGGTCACCTTTTGACATCATT...GCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTTGGGTGCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATGGCAGTCATCACTGCAGAACTGTaGTTTCTGGTTTATTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: MVGCSGVPDQGRVTFMAVITAEL*FLVYCC Trigger: ACAACAATAAACCAGAAAGCACAGTTCTGCAGTGAT...GACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTTGGGGACGGCTGCGAAGAGAGCAAGCAGAGAACTCTaGAACAGGAAAACAAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FTESTVSSIERLGTAAKRASREL*NRKTRN Trigger: ATTCCTTGTTTTCCTGTTGCAGAGTTCTCTGCTTGC...TCTCTTCGCAGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTGCGAGGGTTTACAAGTTACCCTaGAATTTCAGTCAGTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LDNVWNQLKPKQLGTPARVYKLP*NFSQCH Trigger: GTGGCACTGACTGAAATTCCAGGGTAACTTGTAAAC...CCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR CCA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGAGTGCTTTTCACAAGTTaGCCTGTTCCTCAGGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: APGLEAFISKSLLKTRKGVLFTS*PVPQAN Trigger: GTTGGCCTGAGGAACAGGCCAACTTGTGAAAAGCAC...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTACAGGAAGGAGCCTCTaGGGACAAGATGATGGGATA | + |
|
Preference number: 2 (lower is better) Translates to: TFSGSVGPFFCQELFTLSTGRSL*GQDDGI Trigger: TATCCCATCATCTTGTCCCCAGAGGCTCCTTCCTGT...AGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR TCA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTGCAGATCATCTATTCTaGGCCATTCCTCTGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGISSKSLFYSKKGPRAVADHLF*AIPLLE Trigger: TTCCAGCAGAGGAATGGCTCAGAATAGATGATCTGC...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGCTGGTGTTAATCTGGACCATCGTAAGTATGGTTACTTaGGAACCTCACACATCACAC | + |
|
Preference number: 2 (lower is better) Translates to: MVRPSHLLSSPLVLIWTIVSMVT*EPHTSH Trigger: GTGTGATGTGTGAGGTTCTCAAGTAACCATACTTAC...GATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAGTGACTAGGCCTGACCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCTTGTGTAGCTCAAGCTaGCTTGAAACTCACCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PKSSLQVTLEFQSVPQRSLCSSS*LETHQQ Trigger: TTGCTGGTGAGTTTCAAGTCAGCTTGAGCTACACAA...GCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTAGCCGTTGTGATCACTaGAGAACTGTGCTTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RGISSKSLFYSKKGPRAVSRCDH*RTVLSG Trigger: ACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCT...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGCATCTAAGGCCAGGATaGAAACTGGGAGCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: PHASRCDHCRTVLSGLLLHLRPG*KLGAES Trigger: TGATTCTGCTCCCAGTTTCCATCCTGGCCTTAGATG...CAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCCTGTTTCCTCATTTTTaGAGCTCTTACGGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PKSSLQVTLEFQSVPQRSLFPHF*SSYGTV Trigger: CACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAG...GCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTTAATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGATAAAGGTCAGCCCTaGGTCAGGATAGAAAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GVNLDHHLQWFCRTFLLPDKGQP*VRIERR Trigger: CCTTCTTTCTATCCTGACCCAGGGCTGACCTTTATC...TGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CAA 90 bp | CTCAAACCTGATGCTGGATTTGGGATACTCGATGGCTTATCTTGGTaGTCACCTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LKPDAGFGILDGLSW*SPRQRLEPTKTQAA Trigger: AGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAGTATCCCAAATCCAGCATCAGGTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CAA 90 bp | ATTAGAGATCTGCCTGCCCTTGTCTCCAGAGTGCTAGGATTAGAGTaGTGTGTCACCATGCCCAGAGAAGAAATGAAAACAAGCAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: IRDLPALVSRVLGLE*CVTMPREEMKTSKQ Trigger: CTGCTTGCTTGTTTTCATTTCTTCTCTGGGCATGGTGACACACAACTCTAATCCTAGCACTCTGGAGACAAGGGCAGGCAGATCTCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CAA 90 bp | TCAGACAAGTTTATGTGTGAAAACCAAACAAAACTTTCTGGCATGTaGCTGGGTGTGCTGGTGGTCGTGCCTGCGATTCCAGAATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SDKFMCENQTKLSGM*LGVLVVVPAIPEFR Trigger: CCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAAAGTTTTGTTTGGTTTTCACACATAAACTTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCTTCCTTCTCCTTATGAGAACAGTTCAGAAGAGGCTGTGATATTGCATCTGAGGAGGAAAAGCAAGTaGGGCTTGCTGAAACCATGC | + |
|
Preference number: 2 (lower is better) Translates to: GLPSPYENSSEEAVILHLRRKSK*GLLKPC Trigger: GCATGGTTTCAGCAAGCCTCACTTGCTTTTCCTCCT...CAGATGCAATATCACAGCCTCTTCTGAACTGTTCTCATAAGGAGAAGGAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGCTGGTGTTAATCTGGACCATCTCACGATGTTTTATTTaGAGAAATCCCGCCACACAA | + |
|
Preference number: 2 (lower is better) Translates to: MVRPSHLLSSPLVLIWTISRCFI*RNPATQ Trigger: TTGTGTGGCGGGATTTCTTCAAATAAAACATCGTGA...GATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAGTGACTAGGCCTGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTGGCCAGGATGGAAACTaGGAGCAGAATCACCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TQAVVITAELCFLVYCCFGQDGN*EQNHLT Trigger: AGTGAGGTGATTCTGCTCCCAGTTTCCATCCTGGCC...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTTTATCCTTGAACTCCTaGTCTTCCTGGCTGCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: TQAVVITAELCFLVYCCFLSLNS*SSWLHP Trigger: GGGATGCAGCCAGGAAGATCAGGAGTTCAAGGATAA...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCATGAGAGCATCACTCCAACACCAGTACCTGGAAGTCTGGGTTTGGTCCTTAGCAGCAACGGGTTCTaGAGTTATTTGTTAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: WHESITPTPVPGSLGLVLSSNGF*SYLLNE Trigger: TTCATTTAACAAATAACTTCAGAACCCGTTGCTGCT...AAGGACCAAACCCAGACTTCCAGGTACTGGTGTTGGAGTGATGCTCTCATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAACAAGAATCATAGTGGTTTAAGTCTGGAAATTACATTCAGCAGCAACGGGACGGAAGAGTGTGACTaGGGACATGCGGACACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QNKNHSGLSLEITFSSNGTEECD*GHADTK Trigger: TTTGGTGTCCGCATGTCCCCAGTCACACTCTTCCGT...CCCGTTGCTGCTGAATGTAATTTCCAGACTTAAACCACTATGATTCTTGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR TCA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGACGCGCTAGCTTTGATTaGAACAGAACAAGAATCATA | + |
|
Preference number: 2 (lower is better) Translates to: APGLEAFISKSLLKTRKGRASFD*NRTRII Trigger: TATGATTCTTGTTCTGTTTCAATCAAAGCTAGCGCG...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR CAA 90 bp | GGGACTATGGGACTGAGCCAGGGCACTCAGCTGTTATTTCCTACCTaGGAAATTCATGTATGTGAGTTGCTAACACAGTACTTTATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GTMGLSQGTQLLFPT*EIHVCELLTQYFIS Trigger: TGAAATAAAGTACTGTGTTAGCAACTCACATACATGAATTTCCAAGGTAGGAAATAACAGCTGAGTGCCCTGGCTCAGTCCCATAGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGAATTCTGGCTTGTGCCACCACATCTGCACAGCAGCATATTTGTAATACTGTTAAGAAAAATAAATaGCAGGGGAGGCAAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGILACATTSAQQHICNTVKKNK*QGRQDG Trigger: ACCATCTTGCCTCCCCTGGCATTTATTTTTCTTAAC...AGTATTACAAATATGCTGCTGTGCAGATGTGGTGGCACAAGCCAGAATTCCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGATAGGAAAGCAGCTAGAACTGAGTCAGACAAGTTTATGTGTGAAAACCAACTCTTATTAGAGATCTaGCTGCCCTTGTCTCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EDRKAARTESDKFMCENQLLLEI*LPLSPE Trigger: CTCTGGAGACAAGGGCAGGCAGATCTCTAATAAGAG...TTGGTTTTCACACATAAACTTGTCTGACTCAGTTCTAGCTGCTTTCCTATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTAATGGAAGATGTGTATaGCAACACATCTTAACTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RGISSKSLFYSKKGPRAVNGRCV*QHILTS Trigger: GCTAGTTAAGATGTGTTGGCATACACATCTTCCATT...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| 3UTR-3UTR CCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTCTGTTTCCTCATTTTTaGAGCTCTTACGGCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TQAVVITAELCFLVYCCFLFPHF*SSYGTV Trigger: CACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAG...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGGCAATCAAAAGAATTTCATACAACAGGAAGCAGGCACTTTTCCAATACATCTAAGGCCAGGATaGAAACTGGGAGCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: PRGNQKNFIQQEAGTFPIHLRPG*KLGAES Trigger: TGATTCTGCTCCCAGTTTCCATCCTGGCCTTAGATG...TATTGGAAAAGTGCCTGCTTCCTGTTGTATGAAATTCTTTTGATTGCCTCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
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| 3UTR CAA 90 bp | GCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTaGTTTTTAGATAAAGAAGAGTCTGACTTAGTCTTTGTTTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: ASRCDHCRTVLSGLL*FLDKEESDLVFVYP Trigger: AGGATAAACAAAGACTAAGTCAGACTCTTCTTTATCTAAAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
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| 3UTR CAA 90 bp | ATCACAGGTAATTATCAAGAAATGAAAGACACTCTGGAGTCAATTTaGTATCTGCTTTTATGCAATGAAGCCATAGTCAGGGAGCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: ITGNYQEMKDTLESI*YLLLCNEAIVREHA Trigger: TGCATGCTCCCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGACTCCAGAGTGTCTTTCATTTCTTGATAATTACCTGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAATTTTGTATCTGCTTTTATGCAATGAAGCCATAGTCAGGGAGCATGCATATTGCCCAATAAAGTACTaGGTAATTGTCCTAAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SILYLLLCNEAIVREHAYCPIKY*VIVLRS Trigger: ACTTCTTAGGACAATTACCCAGTACTTTATTGGGCA...ATATGCATGCTCCCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
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| 3UTR GCA 72 bp | TCAAGATGCGAGGCCTGGGCTTCTCTCAGGCGGCCATaGTCCCCTGGCCATGGATTCTTACCCTCAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SRCEAWASLRRP*SPGHGFLPSGT Trigger: GGTTCCTGAGGGTAAGAATCCATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCATCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | CTCGTCCTCCCTCTGTTCCATGTGTGTGGTTCAAGATaGGAGGCCTGGGCTTCTCTCAGGCGGCCATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLPLFHVCGSR*EAWASLRRPCS Trigger: GGAGCATGGCCGCCTGAGAGAAGCCCAGGCCTCGCATCTTGAACCACACACATGGAACAGAGGGAGGACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | GGCATGCACACACACACACACCAGGGCATGGGCTGTTaGGGAGAGGCAGTTACTGGCTGGGTGGGTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GMHTHTHQGMGC*GEAVTGWVGLT Trigger: AGTCAGACCCACCCAGCCAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | TGCGTAAGGTACAACCAAGCTGCAGCTGAAGATGGTTaGGTGCTCTGGTGTCCCGGACCAGGGCAGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CVRYNQAAAEDG*VLWCPGPGQGH Trigger: GTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCATCTTCAGCTGCAGCTTGGTTGTACCTTACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | CTGGGCTTCTCTCAGGCGGCCATGCTCCCCTGGCCATaGATTCTTACCCTCAGGAACCATAAGCCACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGFSQAAMLPWP*ILTLRNHKPHR Trigger: TCTGTGTGGCTTATGGTTCCTGAGGGTAAGAATCCATGGCCAGGGGAGCATGGCCGCCTGAGAGAAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCTGGTGGTCGTGCCTGCGATTCCAGAATTCAGGAGGGTGAGACAGGAGGAGCTGGGAATTCTGGCTaGTGCCACCACATCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: CAGGRACDSRIQEGETGGAGNSG*CHHICT Trigger: TGTGCAGATGTGGTGGCACAAGCCAGAATTCCCAGC...TCCTCCTGTCTCACCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | TTTATGGTGCTGGGGACCGAGCGAGGGCCTTGTAAATaGGGAGCAAGCACTCTGCTGCTGAGCTACACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FMVLGTERGPCK*GASTLLLSYTL Trigger: GAGGGTGTAGCTCAGCAGCAGAGTGCTTGCTCCTCATTTACAAGGCCCTCGCTCGGTCCCCAGCACCATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | TGTGGGGAGGGTAGTGTCAGAGCAGCCAAGCTCCCGTaGCTGTTGCTACTGATGAGGGCACTTACAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: CGEGSVRAAKLP*LLLLMRALTAC Trigger: GCATGCTGTAAGTGCCCTCATCAGTAGCAACAGTCACGGGAGCTTGGCTGCTCTGACACTACCCTCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | ATGCCAGGGGAGGCAAGATGGTTCAGTGTGGAAAGGTaGCTGCGGCCAAGCCTGACAACCCAAGTTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: MPGEARWFSVER*LRPSLTTQVLS Trigger: GGATAGAACTTGGGTTGTCAGGCTTGGCCGCAGGCACCTTTCCACACTGAACCATCTTGCCTCCCCTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | GAAGTTAAATTACCTAGACTGGCCGGGCAGTGGTGGTaGACGCCTTTAATCCCAGCACTCGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVKLPRLAGQWW*TPLIPALGRQR Trigger: CCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCACTGCCCGGCCAGTCTAGGTAATTTAACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | TTCTGGCATGTTGCTGGGTGTGCTGGTGGTCGTGCCTaGGATTCCAGAATTCAGGAGGGTGAGACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FWHVAGCAGGRA*DSRIQEGETGG Trigger: TCCTCCTGTCTCACCCTCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | ACACCAGGGCATGGGCTGTTGGGGAGAGGCAGTTACTaGCTGGGTGGGTCTGACTTTAAACTTGCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TPGHGLLGRGSY*LGGSDFKLALM Trigger: CATCAGGGCAAGTTTAAAGTCAGACCCACCCAGCCAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | GCCGCACCTCCTGGCGGTGACCCACATAAAAGGACTTaGAAGAAGGAAGCTTGTGCTCTCTGTCTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAPPGGDPHKRT*KKEACALCLLA Trigger: GGCAAGCAGACAGAGAGCACAAGCTTCCTTCTTCCAAGTCCTTTTATGTGGGTCACCGCCAGGAGGTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | TATGTCCTTCCTCGTCCTCCCTCTGTTCCATGTGTGTaGTTCAAGATGCGAGGCCTGGGCTTCTCTCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: YVLPRPPSVPCV*FKMRGLGFSQA Trigger: CGCCTGAGAGAAGCCCAGGCCTCGCATCTTGAACCACACACATGGAACAGAGGGAGGACGAGGAAGGACATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | TACAACCAAGCTGCAGCTGAAGATGGTTGGGTGCTCTaGTGTCCCGGACCAGGGCAGGGTCACTTTTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: YNQAAAEDGWVL*CPGPGQGHFYG Trigger: GCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCATCTTCAGCTGCAGCTTGGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | CTGATCCCCAGAGGAGGAAAAGCAAGTGAGGCTTGCTaGAACCATGCGCCAGGACTGGAGGCTTTCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LIPRGGKASEAC*NHAPGLEAFIS Trigger: GGAGATGAAAGCCTCCAGTCCTGGCGCATGGTTTCAGCAAGCCTCACTTGCTTTTCCTCCTCTGGGGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR TCA 72 bp | CTTTCCCGCTGCCAGAGAGGACGTGCAGCAAACCTCTaGTCTGGTAGAGGGAGGAGTACTCCAGGGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSRCQRGRAANL*SGRGRSTPGKE Trigger: TTCTTTCCCTGGAGTACTCCTCCCTCTACCAGATCAGAGGTTTGCTGCACGTCCTCTCTGGCAGCGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | TGGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTaGTCCACCGGAATGCCCAGCTTTTCACACAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WKSMDMPMLSST*STGMPSFSHSS Trigger: GGAGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | GAACTCCTGATCTTCCTGGCTGCATCCCACAAATGTTaGGGTTACGGGCAGGTGCTACTAGGCCCAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELLIFLAASHKC*GYGQVLLGPAV Trigger: AACAGCTGGGCCTAGTAGCACCTGCCCGTAACCCCAACATTTGTGGGATGCAGCCAGGAAGATCAGGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR CCA 72 bp | AATGGTGTGGCTTTGGTGGCATCTCTGACGCAAGGATaGACCTCTCCAGAGCCAGGCATGAGGCTAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: NGVALVASLTQG*TSPEPGMRLDK Trigger: CTTGTCTAGCCTCATGCCTGGCTCTGGAGAGGTCCATCCTTGCGTCAGAGATGCCACCAAAGCCACACCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | CTAACAGGGACCCCAGTGCAAACATGTGCTGTGATCTaGGGCTGGAGTTTTACCTGTAGGCCTGTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LTGTPVQTCAVI*GWSFTCRPVHH Trigger: GTGGTGCACAGGCCTACAGGTAAAACTCCAGCCCCAGATCACAGCACATGTTTGCACTGGGGTCCCTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | GATGGTTCAGTGTGGAAAGGTGCCTGCGGCCAAGCCTaGCAACCCAAGTTCTATCCCTGGGACCCACATAAT | + |
|
Preference number: 3 (lower is better) Translates to: DGSVWKGACGQA*QPKFYPWDPHN Trigger: ATTATGTGGGTCCCAGGGATAGAACTTGGGTTGTCAGGCTTGGCCGCAGGCACCTTTCCACACTGAACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | GTTGCCTTGCTGGAAGTACATCATGGGTGCCGGCTGTaGCGTTTCAAAGTCCTATGTCCTTCCTCGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VALLEVHHGCRL*RFKVLCPSSSS Trigger: GGAGGACGAGGAAGGACATAGGACTTTGAAACGTCACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | AGACACACCCTACTGTGGGCTGAACCCACAGCCCCATaGTACCTTCCTTGGCATGAGAGCATCACTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: RHTLLWAEPTAP*YLPWHESITPT Trigger: TGTTGGAGTGATGCTCTCATGCCAAGGAAGGTATCATGGGGCTGTGGGTTCAGCCCACAGTAGGGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | GGCACAAGCCAGGGAGACCTTTCACGGCTTAACCATTaGGGTTTCCCCAAAGCTTCCAGAGTTGTCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTSQGDLSRLNH*GFPKASRVVLR Trigger: TCTGAGGACAACTCTGGAAGCTTTGGGGAAACCGCAATGGTTAAGCCGTGAAAGGTCTCCCTGGCTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | TGTATTAGCCACGTAGACGCTGGGTTAAGGAAGGTGTaGTGTGTGGTGTCTGGGAGCCTGGTCTTCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CISHVDAGLRKV*CVVSGSLVFLL Trigger: GAGAAGGAAGACCAGGCTCCCAGACACCACACACCACACCTTCCTTAACCCAGCGTCTACGTGGCTAATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAGAGCCAGGCATGAGGCTAGACAAGGTGCTTGCCATCAGCTCCAATGCGCTGTTTCCTCATTTTaGGAGCTCTTACGGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRARHEARQGACHQLQCAVSSF*ELLRHC Trigger: ACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAGC...GCATTGGAGCTGATGGCAAGCACCTTGTCTAGCCTCATGCCTGGCTCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR CAA 90 bp | AGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RCLHSHSPRASAISREQTPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...GGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR TCA 72 bp | GAGTGCAGGGCGCATCTGGAAAACAGATGTCTGTACTaGGCTCCTTCGTGCCAAGATCTGCTACGTGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ECRAHLENRCLY*APSCQDLLRVS Trigger: ACTCACACGTAGCAGATCTTGGCACGAAGGAGCTCAGTACAGACATCTGTTTTCCAGATGCGCCCTGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | GAGGGCCTTGTAAATGAGGAGCAAGCACTCTGCTGCTaGGCTACACCCTCCAGTCCCCACACTTCATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EGLVNEEQALCC*ATPSSPHTSFL Trigger: TAAGAATGAAGTGTGGGGACTGGAGGGTGTAGCTCAGCAGCAGAGTGCTTGCTCCTCATTTACAAGGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | CAATCCTCTGGACTGTCTTCCAAGGGACTATGGGACTaGGCCAGGGCACTCAGCTGTTATTTCCTACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSSGLSSKGLWD*ARALSCYFLPW Trigger: CCAAGGTAGGAAATAACAGCTGAGTGCCCTGGCTCAGTCCCATAGTCCCTTGGAAGACAGTCCAGAGGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | GAGCAAGTAAGAAATCCGGGGTTCTGGATCACTCACTaGACAGAATCCTCACCACACCCTCTAACAACGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EQVRNPGFWITH*TESSPHPLTTG Trigger: GCCCGTTGTTAGAGGGTGTGGTGAGGATTCTGTGCAGTGAGTGATCCAGAACCCCGGATTTCTTACTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | CTGAGCTCCTTCGTGCCAAGATCTGCTACGTGTGAGTaGCTAGAAGACAGTTGTAAGCCAGTGCCTGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LSSFVPRSATCE*LEDSCKPVPAI Trigger: AATGGCAGGCACTGGCTTACAACTGTCTTCTAGGCACTCACACGTAGCAGATCTTGGCACGAAGGAGCTCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | AGGTTTTGGCACTGTTTGGCTGTGTTTGGGAGATGTTaGCTTGCTGGAAGTACATCATGGGTGCCGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RFWHCLAVFGRC*LAGSTSWVPAV Trigger: CACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | TGTGGAATGAAAACTGGCAGCTCTTTAGGGTCTCCCTaGGATTCCAGCACCTGCGCTGAAGAGATGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CGMKTGSSLGSP*DSSTCAEEMSS Trigger: ACTGGACATCTCTTCAGCGCAGGTGCTGGAATCCCAGGGAGACCCTAAAGAGCTGCCAGTTTTCATTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | GCACTGTTTGGCTGTGTTTGGGAGATGTTGCCTTGCTaGAAGTACATCATGGGTGCCGGCTGTGACGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALFGCVWEMLPC*KYIMGAGCDVS Trigger: TGAAACGTCACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | TGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGCCGTGTTTACCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WDNWPLCVPRQL*SLKAAGRVYLH Trigger: GTGAAGGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTGCCAGCTTCACCGAGGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VGPFFCQELFTLSASFTEGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...CTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR TCA 72 bp | TACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCTGTaGTTGGAGACATCTAAGGCCAGGATGGAAACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YPGISVSATEEL*LETSKARMETG Trigger: CCCAGTTTCCATCCTGGCCTTAGATGTCTCCAATCACAGCTCCTCTGTGGCACTGACTGAAATTCCAGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR TCA 72 bp | CTTGACTTAGATCATGTCCAAAGCTTCCTATGGTCATaGGACCCACGAACTCCAGGCTGGGACAACTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LDLDHVQSFLWS*DPRTPGWDNWP Trigger: AGGCCAGTTGTCCCAGCCTGGAGTTCGTGGGTCTCATGACCATAGGAAGCTTTGGACATGATCTAAGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | GACTTGGAAGAAGGAAGCTTGTGCTCTCTGTCTGCTTaGCCGACTCTCTTGGGGCAGATCATCTATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLEEGSLCSLSA*PTLLGQIIYSE Trigger: CTCAGAATAGATGATCTGCCCCAAGAGAGTCGGGCAAGCAGACAGAGAGCACAAGCTTCCTTCTTCCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR GCA 72 bp | CCATGGTATCTGCTTCAGTTCCTGCCTCCAGATTCCTaGCGTGGCTTCTTTCACTGCTGTGGAAGTATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PWYLLQFLPPDS*RGFFHCCGSIS Trigger: GCTTATACTTCCACAGCAGTGAAAGAAGCCACGGCAGGAATCTGGAGGCAGGAACTGAAGCAGATACCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | AGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTaGCAGCTTCACCGAGTCTACGGTTTCCAGCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: RTFLLPGAIHLV*QLHRVYGFQHR Trigger: TCTATGCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| 3UTR GCA 72 bp | GAAAGAAGCAAATGTGGAGGAGAGAGTGTCAGGCACTaGAGTGTAGCTGGTGCTGAGTCTCTTTCTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ERSKCGGESVRH*SVAGAESLSSC Trigger: GCAGCTAGAAAGAGACTCAGCACCAGCTACACTGCAGTGCCTGACACTCTCTCCTCCACATTTGCTTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | CAGAGGAGCTGTGATTGGAGACATCTAAGGCCAGGATaGAAACTGGGAGCAGAATCACCTCACTCCAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QRSCDWRHLRPG*KLGAESPHSRV Trigger: TACTCTGGAGTGAGGTGATTCTGCTCCCAGTTTCCATCCTGGCCTTAGATGTCTCCAATCACAGCTCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR CCA 72 bp | CTGGAATTTCAGTCAGTGCCACAGAGGAGCTGTGATTaGAGACATCTAAGGCCAGGATGGAAACTGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LEFQSVPQRSCD*RHLRPGWKLGA Trigger: TGCTCCCAGTTTCCATCCTGGCCTTAGATGTCTCCAATCACAGCTCCTCTGTGGCACTGACTGAAATTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR CCA 72 bp | GGAGGCAGAGGTAGATCTCAGAGTTCAAGGTCAGCCTaGTTTACGGAGAGTTCCAGGGACCTTAGAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GGRGRSQSSRSA*FTESSRDLREI Trigger: GATTTCTCTAAGGTCCCTGGAACTCTCCGTAAACCAGGCTGACCTTGAACTCTGAGATCTACCTCTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | GTGTTTGGGAGATGTTGCCTTGCTGGAAGTACATCATaGGTGCCGGCTGTGACGTTTCAAAGTCCTATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFGRCCLAGSTS*VPAVTFQSPMS Trigger: GGACATAGGACTTTGAAACGTCACAGCCGGCACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | ACAGGCTCCATGCTTGGATGCTTTGTCCCCAGGTTTTaGCACTGTTTGGCTGTGTTTGGGAGATGTTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TGSMLGCFVPRF*HCLAVFGRCCL Trigger: AAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCATGGAGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | AAAGGACTTGGAAGAAGGAAGCTTGTGCTCTCTGTCTaGTTGCCCGACTCTCTTGGGGCAGATCATCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: KGLGRRKLVLSV*LPDSLGADHLF Trigger: GAATAGATGATCTGCCCCAAGAGAGTCGGGCAAGCAGACAGAGAGCACAAGCTTCCTTCTTCCAAGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR GCA 72 bp | TTGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTaGGAGGGACTTTCCTTGGTTGAAATTCTGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LEPTKTQAAGHT*EGLSLVEILKW Trigger: CCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR GCA 72 bp | TTCCTGCCTCCAGATTCCTGCCGTGGCTTCTTTCACTaGTGTGGAAGTATAAGCCGAATAAGCCCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLPPDSCRGFFH*CGSISRISPFF Trigger: GAAGAAAGGGCTTATTCGGCTTATACTTCCACAGCAGTGAAAGAAGCCACGGCAGGAATCTGGAGGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | TCGATGGCTTATCTTGGTTGTCACCTCGACAACGTTTaGAACCAACTAAAACCCAAGCAGCTGGGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: SMAYLGCHLDNV*NQLKPKQLGTP Trigger: AGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | GGTTTACGGAGAGTTCCAGGGACCTTAGAGAAATCCTaGCACGACAAACCCACCAACCAAAAACCCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GLRRVPGTLEKS*HDKPTNQKPKT Trigger: GGTTTTGGGTTTTTGGTTGGTGGGTTTGTCGTGCCAGGATTTCTCTAAGGTCCCTGGAACTCTCCGTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | CTCTCCGCTGGTGTTAATCTGGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: LSAGVNLDHHLQ*FCRTFLLPGAI Trigger: AATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| 3UTR CCA 72 bp | CCTAGTCACTTACTGTCCTCTCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGTTCTGTAGGACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSHLLSSPLVLI*TITFSGSVGPF Trigger: GAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAGTGACTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| 3UTR CCA 72 bp | CTTTGTCCCCAGGTTTTGGCACTGTTTGGCTGTGTTTaGGAGATGTTGCCTTGCTGGAAGTACATCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCPQVLALFGCV*EMLPCWKYIMG Trigger: ACCCATGATGTACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | TGCTTGGATGCTTTGTCCCCAGGTTTTGGCACTGTTTaGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLDALSPGFGTV*LCLGDVALLEV Trigger: TACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | ACAGGAGGAAACTCAGGTACAGAGAGCTTAGGTAACTaGCGCAAAGTTCCAATGCTAGAAAGTGGTGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: TGGNSGTESLGN*RKVPMLESGGA Trigger: CGCTCCACCACTTTCTAGCATTGGAACTTTGCGTCAGTTACCTAAGCTCTCTGTACCTGAGTTTCCTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | GAGTACTCCAGGGAAAGAAAAGGACAGTTCAGCTTATaGCCGCCAAGAAGACAAGCAAGAGAGCTTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EYSRERKGQFSL*PPRRQARELAG Trigger: TCCAGCAAGCTCTCTTGCTTGTCTTCTTGGCGGTCATAAGCTGAACTGTCCTTTTCTTTCCCTGGAGTACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | GGAGCCAGAGAAGAAGAAAATATGTTATGGCTTGAATaGGGATGTCCCCCACAGGCTCCATGCTTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GAREEENMLWLE*GCPPQAPCLDA Trigger: AGCATCCAAGCATGGAGCCTGTGGGGGACATCCTCATTCAAGCCATAACATATTTTCTTCTTCTCTGGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | AAAACCAAACAAAACTTTCTGGCATGTTGCTGGGTGTaGTGGTGGTCGTGCCTGCGATTCCAGAATTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KTKQNFLACCWV*WWSCLRFQNSG Trigger: TCCTGAATTCTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAAAGTTTTGTTTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | TTATGTGTGAAAACCAAACAAAACTTTCTGGCATGTTaGTGGGTGTGCTGGTGGTCGTGCCTGCGATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCVKTKQNFLAC*WVCWWSCLRFQ Trigger: CTGGAATCGCAGGCACGACCACCAGCACACCCAGCAACATGCCAGAAAGTTTTGTTTGGTTTTCACACATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | CTACTTCCTTTTGGGATTCCAATGTGGAATGAAAACTaGCAGCTCTTTAGGGTCTCCCTGGGATTCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPFGIPMWNEN*QLFRVSLGFQH Trigger: GTGCTGGAATCCCAGGGAGACCCTAAAGAGCTGCCAGTTTTCATTCCACATTGGAATCCCAAAAGGAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | AAGGAACGTTTGAGCAGGATGACAGGAAGGAGCCTCTaGGGACAAGATGATGGGATAGATGCCTGCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KERLSRMTGRSL*GQDDGIDACYF Trigger: AAAATAGCAGGCATCTATCCCATCATCTTGTCCCCAGAGGCTCCTTCCTGTCATCCTGCTCAAACGTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | GATGGAAGGACCGCGTACCGAGATAAAGGTCAGCCCTaGGTCAGGATAGAAAGAAGGAAGACCTTTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DGRTAYRDKGQP*VRIERRKTFSF Trigger: AAAAGAAAAGGTCTTCCTTCTTTCTATCCTGACCCAGGGCTGACCTTTATCTCGGTACGCGGTCCTTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | GCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATaGCAGTCAGTCTTCAAAAGAAAGGTAATGATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALVSRTRAGSLL*QSVFKRKVMIL Trigger: TAAGATCATTACCTTTCTTTTGAAGACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGAGCTGTTTCCTCATTTTaGGAGCTCTTACGGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: APGLEAFISKSLLKTRKGAVSSF*ELLRHC Trigger: ACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAGC...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAAGAGAGCAAACCTCCATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGCACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQESKPPWSGLVTYCPLRTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...GCGGAGAGGACAGTAAGTGACTAGGCCTGACCATGGAGGTTTGCTCTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGAGGTAATGATCTTAGCTaGCACAGTGCTTGGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: APGLEAFISKSLLKTRKGGNDLS*HSAWGV Trigger: AACTCCCCAAGCACTGTGCAAGCTAAGATCATTACC...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGTTTGGCTGGTTTTGAATTaGCCACCTTCTGTGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGISSKSLFYSKKGPRAVWLVLN*PPSVCC Trigger: ACAACACACAGAAGGTGGCAAATTCAAAACCAGCCA...AACTGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR TCA 72 bp | GGCACACCTGCGAGGGACTTTCCTTGGTTGAAATTCTaGAGTGGGAAGACCCATTTAAGTCTGGATGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTPARDFPWLKF*SGKTHLSLDVL Trigger: CAAAACATCCAGACTTAAATGGGTCTTCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR TCA 72 bp | GTAAGCCAGTGCCTGCCATTCACTCTTAACAGAAAGTaGGCAAGTAAGAAATCCGGGGTTCTGGATCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSQCLPFTLNRK*ASKKSGVLDHS Trigger: TGAGTGATCCAGAACCCCGGATTTCTTACTTGCTCACTTTCTGTTAAGAGTGAATGGCAGGCACTGGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | AGCAAGAAAGGCCCAAGAGCAGTTTACAAGTTACCCTaGAATTTCAGTCAGTGCCACAGAGGAGCTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: SKKGPRAVYKLP*NFSQCHRGAVI Trigger: AATCACAGCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGGCCTTTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR CCA 72 bp | ATATGTGTGTGCCAAATATGTGTGCTTTTCACAAGTTaGCCTGTTCCTCAGGCCAACCAATGTCGCCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: ICVCQICVLFTS*PVPQANQCRHL Trigger: TAGGTGGCGACATTGGTTGGCCTGAGGAACAGGCCAACTTGTGAAAAGCACACATATTTGGCACACACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | ACCTGCGAGGGACTTTCCTTGGTTGAAATTCTGAAGTaGGAAGACCCATTTAAGTCTGGATGTTTTGCGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TCEGLSLVEILK*EDPFKSGCFAV Trigger: GACCGCAAAACATCCAGACTTAAATGGGTCTTCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CCA 72 bp | TTAACAGAAAGTGAGCAAGTAAGAAATCCGGGGTTCTaGATCACTCACTGCACAGAATCCTCACCACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTESEQVRNPGF*ITHCTESSPHP Trigger: AGGGTGTGGTGAGGATTCTGTGCAGTGAGTGATCCAGAACCCCGGATTTCTTACTTGCTCACTTTCTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | ACTAAGGCAGGTGGGCTAAGTCTTTTCCTAAGTTTATaGACGAGAACTGTGCACCTGAGATTTGAGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKAGGLSLFLSL*TRTVHLRFECR Trigger: CCTGCACTCAAATCTCAGGTGCACAGTTCTCGTCCATAAACTTAGGAAAAGACTTAGCCCACCTGCCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| 3UTR CCA 72 bp | CCACGAAGACACATCCCACAGGACTTTAGCTGGGAATaGCTAGGGGAGCCAGAGAAGAAGAAAATATGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PRRHIPQDFSWE*LGEPEKKKICY Trigger: ATAACATATTTTCTTCTTCTCTGGCTCCCCTAGCCATTCCCAGCTAAAGTCCTGTGGGATGTGTCTTCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | TGGGCGTCTTCCACTTGGGCTCTGCGTTTCTCAAGATaGTTTCTCTTTACTCCATCTCAGGACTCTCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: WASSTWALRFSR*FLFTPSQDSLY Trigger: ATAAAGAGAGTCCTGAGATGGAGTAAAGAGAAATCATCTTGAGAAACGCAGAGCCCAAGTGGAAGACGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | CATTTTATTCTTGTTGTTTCCAATGATGTCAAAAGGTaGCCAGACCTGCTGGGCACAATAGCGCTGGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HFILVVSNDVKR*PDLLGTIALAC Trigger: ACAGGCCAGCGCTATTGTGCCCAGCAGGTCTGGTCACCTTTTGACATCATTGGAAACAACAAGAATAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | AAACTGCTGACCAAATATGTGTGTGCCAAATATGTGTaGTTTTCACAAGTTGGCCTGTTCCTCAGGCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: KLLTKYVCAKYV*FSQVGLFLRPT Trigger: GGTTGGCCTGAGGAACAGGCCAACTTGTGAAAAGCACACATATTTGGCACACACATATTTGGTCAGCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR GCA 72 bp | CCACATAATGAGAAGAAAGACCCAACTCCTCCATGTTaGTCTAACCTCTATACACACAATCTGCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PHNEKKDPTPPC*SNLYTHNLPLP Trigger: AGGGAGAGGCAGATTGTGTGTATAGAGGTTAGAGCAACATGGAGGAGTTGGGTCTTTCTTCTCATTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | TCACACTTATTTATTAACCCTGGGTGCTGGGAATTCTaGCTTGTGCCACCACATCTGCACAGCAGCATATTT | + |
|
Preference number: 3 (lower is better) Translates to: SHLFINPGCWEF*LVPPHLHSSIF Trigger: AAATATGCTGCTGTGCAGATGTGGTGGCACAAGCCAGAATTCCCAGCACCCAGGGTTAATAAATAAGTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | ACGGCCATCAGTTTGTTGACGTTTTGTTTCTGTAAATaGCCAATGAAGTGCCACTTGATCTCGGGACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAISLLTFCFCK*PMKCHLISGQE Trigger: TTCCTGTCCCGAGATCAAGTGGCACTTCATTGGTCATTTACAGAAACAAAACGTCAACAAACTGATGGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR TCA 72 bp | CTCAGGACTCTCTTTATTATCTTTAGAGCCAGAGACTaGACCCATGGTTCTGCATACACAAAGTGGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LRTLFIIFRARD*THGSAYTKWYH Trigger: GTGGTACCACTTTGTGTATGCAGAACCATGGGTTCAGTCTCTGGCTCTAAAGATAATAAAGAGAGTCCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | AAGCTAAGCAGCCCACACGCAAGCCGTTGTGATCACTaGAGAACTGTGCTTTCTGGTTTATTGTTGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KLSSPHASRCDH*RTVLSGLLLFL Trigger: TAAAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGTGTGGGCTGCTTAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| 3UTR TCA 72 bp | CCACACTTCATTCTTACTATTTCACGATGTTTTATTTaGAGAAATCCCGCCACACAAATGGTGAGCTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PHFILTISRCFI*RNPATQMVSWG Trigger: CCCCCAGCTCACCATTTGTGTGGCGGGATTTCTTCAAATAAAACATCGTGAAATAGTAAGAATGAAGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | CATGTTCTTATAACTTCTGGGATGGGTCTTCTTATTTaGCAAGGACACCAGAATAGCTCACTCTGGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HVLITSGMGLLI*QGHQNSSLWML Trigger: GAGCATCCAGAGTGAGCTATTCTGGTGTCCTTGTCAAATAAGAAGACCCATCCCAGAAGTTATAAGAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | CCTGAGTTCATAGCTAGCCTGAGATATACAGGGAAGTaGAGTTGTCTCCAAAACAAAGCAAGTCAAGTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: PEFIASLRYTGK*SCLQNKASQVE Trigger: TTCGACTTGACTTGCTTTGTTTTGGAGACAACTTCACTTCCCTGTATATCTCAGGCTAGCTATGAACTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | ACACAAGCGGTACCATTTTATTCTTGTTGTTTCCAATaGTGTCAAAAGGTGACCAGACCTGCTGGGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQAVPFYSCCFQ*CQKVTRPAGHN Trigger: ATTGTGCCCAGCAGGTCTGGTCACCTTTTGACATCATTGGAAACAACAAGAATAAAATGGTACCGCTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR TCA 72 bp | AATATATTAAAGAATTATATTGGGTCATCACACTGGTaGATCTTGACGAAGCAGCTCACCAGGAGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NILKNYIGSSHW*ILTKQLTRRLE Trigger: CTCCAGCCTCCTGGTGAGCTGCTTCGTCAAGATTCACCAGTGTGATGACCCAATATAATTCTTTAATATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| 3UTR TCA 72 bp | GAGGTCATCAAAGCTACCTTCAATGAAGATGAACTATaGCTCTTGGCACAGATAAATGACCATGACACAACC | + |
|
Preference number: 3 (lower is better) Translates to: EVIKATFNEDEL*LLAQINDHDTT Trigger: GGTTGTGTCATGGTCATTTATCTGTGCCAAGAGTCATAGTTCATCTTCATTGAAGGTAGCTTTGATGACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR GCA 72 bp | GTGTTTACCTTCACAAAGAGAAATGGAAGATGTGTATaGCAACACATCTTAACTAGCCAGAAGAAGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VFTFTKRNGRCV*QHILTSQKKAP Trigger: TGGAGCCTTCTTCTGGCTAGTTAAGATGTGTTGGCATACACATCTTCCATTTCTCTTTGTGAAGGTAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR GCA 72 bp | TTTCATACAACAGGAAGCAGGCACTTTTCCAATAACTaGCAAACAAGCCAGCTAACACTTCATTTACTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FHTTGSRHFSNN*QTSQLTLHLLF Trigger: AAAGAGTAAATGAAGTGTTAGCTGGCTTGTTTGGCAGTTATTGGAAAAGTGCCTGCTTCCTGTTGTATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCGAACAAGCCGAAATATATTAAAGAATTATATTGGGTCATCACACTGGTTCACGATGTTTTATTaGAAGAAATCCCGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: QYRTSRNILKNYIGSSHWFTMFY*KKSRHT Trigger: TGTGTGGCGGGATTTCTTCAAATAAAACATCGTGAA...CCAGTGTGATGACCCAATATAATTCTTTAATATATTTCGGCTTGTTCGGTATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CCA 72 bp | ATTAATATTGCTTTGCCTTTGCCCCTATTTACTAAATaGACTACGGAGGAACTTTCACTGTTATTTAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: INIALPLPLFTK*TTEELSLLFNQ Trigger: CTGATTAAATAACAGTGAAAGTTCCTCCGTAGTCCATTTAGTAAATAGGGGCAAAGGCAAAGCAATATTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| CDS-3UTR GCA 90 bp | TACAGGGCATGCACACACACACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGCGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YRACTHTHTRAWAVGERQRRATL*WTRSFT Trigger: CGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCG...CTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGCCCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCAGGCATGAGGCTAGACAAGGTGCTTGCCATCAGCTCCAATGCCCCCCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEPGMRLDKVLAISSNAPRATLC*TRSFTA Trigger: GGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCG...GGGGGCATTGGAGCTGATGGCAAGCACCTTGTCTAGCCTCATGCCTGGCTCTGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAACGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRCLHSHSPRASAISREQRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...TTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| 3UTR CAA 72 bp | GGGCATGCACACACACACACACCAGGGCATGGGCTGTaGGGGAGAGGCAGTTACTGGCTGGGTGGGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHAHTHTPGHGL*GRGSYWLGGSD Trigger: GTCAGACCCACCCAGCCAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTTTTGGCACTGTTTGGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGTCGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRFWHCLAVFGRCCLAGSRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...ACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QQMLTLTLSPSLSHLKRAATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...TGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTTGGGGACGGCTGCGAAGAGACGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: FTESTVSSIERLGTAAKRRRATL*WTRSFT Trigger: CGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCG...TCTCTTCGCAGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | TACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCTCCATGGCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YTHTLPEPQPSQESKPPWRATLC*TRSFTA Trigger: GGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCG...CCATGGAGGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPVIHFPSPWSSRNKLQVRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...GACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCCGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RCLHSHSPRASAISREQTRRATL*WTRSFT Trigger: CGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCG...GGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCTCCATCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTLSPSLSHLKRANLHRATLC*TRSFTA Trigger: GGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCG...ATGGAGGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | TATGATGGTGAAGAAATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGACGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YDGEEILSSTFHHRGPRGRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...TCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATTTCTTCACCATCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTGTTGGGATAGAGACACTAGAGTGTACAGGAAGGCTATGCCTTGGTAGCCGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLVGIETLECTGRLCLGSRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...GCTACCAAGGCATAGCCTTCCTGTACACTCTAGTGTCTCTATCCCAACAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | CATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAACGAGCCGGGGTTGGATaGCTGGGAGGTCCCGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHRGPRGISSKSLFYSKKRAGVG*LGGPAA Trigger: GGCCGCGGGACCTCCCAGCCATCCAACCCCGGCTCG...TTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCTTCTGCCAGGAGCTATTCACCTTGTCTGCCAGCTTCACCGAGTCTACCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFLLPGAIHLVCQLHRVYRATLC*TRSFTA Trigger: GGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCG...GTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | TCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: STFHHRGPRGISSKSLFYATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...GTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRGISSKSLFYSKKGPRATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...TCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| 3UTR CAA 72 bp | AGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTaGGGGACGGCTGCGAAGAGAAAGGGGGAAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTESTVSSIER*GTAAKRKGEGS Trigger: GCTCCCTTCCCCCTTTCTCTTCGCAGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGACGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GPRAVYKLPWNFSQCHRGRRATL*WTRSFT Trigger: CGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCG...TCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGAGCCAGGCATGAGGCTAGACAAGGTGCTTGCCATCAGCTCCAATGCCCTGCTCCACCGGAATaGCCAGCTTTTCACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRARHEARQGACHQLQCPAPPE*PAFHTA Trigger: AGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGG...GCATTGGAGCTGATGGCAAGCACCTTGTCTAGCCTCATGCCTGGCTCTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTAATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLIWTITFSGSVGPFFCQATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...CTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | CATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HHRGPRGISSKSLFYSKKATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...TTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| 3UTR CAA 72 bp | TATGGGGATGACAGCGGCGGCACAGACAAGGAACGTTaGAGCAGGATGACAGGAAGGAGCCTCTGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: YGDDSGGTDKER*SRMTGRSLWGQ Trigger: TTGTCCCCAGAGGCTCCTTCCTGTCATCCTGCTCAAACGTTCCTTGTCTGTGCCGCCGCTGTCATCCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR TCA 90 bp | ACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGTTACTGGCTGGGTGGGTCTGTCTGGGTTTGGTCCTTaGCTTAGATCATGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: THQGMGCWGEAVTGWVGLSGFGP*LRSCPK Trigger: CTTTGGACATGATCTAAGTCAAGGACCAAACCCAGA...CAGACCCACCCAGCCAGTAACTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR GCA 90 bp | TATGATGGTGAAGAAATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGACGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YDGEEILSSTFHHRGPRGRRATL*WTRSFT Trigger: CGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCG...TCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATTTCTTCACCATCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CCA 90 bp | CTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTGCGAGGGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDNVWNQLKPKQLGTPARVPRQL*SLKAAG Trigger: GCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAAC...CCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCAGCTTCCTATGGTCATaGGACCCACGAACTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSTFHHRGPRGISSKSLSFLWS*DPRTPG Trigger: GCCTGGAGTTCGTGGGTCTCATGACCATAGGAAGCT...GAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | GGGCAGGTGCTACTAGGCCCAGCTGTTTCCTCATTTTaGGAGCTCTTACGGCACTGTGAACAGTCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVLLGPAVSSF*ELLRHCEQSGA Trigger: AGCTCCTGACTGTTCACAGTGCCGTAAGAGCTCCAAAAATGAGGAAACAGCTGGGCCTAGTAGCACCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR GCA 90 bp | CTACAAAGGCCACGGAAGAGTGTGACTGGGGACATGCGGACACCAAATGAACTACCTGCTCCACCGGAATaGCCAGCTTTTCACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQRPRKSVTGDMRTPNELPAPPE*PAFHTA Trigger: AGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGG...TAGTTCATTTGGTGTCCGCATGTCCCCAGTCACACTCTTCCGTGGCCTTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | TCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTaGTCTGCCAGCTTCACCGAGTCTACGGTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGPFFCQELFT*SASFTESTVSS Trigger: GCTGGAAACCGTAGACTCGGTGAAGCTGGCAGACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCAGCTTCCTATGGTCATaGGACCCACGAACTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRNKLQVPLLQQERPKSSFLWS*DPRTPG Trigger: GCCTGGAGTTCGTGGGTCTCATGACCATAGGAAGCT...GCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGACAACCAAGCTGCAGCTaGAGATGGTTGGGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPRAVYKLPWNFSQCHRGQPSCS*RWLGAL Trigger: CAGAGCACCCAACCATCTTCAGCTGCAGCTTGGTTG...TCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQAVVITAELCFLVYCCFRATLC*TRSFTA Trigger: GGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCG...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPVIHFPSPWSSRNKLQVVPRQL*SLKAAG Trigger: GCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAAC...GACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR TCA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGAGACAGCTATGGTCTCTaGAGGCAGCAGGCCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: APGLEAFISKSLLKTRKGDSYGL*RQQAVF Trigger: AAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTC...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGACAAGCAAGAGAGCTTGCTGGATAGGAACCTCGAGGGCAGGCGAGTCATCACAGAGAAGGCCTaGCTTTGTGCTGAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEDKQESLLDRNLEGRRVITEKA*LCAESF Trigger: AAAACTCTCAGCACAAAGCCAGGCCTTCTCTGTGAT...GACTCGCCTGCCCTCGAGGTTCCTATCCAGCAAGCTCTCTTGCTTGTCTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| 3UTR CAA 72 bp | CTCGATGGCTTATCTTGGTTGTCACCTCGACAACGTTaGGAACCAACTAAAACCCAAGCAGCTGGGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LDGLSWLSPRQR*EPTKTQAAGHT Trigger: GGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CAA 72 bp | CAAGGCCTCCTGAGCCTCTCAAACCTGATGCTGGATTaGGGATACTCGATGGCTTATCTTGGTTGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLSLSNLMLD*GYSMAYLGCHL Trigger: GAGGTGACAACCAAGATAAGCCATCGAGTATCCCAAATCCAGCATCAGGTTTGAGAGGCTCAGGAGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR GCA 90 bp | TCCGGGGTTCTGGATCACTCACTGCACAGAATCCTCACCACACCCTCTAACAACCTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGVLDHSLHRILTTPSNNLDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...GTTGTTAGAGGGTGTGGTGAGGATTCTGTGCAGTGAGTGATCCAGAACCCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGAGCATCACTCCAACACCAGTACCTGGAAGTCTGGGTTTGGTCCTTGGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMRASLQHQYLEVWVWSLDHHLQ*FCRTFL Trigger: AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTC...CAAGGACCAAACCCAGACTTCCAGGTACTGGTGTTGGAGTGATGCTCTCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSSLQVTLEFQSVPQRSPLVLI*TITFSG Trigger: ACCACTGAAGGTGATGGTCCAGATTAACACCAGCGG...GCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGACAGTCAGTAGCATGCTaGAAGTCCATGGACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APGLEAFISKSLLKTRKGQSVAC*KSMDMP Trigger: GGGCATGTCCATGGACTTCCAGCATGCTACTGACTG...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | AGCTTCACCGAGTCTACGGTTTCCAGCATAGAGAGGTaGGGGACGGCCATCAGTTTGTTGACGTTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTESTVSSIER*GTAISLLTFCF Trigger: GAAACAAAACGTCAACAAACTGATGGCCGTCCCCAACCTCTCTATGCTGGAAACCGTAGACTCGGTGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210141.2 |
||
| 3UTR CAA 72 bp | ATGCTTGGATGCTTTGTCCCCAGGTTTTGGCACTGTTaGGCTGTGTTTGGGAGATGTTGCCTTGCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLGCFVPRFWHC*AVFGRCCLAGS Trigger: ACTTCCAGCAAGGCAACATCTCCCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | AATTTCCAGGACATCAAAGTTATAATTCTTCCAAATCAATACCGAACAAGCCGAGCAACGAGCCGGGGTTaGATGGCTGGGAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQDIKVIILPNQYRTSRATSRG*MAGRSR Trigger: GCGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGC...TCGGCTTGTTCGGTATTGATTTGGAAGAATTATAACTTTGATGTCCTGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTTGTCACCTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGCHLDNVWNQLKPKQLGDHHLQ*FCRTFL Trigger: AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTC...GCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCTGTGATTGGAGACATCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVTLEFQSVPQRSCDWRHPLVLI*TITFSG Trigger: ACCACTGAAGGTGATGGTCCAGATTAACACCAGCGG...ATGTCTCCAATCACAGCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAAGGGACCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APGLEAFISKSLLKTRKGPLVLI*TITFSG Trigger: ACCACTGAAGGTGATGGTCCAGATTAACACCAGCGG...TCCCTTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGAAATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCACTTCAATAGCATGCTaGAAGTCCATGGACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEEILSSTFHHRGPRGISTSIAC*KSMDMP Trigger: GGGCATGTCCATGGACTTCCAGCATGCTATTGAAGT...GCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATTTCTTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | CATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGCAGGGTCACTTTTATaGCAGTCAGTAGCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHRGPRGISSKSLFYSKKAGSLL*QSVACW Trigger: CCAGCATGCTACTGACTGCCATAAAAGTGACCCTGC...TTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | CTGCCTGCCCTTGTCTCCAGAGTGCTAGGATTAGAGTaGTGTGTCACCATGCCCAGAGAAGAAATGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPALVSRVLGLE*CVTMPREEMKT Trigger: TGTTTTCATTTCTTCTCTGGGCATGGTGACACACAACTCTAATCCTAGCACTCTGGAGACAAGGGCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR TCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTGACAGCTATGGTCTCTaGAGGCAGCAGGCCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQAVVITAELCFLVYCCFDSYGL*RQQAVF Trigger: AAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTC...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACTTGGAAGAAGGAAGCTTGTGCTCTCTGTCTGCTTGCCCGACTCTCTCTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTWKKEACALCLLARLSLDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...AGAGAGTCGGGCAAGCAGACAGAGAGCACAAGCTTCCTTCTTCCAAGTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR GCA 90 bp | CCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCACTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRGISSKSLFYSKKGPRALDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...TGCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTACTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWTITFSGSVGPFFCQELLDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...TAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGCTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSSRNKLQVPLLQQERPKLDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...CTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRGISSKSLFYSKKGPRDHHLQ*FCRTFL Trigger: AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTC...TCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAACCCATCACCTTCAGTaGTTCTGTAGGACCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRGISSKSLFYSKKGPRTHHLQ*FCRTFL Trigger: AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGGT...TCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211518.2 |
||
| CDS-3UTR GCA 90 bp | TCCGCTGGTGTTAATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAGVNLDHHLQWFCRTFLLDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| CDS-3UTR GCA 90 bp | ATGATGGTGAAGAAATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAACTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MMVKKSCHPLSITVVLEELDHHV*RFCFAD Trigger: GTCAGCAAAACAAAACCTGCAGACATGGTGATCGAG...TTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATTTCTTCACCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| 3UTR CAA 72 bp | AATATGTGTGTGCCAAATATGTGTGCTTTTCACAAGTaGGCCTGTTCCTCAGGCCAACCAATGTCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NMCVPNMCAFHK*ACSSGQPMSPP Trigger: AGGTGGCGACATTGGTTGGCCTGAGGAACAGGCCAACTTGTGAAAAGCACACATATTTGGCACACACATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CAA 72 bp | GGCTTGCATGAACTTGTTTGTGTAGCTCAAGCTGACTaGAAACTCACCAGCAATCCTCTGGACTGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHELVCVAQAD*KLTSNPLDCLP Trigger: TGGAAGACAGTCCAGAGGATTGCTGGTGAGTTTCAAGTCAGCTTGAGCTACACAAACAAGTTCATGCAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| 3UTR CAA 72 bp | GATGCTGGATTTGGGATACTCGATGGCTTATCTTGGTaGTCACCTCGACAACGTTTGGAACCAACTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: DAGFGILDGLSW*SPRQRLEPTKT Trigger: GGTTTTAGTTGGTTCCAAACGTTGTCGAGGTGACAACCAAGATAAGCCATCGAGTATCCCAAATCCAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CCA 90 bp | ACGCAAGCCGTTGTGATCACTGCAGAACTGTGCTTTCTGGTTTATTGTTGTTTTGGAAAGAAGCAAATGTaGAGGAGAGAGTGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQAVVITAELCFLVYCCFGKKQM*RRECQA Trigger: TGCCTGACACTCTCTCCTCCACATTTGCTTCTTTCC...AAAACAACAATAAACCAGAAAGCACAGTTCTGCAGTGATCACAACGGCTTGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | TACAGGCATGTCATGAAGCTCCGTGAAGACACTTTCTaGCTCATGAAGTTCAGAACCCTTCTTGCACGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRHVMKLREDTF*LMKFRTLLARN Trigger: ATTACGTGCAAGAAGGGTTCTGAACTTCATGAGCAAGAAAGTGTCTTCACGGAGCTTCATGACATGCCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| 3UTR CAA 72 bp | CCCACACTTCATTCTTACTATTTCACGATGTTTTATTaGAAGAAATCCCGCCACACAAATGGTGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLHSYYFTMFY*KKSRHTNGELG Trigger: CCCCAGCTCACCATTTGTGTGGCGGGATTTCTTCAAATAAAACATCGTGAAATAGTAAGAATGAAGTGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS-3UTR CCA 90 bp | CAATTCCCAATCCCTTCCAGGAGGGAATTTCCAGGACATCAAAGTTATAATTCTGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFPIPSRREFPGHQSYNSDHHLQ*FCRTFL Trigger: AAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTC...AGAATTATAACTTTGATGTCCTGGAAATTCCCTCCTGGAAGGGATTGGGAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | TACTCTTGCCCAATAAAGTACTGGGTAATTGTCCTAAGAAGTATGACACATACACCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSCPIKYWVIVLRSMTHTPLVLI*TITFSG Trigger: ACCACTGAAGGTGATGGTCCAGATTAACACCAGCGG...TGTATGTGTCATACTTCTTAGGACAATTACCCAGTACTTTATTGGGCAAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTAAATGAAGGATGTGAGGGCTGGAGGAAACAAGCGGAAAAGCTATCAGGATCCTACTTCAATCTGTaGGAAAGAAGCAAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNEGCEGWRKQAEKLSGSYFNL*ERSKCG Trigger: TCCACATTTGCTTCTTTCCCACAGATTGAAGTAGGA...TCCTGATAGCTTTTCCGCTTGTTTCCTCCAGCCCTCACATCCTTCATTTAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| 3UTR CAA 72 bp | AATTATCAAGAAATGAAAGACACTCTGGAGTCAATTTaGTATCTGCTTTTATGCAATGAAGCCATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NYQEMKDTLESI*YLLLCNEAIVR Trigger: CCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGACTCCAGAGTGTCTTTCATTTCTTGATAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
||
| CDS GCA 90 bp | CGGGGTTGGATGGCTGGGAGGTCCCGCGGCCGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACGGCCCGCAGCGCGAACCCGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGWMAGRSRGRRATL*WTRSFTARSANPTP Trigger: GGGAGTCGGGTTCGCGCTGCGGGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCGGCCGCGGGACCTCCCAGCCATCCAACCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033875.10 ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS CCA 90 bp | GGTTGGATGGCTGGGAGGTCCCGCGGCCGCCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCCCGCAGCGCGAACCCGACTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWMAGRSRGRRATLC*TRSFTARSANPTPS Trigger: GCTGGGAGTCGGGTTCGCGCTGCGGGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCGGCCGCGGGACCTCCCAGCCATCCAACC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033875.10 ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCTCTACAAAGGCCACGGAAGAGTGTGACTGGGGACATGCGGACACCAAATCGCAACGAGCCGGGGTaGGATGGCTGGGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SALQRPRKSVTGDMRTPNRNEPG*DGWEVP Trigger: CGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGCG...ATTTGGTGTCCGCATGTCCCCAGTCACACTCTTCCGTGGCCTTTGTAGAGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGATGCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAACGCAACGAGCCGGGGTaGGATGGCTGGGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRCLHSHSPRASAISREQRNEPG*DGWEVP Trigger: CGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGCG...TTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGCATCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
||
| CDS GCA 90 bp | GTAGCATGCTGGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTaGTCCACCGGAATGCCCAGCTTTTCACACAGCTCCCGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VACWKSMDMPMLSST*STGMPSFSHSSRRR Trigger: CCTGCGGCGGGAGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | TACAGGGCATGCACACACACACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGTCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YRACTHTHTRAWAVGERQSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...CTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGCCCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS GCA 90 bp | ATAGCATGCTGGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTaGTCCACCGGAATGCCCAGCTTTTCACACAGCTCCCGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IACWKSMDMPMLSST*STGMPSFSHSSRRR Trigger: CCTGCGGCGGGAGCTGTGTGAAAAGCTGGGCATTCCGGTGGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CAA 90 bp | TACAGGGCATGCACACACACACACACCAGGGCATGGGCTGTTGGGGAGAGGCAGCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRACTHTHTRAWAVGERQPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...CTGCCTCTCCCCAACAGCCCATGCCCTGGTGTGTGTGTGTGTGCATGCCCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS GCA 90 bp | GTGTCCCGGACCAGGGCAGGGTCACTTTTATGGCAGTCAGTAGCATaGTGGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRTRAGSLLWQSVA*WKSMDMPMLSSTCS Trigger: GGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| CDS CCA 90 bp | ACTCCAGGCTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGCCGTGTTTACTGTCCTCTCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPGWDNWPLCVPRQL*SLKAAGRVYCPLRW Trigger: CCAGCGGAGAGGACAGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAGCCTGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
||
| CDS CCA 90 bp | TCCCGGACCAGGGCAGGGTCACTTTTATGGCAGTCAGTAGCATGCTaGAAGTCCATGGACATGCCCATGCTAAGTTCCACCTGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SRTRAGSLLWQSVAC*KSMDMPMLSSTCST Trigger: GGTGGAGCAGGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| CDS CCA 90 bp | TGGTTGGGTGCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATaGCAGTCAGTAGCATGCTGGAAGTCCATGGACATGCCCATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WLGALVSRTRAGSLL*QSVACWKSMDMPML Trigger: TAGCATGGGCATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGCACCCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCGCCAGGACTGGAGGCTTTCATCTCCAAGTCTTTACTAAAAACCAGAAACGCAACGAGCCGGGGTaGGATGGCTGGGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PCARTGGFHLQVFTKNQKRNEPG*DGWEVP Trigger: CGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGCG...TTTCTGGTTTTTAGTAAAGACTTGGAGATGAAAGCCTCCAGTCCTGGCGCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAATCCTCACCACACCCTCTAACAACGGGCACTCCCCGATGACACTGCCATCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HRILTTPSNNGHSPMTLPSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...TGGCAGTGTCATCGGGGAGTGCCCGTTGTTAGAGGGTGTGGTGAGGATTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS TCA 90 bp | TCCCGCCGCAGGGTCAGCAGCCTCTGGAAGTCTGGGTTTGGTCCTTaGCTTAGATCATGTCCAAAGCTTCCTATGGTCATGAGACCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRVSSLWKSGFGP*LRSCPKLPMVMRPT Trigger: CGTGGGTCTCATGACCATAGGAAGCTTTGGACATGATCTAAGTCAAGGACCAAACCCAGACTTCCAGAGGCTGCTGACCCTGCGGCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCTAAGTCTTTTCCTAAGTTTATGGACGAGAACTGTGCACCTGAGATTTCGCAACGAGCCGGGGTaGGATGGCTGGGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGLSLFLSLWTRTVHLRFRNEPG*DGWEVP Trigger: CGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGCG...AAATCTCAGGTGCACAGTTCTCGTCCATAAACTTAGGAAAAGACTTAGCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGAGAGCAAACCTCCATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGCTCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQESKPPWSGLVTYCPLRSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...GCGGAGAGGACAGTAAGTGACTAGGCCTGACCATGGAGGTTTGCTCTCTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| CDS TCA 90 bp | GCTGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATGGTCTCTaGAGGCAGCAGGCCGTGTTTACTGTCCTCTCCGCTGGTGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AGTTGLYVFHDSYGL*RQQAVFTVLSAGVN Trigger: ATTAACACCAGCGGAGAGGACAGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
||
| CDS CCA 90 bp | GAAGGCAGCAGGCCGTGTTTACTGTCCTCTCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGSRPCLLSSPLVLI*TITFSGSVGPFFCQ Trigger: CTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAACACGGCCTGCTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCAAGAGAGCAAACCTCCATGGTCAGGCCTAGTCACTTACTGTCCTCTCCGTCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISREQTSMVRPSHLLSSPSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...CGGAGAGGACAGTAAGTGACTAGGCCTGACCATGGAGGTTTGCTCTCTTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209856.2 ENSMUST00000210141.2 |
||
| CDS-3UTR CAA 90 bp | CTACAAAGGCCACGGAAGAGTGTGACTGGGGACATGCGGACACCAAATGAACTACTAGGGCAGGCTTCTTaGAGTAGTCCCGCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRKSVTGDMRTPNELLGQAS*SSPALQ Trigger: TTGGAGAGCGGGACTACTCAAAGAAGCCTGCCCTAG...TAGTTCATTTGGTGTCCGCATGTCCCCAGTCACACTCTTCCGTGGCCTTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | CTCGACAACGTTTGGAACCAACTAAAACCCAAGCAGCTGGGCACACCTGCGAGGGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDNVWNQLKPKQLGTPARGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...CCTCGCAGGTGTGCCCAGCTGCTTGGGTTTTAGTTGGTTCCAAACGTTGTCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033875.10 |
||
| CDS-3UTR CAA 90 bp | GCTTACACTCACACTCTCCCCGAGCCTCAGCCATCTCAAGAGAGCAAACCTCCAGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AYTHTLPEPQPSQESKPPGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...TGGAGGTTTGCTCTCTTGAGATGGCTGAGGCTCGGGGAGAGTGTGAGTGTAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGACTAGGGCAGGCTTCTTaGAGTAGTCCCGCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPRGISSKSLFYSKKGPRLGQAS*SSPALQ Trigger: TTGGAGAGCGGGACTACTCAAAGAAGCCTGCCCTAG...TCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | TCAATTTTGTATCTGCTTTTATGCAATGAAGCCATAGTCAGGGAGCATGCATATCGCAACGAGCCGGGGTaGGATGGCTGGGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SILYLLLCNEAIVREHAYRNEPG*DGWEVP Trigger: CGGGACCTCCCAGCCATCCAACCCCGGCTCGTTGCG...ATATGCATGCTCCCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGCTGTGATTGGAGACATTCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVTLEFQSVPQRSCDWRHSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...ATGTCTCCAATCACAGCTCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | CATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAATCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HHRGPRGISSKSLFYSKKSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...TTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CAA 90 bp | TCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: STFHHRGPRGISSKSLFYPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...GTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAAGAAATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GEEILSSTFHHRGPRGISPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...GCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATTTCTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCTTCGCGTCTGCTGTCTaGTCTAGGGCAGGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TFHHRGPRGISSKSLFYSFASAV*SRAGFF Trigger: AAAGAAGCCTGCCCTAGACAAGACAGCAGACGCGAA...GCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | TCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACTTCGCGTCTGCTGTCTaGTCTAGGGCAGGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STFHHRGPRGISSKSLFYFASAV*SRAGFF Trigger: AAAGAAGCCTGCCCTAGACAAGACAGCAGACGCGAA...GTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTGTTGGGATAGAGACACTAGAGTGTACAGGAAGGCTATGCCTTGGTAGCCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NLVGIETLECTGRLCLGSPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...GCTACCAAGGCATAGCCTTCCTGTACACTCTAGTGTCTCTATCCCAACAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
||
| CDS CCA 90 bp | TTTACTGTCCTCTCCGCTGGTGTTAATCTGGACCATCACCTTCAGTaGTTCTGTAGGACCTTTCTTCTGCCAGGAGCTATTCACCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTVLSAGVNLDHHLQ*FCRTFLLPGAIHLV Trigger: GACAAGGTGAATAGCTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCAAGAGCAGTTTACAAGTTACCCTGGAATTTCAGTCAGTGCCACAGAGGAGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRAVYKLPWNFSQCHRGGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...TCCTCTGTGGCACTGACTGAAATTCCAGGGTAACTTGTAAACTGCTCTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGAAAGGCCCAAGAGCGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRNKLQVPLLQQERPKSGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...GCTCTTGGGCCTTTCTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGGGGACGGCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: HFPSPWSSRNKLQVPLLQGTAIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGCCGTCCC...CTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS-3UTR CAA 90 bp | ATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCTCTGGAAGTCTGGGTTaGGTCCTTGACTTAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: ILSSTFHHRGPRGISSKSSGSLG*VLDLDH Trigger: ATGATCTAAGTCAAGGACCAAACCCAGACTTCCAGA...GGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
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| CDS-3UTR CAA 90 bp | ATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: ILSSTFHHRGPRGISSKSTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...GGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS-3UTR CAA 90 bp | CTCCATGCTTGGATGCTTTGTCCCCAGGTTTTGGCACTGTTTGGCTGTGTTTGGACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LHAWMLCPQVLALFGCVWTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...CCAAACACAGCCAAACAGTGCCAAAACCTGGGGACAAAGCATCCAAGCATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209525.2 |
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| CDS TCA 90 bp | AGGTTGGGGACGGCCATCAGTTTGTTGACGTTTTGTTTCTGTAAATaGCCAATGAAGTGCCACTTGATCTCGGGACAGGAAGACAGAATA | + |
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Preference number: 5 (lower is better) Translates to: RLGTAISLLTFCFCK*PMKCHLISGQEDRI Trigger: TATTCTGTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGGTCATTTACAGAAACAAAACGTCAACAAACTGATGGCCGTCCCCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000210765.2 |
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| CDS-3UTR CAA 90 bp | AATCCTGTCATCCACTTTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: NPVIHFPSPWSSRNKLQVTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...GACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAAAGTGGATGACAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS-3UTR CAA 90 bp | TTCCATCACCGTGGTCCTCGAGGAATAAGCTCCAAGTCCCTCTTTTACAGCAAGACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: FHHRGPRGISSKSLFYSKTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...CTTGCTGTAAAAGAGGGACTTGGAGCTTATTCCTCGAGGACCACGGTGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033875.10 ENSMUST00000209525.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS-3UTR CAA 90 bp | GCTGGTGTTAATCTGGACCATCACCTTCAGTGGTTCTGTAGGACCTTTCTTCTGGCCTTACCCATCAGTTaGTTGACGTTTTGTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: AGVNLDHHLQWFCRTFLLALPIS*LTFCFC Trigger: ACAGAAACAAAACGTCAACAAACTGATGGGTAAGGC...CAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| CDS-3UTR CAA 90 bp | TCAATTTTGTATCTGCTTTTATGCAATGAAGCCATAGTCAGGGAGCATGCATATTCTGCAGGTTTTGTTTaGCTGACCGCAACGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SILYLLLCNEAIVREHAYSAGFV*LTATSR Trigger: CCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGA...ATATGCATGCTCCCTGACTATGGCTTCATTGCATAAAAGCAGATACAAAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
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| CDS-3UTR CAA 90 bp | TTGTTAAATGAAGGATGTGAGGGCTGGAGGAAACAAGCGGAAAAGCTATCAGGATCTGGAAGTCTGGGTTaGGTCCTTGACTTAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: LLNEGCEGWRKQAEKLSGSGSLG*VLDLDH Trigger: ATGATCTAAGTCAAGGACCAAACCCAGACTTCCAGA...TCCTGATAGCTTTTCCGCTTGTTTCCTCCAGCCCTCACATCCTTCATTTAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
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| CDS TCA 90 bp | AGTTTTGCCTTACCCATCAGTTTGTTGACGTTTTGTTTCTGTAAATaGCCAATGAAGTGCCACTTGATCTCGGGACAGGAAGACAGAATC | + |
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Preference number: 5 (lower is better) Translates to: SFALPISLLTFCFCK*PMKCHLISGQEDRI Trigger: GATTCTGTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGGTCATTTACAGAAACAAAACGTCAACAAACTGATGGGTAAGGCAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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| CDS-3UTR CAA 90 bp | CCAGGACATCAAAGTTATAATTCTTCCAAATCAATACCGAACAAGCCGAAATATCCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: PGHQSYNSSKSIPNKPKYPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...ATATTTCGGCTTGTTCGGTATTGATTTGGAAGAATTATAACTTTGATGTCCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
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| CDS-3UTR CAA 90 bp | AATTTCCAGGACATCAAAGTTATAATTCTTCCAAATCAATACCGAACAAGCCGACCAATGAAGTGCCACTaGATCTCGGGACAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: NFQDIKVIILPNQYRTSRPMKCH*ISGQED Trigger: GTCTTCCTGTCCCGAGATCAAGTGGCACTTCATTGG...TCGGCTTGTTCGGTATTGATTTGGAAGAATTATAACTTTGATGTCCTGGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 |
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| CDS-3UTR CAA 90 bp | CCAGGACATCAAAGTTATAATTCTTCCAAATCAATACCGAACAAGCCGAAATATACGGCCATCAGTTTGTaGACGTTTTGTTTCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: PGHQSYNSSKSIPNKPKYTAISL*TFCFCK Trigger: TTTACAGAAACAAAACGTCAACAAACTGATGGCCGT...ATATTTCGGCTTGTTCGGTATTGATTTGGAAGAATTATAACTTTGATGTCCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098851.12 ENSMUST00000209525.2 |
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| CDS CCA 72 bp | GCTGGGAGGTCCCGCGGCCGCCGCGCCACACTCTGCTaGACTCGCTCGTTCACGGCCCGCAGCGCGAACCCG | + |
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Preference number: 6 (lower is better) Translates to: AGRSRGRRATLC*TRSFTARSANP Trigger: CGGGTTCGCGCTGCGGGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCGGCCGCGGGACCTCCCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033875.10 ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS GCA 72 bp | ATGGCTGGGAGGTCCCGCGGCCGCCGCGCCACACTCTaGTGGACTCGCTCGTTCACGGCCCGCAGCGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: MAGRSRGRRATL*WTRSFTARSAN Trigger: GTTCGCGCTGCGGGCCGTGAACGAGCGAGTCCAGCAGAGTGTGGCGCGGCGGCCGCGGGACCTCCCAGCCAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033875.10 ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS GCA 72 bp | GCGCTGGCCGTGGCCATAGGCCTCGATCACCATGTCTaGAGGTTTTGTTTTGCTGACCGCAACGAGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALAVAIGLDHHV*RFCFADRNEPG Trigger: CCCCGGCTCGTTGCGGTCAGCAAAACAAAACCTGCAGACATGGTGATCGAGGCCTATGGCCACGGCCAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000033875.10 ENSMUST00000098851.12 ENSMUST00000209525.2 ENSMUST00000209856.2 ENSMUST00000210141.2 ENSMUST00000211393.2 ENSMUST00000211518.2 |
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| CDS CCA 72 bp | GCTCTGGTGTCCCGGACCAGGGCAGGGTCACTTTTATaGCAGTCAGTAGCATGCTGGAAGTCCATGGACATG | + |
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Preference number: 6 (lower is better) Translates to: ALVSRTRAGSLL*QSVACWKSMDM Trigger: CATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCTGGTCCGGGACACCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
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| CDS GCA 72 bp | CGGGACAGGAAGACAGAATATAGTTCTCTCCAAAAGTaGGCTGGCCGTGGCCATAGGCCTCGATCACCATGT | + |
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Preference number: 6 (lower is better) Translates to: RDRKTEYSSLQK*AGRGHRPRSPC Trigger: ACATGGTGATCGAGGCCTATGGCCACGGCCAGCGCACTTTTGGAGAGAACTATATTCTGTCTTCCTGTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098851.12 |
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| CDS GCA 72 bp | ACCAGGGCAGGGTCACTTTTATGGCAGTCAGTAGCATaGTGGAAGTCCATGGACATGCCCATGCTAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TRAGSLLWQSVA*WKSMDMPMLSS Trigger: GGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
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| CDS CCA 72 bp | TGGGACAACTGGCCTTTATGTGTTCCACGACAGCTATaGTCTCTGAAGGCAGCAGGCCGTGTTTACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: WDNWPLCVPRQL*SLKAAGRVYCP Trigger: AGGACAGTAAACACGGCCTGCTGCCTTCAGAGACCATAGCTGTCGTGGAACACATAAAGGCCAGTTGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
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| CDS CCA 72 bp | AGGGCAGGGTCACTTTTATGGCAGTCAGTAGCATGCTaGAAGTCCATGGACATGCCCATGCTAAGTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: RAGSLLWQSVAC*KSMDMPMLSST Trigger: GGTGGAACTTAGCATGGGCATGTCCATGGACTTCCAGCATGCTACTGACTGCCATAAAAGTGACCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211393.2 |
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| CDS CCA 72 bp | AGGCCGTGTTTACTGTCCTCTCCGCTGGTGTTAATCTaGACCATCACCTTCAGTGGTTCTGTAGGACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPCLLSSPLVLI*TITFSGSVGPF Trigger: GAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGACAGTAAACACGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033875.10 ENSMUST00000210765.2 ENSMUST00000211393.2 |
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| CDS TCA 72 bp | AGGGTCAGCAGCCTCTGGAAGTCTGGGTTTGGTCCTTaGCTTAGATCATGTCCAAAGCTTCCTATGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: RVSSLWKSGFGP*LRSCPKLPMVM Trigger: CATGACCATAGGAAGCTTTGGACATGATCTAAGTCAAGGACCAAACCCAGACTTCCAGAGGCTGCTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033875.10 ENSMUST00000211393.2 |
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| CDS TCA 72 bp | TTACCCATCAGTTTGTTGACGTTTTGTTTCTGTAAATaGCCAATGAAGTGCCACTTGATCTCGGGACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPISLLTFCFCK*PMKCHLISGQE Trigger: TTCCTGTCCCGAGATCAAGTGGCACTTCATTGGTCATTTACAGAAACAAAACGTCAACAAACTGATGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209856.2 |
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