Pregenerated sensors for PLOD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032374Ensembl transcript IDs: ENSMUST00000070522.14, ENSMUST00000160359.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTaGCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGCTA | + |
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Preference number: 1 (lower is better) Translates to: PWRNTGAQFPPETNI*LMHCSFPVAMLPWL Trigger: TAGCCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR GCA 90 bp | GGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATaGACTGTTCCTTTCCAGTGGCTATGCTTCCATGGCTATCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GTQGPNFHQKRTSAS*TVPFQWLCFHGYLH Trigger: GTGCAGATAGCCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR GCA 90 bp | CCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGCTATCTaGACTAGGTTTCCTGAGGGAAACCTTTGTGCAATATTTTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: PHALFLSSGYASMAI*TRFPEGNLCAIFSL Trigger: CAAAGAAAATATTGCACAAAGGTTTCCCTCAGGAAACCTAGTGCAGATAGCCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCATGCTTGGCCCAAAGTaGTGTTGTTCTGTTGACATT | + |
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Preference number: 2 (lower is better) Translates to: TCPGGTQGPNFHQKRTSAMLGPK*CCSVDI Trigger: AATGTCAACAGAACAACATCACTTTGGGCCAAGCAT...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACGGCTTTCAGGTTTGCTaGTTTTCATTTAGAACCGTT | + |
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Preference number: 2 (lower is better) Translates to: WRNTGAQFPPETNICLMHGFQVC*FSFRTV Trigger: AACGGTTCTAAATGAAAATCAGCAAACCTGAAAGCC...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACAAGTGTTCAAATGCTTaGCCCAAAGTGATGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: WRNTGAQFPPETNICLMHKCSNA*PKVMLF Trigger: GAACAACATCACTTTGGGCCAAGCATTTGAACACTT...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGAAGTGTTCAAATGCTTaGCCCAAAGTGATGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ETNICLMHCSFPVAMLPWKCSNA*PKVMLF Trigger: GAACAACATCACTTTGGGCCAAGCATTTGAACACTT...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTCCAGAAACGAACATCTaGCTCATGCACTGTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSPETNI*LMHCSF Trigger: AAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTACTGTTCCTTTCCAGTaGCTATGCTTCCATGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSTVPFQ*LCFHGY Trigger: ATAGCCATGGAAGCATAGCCACTGGAAAGGAACAGT...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTGGCTTTCAGGTTTGCTaGTTTTCATTTAGAACCGTT | + |
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Preference number: 2 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSGFQVC*FSFRTV Trigger: AACGGTTCTAAATGAAAATCAGCAAACCTGAAAGCC...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR GCA 72 bp | GGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATaGACTGTTCCTTTCCAGTGGCTATGCTTCCATGGC | + |
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Preference number: 3 (lower is better) Translates to: GPNFHQKRTSAS*TVPFQWLCFHG Trigger: GCCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR TCA 72 bp | AAGCACTTTGTAAAGCAGAAAGACATGAGCTTCCCCTaGGACTTGCCCTGGAGGAACACAGGGGCCCAATTT | + |
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Preference number: 3 (lower is better) Translates to: KHFVKQKDMSFP*DLPWRNTGAQF Trigger: AAATTGGGCCCCTGTGTTCCTCCAGGGCAAGTCTCAGGGGAAGCTCATGTCTTTCTGCTTTACAAAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR GCA 72 bp | AACACAGGGGCCCAATTTCCACCAGAAACGAACATCTaGCTCATGCACTGTTCCTTTCCAGTGGCTATGCTT | + |
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Preference number: 3 (lower is better) Translates to: NTGAQFPPETNI*LMHCSFPVAML Trigger: AAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCAAAGTGTTCAAATGCTaGGCCCAAAGTGATGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: TCPGGTQGPNFHQKRTSAKVFKC*AQSDVV Trigger: AACAACATCACTTTGGGCCAAGCATTTGAACACTTT...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR CCA 72 bp | CTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATaGCTATCTGCACTAGGTTTCCTGAGGGAAACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LMHCSFPVAMLP*LSALGFLRETF Trigger: AAAGGTTTCCCTCAGGAAACCTAGTGCAGATAGCCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR GCA 72 bp | CTGTTCCTTTCCAGTGGCTATGCTTCCATGGCTATCTaGACTAGGTTTCCTGAGGGAAACCTTTGTGCAATA | + |
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Preference number: 3 (lower is better) Translates to: LFLSSGYASMAI*TRFPEGNLCAI Trigger: TATTGCACAAAGGTTTCCCTCAGGAAACCTAGTGCAGATAGCCATGGAAGCATAGCCACTGGAAAGGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| 3UTR-3UTR CAA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGAAAGTGTTCAAATGCTaGGCCCAAAGTGATGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: ETNICLMHCSFPVAMLPWKVFKC*AQSDVV Trigger: AACAACATCACTTTGGGCCAAGCATTTGAACACTTT...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTGCCAGCCGCTTATCTaGCCACAGCAGCCCGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSACQPLI*PQQPVR Trigger: GCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCGCCTCCCAGGATGCATaGAGCTCCAGCCTTTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSAASQDA*SSSLFV Trigger: CACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGGC...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATTGCCAGCCGCTTATCTaGCCACAGCAGCCCGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHCQPLI*PQQPVR Trigger: GCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCA...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCGACGGCAGAAATCCATaGCCATGTTCCTGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSADGRNP*PCSWLL Trigger: CAGAAGCCAGGAACATGGGCATGGATTTCTGCCGTC...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCACACTTTTCATCCTaGCGGCAGAAATCCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSASHFSS*RQKSMP Trigger: GGGCATGGATTTCTGCCGTCAGGATGAAAAGTGTGA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCACAGGAAGTCCTTCGTaGAAATGTGTGAGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSATGSPS*KCVSLP Trigger: TGGGAGGCTCACACATTTGCACGAAGGACTTCCTGT...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGCCTCCCAGGATGCATaGAGCTCCAGCCTTTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHASQDA*SSSLFV Trigger: CACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGGC...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACCAGCAGCCCGTCCGCTaGAAAGACGATTTTATGATT | + |
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Preference number: 4 (lower is better) Translates to: WRNTGAQFPPETNICLMHQQPVR*KDDFMI Trigger: AATCATAAAATCGTCTTTGCAGCGGACGGGCTGCTG...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCAAACAGGGTACTTGTCTaGCAGCCGCTTATCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPNRVLV*QPLIWP Trigger: TGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTT...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCAGTGAGCCTCCCAGGATaGATGAAGCTCCAGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPVSLPG*MKLQPF Trigger: AAAAGGCTGGAGCTTCATGCATCCTGGGAGGCTCAC...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACCATAAACACACCCTTTaGGGGGCTGAGCATTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: WRNTGAQFPPETNICLMHHKHTL*GAEHLE Trigger: TTCCAAATGCTCAGCCCCCCAAAGGGTGTGTTTATG...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGTTCCTGGCTTCTGCTTaGCTTAGGTTCTCCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWFLASA*LRFSSG Trigger: ACCAGAGGAGAACCTAAGTCAAGCAGAAGCCAGGAA...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCAGACCACAACTTTCCATaGCGTGTCACAAGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPDHNFP*RVTRGA Trigger: TGCTCCTCTTGTGACACGTCATGGAAAGTTGTGGTC...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACTTGCATCCACCTCCCTaGAAATCCTCTCCTACATTA | + |
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Preference number: 4 (lower is better) Translates to: WRNTGAQFPPETNICLMHLHPPP*KSSPTL Trigger: TAATGTAGGAGAGGATTTTCAGGGAGGTGGATGCAA...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATAACAGGGTACTTGTCTaGCAGCCGCTTATCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHNRVLV*QPLIWP Trigger: TGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTT...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR GCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATCCCATCAGGACTCAGTaGTCCCCAAAAGTTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHPIRTQ*SPKVGP Trigger: TGGTCCAACTTTTGGGGAGCACTGAGTCCTGATGGG...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTTCGTGGGGACTCAATaGAGCAATTATACCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSAFVGTQ*SNYTSE Trigger: TTCTGAGGTATAATTGCTCCATTGAGTCCCCACGAA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGGCTCCAGCCTTTTCGTaGGGACTCAATGGAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWAPAFS*GLNGAI Trigger: AATTGCTCCATTGAGTCCCCACGAAAAGGCTGGAGC...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACCGGAGTGTCTTTCCTTaGATTAAGTACACATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: WRNTGAQFPPETNICLMHRSVFP*IKYTLA Trigger: GGCTAATGTGTACTTAATTCAAGGAAAGACACTCCG...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCGTTGTAATTAGCAGTTaGTATCAGCCGTCCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSAVVISS*YQPSKF Trigger: GAATTTGGACGGCTGATATCAACTGCTAATTACAAC...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCAGTGCTCCCCAAAAGTTaGACCACAACTTTCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPVLPKS*TTTFHD Trigger: GTCATGGAAAGTTGTGGTCCAACTTTTGGGGAGCAC...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGGTGCTCCCCAAAAGTTaGACCACAACTTTCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWVLPKS*TTTFHD Trigger: GTCATGGAAAGTTGTGGTCCAACTTTTGGGGAGCAC...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCACAAGAGGAGCAATaGTTTTCCTGTTTTGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TCPGGTQGPNFHQKRTSASQEEQ*FSCFVQ Trigger: TTGAACAAAACAGGAAAATCATTGCTCCTCTTGTGA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATTGCATCCACCTCCCTaGAAATCCTCTCCTACATTA | + |
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Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPLHPPP*KSSPTL Trigger: TAATGTAGGAGAGGATTTTCAGGGAGGTGGATGCAA...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACCACATTAGCCATATATaGGACATTCCAGATTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: WRNTGAQFPPETNICLMHHISHI*DIPDSY Trigger: GTAGGAATCTGGAATGTCCCATATATGGCTAATGTG...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGACCTTCAGTGTGACTaGAGCAATGAACTCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHDLQCD*SNELSD Trigger: ATCCGAGAGTTCATTGCTCCAGTCACACTGAAGGTC...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR TCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATAACTCTCGGATGAAATaGAGCCAAACATTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHNSRMK*SQTFSS Trigger: GCTGGAGAATGTTTGGCTTCATTTCATCCGAGAGTT...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTCCCATCAGGACTCAGTaGTCCCCAAAAGTTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSPIRTQ*SPKVGP Trigger: TGGTCCAACTTTTGGGGAGCACTGAGTCCTGATGGG...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGTTCGTGGGGACTCAATaGAGCAATTATACCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWFVGTQ*SNYTSE Trigger: TTCTGAGGTATAATTGCTCCATTGAGTCCCCACGAA...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTGACCACAACTTTCCATaGCGTGTCACAAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSDHNFP*RVTRGA Trigger: TGCTCCTCTTGTGACACGTCATGGAAAGTTGTGGTC...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGGCGCTGTCTTTCAGGTaGGTACTTTACTACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWALSFR*VLYYKI Trigger: AATTTTGTAGTAAAGTACTCACCTGAAAGACAGCGC...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTATTCTTCTTGTCTTCTCAAGTACAACTTCAGAGACATGTTCACGCCAGTCATTCCTGCAGATTCCACTaGTGGACCAGACGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFFLSSQVQLQRHVHASHSCRFH*WTRRLM Trigger: CATCAGCCGTCTGGTCCAGCAGTGGAATCTGCAGGA...ATGACTGGCGTGAACATGTCTCTGAAGTTGTACTTGAGAAGACAAGAAGAATAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGCCCATTTCCATTAATTaGCACTGGCAGTGTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWPISIN*HWQCFI Trigger: TATGAAACACTGCCAGTGGCAATTAATGGAAATGGG...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGGTTGAAGGGCTTCTTTaGGATAATCCAGTGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWVEGLL*DNPVLT Trigger: TGTTAACACTGGATTATCCCAAAGAAGCCCTTCAAC...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTCCATGCCCATGTTCCTaGCTTCTGCTTGACTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSPCPCS*LLLDLG Trigger: ACCTAAGTCAAGCAGAAGCCAGGAACATGGGCATGG...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGCACATTAGCCATATATaGGACATTCCAGATTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWHISHI*DIPDSY Trigger: GTAGGAATCTGGAATGTCCCATATATGGCTAATGTG...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGCGCTGTCTTTCAGGTaGGTACTTTACTACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHALSFR*VLYYKI Trigger: AATTTTGTAGTAAAGTACTCACCTGAAAGACAGCGC...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATTAGGGATCTATAAATaGCACTGCAATGTATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPLGIYK*HCNVSC Trigger: ACACGATACATTGCAGTGTCATTTATAGATCCCTAA...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATAGTGAGCCTCCCAGGATaGATGAAGCTCCAGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLIVSLPG*MKLQPF Trigger: AAAAGGCTGGAGCTTCATGCATCCTGGGAGGCTCAC...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGTTGAAGGGCTTCTTTaGGATAATCCAGTGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHVEGLL*DNPVLT Trigger: TGTTAACACTGGATTATCCCAAAGAAGCCCTTCAAC...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTGACCTTCAGTGTGACTaGAGCAATGAACTCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSDLQCD*SNELSD Trigger: ATCCGAGAGTTCATTGCTCCAGTCACACTGAAGGTC...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCTTCTTGTCTTCTCAAGTACAACTTCAGAGACATGTTCACGCCAGTCATTTCCTGGCTTCTGCTTaGCTTAGGTTCTCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFFLSSQVQLQRHVHASHFLASA*LRFSSG Trigger: ACCAGAGGAGAACCTAAGTCAAGCAGAAGCCAGGAA...ATGACTGGCGTGAACATGTCTCTGAAGTTGTACTTGAGAAGACAAGAAGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATTCACAAGAGGAGCAATaGTTTTCCTGTTTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRTSASCTVPFQWLCFHSQEEQ*FSCFVQ Trigger: TTGAACAAAACAGGAAAATCATTGCTCCTCTTGTGA...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGTGTCAAAACAACATCTaGATCCACACTAAAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETNICLMHCSFPVAMLPWCQNNI*IHTKVV Trigger: TACTACTTTAGTGTGGATGCAGATGTTGTTTTGACA...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATAACAGGAAGTCCTTCGTaGAAATGTGTGAGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLITGSPS*KCVSLP Trigger: TGGGAGGCTCACACATTTGCACGAAGGACTTCCTGT...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATCCATTAATTGCCACTaGCAGTGTTTCATAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PETNICLMHCSFPVAMLPSINCH*QCFIKC Trigger: ACATTTTATGAAACACTGCCAGTGGCAATTAATGGA...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATAGCTCCAGCCTTTTCGTaGGGACTCAATGGAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLIAPAFS*GLNGAI Trigger: AATTGCTCCATTGAGTCCCCACGAAAAGGCTGGAGC...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTATTCTTCTTGTCTTCTCAAGTACAACTTCAGAGACATGTTCACGCCAGTCATCAGCAGCCCGTCCGCTaGAAAGACGATTTTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFFLSSQVQLQRHVHASHQQPVR*KDDFMI Trigger: AATCATAAAATCGTCTTTGCAGCGGACGGGCTGCTG...ATGACTGGCGTGAACATGTCTCTGAAGTTGTACTTGAGAAGACAAGAAGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCTTCTTGTCTTCTCAAGTACAACTTCAGAGACATGTTCACGCCAGTCATAACTCTCGGATGAAATaGAGCCAAACATTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFLSSQVQLQRHVHASHNSRMK*SQTFSS Trigger: GCTGGAGAATGTTTGGCTTCATTTCATCCGAGAGTT...ATGACTGGCGTGAACATGTCTCTGAAGTTGTACTTGAGAAGACAAGAAGAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTCTCGTTCAGAAAATATaGGAAACCAGAAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSLVQKI*ETRRHL Trigger: CAGATGTCTTCTGGTTTCCCATATTTTCTGAACGAG...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCTTCTTGTCTTCTCAAGTACAACTTCAGAGACATGTTCACGCCAGTCATCGGAGTGTCTTTCCTTaGATTAAGTACACATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFLSSQVQLQRHVHASHRSVFP*IKYTLA Trigger: GGCTAATGTGTACTTAATTCAAGGAAAGACACTCCG...ATGACTGGCGTGAACATGTCTCTGAAGTTGTACTTGAGAAGACAAGAAGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTTTAGGGATCTATAAATaGCACTGCAATGTATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSLGIYK*HCNVSC Trigger: ACACGATACATTGCAGTGTCATTTATAGATCCCTAA...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTTATACCTCAGAAATTTaGATCCACCTCCCTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSYTSEI*IHLPEN Trigger: ATTTTCAGGGAGGTGGATGCAAATTTCTGAGGTATA...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATAGTTGTAATTAGCAGTTaGTATCAGCCGTCCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLIVVISS*YQPSKF Trigger: GAATTTGGACGGCTGATATCAACTGCTAATTACAAC...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATACTCGTTCAGAAAATATaGGAAACCAGAAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLILVQKI*ETRRHL Trigger: CAGATGTCTTCTGGTTTCCCATATTTTCTGAACGAG...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATATATACCTCAGAAATTTaGATCCACCTCCCTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLIYTSEI*IHLPEN Trigger: ATTTTCAGGGAGGTGGATGCAAATTTCTGAGGTATA...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCCTAATTCCTGGAAAACAGCCCTACACAGAGGTCAATGTGACTTAATATGTCAAAACAACATCTaGATCCACACTAAAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSWKTALHRGQCDLICQNNI*IHTKVV Trigger: TACTACTTTAGTGTGGATGCAGATGTTGTTTTGACA...TATTAAGTCACATTGACCTCTGTGTAGGGCTGTTTTCCAGGAATTAGGAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS GCA 90 bp | AGAATTCAGGTAGCGTTTCCCAATGTGCACAACAGGGTACTTGTCTaGCAGCCGCTTATCTGGCCACAGCAGCCCGTCCGCTGCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RIQVAFPNVHNRVLV*QPLIWPQQPVRCKD Trigger: GTCTTTGCAGCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCACATTGGGAAACGCTACCTGAATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTGCACAACAGGGTACTaGTCTGCCAGCCGCTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: TCPGGTQGPNFHQKRTSACTTGY*SASRLS Trigger: AGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCCCTGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCTCCACTCCTGACCTaGACCAAGAACCTTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCPGGTQGPNFHQKRTSASPLLT*TKNLHS Trigger: ACTGTGAAGGTTCTTGGTCAAGGTCAGGAGTGGAGA...GGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCAGGGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGGAACACAGGGGCCCAATTTCCACCAGAAACGAACATCTGCCTCATGCACTGCACAACAGGGTACTaGTCTGCCAGCCGCTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: WRNTGAQFPPETNICLMHCTTGY*SASRLS Trigger: AGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCA...GTGCATGAGGCAGATGTTCGTTTCTGGTGGAAATTGGGCCCCTGTGTTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS CCA 90 bp | TTTCCCAATGTGCACAACAGGGTACTTGTCTGCCAGCCGCTTATCTaGCCACAGCAGCCCGTCCGCTGCAAAGACGATTTTATGATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FPNVHNRVLVCQPLI*PQQPVRCKDDFMIC Trigger: ACAAATCATAAAATCGTCTTTGCAGCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCACATTGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | GAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGGTCTCCACTCCTGACCTaGACCAAGAACCTTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ETNICLMHCSFPVAMLPWSPLLT*TKNLHS Trigger: ACTGTGAAGGTTCTTGGTCAAGGTCAGGAGTGGAGA...CCATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS CCA 90 bp | CCTACATTATTCAGAGCAATGTTGATGGTAAAGGTTGAGGCATCGTaGTGGGGACGGAGCGAGCGCTGTCTTTCAGGTGAGTACTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: PTLFRAMLMVKVEAS*WGRSERCLSGEYFT Trigger: AGTAAAGTACTCACCTGAAAGACAGCGCTCGCTCCGTCCCCACCACGATGCCTCAACCTTTACCATCAACATTGCTCTGAATAATGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS CCA 90 bp | CAAATGTGTGAGCCTCCCAGGATGCATGAAGCTCCAGCCTTTTCGTaGGGACTCAATGGAGCAATTATACCTCAGAAATTTGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QMCEPPRMHEAPAFS*GLNGAIIPQKFAST Trigger: GGTGGATGCAAATTTCTGAGGTATAATTGCTCCATTGAGTCCCCACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGGCTCACACATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATCCCATATCTCTAGCATaGCGGCAAAGAGCCATATCG | + |
|
Preference number: 5 (lower is better) Translates to: QKRTSASCTVPFQWLCFHPISLA*RQRAIS Trigger: CGATATGGCTCTTTGCCGCAATGCTAGAGATATGGG...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070522.14 |
||
| CDS GCA 90 bp | TCATATGAATATCGTCAGTCGGGACATTTTCATAACCACCCGATATaGGGCTATCGTGATGCTTTCCGCCGGACCACTTGCCATAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYEYRQSGHFHNHPI*GYRDAFRRTTCHNA Trigger: AGCATTATGGCAAGTGGTCCGGCGGAAAGCATCACGATAGCCGCATATCGGGTGGTTATGAAAATGTCCCGACTGACGATATTCATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS CCA 90 bp | ACATTATTCAGAGCAATGTTGATGGTAAAGGTTGAGGCATCGTGGTaGGGACGGAGCGAGCGCTGTCTTTCAGGTGAGTACTTTACTACA | + |
|
Preference number: 5 (lower is better) Translates to: TLFRAMLMVKVEASW*GRSERCLSGEYFTT Trigger: TGTAGTAAAGTACTCACCTGAAAGACAGCGCTCGCTCCGTCCCCACCACGATGCCTCAACCTTTACCATCAACATTGCTCTGAATAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCAATCTGCCAGAAGTCATaGTTAAGATGGGAAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PETNICLMHCSFPVAMLPICQKS*LRWEVL Trigger: CAACACTTCCCATCTTAACAATGACTTCTGGCAGAT...TGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATGCAGTGCAAATCCCTTaGTATAATAGCCTGCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: QKRTSASCTVPFQWLCFHAVQIP*YNSLRR Trigger: TCTTCGCAGGCTATTATACAAAGGGATTTGCACTGC...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CAA 90 bp | CAGAAACGAACATCTGCCTCATGCACTGTTCCTTTCCAGTGGCTATGCTTCCATATCTGCCAGAAGTCATaGTTAAGATGGGAAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: QKRTSASCTVPFQWLCFHICQKS*LRWEVL Trigger: CAACACTTCCCATCTTAACAATGACTTCTGGCAGAT...ATGGAAGCATAGCCACTGGAAAGGAACAGTGCATGAGGCAGATGTTCGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 90 bp | TGCAAATCCCTTTGTATAATAGCCTGCGAAGACCTTCAGTGTGACTaGAGCAATGAACTCTCGGATGAAATGAAGCCAAACATTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CKSLCIIACEDLQCD*SNELSDEMKPNILQ Trigger: CTGGAGAATGTTTGGCTTCATTTCATCCGAGAGTTCATTGCTCCAGTCACACTGAAGGTCTTCGCAGGCTATTATACAAAGGGATTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTGTCATATCTCTAGCATaGCGGCAAAGAGCCATATCG | + |
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Preference number: 5 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSVISLA*RQRAIS Trigger: CGATATGGCTCTTTGCCGCAATGCTAGAGATATGAC...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160359.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTGCAGTGCAAATCCCTTaGTATAATAGCCTGCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSAVQIP*YNSLRR Trigger: TCTTCGCAGGCTATTATACAAAGGGATTTGCACTGC...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCAACTACCAACTATAGTCAAGGGTAAGGAACAGGCTCAAAAACCATCTCCTGTGTCCATGAGTTaGGAACATAGTTTCCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: RDQLPTIVKGKEQAQKPSPVSMS*EHSFQS Trigger: ACTTTGGAAACTATGTTCCAAACTCATGGACACAGG...AGATGGTTTTTGAGCCTGTTCCTTACCCTTGACTATAGTTGGTAGTTGGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 90 bp | GACTCAATGGAGCAATTATACCTCAGAAATTTGCATCCACCTCCCTaGAAATCCTCTCCTACATTATTCAGAGCAATGTTGATGGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: DSMEQLYLRNLHPPP*KSSPTLFRAMLMVK Trigger: CTTTACCATCAACATTGCTCTGAATAATGTAGGAGAGGATTTTCAGGGAGGTGGATGCAAATTTCTGAGGTATAATTGCTCCATTGAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 90 bp | CTGCCAGAAGTCATTGTTAAGATGGGAAGTGTTGTAATTAGCAGTTaGTATCAGCCGTCCAAATTCATGTCTGTTAGAAATGTACATAAA | + |
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Preference number: 5 (lower is better) Translates to: LPEVIVKMGSVVISS*YQPSKFMSVRNVHK Trigger: TTTATGTACATTTCTAACAGACATGAATTTGGACGGCTGATATCAACTGCTAATTACAACACTTCCCATCTTAACAATGACTTCTGGCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | GTAGCGTTTCCCAATGTGCACAACAGGGTACTTGTCTaGCAGCCGCTTATCTGGCCACAGCAGCCCGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: VAFPNVHNRVLV*QPLIWPQQPVR Trigger: GCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCACATTGGGAAACGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 72 bp | GTGCACAACAGGGTACTTGTCTGCCAGCCGCTTATCTaGCCACAGCAGCCCGTCCGCTGCAAAGACGATTTT | + |
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Preference number: 6 (lower is better) Translates to: VHNRVLVCQPLI*PQQPVRCKDDF Trigger: AAAATCGTCTTTGCAGCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCAGACAAGTACCCTGTTGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | GGAAGTCCTTCGTGCAAATGTGTGAGCCTCCCAGGATaGATGAAGCTCCAGCCTTTTCGTGGGGACTCAATG | + |
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Preference number: 6 (lower is better) Translates to: GSPSCKCVSLPG*MKLQPFRGDSM Trigger: CATTGAGTCCCCACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGGCTCACACATTTGCACGAAGGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 72 bp | AGAGCAATGTTGATGGTAAAGGTTGAGGCATCGTGGTaGGGACGGAGCGAGCGCTGTCTTTCAGGTGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: RAMLMVKVEASW*GRSERCLSGEY Trigger: GTACTCACCTGAAAGACAGCGCTCGCTCCGTCCCCACCACGATGCCTCAACCTTTACCATCAACATTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 72 bp | TTCAGAGCAATGTTGATGGTAAAGGTTGAGGCATCGTaGTGGGGACGGAGCGAGCGCTGTCTTTCAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FRAMLMVKVEAS*WGRSERCLSGE Trigger: CTCACCTGAAAGACAGCGCTCGCTCCGTCCCCACCACGATGCCTCAACCTTTACCATCAACATTGCTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | TATCGTCAGTCGGGACATTTTCATAACCACCCGATATaGGGCTATCGTGATGCTTTCCGCCGGACCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: YRQSGHFHNHPI*GYRDAFRRTTC Trigger: GCAAGTGGTCCGGCGGAAAGCATCACGATAGCCGCATATCGGGTGGTTATGAAAATGTCCCGACTGACGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 72 bp | ATCGTGGTGGGGACGGAGCGAGCGCTGTCTTTCAGGTaGGTACTTTACTACAAAATTCAGCAGTGCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: IVVGTERALSFR*VLYYKIQQCKS Trigger: GGATTTGCACTGCTGAATTTTGTAGTAAAGTACTCACCTGAAAGACAGCGCTCGCTCCGTCCCCACCACGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | TGCCAGCCGCTTATCTGGCCACAGCAGCCCGTCCGCTaGAAAGACGATTTTATGATTTGTCTTTTGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: CQPLIWPQQPVR*KDDFMICLLEL Trigger: AAGTTCCAAAAGACAAATCATAAAATCGTCTTTGCAGCGGACGGGCTGCTGTGGCCAGATAAGCGGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 72 bp | TTTCATCCTGACGGCAGAAATCCATGCCCATGTTCCTaGCTTCTGCTTGACTTAGGTTCTCCTCTGGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: FHPDGRNPCPCS*LLLDLGSPLVL Trigger: TAGGACCAGAGGAGAACCTAAGTCAAGCAGAAGCCAGGAACATGGGCATGGATTTCTGCCGTCAGGATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CCA 72 bp | CATAGTACCCATCAGGACTCAGTGCTCCCCAAAAGTTaGACCACAACTTTCCATGACGTGTCACAAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HSTHQDSVLPKS*TTTFHDVSQEE Trigger: CTCCTCTTGTGACACGTCATGGAAAGTTGTGGTCCAACTTTTGGGGAGCACTGAGTCCTGATGGGTACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | ATATGCGGCTATCGTGATGCTTTCCGCCGGACCACTTaGCATAATGCTCCATTTCTTCTACCAACTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ICGYRDAFRRTT*HNAPFLLPTHH Trigger: GTGATGAGTTGGTAGAAGAAATGGAGCATTATGGCAAGTGGTCCGGCGGAAAGCATCACGATAGCCGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 72 bp | TTCAGTGTGACTGGAGCAATGAACTCTCGGATGAAATaGAGCCAAACATTCTCCAGCCCGATCTGCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: FSVTGAMNSRMK*SQTFSSPICFI Trigger: TATGAAGCAGATCGGGCTGGAGAATGTTTGGCTTCATTTCATCCGAGAGTTCATTGCTCCAGTCACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 72 bp | TGTGGAATCCATCATTTTCTTTTGTTGCGACAGTTATaGCTAATAATTTATCTGCAGGGATGCGCCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CGIHHFLLLRQL*LIIYLQGCARA Trigger: CGCCCGGGCGCATCCCTGCAGATAAATTATTAGTCATAACTGTCGCAACAAAAGAAAATGATGGATTCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CAA 72 bp | GGGGTTGGTTGTTCAATAAAAACACCCAGTGTAACCTaGGGAGGGACATCTACTGTAGACAAGTCAATTGTG | + |
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Preference number: 6 (lower is better) Translates to: GVGCSIKTPSVT*GGTSTVDKSIV Trigger: CACAATTGACTTGTCTACAGTAGATGTCCCTCCCAAGGTTACACTGGGTGTTTTTATTGAACAACCAACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS CAA 90 bp | GGTAGAAAGGGGGTTGGTTGTTCAATAAAAACACCCAGTGTAACCTaGGGAGGGACATCTACTGTAGACAAGTCAATTGTGTCAACATCA | + |
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Preference number: 6 (lower is better) Translates to: GRKGVGCSIKTPSVT*GGTSTVDKSIVSTS Trigger: TGATGTTGACACAATTGACTTGTCTACAGTAGATGTCCCTCCCAAGGTTACACTGGGTGTTTTTATTGAACAACCAACCCCCTTTCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | GTGGGGACTCAATGGAGCAATTATACCTCAGAAATTTaGATCCACCTCCCTGAAAATCCTCTCCTACATTAT | + |
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Preference number: 6 (lower is better) Translates to: VGTQWSNYTSEI*IHLPENPLLHY Trigger: ATAATGTAGGAGAGGATTTTCAGGGAGGTGGATGCAAATTTCTGAGGTATAATTGCTCCATTGAGTCCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 72 bp | GAGCAATTATACCTCAGAAATTTGCATCCACCTCCCTaGAAATCCTCTCCTACATTATTCAGAGCAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: EQLYLRNLHPPP*KSSPTLFRAML Trigger: CAACATTGCTCTGAATAATGTAGGAGAGGATTTTCAGGGAGGTGGATGCAAATTTCTGAGGTATAATTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS TCA 72 bp | GTCATTGTTAAGATGGGAAGTGTTGTAATTAGCAGTTaGTATCAGCCGTCCAAATTCATGTCTGTTAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: VIVKMGSVVISS*YQPSKFMSVRN Trigger: ATTTCTAACAGACATGAATTTGGACGGCTGATATCAACTGCTAATTACAACACTTCCCATCTTAACAATGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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| CDS GCA 72 bp | TCCTCTGGTCCTACTATTTTTATAGAGCTGATGTCATaGTTAGCTTTATCAACAAACACTTTGATGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSGPTIFIELMS*LALSTNTLMSF Trigger: AAAGGACATCAAAGTGTTTGTTGATAAAGCTAAGCATGACATCAGCTCTATAAAAATAGTAGGACCAGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070522.14 ENSMUST00000160359.2 |
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