Pregenerated sensors for PLOD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004846Ensembl transcript IDs: ENSMUST00000004968.11, ENSMUST00000127100.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCAGTGGGCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTaGGACCAGCACATTCCATCCCAGGCACACAGACACTCTCGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: GQWASGRLQGPPEDC*DQHIPSQAHRHSRE Trigger: CTCCCGAGAGTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 90 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTaGGCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: QGTLRSPLSLSPWGQ*ASGRLQGPPEDCWD Trigger: GTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 90 bp | TTTATCAGGCAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATaGGGTCAGTGGGCAAGTGGAAGACTCCAGGGACCTCCTGAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: FIRQGTLRSPLSLSP*GQWASGRLQGPPED Trigger: GTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTGCCTGATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR TCA 90 bp | AGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACAGCGTCCCCTCTCTCTaGGAATGGCGACCCAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: RDLLRTVGTSTFHPRHTDSVPSL*EWRPRL Trigger: CAACCTGGGTCGCCATTCTCAGAGAGAGGGGACGCT...GTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGCTGAGGAAGCTTAATAATTTATCAGGCAGGGGACCCTCAGAAGTCCACGGGTCAGTGGGCAAGTaGAAGACTCCAGGGACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VRLRKLNNLSGRGPSEVHGSVGK*KTPGTS Trigger: GGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACCC...GTGGACTTCTGAGGGTCCCCTGCCTGATAAATTATTAAGCTTCCTCAGCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR TCA 90 bp | GGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACACTCCAGGGACCTCCTaGGGACTGTTGGGACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHMRPCLYIGLTDSMVTNTPGTS*GLLGPA Trigger: TGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGT...GTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAGTCCATGGGGTCAGTaGGCAAGTGGAAGACTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTSPWGQ*ASGRLQ Trigger: CTGGAGTCTTCCACTTGCCCACTGACCCCATGGACT...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTGAAGTCCACTTTCCCTaGGTCCATGGGGTCAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: MRPCLYIGLTDSMVTNILEVHFP*VHGVSG Trigger: CCCACTGACCCCATGGACTCAGGGAAAGTGGACTTC...AAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTCTTTCCCTGAGTCCATaGGGTCAGTGGGCAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLSLYWTHGLNGYKHPFILSLSP*GQWASG Trigger: TCCACTTGCCCACTGACCCCATGGACTCAGGGAAAG...AATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 72 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATaGGGTCAGTGGGCAAGTGGAAGACTCCAGGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: QGTLRSPLSLSP*GQWASGRLQGP Trigger: AGGTCCCTGGAGTCTTCCACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 72 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTaGGACCAGCACATTCCATCCCAGGCACACAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: ASGRLQGPPEDC*DQHIPSQAHRH Trigger: GTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 72 bp | CTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTaGGCAAGTGGAAGACTCCAGGGACCTCCTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LRSPLSLSPWGQ*ASGRLQGPPED Trigger: GTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR TCA 72 bp | TTATCAGGCAGGGGACCCTCAGAAGTCCACTTTCCCTaGGTCCATGGGGTCAGTGGGCAAGTGGAAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSGRGPSEVHFP*VHGVSGQVEDS Trigger: GGAGTCTTCCACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTGCCTGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| 3UTR CCA 72 bp | GGCCAGCATGGGACACATGAGACCCTGTCTTTATATTaGACTCACGGACTCAATGGTTACAAACATCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GQHGTHETLSLY*THGLNGYKHPF Trigger: AAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCATGCTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACACTCCATGGCCATGTCCCTaGCCTCCCCTGCGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLRTVGTSTFHPRHTDTPWPCP*PPLRSG Trigger: CCCTGAGCGCAGGGGAGGCCAGGGACATGGCCATGG...AGTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCACCCACCTCAGGGTACTaGTCTGCCAGCCCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPPTSGY*SASPHS Trigger: TGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGG...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | AGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACAGGAGCAGTAGGCGCTaGAGGAACCGAGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLLRTVGTSTFHPRHTDRSSRR*RNRGRK Trigger: CTTCCTGCCTCGGTTCCTGCAGCGCCTACTGCTCCT...GTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCACGAGGGCTGCTCATCTaGCCGGTAGCGGACCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPRGLLI*PVADHE Trigger: TTCGTGGTCCGCTACCGGCCAGATGAGCAGCCCTCG...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGAGCAGCTCTGTCGGGCTaGTTGCCAGAATCACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QGPPEDCWDQHIPSQAHRAALSG*LPESRR Trigger: ACGACGTGATTCTGGCAAGCAGCCCGACAGAGCTGC...TCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTGAGAATGGCGACCCAGGTTGTCCAACAAGGCACAGTGGCAGAGAAGCTCAGGGTACTGCTCTaGCAGCCCCCACTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLRMATQVVQQGTVAEKLRVLL*QPPLRP Trigger: TGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAG...CTTCTCTGCCACTGTGCCTTGTTGGACAACCTGGGTCGCCATTCTCAGAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTGGGCAAGTAAGAACTCCGCAGACTaGAGAAAACGCCGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGTLRSPLSLSPWGQWASKNSAD*RKRRYP Trigger: GGGGTACCGGCGTTTTCTGCAGTCTGCGGAGTTCTT...ACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | AGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACAGGAAGGGAGTAGGCTaGTCCACAAACACGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDLLRTVGTSTFHPRHTDRKGVG*STNTAR Trigger: TCTGGCCGTGTTTGTGGAGCAGCCTACTCCCTTCCT...GTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | AGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACAGTTGGACCAGAGCTTaGCATGGCGGGAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLLRTVGTSTFHPRHTDSWTRA*HGGKAW Trigger: CCATGCTTTCCCGCCATGGCAAGCTCTGGTCCAACT...GTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | AGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACTGCTGGTTGCTGAGGTaGAGGAAGATGCCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLLRTVGTSTFHPRHTDCWLLR*RKMPLS Trigger: GGACAAGGGCATCTTCCTCCACCTCAGCAACCAGCA...GTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATATGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPYVRSS*SHWSSY Trigger: ATACGAGGACCAGTGGCTTCAGCTGCTGCGGACATA...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACACTTCCTCAGGGTCTGGTTaGAGAATCCACAGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLRTVGTSTFHPRHTDTSSGSG*RIHSLP Trigger: AGGGAGGCTGTGGATTCTGCAACCAGACCCTGAGGA...AGTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCAAGCCACCTGACCTTCTaGCCTCCACCAACTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPSHLTF*PPPTVR Trigger: TCGAACAGTTGGTGGAGGCCAGAAGGTCAGGTGGCT...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTGGGCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGGTGGGACCATTTCCATaGACCACAACAGGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQWASGRLQGPPEDCWDQVGPFP*TTTGSV Trigger: CACACTTCCTGTTGTGGTCCATGGAAATGGTCCCAC...CTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCACTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACACTCTGCTCGGTCAGCAGTaGGAACCAGTACACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLRTVGTSTFHPRHTDTLLGQQ*EPVHIW Trigger: CCAGATGTGTACTGGTTCCCACTGCTGACCGAGCAG...AGTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTGGGCAAGTCATCTAAGGCTCCATTaGGGTTCTGAAAGATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTLRSPLSLSPWGQWASHLRLH*GSERSG Trigger: CCCGGATCTTTCAGAACCTCAATGGAGCCTTAGATG...ACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGATACACCTCGCTGTTGTaGAGGAAGAGAGAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGPPEDCWDQHIPSQAHRYTSLL*RKREIL Trigger: CAGGATCTCTCTCTTCCTTCACAACAGCGAGGTGTA...TCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTGGGCAAGTCACCAGCTTTACAGCTaGAAAATGGTCCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGTLRSPLSLSPWGQWASHQLYS*KMVLEL Trigger: CAGCTCCAGGACCATTTTTCAGCTGTAAAGCTGGTG...ACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GAGAATGGCGACCCAGGTTGTCCAACAAGGCACAGTGGCAGAGAAGGTTTGGCATCACTGCCCGTGTCTTaGTGTGGTAGCCAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ENGDPGCPTRHSGREGLASLPVS*CGSQGT Trigger: TGTTCCCTGGCTACCACACCAAGACACGGGCAGTGA...TGCCAAACCTTCTCTGCCACTGTGCCTTGTTGGACAACCTGGGTCGCCATTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTGAGAATGGCGACCCAGGTTGTCCAACAAGGCACAGTGGCAGAGAAGATGGTCCTGGAGCTGTaGCCAGGCATCTGCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLRMATQVVQQGTVAEKMVLEL*PGICNM Trigger: CATATTGCAGATGCCTGGCCACAGCTCCAGGACCAT...CTTCTCTGCCACTGTGCCTTGTTGGACAACCTGGGTCGCCATTCTCAGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | CTCCTGAGGACTGTTGGGACCAGCACATTCCATCCCAGGCACACAGACACTCTCGAGAATACCTCCTTTTaGGGCAGTTCAGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRTVGTSTFHPRHTDTLENTSF*GSSVLR Trigger: CCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTC...GAGAGTGTCTGTGTGCCTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGGACCCTCAGAAGTCCACTTTCCCTGAGTCCATGGGGTCAGTGGGCAAGTCCCACCTGTTTCATGTaGATATCAACGGTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QGTLRSPLSLSPWGQWASPTCFM*ISTVGT Trigger: TGTTCCCACCGTTGATATCCACATGAAACAGGTGGG...ACTTGCCCACTGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGAGGAAGCTTAATAATTTATCAGGCAGGGGACCCTCAGAAGTCCACGGGGAGTCCAGCCATTaGGGACATAGTTCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRKLNNLSGRGPSEVHGESSH*GHSSPG Trigger: ACCTGGGGAACTATGTCCCCAATGGCTGGACTCCCC...GTGGACTTCTGAGGGTCCCCTGCCTGATAAATTATTAAGCTTCCTCAGCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | AATTTTAATCATGTGTATTTGTGCATGGTGGGAGGCCAGCATGGGACACATGAGGCTCAGGGCCTCCTCTaGCCCCACCAGCTTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFNHVYLCMVGGQHGTHEAQGLL*PHQLYS Trigger: GCTGTAAAGCTGGTGGGGCCAGAGGAGGCCCTGAGC...CTCATGTGTCCCATGCTGGCCTCCCACCATGCACAAATACACATGATTAAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTGGGCGTAGTACTCATTaGGGCTCAGGGCACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMGHMRPCLYIGLTDSMVGRSTH*GSGHPR Trigger: TCTGGGGTGCCCTGAGCCCCAATGAGTACTACGCCC...AACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | AATTTTAATCATGTGTATTTGTGCATGGTGGGAGGCCAGCATGGGACACATGAGGGAAGCGCTTCCCCATaGCCACCTCAGGGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFNHVYLCMVGGQHGTHEGSASP*PPQGTA Trigger: AGCAGTACCCTGAGGTGGGCATGGGGAAGCGCTTCC...CTCATGTGTCCCATGCTGGCCTCCCACCATGCACAAATACACATGATTAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGAGTGTCCTCAGGGTCTaGTTGCAGAATCCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASMGHMRPCLYIGLTDSMSVLRV*LQNPQP Trigger: AGGCTGTGGATTCTGCAACCAGACCCTGAGGACACT...CATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCATGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCAATGCGCACACGATTCTaGTCAAACTTTAAGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPMRTRF*SNFKIT Trigger: AGTGATCTTAAAGTTTGACCAGAATCGTGTGCGCAT...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | GGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACCACTGGCGGACAATCTaGTGGATGGTGGGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHMRPCLYIGLTDSMVTNHWRTI*WMVGAK Trigger: CTTTGCTCCCACCATCCATCAGATTGTCCGCCAGTG...GTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | AGCATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTTGTCCCGGACGCTCTTaGAGAAAGCCATATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMGHMRPCLYIGLTDSMVCPGRS*RKPYLG Trigger: ACCCAGATATGGCTTTCTGCAAGAGCGTCCGGGACA...AACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | GGACTCACGGACTCAATGGTTACAAACATCCTTTTATTGAAAGTGAGGCTGAGGGGGTTGTCAAAGATCTaGCAGAGGTCTGGGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTDSMVTNILLLKVRLRGLSKI*QRSGCR Trigger: CCTACACCCAGACCTCTGGCAGATCTTTGACAACCC...CCTCAGCCTCACTTTCAATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | GGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACAGCTCATCACACATCTaGTCGGTCAGCAGTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHMRPCLYIGLTDSMVTNSSSHI*SVSSGN Trigger: GTTCCCACTGCTGACCGAGCAGATGTGTGATGAGCT...GTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACACACCAGCAATTTGTCTaGGTTGACAGCATTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTHQQFV*VDSIGA Trigger: GGCGCCAATGCTGTCAACCCAGACAAATTGCTGGTG...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | ATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTCTCTGTCGGGCTGCTTaGCAGAATCACGTCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRPCLYIGLTDSMVTNILLCRAA*QNHVVA Trigger: AGCTACGACGTGATTCTGGCAAGCAGCCCGACAGAG...AAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTTCACACTCAGGGTTCTaGCGACAGCTGTCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSLYWTHGLNGYKHPFISHSGF*RQLSMA Trigger: GGCCATGGACAGCTGTCGGCAGAACCCTGAGTGTGA...AATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | ATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTGCTGAAAAATGGTCCTaGAGCTGTGGCCAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MRPCLYIGLTDSMVTNILAEKWS*SCGQAS Trigger: AGATGCCTGGCCACAGCTCCAGGACCATTTTTCAGC...AAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACATTTACAGCTGAAAAATaGTCCTGGAGCTGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTFTAEK*SWSCGQ Trigger: CTGGCCACAGCTCCAGGACCATTTTTCAGCTGTAAA...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTCAACAAAGGACACCATaGTGTATCGAGTACCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSLYWTHGLNGYKHPFIQQRTP*CIEYPG Trigger: CCCGGGGTACTCGATACATCATGGTGTCCTTTGTTG...AATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CCA 90 bp | CTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTGAAAGTGTGTGGATATCAACGGTaGGAACATTCTCGTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYIGLTDSMVTNILLLKVCGYQR*EHSRIL Trigger: GAGGATACGAGAATGTTCCCACCGTTGATATCCACA...CACTTTCAATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 90 bp | CCACCAGAGTTGAGGAAGCGCTTCCCCATGCCCACCTCAGGGTACTaGTCTGCCAGCCCCCACTCAGGCCAGCAGAAGCTCTCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPELRKRFPMPTSGY*SASPHSGQQKLSAE Trigger: CTCTGCTGAGAGCTTCTGCTGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCATGGGGAAGCGCTTCCTCAACTCTGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 90 bp | AGAGTTGAGGAAGCGCTTCCCCATGCCCACCTCAGGGTACTGCTCTaGCAGCCCCCACTCAGGCCAGCAGAAGCTCTCAGCAGAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RVEEALPHAHLRVLL*QPPLRPAEALSREQ Trigger: CTGTTCTCTGCTGAGAGCTTCTGCTGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCATGGGGAAGCGCTTCCTCAACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CCA 90 bp | CTGCCCGTGTCTTGGTGTGGTAGCCAGGGAACAGGTACTCCGTCATaGGCCCCACATATGTCCGCAGCAGCTGAAGCCACTGGTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPVSWCGSQGTGTPS*APHMSAAAEATGPR Trigger: ACGAGGACCAGTGGCTTCAGCTGCTGCGGACATATGTGGGGCCCATGACGGAGTACCTGTTCCCTGGCTACCACACCAAGACACGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS CCA 90 bp | CCCGGACGCTCTTGCAGAAAGCCATATCTGGGTCTGTGTCGCTGCTaGAGAATACCTCCTTTTGGGGCAGTTCAGTCCTCAGGGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSCRKPYLGLCRC*RIPPFGAVQSSGSP Trigger: GGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGAGCGTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGTCTGGGTTGACAGCATaGGCGCCCCGGGGTCGATCG | + |
|
Preference number: 5 (lower is better) Translates to: ASMGHMRPCLYIGLTDSMSGLTA*APRGRS Trigger: CGATCGACCCCGGGGCGCCAATGCTGTCAACCCAGA...CATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCATGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCAAAGTTGGACCAGAGCTaGCCATGGCGGGAAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPKLDQS*PWRESM Trigger: CATGCTTTCCCGCCATGGCAAGCTCTGGTCCAACTT...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATGGTTGAGGGCGACATaGAGAGTGAAGGTGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPWLRAT*RVKVDE Trigger: CTCGTCCACCTTCACTCTCAATGTCGCCCTCAACCA...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS TCA 90 bp | GGGAACAGGTACTCCGTCATGGGCCCCACATATGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTATCCCACCTGTTTCATGTGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: GNRYSVMGPTYVRSS*SHWSSYPTCFMWIS Trigger: TGATATCCACATGAAACAGGTGGGATACGAGGACCAGTGGCTTCAGCTGCTGCGGACATATGTGGGGCCCATGACGGAGTACCTGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS GCA 90 bp | CCCACTCAGGCCAGCAGAAGCTCTCAGCAGAGAACAGCAGATGACTaGCACTCTGAACAAACTTCTTCAGCAGCTCTGTCGGGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTQASRSSQQRTADD*HSEQTSSAALSGCL Trigger: CAAGCAGCCCGACAGAGCTGCTGAAGAAGTTTGTTCAGAGTGGCAGTCATCTGCTGTTCTCTGCTGAGAGCTTCTGCTGGCCTGAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 90 bp | TGTCCCGGACGCTCTTGCAGAAAGCCATATCTGGGTCTGTGTCGCTaGTGGAGAATACCTCCTTTTGGGGCAGTTCAGTCCTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPGRSCRKPYLGLCR*WRIPPFGAVQSSGS Trigger: AGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGAGCGTCCGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CCA 90 bp | AAAGCCATATCTGGGTCTGTGTCGCTGCTGGAGAATACCTCCTTTTaGGGCAGTTCAGTCCTCAGGGTCTCCCCGCGGATCACATATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KAISGSVSLLENTSF*GSSVLRVSPRITYA Trigger: GGCATATGTGATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTGAGAATGGCGACCCAGGTTGTCCAACAAGGCACAGTGGCAGAGAAGCCAAACTCGTGCTGGTaGCTGAGGTGGAGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLRMATQVVQQGTVAEKPNSCW*LRWRKM Trigger: CATCTTCCTCCACCTCAGCAACCAGCACGAGTTTGG...CTTCTCTGCCACTGTGCCTTGTTGGACAACCTGGGTCGCCATTCTCAGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GCAAGTGGAAGACTCCAGGGACCTCCTGAGGACTGTTGGGACCAGCACATTCCATCTACACCCTTGTGGTaGAGGGCGACATTGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRLQGPPEDCWDQHIPSTPLW*RATLRV Trigger: CACTCTCAATGTCGCCCTCAACCACAAGGGTGTAGA...TGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAGTCCTCAGGGTCTGGTaGCAGAATCCACAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTVLRVW*QNPQPP Trigger: GGGAGGCTGTGGATTCTGCAACCAGACCCTGAGGAC...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCTGAGGAAGCTTAATAATTTATCAGGCAGGGGACCCTCAGAAGTCCACGGAGAATACCTCCTTTaGGGGCAGTTCAGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRLRKLNNLSGRGPSEVHGEYLL*GQFSPQ Trigger: CTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCC...GTGGACTTCTGAGGGTCCCCTGCCTGATAAATTATTAAGCTTCCTCAGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 90 bp | TTCCATGGACCACAACAGGAAGTGTGTCGTAGGCCACATTCCGGATaGGCACACGATTCTGGTCAAACTTTAAGATCACTTCATCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FHGPQQEVCRRPHSG*AHDSGQTLRSLHLR Trigger: CCTTAGATGAAGTGATCTTAAAGTTTGACCAGAATCGTGTGCGCATCCGGAATGTGGCCTACGACACACTTCCTGTTGTGGTCCATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | GGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACTTCTCCATTTCCTTCTaGAGCCACCTGACCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHMRPCLYIGLTDSMVTNFSISF*SHLTFW Trigger: CCAGAAGGTCAGGTGGCTCAAGAAGGAAATGGAGAA...GTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | ATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTGGTCCAGACTCAGTTaGAGTTTCTCCCGCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MRPCLYIGLTDSMVTNILWSRLS*SFSRSP Trigger: AGGGCTGCGGGAGAAACTCAAACTGAGTCTGGACCA...AAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | ATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTCTCCAGTCCACAGGGTaGTCAAAGATCTGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRPCLYIGLTDSMVTNILLQSTG*SKICQR Trigger: CCTCTGGCAGATCTTTGACAACCCTGTGGACTGGAG...AAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | CTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTGAAAGTGGCTCTGTCGGGCTGCTaGCCAGAATCACGTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYIGLTDSMVTNILLLKVALSGC*PESRRS Trigger: GCTACGACGTGATTCTGGCAAGCAGCCCGACAGAGC...CACTTTCAATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACATGGGTCCAGGTACAGTaGAGTGTAGAACAATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTWVQVQ*SVEQLI Trigger: GATCAATTGTTCTACACTCAACTGTACCTGGACCCA...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS TCA 90 bp | TGGTCAAACTTTAAGATCACTTCATCTAAGGCTCCATTGAGGTTCTaGAAGATCCGGGATTTATGGTCCAGACTCAGTTTGAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSNFKITSSKAPLRF*KIRDLWSRLSLSFS Trigger: GGAGAAACTCAAACTGAGTCTGGACCATAAATCCCGGATCTTTCAGAACCTCAATGGAGCCTTAGATGAAGTGATCTTAAAGTTTGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | CTTTATATTGGACTCACGGACTCAATGGTTACAAACATCCTTTTATTGAAAGTGATGAATCCACCAGAGTaGAGGAAGCGCTTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LYIGLTDSMVTNILLLKVMNPPE*RKRFPM Trigger: CATGGGGAAGCGCTTCCTCAACTCTGGTGGATTCAT...CACTTTCAATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS-3UTR CAA 90 bp | ATGGGACACATGAGACCCTGTCTTTATATTGGACTCACGGACTCAATGGTTACATATTACCTTCCTGTTTaGTTCAATCAAGACACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MGHMRPCLYIGLTDSMVTYYLPV*FNQDTQ Trigger: TTGCGTGTCTTGATTGAACAAAACAGGAAGGTAATA...TGTAACCATTGAGTCCGTGAGTCCAATATAAAGACAGGGTCTCATGTGTCCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | GCAGGAGGGCCCAGCCTTTCCTCGGAGAGGAGATTCTaGAGTCGTAACGCAGGAAGCGGCAGCCGCCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGGPSLSSERRF*SRNAGSGSRLP Trigger: AGGGAGGCGGCTGCCGCTTCCTGCGTTACGACTGCAGAATCTCCTCTCCGAGGAAAGGCTGGGCCCTCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | TTGAGGAAGCGCTTCCCCATGCCCACCTCAGGGTACTaGTCTGCCAGCCCCCACTCAGGCCAGCAGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRKRFPMPTSGY*SASPHSGQQKL Trigger: GAGCTTCTGCTGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCATGGGGAAGCGCTTCCTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CCA 72 bp | CTCTGCCGTAGCCACAGTGATCACCAGCAATTTGTCTaGGTTGACAGCATTGGCGCCCCGGGGTCGATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCRSHSDHQQFV*VDSIGAPGSIG Trigger: TCCGATCGACCCCGGGGCGCCAATGCTGTCAACCCAGACAAATTGCTGGTGATCACTGTGGCTACGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CCA 72 bp | TCTGGGTCTGTGTCGCTGCTGGAGAATACCTCCTTTTaGGGCAGTTCAGTCCTCAGGGTCTCCCCGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SGSVSLLENTSF*GSSVLRVSPRI Trigger: GATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 90 bp | TCTGTCTCTGCCGTAGCCACAGTGATCACCAGCAATTTGTCTGGGTaGACAGCATTGGCGCCCCGGGGTCGATCGGAGGCAGAAGTTACG | + |
|
Preference number: 6 (lower is better) Translates to: SVSAVATVITSNLSG*TALAPRGRSEAEVT Trigger: CGTAACTTCTGCCTCCGATCGACCCCGGGGCGCCAATGCTGTCAACCCAGACAAATTGCTGGTGATCACTGTGGCTACGGCAGAGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CTCATCTGGCCGGTAGCGGACCACGAAGTTCATCACTaGCCGTGTCTTGGTGTGGTAGCCAGGGAACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LIWPVADHEVHH*PCLGVVAREQV Trigger: TACCTGTTCCCTGGCTACCACACCAAGACACGGGCAGTGATGAACTTCGTGGTCCGCTACCGGCCAGATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS CCA 72 bp | TCTTGGTGTGGTAGCCAGGGAACAGGTACTCCGTCATaGGCCCCACATATGTCCGCAGCAGCTGAAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SWCGSQGTGTPS*APHMSAAAEAT Trigger: AGTGGCTTCAGCTGCTGCGGACATATGTGGGGCCCATGACGGAGTACCTGTTCCCTGGCTACCACACCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS CCA 72 bp | GGTAGCGGACCACGAAGTTCATCACTGCCCGTGTCTTaGTGTGGTAGCCAGGGAACAGGTACTCCGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGPRSSSLPVS*CGSQGTGTPSW Trigger: CCATGACGGAGTACCTGTTCCCTGGCTACCACACCAAGACACGGGCAGTGATGAACTTCGTGGTCCGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS CAA 72 bp | ATCTGGGTCTGTGTCGCTGCTGGAGAATACCTCCTTTaGGGGCAGTTCAGTCCTCAGGGTCTCCCCGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IWVCVAAGEYLL*GQFSPQGLPAD Trigger: ATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 72 bp | CTGAGGTGGAGGAAGATGCCCTTGTCCCGGACGCTCTaGCAGAAAGCCATATCTGGGTCTGTGTCGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRWRKMPLSRTL*QKAISGSVSLL Trigger: CAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGAGCGTCCGGGACAAGGGCATCTTCCTCCACCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS TCA 72 bp | TACTCCGTCATGGGCCCCACATATGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTATCCCACCTGTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: YSVMGPTYVRSS*SHWSSYPTCFM Trigger: CATGAAACAGGTGGGATACGAGGACCAGTGGCTTCAGCTGCTGCGGACATATGTGGGGCCCATGACGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004968.11 ENSMUST00000127100.2 |
||
| CDS CAA 72 bp | ACAGTGATCACCAGCAATTTGTCTGGGTTGACAGCATaGGCGCCCCGGGGTCGATCGGAGGCAGAAGTTACG | + |
|
Preference number: 6 (lower is better) Translates to: TVITSNLSGLTA*APRGRSEAEVT Trigger: CGTAACTTCTGCCTCCGATCGACCCCGGGGCGCCAATGCTGTCAACCCAGACAAATTGCTGGTGATCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 90 bp | GAAAGCCATATCTGGGTCTGTGTCGCTGCTGGAGAATACCTCCTTTaGGGGCAGTTCAGTCCTCAGGGTCTCCCCGCGGATCACATATGC | + |
|
Preference number: 6 (lower is better) Translates to: ESHIWVCVAAGEYLL*GQFSPQGLPADHIC Trigger: GCATATGTGATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CAGTTCAGTCCTCAGGGTCTCCCCGCGGATCACATATaGCTGAGATATGTAGGGTACATTCCACACGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QFSPQGLPADHI*LRYVGYIPHAH Trigger: GTGGGCGTGTGGAATGTACCCTACATATCTCAGGCATATGTGATCCGCGGGGAGACCCTGAGGACTGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CGCTCTTGCAGAAAGCCATATCTGGGTCTGTGTCGCTaGTGGAGAATACCTCCTTTTGGGGCAGTTCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCRKPYLGLCR*WRIPPFGAVQS Trigger: GGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS TCA 72 bp | TCTGAAAGATCCGGGATTTATGGTCCAGACTCAGTTTaGGTTTCTCCCGCAGCCCTGGGTCCAGGTACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SERSGIYGPDSV*VSPAALGPGTV Trigger: AACTGTACCTGGACCCAGGGCTGCGGGAGAAACTCAAACTGAGTCTGGACCATAAATCCCGGATCTTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CACTCTGAACAAACTTCTTCAGCAGCTCTGTCGGGCTaGTTGCCAGAATCACGTCGTAGCTGTCCACAAACA | + |
|
Preference number: 6 (lower is better) Translates to: HSEQTSSAALSG*LPESRRSCPQT Trigger: TGTTTGTGGACAGCTACGACGTGATTCTGGCAAGCAGCCCGACAGAGCTGCTGAAGAAGTTTGTTCAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CCA 72 bp | TCTTGCAGAAAGCCATATCTGGGTCTGTGTCGCTGCTaGAGAATACCTCCTTTTGGGGCAGTTCAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRKPYLGLCRC*RIPPFGAVQSS Trigger: TGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 90 bp | TTTCTCCCGCAGCCCTGGGTCCAGGTACAGTTGAGTGTAGAACAATaGATCATCATCGTCGTCTTTGTAGTTCCACTGGCGGACAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLPQPWVQVQLSVEQ*IIIVVFVVPLADNL Trigger: CAGATTGTCCGCCAGTGGAACTACAAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACCCAGGGCTGCGGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CTGAACAAACTTCTTCAGCAGCTCTGTCGGGCTGCTTaGCAGAATCACGTCGTAGCTGTCCACAAACATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LNKLLQQLCRAA*QNHVVAVHKHD Trigger: ATCATGTTTGTGGACAGCTACGACGTGATTCTGGCAAGCAGCCCGACAGAGCTGCTGAAGAAGTTTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 72 bp | CAGCCCTGGGTCCAGGTACAGTTGAGTGTAGAACAATaGATCATCATCGTCGTCTTTGTAGTTCCACTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QPWVQVQLSVEQ*IIIVVFVVPLA Trigger: CGCCAGTGGAACTACAAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACCCAGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS GCA 72 bp | CCACAACAGGAAGTGTGTCGTAGGCCACATTCCGGATaGGCACACGATTCTGGTCAAACTTTAAGATCACTT | + |
|
Preference number: 6 (lower is better) Translates to: PQQEVCRRPHSG*AHDSGQTLRSL Trigger: AAGTGATCTTAAAGTTTGACCAGAATCGTGTGCGCATCCGGAATGTGGCCTACGACACACTTCCTGTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 90 bp | CAGACTCAGTTTGAGTTTCTCCCGCAGCCCTGGGTCCAGGTACAGTaGAGTGTAGAACAATTGATCATCATCGTCGTCTTTGTAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QTQFEFLPQPWVQVQ*SVEQLIIIVVFVVP Trigger: TGGAACTACAAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACCCAGGGCTGCGGGAGAAACTCAAACTGAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS CAA 72 bp | TTTGAGTTTCTCCCGCAGCCCTGGGTCCAGGTACAGTaGAGTGTAGAACAATTGATCATCATCGTCGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FEFLPQPWVQVQ*SVEQLIIIVVF Trigger: AAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACCCAGGGCTGCGGGAGAAACTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||
| CDS TCA 72 bp | GGTCAAACTTTAAGATCACTTCATCTAAGGCTCCATTaGGGTTCTGAAAGATCCGGGATTTATGGTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GQTLRSLHLRLH*GSERSGIYGPD Trigger: GTCTGGACCATAAATCCCGGATCTTTCAGAACCTCAATGGAGCCTTAGATGAAGTGATCTTAAAGTTTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004968.11 |
||