Pregenerated sensors for PLP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031425Ensembl transcript IDs: ENSMUST00000033800.13, ENSMUST00000113085.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTTTAATTCCAACTCTCAGGAGGCAGGGGCAGGAAGATCTCTATaGGTTCAAGGTCAGCCTTCTCTCCATGGAGAGTTCCAGGACAAC | + |
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Preference number: 1 (lower is better) Translates to: GFNSNSQEAGAGRSL*VQGQPSLHGEFQDN Trigger: GTTGTCCTGGAACTCTCCATGGAGAGAAGGCTGACCTTGAACTCATAGAGATCTTCCTGCCCCTGCCTCCTGAGAGTTGGAATTAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR TCA 90 bp | CCTGAGAACCTTTCCGTTCTGCTCTCCTCAGTTGGAAGTGCCCTTTaGGAAGGAAGCACATCCTGGTCTTCAGGAGATGCTTGCAAAATC | + |
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Preference number: 1 (lower is better) Translates to: PENLSVLLSSVGSAL*EGSTSWSSGDACKI Trigger: GATTTTGCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAGGGCACTTCCAACTGAGGAGAGCAGAACGGAAAGGTTCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 90 bp | TGGAAGTGCCCTTTGAGAAGGAAGCACATCCTGGTCTTCAGGAGATaGTTGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: WKCPLRRKHILVFRR*LQNQLELSLLCDLQ Trigger: CTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAGGGCACTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 90 bp | TACAGGATAAGCCTGAAATCTGGGAGTTCTTTAGGTTTCAAATTCTaGCTGTCCTCTCTGCGGCTCCAGAGCTCTATGGAAGCTTATGAA | + |
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Preference number: 1 (lower is better) Translates to: YRISLKSGSSLGFKF*LSSLRLQSSMEAYE Trigger: TTCATAAGCTTCCATAGAGCTCTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTCCCAGATTTCAGGCTTATCCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR TCA 90 bp | GAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTaGTGGCAAGAAGACCAGGGACATTTCTGCTCTCTACCTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: EFLVLCIKENVFDSY*WQEDQGHFCSLPEN Trigger: GTTCTCAGGTAGAGAGCAGAAATGTCCCTGGTCTTCTTGCCATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 90 bp | AAAAGAGGTACTAAGAGGGAGAGTCCACAGAGAGAGATTAATCACTaGAAGACTCTCCTTTCTTGTTATACTCATCAAGTAAGAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: KRGTKRESPQREINH*KTLLSCYTHQVRRG Trigger: CCCTCTTCTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTGATTAATCTCTCTCTGTGGACTCTCCCTCTTAGTACCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 90 bp | TGGTTTCTTACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTaGTTGTTTACCTTATATATTGGCCCAAGAACAAGTCTCAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: WFLTCPFSSPHSCAS*LFTLYIGPRTSLKC Trigger: ACACTTGAGACTTGTTCTTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR TCA 90 bp | TTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTaGTGCTCCTTAGGTCACAGTCTTATTTCAAATAAGCTAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: FTRRPFQITPLASTN*CSLGHSLISNKLVP Trigger: AGGAACTAGCTTATTTGAAATAAGACTGTGACCTAAGGAGCATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CCA 90 bp | TTTTCTTCTGTCTTCAGTGGAAACAGGAAGGTAAGAGTGAGTTCTTaGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATGGC | + |
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Preference number: 1 (lower is better) Translates to: FSSVFSGNRKVRVSS*FCASKRMYLTPTDG Trigger: GCCATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCTTACCTTCCTGTTTCCACTGAAGACAGAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 90 bp | GATGCTTTCTGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATaGTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: DAFCPVSLSCFQKEL*SKNHPPGLSDTTPN Trigger: GTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCAGAAAGCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CCA 90 bp | GTTCTACAAATGGTAGACTACTTGGGGGAATTCCCAATAATTTCATaGGACCGTACAATTTCAAATATTTTTGTGATGCTTTCTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VLQMVDYLGEFPIIS*DRTISNIFVMLSAQ Trigger: CTGGGCAGAAAGCATCACAAAAATATTTGAAATTGTACGGTCCCATGAAATTATTGGGAATTCCCCCAAGTAGTCTACCATTTGTAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR TCA 90 bp | TTAAAATCAAAATTCTCTATCAGAAATGAAGGAAACACTTGCAGTTaGTTAACTCTCTTTGTACGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LKSKFSIRNEGNTCS*LTLFVRVCVCVCVC Trigger: ACACACACACACACACACACACACACGTACAAAGAGAGTTAATCAACTGCAAGTGTTTCCTTCATTTCTGATAGAGAATTTTGATTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | TGCGACTTGCAGCTGGGGAGTCACCTTCTCAGGCATCCCCCATTTCTAGCAGGAAGAGAGATTAATCACTaGAAGACTCTCCTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: CDLQLGSHLLRHPPFLAGREINH*KTLLSC Trigger: ACAAGAAAGGAGAGTCTTGCAGTGATTAATCTCTCT...TCCTGCTAGAAATGGGGGATGCCTGAGAAGGTGACTCCCCAGCTGCAAGTCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 90 bp | AAGTGCCCTTTGAGAAGGAAGCACATCCTGGTCTTCAGGAGATGCTaGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KCPLRRKHILVFRRC*QNQLELSLLCDLQL Trigger: CAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAGGGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCTTTAGGTTTCAAATTCTGCCTGTCCTCTCTGCGGCTCCAGAGCTCTATATAGTCCATTGCCACTaGCGTCAGAGCTCTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EFFRFQILPVLSAAPELYIVHCH*RQSSLS Trigger: AGAAAGAGAGCTCTGACGCCAGTGGCAATGGACTAT...ATAGAGCTCTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | GCTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCGACCAGGGACATTTCTaGTCTCTACCTGAGAACCTT | + |
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Preference number: 2 (lower is better) Translates to: ASSFLFSAPWKPQGCHGSDQGHF*SLPENL Trigger: AAGGTTCTCAGGTAGAGAGCAGAAATGTCCCTGGTC...GCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAATACAACAGGAGCTGGGGTACCACAACGGCACTGGGTAAGTAAACCATATATTGTGAAGATATTATaGCAGAGGCCAGGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LNTTGAGVPQRHWVSKPYIVKIL*QRPGAR Trigger: TCTGGCCCCTGGCCTCTGGCATAATATCTTCACAAT...ATATGGTTTACTTACCCAGTGCCGTTGTGGTACCCCAGCTCCTGTTGTATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR CCA 90 bp | CTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGAAGGAAGCACATCCTaGTCTTCAGGAGATGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LVPFYSQLLGNHKVVMVAEGSTS*SSGDAC Trigger: GCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTC...AGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATTCTGCGACTTGCAGCTaGGGAGTCACCTTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RVSSWFCASKRMYLTPTDSATCS*GVTFSG Trigger: GCCTGAGAAGGTGACTCCCCAGCTGCAAGTCGCAGA...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 90 bp | ATGGGCTCAATTGATAAACTGGAGATGCTCTCAGCTTCTGAGAGCTaGGAAAGTCCATCTATAGATCCATCCCAGAGGGCAGAACTAAAT | + |
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Preference number: 2 (lower is better) Translates to: MGSIDKLEMLSASES*ESPSIDPSQRAELN Trigger: ATTTAGTTCTGCCCTCTGGGATGGATCTATAGATGGACTTTCCAAGCTCTCAGAAGCTGAGAGCATCTCCAGTTTATCAATTGAGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATGCTCAAAGAATCATCCTCACCCTTCTCCCAGCTaGAGGAGGCAGATTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: CPVSLSCFQKELCSKNHPHPSPS*RRQIWA Trigger: TGCCCAAATCTGCCTCCTGCAGCTGGGAGAAGGGTG...AGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACACTCCTCAGTTGGAAGTaGCCTTTGAGAAGGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KNYAQRIILQVFLIQLQTLLSWK*PLRRKH Trigger: GTGCTTCCTTCTCAAAGGGCACTTCCAACTGAGGAG...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACAGAAGGAAGCACATCCTaGTCTTCAGGAGATGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: KNYAQRIILQVFLIQLQTEGSTS*SSGDAC Trigger: GCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTC...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCTTTAGGTTTCAAATTCTGCCTGTCCTCTCTGCGGCTCCAGAGCTCTATGTAAGAGTGAGTTCTTaGTTTTGTGCATCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EFFRFQILPVLSAAPELYVRVSS*FCASKR Trigger: TCTCTTTGATGCACAAAACCAAGAACTCACTCTTAC...ATAGAGCTCTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 90 bp | AAGGTAAGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTaGACTCCTACTGATGGCAAGAAGACCAGGGACATTTCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KVRVSSWFCASKRMY*TPTDGKKTRDISAL Trigger: GAGAGCAGAAATGTCCCTGGTCTTCTTGCCATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCTTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATCTCCTCAGTTGGAAGTaGCCTTTGAGAAGGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RVSSWFCASKRMYLTPTDLLSWK*PLRRKH Trigger: GTGCTTCCTTCTCAAAGGGCACTTCCAACTGAGGAG...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGGGTAGTACTGTCATTAATGTTTTAATCCTGAACGGGCACAGCATATTTTTAGGTTTCAAATTCTaGCTGTCCTCTCTGCGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VQGSTVINVLILNGHSIFLGFKF*LSSLRL Trigger: GAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAA...AAATATGCTGTGCCCGTTCAGGATTAAAACATTAATGACAGTACTACCCTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | GAGCTAAGAACAATGGGCTCAATTGATAAACTGGAGATGCTCTCAGCTTCTGAGAGAGAGATTAATCACTaGAAGACTCTCCTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: ELRTMGSIDKLEMLSASEREINH*KTLLSC Trigger: ACAAGAAAGGAGAGTCTTGCAGTGATTAATCTCTCT...CTCAGAAGCTGAGAGCATCTCCAGTTTATCAATTGAGCCCATTGTTCTTAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | GTCTTAAAGCCATTCAACCAGACTTACTTGCCGAATATTAATTGTGATAAAGCAAGGGCGAAAGATCCTTaGTTTGACACCCTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VLKPFNQTYLPNINCDKARAKDP*FDTLLP Trigger: TGGGAGAAGGGTGTCAAAGCAAGGATCTTTCGCCCT...TGCTTTATCACAATTAATATTCGGCAAGTAAGTCTGGTTGAATGGCTTTAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATGCTCAAAGAATCATCCTAGGGCGAAAGATCCTTaGTTTGACACCCTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CPVSLSCFQKELCSKNHPRAKDP*FDTLLP Trigger: TGGGAGAAGGGTGTCAAAGCAAGGATCTTTCGCCCT...AGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCTCTTTTCTGTTCAGAGAAAGAAGGTTTATGATGTGGGAGAGAGCTAAGTTCTTCTGTCTTCAGTaGAAACAGGAAGGTAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ESSFLFRERRFMMWERAKFFCLQ*KQEGKS Trigger: ACTCTTACCTTCCTGTTTCCACTGAAGACAGAAGAA...CTTAGCTCTCTCCCACATCATAAACCTTCTTTCTCTGAACAGAAAAGAGCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTATCTTGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCTGCAGGAGGCAGATTTaGGCAAATGCTATATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VKYLAFTRRPFQITPLASCRRQI*ANAILL Trigger: GAGCAATATAGCATTTGCCCAAATCTGCCTCCTGCA...GGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 90 bp | TTTCTTACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTGCTaGTTTACCTTATATATTGGCCCAAGAACAAGTCTCAAGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: FLTCPFSSPHSCASC*FTLYIGPRTSLKCL Trigger: AAGACACTTGAGACTTGTTCTTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGGGTAGTACTGTCATTAATGTTTTAATCCTGAACGGGCACAGCATATTTATAACTTACATGGCCTaGAAGATACATGAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: VQGSTVINVLILNGHSIFITYMA*KIHEHL Trigger: GAGGTGCTCATGTATCTTTCAGGCCATGTAAGTTAT...AAATATGCTGTGCCCGTTCAGGATTAAAACATTAATGACAGTACTACCCTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAAAGCCATTCAACCAGACTTACTTGCCGAATATTAATTGTGATAAAGCAACTGGTATAGGGATCTaGGTTCATCCCAGCATGACA | + |
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Preference number: 2 (lower is better) Translates to: VLKPFNQTYLPNINCDKATGIGI*VHPSMT Trigger: TGTCATGCTGGGATGAACTCAGATCCCTATACCAGT...TGCTTTATCACAATTAATATTCGGCAAGTAAGTCTGGTTGAATGGCTTTAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR-3UTR GCA 90 bp | TCACCCAAAGTTAACAAATACAGGATAAGCCTGAAATCTGGGAGTTCTTTAGGTGCAGATTTGGGCAAATaGTATATTGCTCTGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPKVNKYRISLKSGSSLGADLGK*YIALLA Trigger: TGCTAGCAGAGCAATATAGCATTTGCCCAAATCTGC...ACCTAAAGAACTCCCAGATTTCAGGCTTATCCTGTATTTGTTAACTTTGGGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGGGTAGTACTGTCATTAATGTTTTAATCCTGAACGGGCACAGCATATTTTTTTGTGATGCTTTCTaGCCAGTTTCTCTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: VQGSTVINVLILNGHSIFFCDAF*PVSLSC Trigger: ACAAGAAAGAGAAACTGGGCAGAAAGCATCACAAAA...AAATATGCTGTGCCCGTTCAGGATTAAAACATTAATGACAGTACTACCCTGAAC 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR CAA 90 bp | AAGATACATGAGCACCTCGAGCTAACTATAATTAAGTACCTGTTATaGAGGTCAAATAGAACAATTCACTCAAAGGACACGATGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: KIHEHLELTIIKYLL*RSNRTIHSKDTMFD Trigger: ATCAAACATCGTGTCCTTTGAGTGAATTGTTCTATTTGACCTCAATAACAGGTACTTAATTATAGTTAGCTCGAGGTGCTCATGTATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR TCA 72 bp | TCCAACTCTCAGGAGGCAGGGGCAGGAAGATCTCTATaGGTTCAAGGTCAGCCTTCTCTCCATGGAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: SNSQEAGAGRSL*VQGQPSLHGEF Trigger: GAACTCTCCATGGAGAGAAGGCTGACCTTGAACTCATAGAGATCTTCCTGCCCCTGCCTCCTGAGAGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR TCA 72 bp | CTTTCCGTTCTGCTCTCCTCAGTTGGAAGTGCCCTTTaGGAAGGAAGCACATCCTGGTCTTCAGGAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: LSVLLSSVGSAL*EGSTSWSSGDA Trigger: AGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAGGGCACTTCCAACTGAGGAGAGCAGAACGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR TCA 72 bp | ATGGCAAGAAGACCAGGGACATTTCTGCTCTCTACCTaGGAACCTTTCCGTTCTGCTCTCCTCAGTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: MARRPGTFLLST*EPFRSALLSWK Trigger: CTTCCAACTGAGGAGAGCAGAACGGAAAGGTTCTCAGGTAGAGAGCAGAAATGTCCCTGGTCTTCTTGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCCATTGCCACTGGCGTCAGAGCTCTCTTTCTAAGGGCGAAAGATCCTTGTGTGTGGTTAGAGCCTaGCTATTAGACAAAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: IVHCHWRQSSLSKGERSLCVVRA*LLDKGE Trigger: CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACA...CAAGGATCTTTCGCCCTTAGAAAGAGAGCTCTGACGCCAGTGGCAATGGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 72 bp | AGATGCTTGCAAAATCAATTAGAGCTTTCACTCCTCTaGGACTTGCAGCTGGGGAGTCACCTTCTCAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: RCLQNQLELSLL*DLQLGSHLLRH Trigger: ATGCCTGAGAAGGTGACTCCCCAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR GCA 72 bp | AGCCTGAAATCTGGGAGTTCTTTAGGTTTCAAATTCTaGCTGTCCTCTCTGCGGCTCCAGAGCTCTATGGAA | + |
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Preference number: 3 (lower is better) Translates to: SLKSGSSLGFKF*LSSLRLQSSME Trigger: TTCCATAGAGCTCTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTCCCAGATTTCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCCATTGCCACTGGCGTCAGAGCTCTCTTTCTAAGGGCGAAAGATCCTTGGGTAAGAGTGAGTTCTaGGTTTTGTGCATCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IVHCHWRQSSLSKGERSLGKSEF*VLCIKE Trigger: CTCTTTGATGCACAAAACCAAGAACTCACTCTTACC...CAAGGATCTTTCGCCCTTAGAAAGAGAGCTCTGACGCCAGTGGCAATGGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCTGCAGGAGGCAGATTaGGGCAAATGCTATATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PFYSQLLGNHKVVMVAVILQEAD*GKCYIA Trigger: AGCAATATAGCATTTGCCCAAATCTGCCTCCTGCAG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR GCA 72 bp | CCTTTGAGAAGGAAGCACATCCTGGTCTTCAGGAGATaGTTGCAAAATCAATTAGAGCTTTCACTCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLRRKHILVFRR*LQNQLELSLLC Trigger: GCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACACGAAAGATCCTTGCTTaGACACCCTTCTCCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KNYAQRIILQVFLIQLQTRKILA*TPFSQL Trigger: CAGCTGGGAGAAGGGTGTCAAAGCAAGGATCTTTCG...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAGTATCTTGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCGGCTTAAATAGTCCATaGCCACTGGCGTCAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VKYLAFTRRPFQITPLASGLNSP*PLASEL Trigger: GAGCTCTGACGCCAGTGGCAATGGACTATTTAAGCC...GGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATGCTGCCTACAGCTAGTGTCCTTTCTCAGGTTGCTTGTCAGTCACAGCTACAAATGGTAGACTACTaGGGGGAATTCCCAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: NMLPTASVLSQVACQSQLQMVDY*GEFPII Trigger: AATTATTGGGAATTCCCCCAAGTAGTCTACCATTTG...TAGCTGTGACTGACAAGCAACCTGAGAAAGGACACTAGCTGTAGGCAGCATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTAAGAACAATGGGCTCAATTGATAAACTGGAGATGCTCTCAGCTTCTGAGACAGCAGAAAGCACTTaGGGGAATGACAGCACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ELRTMGSIDKLEMLSASETAEST*GNDSTN Trigger: ATTTGTGCTGTCATTCCCCAAAGTGCTTTCTGCTGT...CTCAGAAGCTGAGAGCATCTCCAGTTTATCAATTGAGCCCATTGTTCTTAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGCAAGACTCTCCTTTCTTGTTATACTCATCAAGTAAGAAGAGGGCCAATTGTGTGGTTAGAGCCTaGCTATTAGACAAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLQDSPFLLYSSSKKRANCVVRA*LLDKGE Trigger: CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACA...ATTGGCCCTCTTCTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATGCTTGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAGCTGGGGCAAGACTCTCCTTTCTaGTTATACTCATCAAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCLQNQLELSLLCDLQLGQDSPF*LYSSSK Trigger: CTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTG...CCCCAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAATACAACAGGAGCTGGGGTACCACAACGGCACTGGGTAAGTAAACCATATTCACCTTCCTTGATCTaGATTGGTTTCTTACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNTTGAGVPQRHWVSKPYSPSLI*IGFLHV Trigger: GACATGTAAGAAACCAATCAAGATCAAGGAAGGTGA...ATATGGTTTACTTACCCAGTGCCGTTGTGGTACCCCAGCTCCTGTTGTATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATGCTCAAAGAATCATCCTGGCTTAAATAGTCCATaGCCACTGGCGTCAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CPVSLSCFQKELCSKNHPGLNSP*PLASEL Trigger: GAGCTCTGACGCCAGTGGCAATGGACTATTTAAGCC...AGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR TCA 72 bp | GTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTaGTGGCAAGAAGACCAGGGACATTTCTGCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLCIKENVFDSY*WQEDQGHFCSL Trigger: TAGAGAGCAGAAATGTCCCTGGTCTTCTTGCCATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR GCA 72 bp | ACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTaGTTGTTTACCTTATATATTGGCCCAAGAACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TCPFSSPHSCAS*LFTLYIGPRTS Trigger: ACTTGTTCTTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTGTAAATTCTTATATCTCTTTCAACACAGCAGAAAGCACTTTGGGGAATCTGCAGGAGGCAGATTaGGGCAAATGCTATATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVNSYISFNTAESTLGNLQEAD*GKCYIA Trigger: AGCAATATAGCATTTGCCCAAATCTGCCTCCTGCAG...ATTCCCCAAAGTGCTTTCTGCTGTGTTGAAAGAGATATAAGAATTTACAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAAAGCCATTCAACCAGACTTACTTGCCGAATATTAATTGTGATAAAGCATCTATTCTCAGCTCCTaGGAAACCACAAGGTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLKPFNQTYLPNINCDKASILSS*ETTRLS Trigger: TGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGA...TGCTTTATCACAATTAATATTCGGCAAGTAAGTCTGGTTGAATGGCTTTAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR TCA 72 bp | AGGCCATTTCAAATTACACCTTTAGCATCCACCAACTaGTGCTCCTTAGGTCACAGTCTTATTTCAAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPFQITPLASTN*CSLGHSLISNK Trigger: CTTATTTGAAATAAGACTGTGACCTAAGGAGCATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR CCA 72 bp | TCACTCTTGTGCATCCTGCTTGTTTACCTTATATATTaGCCCAAGAACAAGTCTCAAGTGTCTTCTTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLCILLVYLIY*PKNKSQVSSCK Trigger: TTTACAAGAAGACACTTGAGACTTGTTCTTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR TCA 72 bp | AGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTaGTACAACTCCAAACAAGAGATAAACAATTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RTMLKESSSRSF*YNSKQEINNWE Trigger: TTCCCAATTGTTTATCTCTTGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR CCA 72 bp | ATTCTTATATCTCTTTCAACACAGCAGAAAGCACTTTaGGGAATGACAGCACAAATCTACAATGAAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ILISLSTQQKAL*GMTAQIYNETA Trigger: AGCTGTTTCATTGTAGATTTGTGCTGTCATTCCCCAAAGTGCTTTCTGCTGTGTTGAAAGAGATATAAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAAAGCCATTCAACCAGACTTACTTGCCGAATATTAATTGTGATAAAGCAGTCTTCAGGAGATGCTaGCAAAATCAATTAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLKPFNQTYLPNINCDKAVFRRC*QNQLEL Trigger: AAGCTCTAATTGATTTTGCAAGCATCTCCTGAAGAC...TGCTTTATCACAATTAATATTCGGCAAGTAAGTCTGGTTGAATGGCTTTAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| 3UTR CCA 72 bp | ATGGTAGACTACTTGGGGGAATTCCCAATAATTTCATaGGACCGTACAATTTCAAATATTTTTGTGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: MVDYLGEFPIIS*DRTISNIFVML Trigger: AAGCATCACAAAAATATTTGAAATTGTACGGTCCCATGAAATTATTGGGAATTCCCCCAAGTAGTCTACCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR CCA 72 bp | AAAGATATAGATTATTTCACCTTCCTTGATCTTGATTaGTTTCTTACATGTCCTTTTAGCTCTCCTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDIDYFTFLDLD*FLTCPFSSPHS Trigger: AGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCAAGGAAGGTGAAATAATCTATATCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR GCA 90 bp | AAACACAACACTGTAGGCTGTGTGGTTAGAGCCTTGCTATTAGACAAAGGGGAGGATGCCCACAAACGTTaGGCTCAGGCCCTTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHNTVGCVVRALLLDKGEDAHKR*AQALAA Trigger: TGCGGCAAGGGCCTGAGCGCAACGTTTGTGGGCATC...CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113085.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCGCCAAAGATCTGCCTaGCAGCGCCGGTGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIRQRSA*QRRWCR Trigger: TCTACACCACCGGCGCTGTCAGGCAGATCTTTGGCG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTTGCGCTCAGGCCCTTaGCGCAGATGGTGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSFLFSAPWKPQGCHGSLRSGP*RRWWSC Trigger: ACAAGACCACCATCTGCGGCAAGGGCCTGAGCGCAA...GCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR TCA 90 bp | AAACACAACACTGTAGGCTGTGTGGTTAGAGCCTTGCTATTAGACAAAGGGGAGCAGTCAGGGCATAGGTaGTGCCCACAAACTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KHNTVGCVVRALLLDKGEQSGHR*CPQTCR Trigger: CCGACAAGTTTGTGGGCATCACCTATGCCCTGACTG...CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCAGTCAGGGCATAGGTaGTGCCCACAAACGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIQSGHR*CPQTLR Trigger: GCGCAACGTTTGTGGGCATCACCTATGCCCTGACTG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113085.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACAGCCCCCTGTTACCGTTaGGCTCAGGCCCTTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNYAQRIILQVFLIQLQTAPCYR*AQALAA Trigger: TGCGGCAAGGGCCTGAGCGCAACGGTAACAGGGGGC...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCTTGATGTTGGCCTCTaGAACCCCTCCCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVILDVGL*NPSPSG Trigger: GCCAGAAGGGGAGGGGTTCCAGAGGCCAACATCAAG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCATTGCCACTGGCGTCAGAGCTCTCTTTCTAAGGGCGAAAGATCCTTGGCTTTTCTGTACCAGTaGGAGCTTCATGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: IVHCHWRQSSLSKGERSLAFLYQ*ELHVHI Trigger: GATGTGGACATGAAGCTCTCACTGGTACAGAAAAGC...CAAGGATCTTTCGCCCTTAGAAAGAGAGCTCTGACGCCAGTGGCAATGGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | TGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTGATGGGCCCTTGCCGCAGATaGTGGTCTTGTAGTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CIYPKAISNYTFSIHQLMGPCRR*WSCSRQ Trigger: TTGGCGACTACAAGACCACCATCTGCGGCAAGGGCC...CATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | AACATGCTGCCTACAGCTAGTGTCCTTTCTCAGGTTGCTTGTCAGTCACAGCTAAGATGGACAGAAGGTTaGAGCCACAAACCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMLPTASVLSQVACQSQLRWTEG*SHKPCQ Trigger: CTGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCT...TAGCTGTGACTGACAAGCAACCTGAGAAAGGACACTAGCTGTAGGCAGCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCATCAGCGCAGAGACTaGCTATACTGGCAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIHQRRD*LYWQRS Trigger: AGACCTCTGCCAGTATAGGCAGTCTCTGCGCTGATG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCCCTTGCCGCAGATGGTaGTCTTGTAGTCGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIPCRRW*SCSRQR Trigger: TCTTTGGCGACTACAAGACCACCATCTGCGGCAAGG...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACATTGCGCTCAGGCCCTTaGCGCAGATGGTGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNYAQRIILQVFLIQLQTLRSGP*RRWWSC Trigger: ACAAGACCACCATCTGCGGCAAGGGCCTGAGCGCAA...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | GATTGGTTTCTTACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTGCTTGAGAAACACAATCCAGTaGCCACCAGGGAAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DWFLTCPFSSPHSCASCLRNTIQ*PPGKQR Trigger: CCTTTGCTTCCCTGGTGGCCACTGGATTGTGTTTCT...CAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR CCA 90 bp | CTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGAACACCATACATTCTaGCATCAGCGCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPFYSQLLGNHKVVMVAEHHTF*HQRRDC Trigger: GCAGTCTCTGCGCTGATGCCAGAATGTATGGTGTTC...AGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCGAACACCATACATTCTaGCATCAGCGCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIEHHTF*HQRRDC Trigger: GCAGTCTCTGCGCTGATGCCAGAATGTATGGTGTTC...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCTTGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAGCTGGGGAGGTGGTCCAGGTATTaGAGTAAATGTACACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCLQNQLELSLLCDLQLGRWSRY*SKCTQV Trigger: TACCTGTGTACATTTACTTCAATACCTGGACCACCT...CCCCAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCGGAACTCAGCTGTTTTaGAGATGGACAGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIGTQLF*RWTEGW Trigger: CCAACCTTCTGTCCATCTGCAAAACAGCTGAGTTCC...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGCAAAGGCAGAGTTAAAACACAACACTGTAGGCTGTGTGGTTAGAGCCAGGGAAAGCATTCCATaGGAGAACACCATACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVAKAELKHNTVGCVVRARESIP*ENTIHS Trigger: AGAATGTATGGTGTTCTCCCATGGAATGCTTTCCCT...GGCTCTAACCACACAGCCTACAGTGTTGTGTTTTAACTCTGCCTTTGCCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCTTGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAGCTGGGGAGGGAAAGCATTCCATaGGAGAACACCATACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLQNQLELSLLCDLQLGRESIP*ENTIHS Trigger: AGAATGTATGGTGTTCTCCCATGGAATGCTTTCCCT...CCCCAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| 3UTR CAA 72 bp | TTGAGAAGGAAGCACATCCTGGTCTTCAGGAGATGCTaGCAAAATCAATTAGAGCTTTCACTCCTCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRKHILVFRRC*QNQLELSLLCD Trigger: GTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCTCCTGAAGACCAGGATGTGCTTCCTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR TCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACAGGGAAGGCAATAGACTaGCAGGTGGTCCAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: KNYAQRIILQVFLIQLQTGKAID*QVVQVL Trigger: CAATACCTGGACCACCTGTCAGTCTATTGCCTTCCC...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
||
| CDS-3UTR GCA 90 bp | CTAAATACAACAGGAGCTGGGGTACCACAACGGCACTGGGTAAGTAAACCATATACATCCACAGAACAGTaGCACTCCAAAGAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTTGAGVPQRHWVSKPYTSTEQ*HSKETQ Trigger: TTGTGTTTCTTTGGAGTGGCACTGTTCTGTGGATGT...ATATGGTTTACTTACCCAGTGCCGTTGTGGTACCCCAGCTCCTGTTGTATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATGCTCAAAGAATCATCCTGGCCCTTGCCGCAGATaGTGGTCTTGTAGTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPVSLSCFQKELCSKNHPGPCRR*WSCSRQ Trigger: TTGGCGACTACAAGACCACCATCTGCGGCAAGGGCC...AGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | TCACTGCAAGACTCTCCTTTCTTGTTATACTCATCAAGTAAGAAGAGGGCCAATAGATGGACAGAAGGTTaGAGCCACAAACCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDSPFLLYSSSKKRANRWTEG*SHKPCQ Trigger: CTGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCT...ATTGGCCCTCTTCTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCAGGTGGAAGGTCATTTaGAACTCAGCTGTTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIRWKVI*NSAVLQ Trigger: CTGCAAAACAGCTGAGTTCCAAATGACCTTCCACCT...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | GCTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCGCAGCAATAAACAGGTaGAAGGTCATTTGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFLFSAPWKPQGCHGSAAINR*KVIWNS Trigger: TGAGTTCCAAATGACCTTCCACCTGTTTATTGCTGC...GCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR GCA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATCATCAGCGCAGAGACTaGCTATACTGGCAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVSSWFCASKRMYLTPTDHQRRD*LYWQRS Trigger: AGACCTCTGCCAGTATAGGCAGTCTCTGCGCTGATG...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 72 bp | TGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTGCTaGTTTACCTTATATATTGGCCCAAGAACAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPFSSPHSCASC*FTLYIGPRTSL Trigger: GAGACTTGTTCTTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR TCA 90 bp | TGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTGATGAGGCAGTTCCATAGATaGCATACTGGAAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CIYPKAISNYTFSIHQLMRQFHR*HTGKHE Trigger: TTCATGCTTTCCAGTATGTCATCTATGGAACTGCCT...CATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR GCA 90 bp | TGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTGATGACATCCACAGAACAGTaGCACTCCAAAGAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: CIYPKAISNYTFSIHQLMTSTEQ*HSKETQ Trigger: TTGTGTTTCTTTGGAGTGGCACTGTTCTGTGGATGT...CATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR GCA 90 bp | GTTAAGTATCTTGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCGGAACTCAGCTGTTTTaGAGATGGACAGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKYLAFTRRPFQITPLASGTQLF*RWTEGW Trigger: CCAACCTTCTGTCCATCTGCAAAACAGCTGAGTTCC...GGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATAGAAACACAATCCAGTaGCCACCAGGGAAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSSWFCASKRMYLTPTDRNTIQ*PPGKQR Trigger: CCTTTGCTTCCCTGGTGGCCACTGGATTGTGTTTCT...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | AGATGCTTGCAAAATCAATTAGAGCTTTCACTCCTCTGCGACTTGCAGCTGGGGAGTCCTGGTAGTTTTTaGAGAAATAGGTCTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: RCLQNQLELSLLCDLQLGSPGSF*RNRSQL Trigger: TAATTGAGACCTATTTCTCCAAAAACTACCAGGACT...CCCCAGCTGCAAGTCGCAGAGGAGTGAAAGCTCTAATTGATTTTGCAAGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | TGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTGATGGCAGCAATAAACAGGTaGAAGGTCATTTGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIYPKAISNYTFSIHQLMAAINR*KVIWNS Trigger: TGAGTTCCAAATGACCTTCCACCTGTTTATTGCTGC...CATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR TCA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATGCTTTTCTGTACCAGTaGGAGCTTCATGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RVSSWFCASKRMYLTPTDAFLYQ*ELHVHI Trigger: GATGTGGACATGAAGCTCTCACTGGTACAGAAAAGC...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR TCA 90 bp | TCACTGCAAGACTCTCCTTTCTTGTTATACTCATCAAGTAAGAAGAGGGCCAATAGGCAGTTCCATAGATaGCATACTGGAAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQDSPFLLYSSSKKRANRQFHR*HTGKHE Trigger: TTCATGCTTTCCAGTATGTCATCTATGGAACTGCCT...ATTGGCCCTCTTCTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR TCA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACAAGGTGGTCCAGGTATTaGAGTAAATGTACACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNYAQRIILQVFLIQLQTRWSRY*SKCTQV Trigger: TACCTGTGTACATTTACTTCAATACCTGGACCACCT...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | GATTGGTTTCTTACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTGCTTGAGTCCTGGTAGTTTTTaGAGAAATAGGTCTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: DWFLTCPFSSPHSCASCLSPGSF*RNRSQL Trigger: TAATTGAGACCTATTTCTCCAAAAACTACCAGGACT...CAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| 3UTR CAA 72 bp | TGTCTTCAGTGGAAACAGGAAGGTAAGAGTGAGTTCTaGGTTTTGTGCATCAAAGAGAATGTATTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLQWKQEGKSEF*VLCIKENVFDS Trigger: GGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCTTACCTTCCTGTTTCCACTGAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAGTTTCTCTTTCTTGTTTTCAAAAAGAACTATGCTCAAAGAATCATCCTAGGTGGAAGGTCATTTaGAACTCAGCTGTTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPVSLSCFQKELCSKNHPRWKVI*NSAVLQ Trigger: CTGCAAAACAGCTGAGTTCCAAATGACCTTCCACCT...AGGATGATTCTTTGAGCATAGTTCTTTTTGAAAACAAGAAAGAGAAACTGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| 3UTR CAA 72 bp | GAGCACCTCGAGCTAACTATAATTAAGTACCTGTTATaGAGGTCAAATAGAACAATTCACTCAAAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: EHLELTIIKYLL*RSNRTIHSKDT Trigger: CGTGTCCTTTGAGTGAATTGTTCTATTTGACCTCAATAACAGGTACTTAATTATAGTTAGCTCGAGGTGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS TCA 90 bp | GGCCCTTGCCGCAGATGGTGGTCTTGTAGTCGCCAAAGATCTGCCTaGCAGCGCCGGTGGTGTAGAAGCCCTCAGCCAGCAGGAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPCRRWWSCSRQRSA*QRRWCRSPQPAGGP Trigger: GGGCCCTCCTGCTGGCTGAGGGCTTCTACACCACCGGCGCTGTCAGGCAGATCTTTGGCGACTACAAGACCACCATCTGCGGCAAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | TGCGACTTGCAGCTGGGGAGTCACCTTCTCAGGCATCCCCCATTTCTAGCAGGACTCCAAAGAATGAGCTaGATGTTGGCCTCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: CDLQLGSHLLRHPPFLAGLQRMS*MLASGT Trigger: GGTTCCAGAGGCCAACATCAAGCTCATTCTTTGGAG...TCCTGCTAGAAATGGGGGATGCCTGAGAAGGTGACTCCCCAGCTGCAAGTCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR CAA 90 bp | GCTAGTTCCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCGTTGCGCTCAGGCCCTaGCCGCAGATGGTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSFLFSAPWKPQGCHGSVALRP*PQMVVL Trigger: CAAGACCACCATCTGCGGCAAGGGCCTGAGCGCAAC...GCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGGAACTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGGGTAGTACTGTCATTAATGTTTTAATCCTGAACGGGCACAGCATATTTGGCCCCCTGTTACCGTaGCGCTCAGGCCCTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGSTVINVLILNGHSIFGPLLP*RSGPCR Trigger: GCGGCAAGGGCCTGAGCGCAACGGTAACAGGGGGCC...AAATATGCTGTGCCCGTTCAGGATTAAAACATTAATGACAGTACTACCCTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR CAA 90 bp | TGCATTTACCCGAAGGCCATTTCAAATTACACCTTTAGCATCCACCAACTGATGGTTGCGCTCAGGCCCTaGCCGCAGATGGTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CIYPKAISNYTFSIHQLMVALRP*PQMVVL Trigger: CAAGACCACCATCTGCGGCAAGGGCCTGAGCGCAAC...CATCAGTTGGTGGATGCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | AAACACAACACTGTAGGCTGTGTGGTTAGAGCCTTGCTATTAGACAAAGGGGAGAGAATGAGCTTGATGTaGGCCTCTGGAACCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KHNTVGCVVRALLLDKGERMSLM*ASGTPP Trigger: GGGAGGGGTTCCAGAGGCCAACATCAAGCTCATTCT...CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR CAA 90 bp | GAGTTCTTTAGGTTTCAAATTCTGCCTGTCCTCTCTGCGGCTCCAGAGCTCTATCAGATGGACAGAAGGTaGGAGCCACAAACCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EFFRFQILPVLSAAPELYQMDRR*EPQTLP Trigger: TGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCTG...ATAGAGCTCTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS GCA 90 bp | ACTCAGCTGTTTTGCAGATGGACAGAAGGTTGGAGCCACAAACCTTaGCAGGGAAAGCATTCCATGGGAGAACACCATACATTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQLFCRWTEGWSHKP*QGKHSMGEHHTFWH Trigger: ATGCCAGAATGTATGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCTGCAAAACAGCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | GAGCTAAGAACAATGGGCTCAATTGATAAACTGGAGATGCTCTCAGCTTCTGAGGTGATGCCCACAAACTaGTCGGGATGTCCTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELRTMGSIDKLEMLSASEVMPTN*SGCPSH Trigger: ATGGCTAGGACATCCCGACAAGTTTGTGGGCATCAC...CTCAGAAGCTGAGAGCATCTCCAGTTTATCAATTGAGCCCATTGTTCTTAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR CAA 90 bp | AAACACAACACTGTAGGCTGTGTGGTTAGAGCCTTGCTATTAGACAAAGGGGAGATACTGGCAGAGGTCTaGCTAGGGAAGGCAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KHNTVGCVVRALLLDKGEILAEV*LGKAID Trigger: GTCTATTGCCTTCCCTAGCAAGACCTCTGCCAGTAT...CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | CCTTTCTATTCTCAGCTCCTTGGAAACCACAAGGTTGTCATGGTAGCTGTTATCATACTGGCAGAGGTCTaGCTAGGGAAGGCAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PFYSQLLGNHKVVMVAVIILAEV*LGKAID Trigger: GTCTATTGCCTTCCCTAGCAAGACCTCTGCCAGTAT...GATAACAGCTACCATGACAACCTTGTGGTTTCCAAGGAGCTGAGAATAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | AAACACAACACTGTAGGCTGTGTGGTTAGAGCCTTGCTATTAGACAAAGGGGAGTGGAACTCAGCTGTTTaGCAGATGGACAGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KHNTVGCVVRALLLDKGEWNSAV*QMDRRL Trigger: CAACCTTCTGTCCATCTGCAAAACAGCTGAGTTCCA...CTCCCCTTTGTCTAATAGCAAGGCTCTAACCACACAGCCTACAGTGTTGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | GATTGGTTTCTTACATGTCCTTTTAGCTCTCCTCACTCTTGTGCATCCTGCTTGCAGGTGGAAGGTCATTaGGAACTCAGCTGTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DWFLTCPFSSPHSCASCLQVEGH*ELSCFA Trigger: TGCAAAACAGCTGAGTTCCAAATGACCTTCCACCTG...CAAGCAGGATGCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS-3UTR CAA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACATTGGAGCCACAAACCTaGCCAGGGAAAGCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KNYAQRIILQVFLIQLQTLEPQT*PGKAFH Trigger: ATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAA...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | TCACTGCAAGACTCTCCTTTCTTGTTATACTCATCAAGTAAGAAGAGGGCCAATTGGAACTCAGCTGTTTaGCAGATGGACAGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQDSPFLLYSSSKKRANWNSAV*QMDRRL Trigger: CAACCTTCTGTCCATCTGCAAAACAGCTGAGTTCCA...ATTGGCCCTCTTCTTACTTGATGAGTATAACAAGAAAGGAGAGTCTTGCAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | AGAGTGAGTTCTTGGTTTTGTGCATCAAAGAGAATGTATTTGACTCCTACTGATTTGGAGCCACAAACCTaGCCAGGGAAAGCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSSWFCASKRMYLTPTDLEPQT*PGKAFH Trigger: ATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAA...ATCAGTAGGAGTCAAATACATTCTCTTTGATGCACAAAACCAAGAACTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS-3UTR CAA 90 bp | AAGAACTATGCTCAAAGAATCATCCTCCAGGTCTTTCTGATACAACTCCAAACACAGGTGGAAGGTCATTaGGAACTCAGCTGTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KNYAQRIILQVFLIQLQTQVEGH*ELSCFA Trigger: TGCAAAACAGCTGAGTTCCAAATGACCTTCCACCTG...TGTTTGGAGTTGTATCAGAAAGACCTGGAGGATGATTCTTTGAGCATAGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS TCA 72 bp | CGCAGATGGTGGTCTTGTAGTCGCCAAAGATCTGCCTaGCAGCGCCGGTGGTGTAGAAGCCCTCAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRWWSCSRQRSA*QRRWCRSPQPA Trigger: TGCTGGCTGAGGGCTTCTACACCACCGGCGCTGTCAGGCAGATCTTTGGCGACTACAAGACCACCATCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS GCA 72 bp | CCTTCTGGCCCCCTGTTACCGTTGCGCTCAGGCCCTTaGCGCAGATGGTGGTCTTGTAGTCGCCAAAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGPLLPLRSGP*RRWWSCSRQRS Trigger: AGATCTTTGGCGACTACAAGACCACCATCTGCGGCAAGGGCCTGAGCGCAACGGTAACAGGGGGCCAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033800.13 |
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| CDS TCA 72 bp | CAAACACCAGGAGCCATACAACAGTCAGGGCATAGGTaGTGCCCACAAACGTTGCGCTCAGGCCCTTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QTPGAIQQSGHR*CPQTLRSGPCR Trigger: GCGGCAAGGGCCTGAGCGCAACGTTTGTGGGCATCACCTATGCCCTGACTGTTGTATGGCTCCTGGTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113085.2 |
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| CDS CAA 72 bp | GTTTTGCAGATGGACAGAAGGTTGGAGCCACAAACCTaGCCAGGGAAAGCATTCCATGGGAGAACACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: VLQMDRRLEPQT*PGKAFHGRTPY Trigger: GTATGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCTGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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| CDS CAA 90 bp | AACTCAGCTGTTTTGCAGATGGACAGAAGGTTGGAGCCACAAACCTaGCCAGGGAAAGCATTCCATGGGAGAACACCATACATTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NSAVLQMDRRLEPQT*PGKAFHGRTPYILA Trigger: TGCCAGAATGTATGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAACCTTCTGTCCATCTGCAAAACAGCTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033800.13 ENSMUST00000113085.2 |
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