Pregenerated sensors for PLOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019055Ensembl transcript IDs: ENSMUST00000019199.14, ENSMUST00000105712.2, ENSMUST00000149129.3
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAACTCTCGTCTCTGTCCCTGTCTCCAGAGGCATCGGGACAGGGTaGCCCAGTACAGTGTGGACATATGCCCCTCCCCCAAGCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RTLVSVPVSRGIGTG*PSTVWTYAPPPSRV Trigger: GACCCTGCTTGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACAGGGACAGAGACGAGAGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 90 bp | GGCCACGAGGCACTGGGTTTGAGAGACAGGAGTCCCACAGTCTACTaGCAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: GHEALGLRDRSPTVY*QSVLPAMGSHNAPC Trigger: GCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGACTGTGGGACTCCTGTCTCTCAAACCCAGTGCCTCGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 90 bp | TCAGGAATCAGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTaGGCAGTGGTTGTCAACGATGAGATAGGTCGAACAGAGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SGIRGWIGFLGPKGC*AVVVNDEIGRTEAG Trigger: GCCTGCCTCTGTTCGACCTATCTCATCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 90 bp | GAGTGGGTGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTaGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: EWVPHLWPAPHRSNW*LQELQEFRNQRLDW Trigger: CCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCACCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 90 bp | CTGGAGTGGGTGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTaGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LEWVPHLWPAPHRSN*WLQELQEFRNQRLD Trigger: ATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCACCCACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 90 bp | TGGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTaGGTTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGA | + |
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Preference number: 1 (lower is better) Translates to: WWLQELQEFRNQRLD*VPWPQGLLGSGCQR Trigger: TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR GCA 90 bp | AGTTCAGGAATCAGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTaGTGGGCAGTGGTTGTCAACGATGAGATAGGTCGAACAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SSGIRGWIGFLGPKG*WAVVVNDEIGRTEA Trigger: TGCCTCTGTTCGACCTATCTCATCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 90 bp | AACGCAAGTCTTCAAGGCTTGGTAACTGAGCCGCCTTCCCAGCCCTaGAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTT | + |
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Preference number: 1 (lower is better) Translates to: NASLQGLVTEPPSQP*NPFFREGKCGQQVL Trigger: AAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAGTTACCAAGCCTTGAAGACTTGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| 3UTR TCA 90 bp | AATCAGTCCATGGGTCTTAAACGCAAGTCTTCAAGGCTTGGTAACTaGGCCGCCTTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: NQSMGLKRKSSRLGN*AAFPALKSLLQGGK Trigger: TTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAGTTACCAAGCCTTGAAGACTTGCGTTTAAGACCCATGGACTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCCCCAAGTGGGTGCCCCATCTCTaGCCTGCACCCCATCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RHRDRVTQYSVDICPSPKWVPHL*PAPHRS Trigger: GGAACGATGGGGTGCAGGCCAGAGATGGGGCACCCA...CTTGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | AGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCCCCAAGGTCCTAGGTTCGGGGTaGAGTTGGGGTAGGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RHRDRVTQYSVDICPSPKVLGSG*SWGRWV Trigger: AACCCACCTACCCCAACTCCACCCCGAACCTAGGAC...CTTGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR GCA 90 bp | TCTACTGACAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGCTGATGCCCCATCTCTGGCCTaGACCCCATCGTTCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: STDSLSFQPWALTTLPADAPSLA*TPSFQL Trigger: CAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGC...ATCAGCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTGGCCCCAAGGGCTGCTaGGCAGTGGTTGTCAACGAT | + |
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Preference number: 2 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSGPKGC*AVVVND Trigger: ATCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCC...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | TCTACTGACAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGCTGATAGCTCCGTCGAAGTCTaGCCCCAGGGAAAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: STDSLSFQPWALTTLPADSSVEV*PQGKSE Trigger: CTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCT...ATCAGCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGGGTTGACCCAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGTTGGATTGGGTTCCTTaGCCCCAAGGGCTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VGGLTQTLVALILETESWLDWVP*PQGLLG Trigger: GCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAA...CCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTGGGTCAACCCACCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | ACAACGCTCCCTGCTGATATCGCATGTATGCTGGCCCACCCCAGGCATCTCTCATCAGGAATCAGAGGTTaGATTGGGTTCCTTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TTLPADIACMLAHPRHLSSGIRG*IGFLGP Trigger: GGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGA...TGAGAGATGCCTGGGGTGGGCCAGCATACATGCGATATCAGCAGGGAGCGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | TATCGCATGTATGCTGGCCCACCCCAGGCATCTCTCATACAGTGGTTTGAACGATTAGTGGGAGCACCATaGGCAGCCCCAGTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: YRMYAGPPQASLIQWFERLVGAP*AAPVLE Trigger: CTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAA...TCGTTCAAACCACTGTATGAGAGATGCCTGGGGTGGGCCAGCATACATGCGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CAA 90 bp | CCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTaGACACGACAGAAGGGAAGGAGCACAGAGGCCACAGTGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: PEIPSSGRESVASKY*TRQKGRSTEATVTL Trigger: TAGGGTCACTGTGGCCTCTGTGCTCCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTAGTGGTTGTCAACGATaGGATAGGTCGAACAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSSGCQR*DRSNRG Trigger: GCCTCTGTTCGACCTATCTCATCGTTGACAACCACT...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CCA 90 bp | TATCGCATGTATGCTGGCCCACCCCAGGCATCTCTCATACAGTGGTTTGAACGACATCGTTCCAACTGGTaGCTTCAAGAGCTACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YRMYAGPPQASLIQWFERHRSNW*LQELQE Trigger: CTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATG...TCGTTCAAACCACTGTATGAGAGATGCCTGGGGTGGGCCAGCATACATGCGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 72 bp | GTCTCTGTCCCTGTCTCCAGAGGCATCGGGACAGGGTaGCCCAGTACAGTGTGGACATATGCCCCTCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VSVPVSRGIGTG*PSTVWTYAPPP Trigger: TGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACAGGGACAGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 72 bp | GAGCGTTACCATCTCCTGAGATTAGTGGGAGCACCATaGGCAGCCCCAGTCCTGGAGTGGGTGCCCCATCTC | + |
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Preference number: 3 (lower is better) Translates to: ERYHLLRLVGAP*AAPVLEWVPHL Trigger: GAGATGGGGCACCCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTAACGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 72 bp | CTTCAAGGCTTGGTAACTGAGCCGCCTTCCCAGCCCTaGAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LQGLVTEPPSQP*NPFFREGKCGQ Trigger: CTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAGTTACCAAGCCTTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| 3UTR CCA 72 bp | CAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTTaGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGA | + |
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Preference number: 3 (lower is better) Translates to: QEFRNQRLDWVP*PQGLLGSGCQR Trigger: TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 72 bp | CCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTaGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PHLWPAPHRSNW*LQELQEFRNQR Trigger: CCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 72 bp | GTGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTaGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAG | + |
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Preference number: 3 (lower is better) Translates to: VPHLWPAPHRSN*WLQELQEFRNQ Trigger: CTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 72 bp | AGGTGGGTTGACCCAGACCTTGGTGGCACTGATACTTaGAACAGAATCCTGGGGGCTAGCCCTTCCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: RWVDPDLGGTDT*NRILGASPSRA Trigger: AGCTCTGGAAGGGCTAGCCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTGGGTCAACCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 72 bp | CTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTaGCACGACAGAAGGGAAGGAGCACAGAGGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: LLQGGKVWPAST*HDRREGAQRPQ Trigger: CTGTGGCCTCTGTGCTCCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| 3UTR CCA 72 bp | AGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTaGGCAGTGGTTGTCAACGATGAGATAGGTCGAACA | + |
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Preference number: 3 (lower is better) Translates to: RGWIGFLGPKGC*AVVVNDEIGRT Trigger: TGTTCGACCTATCTCATCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR TCA 72 bp | TGCTGGCCCACCCCAGGCATCTCTCATACAGTGGTTTaGACGACATTTAATAGAACTCTCGTCTCTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CWPTPGISHTVV*TTFNRTLVSVP Trigger: AGGGACAGAGACGAGAGTTCTATTAAATGTCGTTCAAACCACTGTATGAGAGATGCCTGGGGTGGGCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR CCA 72 bp | ATGTATGCTGGCCCACCCCAGGCATCTCTCATACAGTaGTTTGAACGACATTTAATAGAACTCTCGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: MYAGPPQASLIQ*FERHLIELSSL Trigger: CAGAGACGAGAGTTCTATTAAATGTCGTTCAAACCACTGTATGAGAGATGCCTGGGGTGGGCCAGCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| 3UTR-3UTR CAA 90 bp | TATTTATTTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAAGTGGCCAGCAAGTACTaGACACGACAGAAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: YLFSVYGYRCGGKRTPCQVASKY*TRQKGR Trigger: CCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCAC...TTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAAATAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR GCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTGTGAGCCGCCCGGGGTaGAGGAGGGCCCAGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSVSRPG*RRAQPF Trigger: GAAGGGCTGGGCCCTCCTGCACCCCGGGCGGCTCAC...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | TACCATCTCCTGAGATTAGTGGGAGCACCATGGGCAGCCCCAGTCCTGGAGTGGCCTCGTGATAGTGTGTaGGCCGCCCGGGGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YHLLRLVGAPWAAPVLEWPRDSV*AARGAG Trigger: TCCTGCACCCCGGGCGGCTCACACACTATCACGAGG...CCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCTCGCTGTCACTGTCCTaGCCTTCCCACTCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: LQRHRDRVTQYSVDICPSSLSLS*PSHSAT Trigger: GGTGGCCGAGTGGGAAGGCCAGGACAGTGACAGCGA...GGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | AGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGATCCTGGCGTCGGCGTTaGCCATGCGCACCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RLDWVPWPQGLLGSGCQRSWRRR*PCAPQD Trigger: GTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGA...TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | TACCATCTCCTGAGATTAGTGGGAGCACCATGGGCAGCCCCAGTCCTGGAGTGGCTGCGCCCATGTTCCTaGCGTCGGCGTTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: YHLLRLVGAPWAAPVLEWLRPCS*RRRWPC Trigger: GCATGGCCAACGCCGACGCCAGGAACATGGGCGCAG...CCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | TCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGGGACTGAGCTGAACGCTTaGAGCGGCGGAAGCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQAAPSKSGPRESQRKKGTELNA*SGGSPQ Trigger: CTGAGGGCTTCCGCCGCTTCAAGCGTTCAGCTCAGT...CCCCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | CTGTCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCGTGGGCCCATTGCCATaGACGACCACTGGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSPEASGQGDPVQCGHMPVGPLP*TTTGRV Trigger: CACCCTCCCAGTGGTCGTTCATGGCAATGGGCCCAC...GGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR GCA 90 bp | TACCATCTCCTGAGATTAGTGGGAGCACCATGGGCAGCCCCAGTCCTGGAGTGGAGCCCAGGAACCGCTTaGCGTCGGGGACTGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: YHLLRLVGAPWAAPVLEWSPGTA*RRGLWD Trigger: ATCCCACAGTCCCCGACGGCAAGCGGTTCCTGGGCT...CCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCCTCGTCACACACGGTaGAGCCCGTCTCGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSPEASGQGDPVQCGHMPPRHTR*SPSRRS Trigger: GGACCTTCGAGACGGGCTGCACCGTGTGTGACGAGG...GGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGGGCCCAGCCCTTCCTTaGTGCCCTCACGGAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRGPALP*CPHGAV Trigger: AACTGCTCCGTGAGGGCACCAAGGAAGGGCTGGGCC...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | TCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCGGCCACCAGTTTGCTaGGGCTGGGGGCATAACCAA | + |
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Preference number: 4 (lower is better) Translates to: SPEASGQGDPVQCGHMPLRPPVC*GWGHNQ Trigger: TTGGTTATGCCCCCAGCCTCAGCAAACTGGTGGCCG...GAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGCACAGGCCGCCTCCGTaGAGATGGGGAACCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRHRPPP*RWGTSR Trigger: TCTACTGGTTCCCCATCTTCACGGAGGCGGCCTGTG...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR GCA 90 bp | CTGAGCCGCCTTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCTCCTCCACCTGCTGCTaGTGGTCCTCCATCCACACT | + |
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Preference number: 4 (lower is better) Translates to: LSRLPSPEIPSSGRESVASSTCC*WSSIHT Trigger: AGTGTGGATGGAGGACCAGCAGCAGCAGGTGGAGGA...GGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR GCA 90 bp | ACTCTCCAGCATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGACTTCTGTCCTCCACCTaGTGCTGCTGGTCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TLQHPRQLRRSLAPGKVRLLSST*CCWSSI Trigger: GATGGAGGACCAGCAGCAGCAGGTGGAGGACAGAAG...TCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATGCTGGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | TACCATCTCCTGAGATTAGTGGGAGCACCATGGGCAGCCCCAGTCCTGGAGTGGGCGGAGAAGACCACCTaGCTCTTGGCCTGCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YHLLRLVGAPWAAPVLEWAEKTT*LLACWN Trigger: GTTCCAGCAGGCCAAGAGCCAGGTGGTCTTCTCCGC...CCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCGCCATGAACGACCACTaGGAGGGTGTCATAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQRHRDRVTQYSVDICPSAMNDH*EGVIGQ Trigger: CTGGCCTATGACACCCTCCCAGTGGTCGTTCATGGC...GGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | TGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACGTGTGGGCTGCTCAATaGACACACCGACCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPISGLHPIVPTGGFKSYVWAAQ*THRPGQ Trigger: CTGTCCTGGTCGGTGTGTTCATTGAGCAGCCCACAC...GTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTATCCACCTGCTGCTGCTaGTCCTCCATCCACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPHLWPAPHRSNWWLQELSTCCC*SSIHTP Trigger: TGGAGTGTGGATGGAGGACCAGCAGCAGCAGGTGGA...TAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | TCTACTGACAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGCTGATGGACTGTGGGATACTTaGCCTCCAGCCTCCGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STDSLSFQPWALTTLPADGLWDT*PPASGP Trigger: CGGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCC...ATCAGCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGGGACTGTGGGATACTTaGCCTCCAGCCTCCGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFFREGKCGQQVLDTTEGGLWDT*PPASGP Trigger: CGGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCC...CCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGAAGGAGCTCGCTGTCACTGTCCTaGCCTTCCCACTCGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGRESVASKYLTRQKGRSSLSLS*PSHSAT Trigger: GGTGGCCGAGTGGGAAGGCCAGGACAGTGACAGCGA...GCTCCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGCACCGACCAGGACAGTaGGGAGAGCTTCATCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRHRPGQ*GELHPQ Trigger: TTGGGGATGAAGCTCTCCCCACTGTCCTGGTCGGTG...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACTGAGCTGAACGCTTaGAGCGGCGGAAGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPEIPSSGRESVASKYLTELNA*SGGSPQ Trigger: CTGAGGGCTTCCGCCGCTTCAAGCGTTCAGCTCAGT...CAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGAAGGAGCCGGCCACCAGTTTGCTaGGGCTGGGGGCATAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRESVASKYLTRQKGRSRPPVC*GWGHNQ Trigger: TTGGTTATGCCCCCAGCCTCAGCAAACTGGTGGCCG...GCTCCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCCCCAAGTGCCGTTCCTGGTTGTaGATGAAGAGCCGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHRDRVTQYSVDICPSPKCRSWL*MKSRIC Trigger: ACAGATGCGGCTCTTCATTCACAACCAGGAACGGCA...CTTGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | TGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGTGGCCAAAGGTGTaGCGGTTGGTCAGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: CPISGLHPIVPTGGFKSYRWPKV*RLVRNM Trigger: CATGTTCCTGACCAACCGGCACACCTTTGGCCACCT...GTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGGCGTCATCCTTCGCCTaGACCAGAAGAAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFFREGKCGQQVLDTTEGASSFA*TRRSQA Trigger: GGCCTGGCTTCTTCTGGTCCAGGCGAAGGATGACGC...CCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLQRHRDRVTQYSVDICPAPSRF*KIRQRW Trigger: CCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGC...GGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| 3UTR CAA 72 bp | CGGGGTGGAGTTGGGGTAGGTGGGTTGACCCAGACCTaGGTGGCACTGATACTTGAAACAGAATCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGGVGVGGLTQT*VALILETESWG Trigger: CCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTGGGTCAACCCACCTACCCCAACTCCACCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | AGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGACTTTTGTGGCCACAGTaGGGACCAGAAGGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLDWVPWPQGLLGSGCQRLLWPQ*GPEGCP Trigger: AGGACAACCTTCTGGTCCTCACTGTGGCCACAAAAG...TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCGTTGAAGAACTGAGCTaGACGCTTGAAGCGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPEASGQGDPVQCGHMPLVEELS*TLEAAE Trigger: TTCCGCCGCTTCAAGCGTTCAGCTCAGTTCTTCAAC...GAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCCATCCCCAATGCCCTTaGGGCTCCGTAGGCCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVASRATGVQESEVGLGSHPQCP*GSVGPR Trigger: ACGAGGGCCTACGGAGCCTCAAGGGCATTGGGGATG...GGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | AGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGAGCAGGGCACTGCCCTTaGTCAGGTAGATGTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLDWVPWPQGLLGSGCQRAGHCP*SGRCLR Trigger: TCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGC...TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | TACCATCTCCTGAGATTAGTGGGAGCACCATGGGCAGCCCCAGTCCTGGAGTGGTGCGTGCTTTTCCAGTaGCTTCTTCAGCAGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YHLLRLVGAPWAAPVLEWCVLFQ*LLQQPN Trigger: GTTCGGCTGCTGAAGAAGGCACTGGAAAAGCACGCA...CCACTCCAGGACTGGGGCTGCCCATGGTGCTCCCACTAATCTCAGGAGATGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | ACTCTCCAGCATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGACAGGTCTTCCTTGTCTaGGTGCTTTTCCAGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQHPRQLRRSLAPGKVRQVFLV*VLFQCL Trigger: AAGGCACTGGAAAAGCACGCAGACAAGGAAGACCTG...TCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATGCTGGAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTCAGACTGGTACTCACTaGCGTGCTCCGCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSQTGTH*RAPPGT Trigger: AGTTCCTGGCGGAGCACGGCAGTGAGTACCAGTCTG...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGGGGCTAGCCCTTCCAGCGTCATCCTTCGCCTaGACCAGAAGAAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLVALILETESWGLALPASSFA*TRRSQA Trigger: GGCCTGGCTTCTTCTGGTCCAGGCGAAGGATGACGC...TGGAAGGGCTAGCCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGTCCACCTGCTGCTGCTaGTCCTCCATCCACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFFREGKCGQQVLDTTEGSTCCC*SSIHTP Trigger: TGGAGTGTGGATGGAGGACCAGCAGCAGCAGGTGGA...CCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTTCAGCTGCAGCTTaGTGGGCCCATTGCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PISGLHPIVPTGGFKSYRSSAAA*WAHCHE Trigger: TTCATGGCAATGGGCCCACCAAGCTGCAGCTGAACT...CCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCACTAGCTTCACAGACTaGTACTCACTGCCGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPEASGQGDPVQCGHMPLTSFTD*YSLPCS Trigger: GGAGCACGGCAGTGAGTACCAGTCTGTGAAGCTAGT...GAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTGTAGAGGCGTCATGGTaGGGCATCAAGGAAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSVEASW*GIKEGC Trigger: GCAGCCTTCCTTGATGCCCCACCATGACGCCTCTAC...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTCTCCCCCAGGCCCAGTaGCTGGATCTTGTAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSLPQAQ*LDLVVE Trigger: TTCAACTACAAGATCCAGTCACTGGGCCTGGGGGAG...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGGGACTTCTGTCCTCCACCTaGTGCTGCTGGTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSSGRESVASKYLTRQKGLLSST*CCWSSI Trigger: GATGGAGGACCAGCAGCAGCAGGTGGAGGACAGAAG...TCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCGCCTTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCACCTGGCTCTTGGCCTaGTGGAACTTCTTTAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLPSPEIPSSGRESVATWLLA*WNFFKS Trigger: ACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCAGGT...GGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTGACCCAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGGGGCTATCCACCAGGAACTTGTaGCACTCCCGCTCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTQTLVALILETESWGLSTRNL*HSRSKV Trigger: CACCTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGA...TAGCCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTGGGTCAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCAGAGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCAGACCACCTGGCTCTTaGCCTGCTGGAACTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLQRHRDRVTQYSVDICPRPPGS*PAGTSL Trigger: TAAAGAAGTTCCAGCAGGCCAAGAGCCAGGTGGTCT...GGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCTCTGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGATGAGATAGGTCGATCCCCGCCAGGGCCTTaGTGTAATTCTCATGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGPKGCWAVVVNDEIGRSPPGP*CNSHGC Trigger: ACATCCATGAGAATTACACCAAGGCCCTGGCGGGGA...TCGACCTATCTCATCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| 3UTR CAA 72 bp | CCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTaGACACGACAGAAGGGAAGGAGCACAGAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSSGRESVASKY*TRQKGRSTEAT Trigger: TGTGGCCTCTGTGCTCCTTCCCTTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCGCCTTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCACTGGATCTTGTAGTTaGAGAACTGAGCTGAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLPSPEIPSSGRESVATGSCS*RTELNA Trigger: AGCGTTCAGCTCAGTTCTTCAACTACAAGATCCAGT...GGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGGGCCCATTTCAAACTTaGGCACAACTTCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PISGLHPIVPTGGFKSYRGPFQT*AQLHPR Trigger: CCTTGGATGAAGTTGTGCTCAAGTTTGAAATGGGCC...CCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGAGTCCTCAGGGTTGCTaGACACCTCCCAGAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELQEFRNQRLDWVPWPQGSPQGC*TPPRDH Trigger: ATGATCTCTGGGAGGTGTTCAGCAACCCTGAGGACT...CCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTCCTCCACCTGCTGCTaGTGGTCCTCCATCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LVASRATGVQESEVGLGSSSTCC*WSSIHT Trigger: AGTGTGGATGGAGGACCAGCAGCAGCAGGTGGAGGA...GGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | CCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGACCTGGCTCTTGGCCTaGTGGAACTTCTTTAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISGLHPIVPTGGFKSYRTWLLA*WNFFKS Trigger: ACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCAGGT...CCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | TGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACTGGCTCTTGGCCTGCTaGAACTTCTTTAAGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPISGLHPIVPTGGFKSYWLLAC*NFFKSS Trigger: GGAACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCA...GTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | AATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTTGACACGACAGAAGCGGAGAAGACCACCTaGCTCTTGGCCTGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPFFREGKCGQQVLDTTEAEKTT*LLACWN Trigger: GTTCCAGCAGGCCAAGAGCCAGGTGGTCTTCTCCGC...TTCTGTCGTGTCAAGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPALKSLLQGGKVWPASTAPSRF*KIRQRW Trigger: CCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGC...AGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGATTGGGTTCCTTGGCCCCAAGGGCTGCTGGGCAGTGGTTGTCAACGATTTCGTGCTCTCACGTaGCCCATTTCAAACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLDWVPWPQGLLGSGCQRFRALT*PISNLS Trigger: GCTCAAGTTTGAAATGGGCCACGTGAGAGCACGAAA...TCGTTGACAACCACTGCCCAGCAGCCCTTGGGGCCAAGGAACCCAATCCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGGTGATCTGGTTCATATaGATGTCGATAGTGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRVIWFI*MSIVGT Trigger: CGTGCCCACTATCGACATCCATATGAACCAGATCAC...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | CAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGGGGCTAGCCCTTCCAGTAGATATGCTCCTCTaGGGAGAAGACCACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLVALILETESWGLALPVDMLL*GEDHLA Trigger: AGCCAGGTGGTCTTCTCCGCAGAGGAGCATATCTAC...TGGAAGGGCTAGCCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR GCA 90 bp | GAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGATCGAGGAATGTAGTTaGCCAGGTAGTTCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQEFRNQRLDWVPWPQGIEECS*PGSSAA Trigger: TGCAGCTGAACTACCTGGGCAACTACATTCCTCGAT...CCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGGGTTCAAGAAGATCTTaGTATAAAAGAGCTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PISGLHPIVPTGGFKSYRGSRRS*YKRAGR Trigger: GCGACCAGCTCTTTTATACCAAGATCTTCTTGAACC...CCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | TCTACTGACAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGCTGATCATTATGTAGGTGGGTaGTCTGGTAGTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STDSLSFQPWALTTLPADHYVGG*SGSYPG Trigger: CCCTGGATAACTACCAGACCACCCACCTACATAATG...ATCAGCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | GAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTTGGCCCCAAGGGACTGGATCTTGTAGTTaGAGAACTGAGCTGAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQEFRNQRLDWVPWPQGTGSCS*RTELNA Trigger: AGCGTTCAGCTCAGTTCTTCAACTACAAGATCCAGT...CCCTTGGGGCCAAGGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR TCA 90 bp | TCTACTGACAGTCTGTCCTTCCAGCCATGGGCTCTCACAACGCTCCCTGCTGATCATCAGCATCCACACTaGAGTAGTAGGTGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STDSLSFQPWALTTLPADHQHPH*SSRCKF Trigger: AAACTTGCACCTACTACTTCAGTGTGGATGCTGATG...ATCAGCAGGGAGCGTTGTGAGAGCCCATGGCTGGAAGGACAGACTGTCAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CCA 90 bp | CAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGGGGCTAGCCCTTCCACGCTCGAAGGTGATCTaGTTCATATGGATGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: QTLVALILETESWGLALPRSKVI*FIWMSI Trigger: TATCGACATCCATATGAACCAGATCACCTTCGAGCG...TGGAAGGGCTAGCCCCCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR GCA 90 bp | AAAATCAGTCCATGGGTCTTAAACGCAAGTCTTCAAGGCTTGGTAACTGAGCCGCAGGTCTTCCTTGTCTaGGTGCTTTTCCAGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KISPWVLNASLQGLVTEPQVFLV*VLFQCL Trigger: AAGGCACTGGAAAAGCACGCAGACAAGGAAGACCTG...CGGCTCAGTTACCAAGCCTTGAAGACTTGCGTTTAAGACCCATGGACTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR GCA 90 bp | TATTTATTTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAAAGCCCAGGAACCGCTTaGCGTCGGGGACTGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSVYGYRCGGKRTPCQSPGTA*RRGLWD Trigger: ATCCCACAGTCCCCGACGGCAAGCGGTTCCTGGGCT...TTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAAATAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CCA 90 bp | AAAATCAGTCCATGGGTCTTAAACGCAAGTCTTCAAGGCTTGGTAACTGAGCCGAGACCACCTGGCTCTTaGCCTGCTGGAACTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KISPWVLNASLQGLVTEPRPPGS*PAGTSL Trigger: TAAAGAAGTTCCAGCAGGCCAAGAGCCAGGTGGTCT...CGGCTCAGTTACCAAGCCTTGAAGACTTGCGTTTAAGACCCATGGACTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CCA 90 bp | AGTCCATGGGTCTTAAACGCAAGTCTTCAAGGCTTGGTAACTGAGCCGCCTTCCGGTTCAAGAAGATCTTaGTATAAAAGAGCTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPWVLNASLQGLVTEPPSGSRRS*YKRAGR Trigger: GCGACCAGCTCTTTTATACCAAGATCTTCTTGAACC...GGAAGGCGGCTCAGTTACCAAGCCTTGAAGACTTGCGTTTAAGACCCATGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAAAATCAGTCTCCCCCAGGCCCAGTaGCTGGATCTTGTAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSMDIDVGVREHLAKISLPQAQ*LDLVVE Trigger: TTCAACTACAAGATCCAGTCACTGGGCCTGGGGGAG...ACTGATTTTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR TCA 90 bp | TATTTATTTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAACTTTTGTGGCCACAGTaGGGACCAGAAGGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSVYGYRCGGKRTPCQLLWPQ*GPEGCP Trigger: AGGACAACCTTCTGGTCCTCACTGTGGCCACAAAAG...TTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAAATAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR GCA 90 bp | TATTTATTTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAAGTAGATATGCTCCTCTaGGGAGAAGACCACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSVYGYRCGGKRTPCQVDMLL*GEDHLA Trigger: AGCCAGGTGGTCTTCTCCGCAGAGGAGCATATCTAC...TTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAAATAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS CCA 90 bp | CTCCAGAGCCCAGGAACCGCTTGCCGTCGGGGACTGTGGGATACTTaGCCTCCAGCCTCCGGTCCGGGTAGATATGCTCCTCTGCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQSPGTACRRGLWDT*PPASGPGRYAPLRR Trigger: TCTCCGCAGAGGAGCATATCTACCCGGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCCCCGACGGCAAGCGGTTCCTGGGCTCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS GCA 90 bp | GACGGCACAGGTCTGCGCCCATGTTCCTGGCGTCGGCGTTGGCCATaGGCACCTCAGGACCCACTAGCTTCACAGACTGGTACTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DGTGLRPCSWRRRWP*APQDPLASQTGTHC Trigger: GCAGTGAGTACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCCGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 90 bp | GGTCCTGACGGCACAGGTCTGCGCCCATGTTCCTGGCGTCGGCGTTaGCCATGCGCACCTCAGGACCCACTAGCTTCACAGACTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GPDGTGLRPCSWRRR*PCAPQDPLASQTGT Trigger: AGTACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCCGTCAGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | ACTCTCCAGCATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGATTCCTGGCGTCGGCGTaGGCCATGCGCACCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLQHPRQLRRSLAPGKVRFLASA*AMRTSG Trigger: TCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAA...TCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATGCTGGAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 90 bp | AGGTGCAAGTTTGGTCCTGACGGCACAGGTCTGCGCCCATGTTCCTaGCGTCGGCGTTGGCCATGCGCACCTCAGGACCCACTAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCKFGPDGTGLRPCS*RRRWPCAPQDPLAS Trigger: TGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCCGTCAGGACCAAACTTGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 90 bp | CTGCAGTTCAGCCCGCAGGGCACTGCCCTTGATCAGGTAGATGTTTaGGATGTAAGGCACGTTCCAGACGCCAACACGACGGCCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQFSPQGTALDQVDV*DVRHVPDANTTALH Trigger: GTGCAGGGCCGTCGTGTTGGCGTCTGGAACGTGCCTTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCTGAACTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 90 bp | CCATGCGCACCTCAGGACCCACTAGCTTCACAGACTGGTACTCACTaGCGTGCTCCGCCAGGAACTGCTCTACCTGAAGTTTGTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCAPQDPLASQTGTH*RAPPGTALPEVCGA Trigger: GGCACCACAAACTTCAGGTAGAGCAGTTCCTGGCGGAGCACGGCAGTGAGTACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 90 bp | GGTCCGGGTAGATATGCTCCTCTGCGGAGAAGACCACCTGGCTCTTaGCCTGCTGGAACTTCTTTAAGAGTTCCCGGGGTCCCGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPGRYAPLRRRPPGS*PAGTSLRVPGVPRQ Trigger: TTGCCTCGGGACCCCGGGAACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCAGGTGGTCTTCTCCGCAGAGGAGCATATCTACCCGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCGGGACAGGGTGACCCAGTACAGTGTGGACATATGCCCCTCCCCCAAGTTCCAGTCCTCAGGGTaGCTGAACACCTCCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHRDRVTQYSVDICPSPKFQSSG*LNTSQR Trigger: TCTCTGGGAGGTGTTCAGCAACCCTGAGGACTGGAA...CTTGGGGGAGGGGCATATGTCCACACTGTACTGGGTCACCCTGTCCCGATGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 90 bp | CCAGGGAAAGCAGGTGGCCAAAGGTGTGCCGGTTGGTCAGGAACATaGACACCTCCTGCTGTCGGACATTGGCGCAGAAACTCATGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGKAGGQRCAGWSGT*TPPAVGHWRRNSCR Trigger: CCGACATGAGTTTCTGCGCCAATGTCCGACAGCAGGAGGTGTTCATGTTCCTGACCAACCGGCACACCTTTGGCCACCTGCTTTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CCA 90 bp | GTAGTTCAGCTGCAGCTTGGTGGGCCCATTGCCATGAACGACCACTaGGAGGGTGTCATAGGCCAGATTTCGTGCTCTCACGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VVQLQLGGPIAMNDH*EGVIGQISCSHVAH Trigger: ATGGGCCACGTGAGAGCACGAAATCTGGCCTATGACACCCTCCCAGTGGTCGTTCATGGCAATGGGCCCACCAAGCTGCAGCTGAACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGGTGAGGACCAGAAGGTaGTCCTCTAGCTTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRVRTRR*SSSLAS Trigger: TGACGCCAAGCTAGAGGACAACCTTCTGGTCCTCAC...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | GTAGGTGGGTTGACCCAGACCTTGGTGGCACTGATACTTGAAACAGAATCCTGGGGGACTGTGGGATACTaGGCCTCCAGCCTCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGGLTQTLVALILETESWGTVGY*ASSLRS Trigger: GGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCCC...CCAGGATTCTGTTTCAAGTATCAGTGCCACCAAGGTCTGGGTCAACCCACCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | CATCCCAGGCAGCTCCGTCGAAGTCTGGCCCCAGGGAAAGTCAGAGGAAAAAGGGTAGTAGGTGCAAGTTaGGTCCTGACGGCACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPRQLRRSLAPGKVRGKRVVGAS*VLTAQV Trigger: GACCTGTGCCGTCAGGACCAAACTTGCACCTACTAC...CCTTTTTCCTCTGACTTTCCCTGGGGCCAGACTTCGACGGAGCTGCCTGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | CCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGCCAAAGGTGTGCCGGTaGGTCAGGAACATGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: PISGLHPIVPTGGFKSYRPKVCR*VRNMNT Trigger: GGTGTTCATGTTCCTGACCAACCGGCACACCTTTGG...CCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 90 bp | ACACGGTGCAGCCCGTCTCGAAGGTCCAGAATCGAGGAATGTAGTTaGCCAGGTAGTTCAGCTGCAGCTTGGTGGGCCCATTGCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TRCSPSRRSRIEECS*PGSSAAAWWAHCHE Trigger: TTCATGGCAATGGGCCCACCAAGCTGCAGCTGAACTACCTGGGCAACTACATTCCTCGATTCTGGACCTTCGAGACGGGCTGCACCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 90 bp | CCACCGGCCAAGGCTCCATCCAGGTTCTGGAAGATTCGGCAGCGATaGTCCAGGCTGATATTGATTTGCTCCCTCTTCTCCGGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPAKAPSRFWKIRQR*SRLILICSLFSGFK Trigger: CTTGAACCCGGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGCCGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CAA 90 bp | ATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACAGGAGTTACTCCACCAGGAACTaGTGCCACTCCCGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISGLHPIVPTGGFKSYRSYSTRN*CHSRSK Trigger: CTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTA...ACTCCTGTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 90 bp | AGGCGCAGCAGCCGCAGGAAAAACAAGGATAGAAATGGTGTGGGCTaGTCAATGAACACACCGACCAGGACAGTGGGGAGAGCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RRSSRRKNKDRNGVG*SMNTPTRTVGRASS Trigger: GGATGAAGCTCTCCCCACTGTCCTGGTCGGTGTGTTCATTGAGCAGCCCACACCATTTCTATCCTTGTTTTTCCTGCGGCTGCTGCGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 90 bp | AGGTGGCCAAAGGTGTGCCGGTTGGTCAGGAACATGAACACCTCCTaGTGTCGGACATTGGCGCAGAAACTCATGTCGGAATCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWPKVCRLVRNMNTS*CRTLAQKLMSESSL Trigger: CAAGCTGGATTCCGACATGAGTTTCTGCGCCAATGTCCGACAGCAGGAGGTGTTCATGTTCCTGACCAACCGGCACACCTTTGGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CCA 90 bp | AGACCCGTAGCAAAGTCACCACCGGCCAAGGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGGTCCAGGCTGATATTGATTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPVAKSPPAKAPSRF*KIRQRWSRLILICS Trigger: GGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGCCGGTGGTGACTTTGCTACGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCGCCTTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCATAACCAGGTCTTCCTaGTCTGCGTGCTTTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRLPSPEIPSSGRESVAITRSS*SACFSS Trigger: ACTGGAAAAGCACGCAGACAAGGAAGACCTGGTTAT...GGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAAGGCGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGCCCTGAAATCCCTTCTTCAGGGAGGGAAAGTGTGGCCAGCAAGTACTGTGAGGACCAGAAGGTaGTCCTCTAGCTTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPALKSLLQGGKVWPASTVRTRR*SSSLAS Trigger: TGACGCCAAGCTAGAGGACAACCTTCTGGTCCTCAC...AGTACTTGCTGGCCACACTTTCCCTCCCTGAAGAAGGGATTTCAGGGCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCATCTCTGGCCTGCACCCCATCGTTCCAACTGGTGGCTTCAAGAGCTACATAACCAGGTCTTCCTaGTCTGCGTGCTTTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPISGLHPIVPTGGFKSYITRSS*SACFSS Trigger: ACTGGAAAAGCACGCAGACAAGGAAGACCTGGTTAT...GTAGCTCTTGAAGCCACCAGTTGGAACGATGGGGTGCAGGCCAGAGATGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 90 bp | GGAAAAGGTCTACGTTCTGCAGTTCAGCCCGCAGGGCACTGCCCTTaGTCAGGTAGATGTTTGAGATGTAAGGCACGTTCCAGACGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKGLRSAVQPAGHCP*SGRCLRCKARSRRQ Trigger: TTGGCGTCTGGAACGTGCCTTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCTGAACTGCAGAACGTAGACCTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 90 bp | TACAGCTTCTCTGTCATGGGGGCGATGTACTCCACCAGGAACTTGTaGCACTCCCGCTCGAAGGTGATCTGGTTCATATGGATGTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: YSFSVMGAMYSTRNL*HSRSKVIWFIWMSI Trigger: TATCGACATCCATATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTACATCGCCCCCATGACAGAGAAGCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CCA 90 bp | ACTTCATCCAAGGCTCCATCCAGGTTCTGGAAGATTCGGCAGCGATaGTCCAGGCTGATATTGATTTGCTCCCTCTTCTCCGGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSKAPSRFWKIRQR*SRLILICSLFSGFK Trigger: CTTGAACCCGGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGATGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS-3UTR CAA 90 bp | CTGGTGGCTTCAAGAGCTACAGGAGTTCAGGAATCAGAGGTTGGATTGGGTTCCTGGTCCAGGCTGATATaGATTTGCTCCCTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVASRATGVQESEVGLGSWSRLI*ICSLFS Trigger: GGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCA...GGAACCCAATCCAACCTCTGATTCCTGAACTCCTGTAGCTCTTGAAGCCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 90 bp | ATTGCCATGAACGACCACTGGGAGGGTGTCATAGGCCAGATTTCGTaGTCTCACGTGGCCCATTTCAAACTTGAGCACAACTTCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IAMNDHWEGVIGQIS*SHVAHFKLEHNFIQ Trigger: TTGGATGAAGTTGTGCTCAAGTTTGAAATGGGCCACGTGAGAGCACGAAATCTGGCCTATGACACCCTCCCAGTGGTCGTTCATGGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 90 bp | ATTTCAAACTTGAGCACAACTTCATCCAAGGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGGTCCAGGCTGATATTGATTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISNLSTTSSKAPSRF*KIRQRWSRLILICS Trigger: GGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGATGAAGTTGTGCTCAAGTTTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
||
| CDS-3UTR CAA 90 bp | TATTTATTTAGTGTCTATGGATATAGATGTGGGGGTAAGAGAACACCTTGCCAATGGTCCAGGCTGATATaGATTTGCTCCCTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLFSVYGYRCGGKRTPCQWSRLI*ICSLFS Trigger: GGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCA...TTGGCAAGGTGTTCTCTTACCCCCACATCTATATCCATAGACACTAAATAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
||
| CDS CCA 72 bp | CTCCAGAGCCCAGGAACCGCTTGCCGTCGGGGACTGTaGGATACTTGGCCTCCAGCCTCCGGTCCGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LQSPGTACRRGL*DTWPPASGPGR Trigger: TCTACCCGGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCCCCGACGGCAAGCGGTTCCTGGGCTCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
||
| CDS CCA 72 bp | GGCACAGGTCTGCGCCCATGTTCCTGGCGTCGGCGTTaGCCATGCGCACCTCAGGACCCACTAGCTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGLRPCSWRRR*PCAPQDPLASQ Trigger: CTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | TTTGGTCCTGACGGCACAGGTCTGCGCCCATGTTCCTaGCGTCGGCGTTGGCCATGCGCACCTCAGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: FGPDGTGLRPCS*RRRWPCAPQDP Trigger: TGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCCGTCAGGACCAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CAA 72 bp | CGGCACAGGTCTGCGCCCATGTTCCTGGCGTCGGCGTaGGCCATGCGCACCTCAGGACCCACTAGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RHRSAPMFLASA*AMRTSGPTSFT Trigger: TGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCTGTGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 72 bp | CCAGGACAGTGGGGAGAGCTTCATCCCCAATGCCCTTaGGGCTCCGTAGGCCCTCGTCACACACGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PGQWGELHPQCP*GSVGPRHTRCS Trigger: GCTGCACCGTGTGTGACGAGGGCCTACGGAGCCTCAAGGGCATTGGGGATGAAGCTCTCCCCACTGTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 72 bp | GGTCTGCGCCCATGTTCCTGGCGTCGGCGTTGGCCATaGGCACCTCAGGACCCACTAGCTTCACAGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: GLRPCSWRRRWP*APQDPLASQTG Trigger: ACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | AGAAGGTTGTCCTCTAGCTTGGCGTCATCCTTCGCCTaGACCAGAAGAAGCCAGGCCAACGGGGCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RRLSSSLASSFA*TRRSQANGARS Trigger: GCTCCTGGCCCCGTTGGCCTGGCTTCTTCTGGTCCAGGCGAAGGATGACGCCAAGCTAGAGGACAACCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS CCA 72 bp | GCCATGCGCACCTCAGGACCCACTAGCTTCACAGACTaGTACTCACTGCCGTGCTCCGCCAGGAACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AMRTSGPTSFTD*YSLPCSARNCS Trigger: AGAGCAGTTCCTGGCGGAGCACGGCAGTGAGTACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 72 bp | TGCCCAGGTAGTTCAGCTGCAGCTTGGTGGGCCCATTaGCATGAACGACCACTGGGAGGGTGTCATAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CPGSSAAAWWAH*HERPLGGCHRP Trigger: TGGCCTATGACACCCTCCCAGTGGTCGTTCATGGCAATGGGCCCACCAAGCTGCAGCTGAACTACCTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | TCCTCTGCGGAGAAGACCACCTGGCTCTTGGCCTGCTaGAACTTCTTTAAGAGTTCCCGGGGTCCCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSAEKTTWLLAC*NFFKSSRGPEA Trigger: TGCCTCGGGACCCCGGGAACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCAGGTGGTCTTCTCCGCAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS CCA 72 bp | CTGCAGCTTGGTGGGCCCATTGCCATGAACGACCACTaGGAGGGTGTCATAGGCCAGATTTCGTGCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LQLGGPIAMNDH*EGVIGQISCSH Trigger: GTGAGAGCACGAAATCTGGCCTATGACACCCTCCCAGTGGTCGTTCATGGCAATGGGCCCACCAAGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CAA 72 bp | GTGGCCACAGTGAGGACCAGAAGGTTGTCCTCTAGCTaGGCGTCATCCTTCGCCTGGACCAGAAGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VATVRTRRLSSS*ASSFAWTRRSQ Trigger: CTGGCTTCTTCTGGTCCAGGCGAAGGATGACGCCAAGCTAGAGGACAACCTTCTGGTCCTCACTGTGGCCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS TCA 72 bp | AGCCCGCAGGGCACTGCCCTTGATCAGGTAGATGTTTaGGATGTAAGGCACGTTCCAGACGCCAACACGACG | + |
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Preference number: 6 (lower is better) Translates to: SPQGTALDQVDV*DVRHVPDANTT Trigger: CGTCGTGTTGGCGTCTGGAACGTGCCTTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 72 bp | AGCCCGTCTCGAAGGTCCAGAATCGAGGAATGTAGTTaGCCAGGTAGTTCAGCTGCAGCTTGGTGGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPSRRSRIEECS*PGSSAAAWWAH Trigger: ATGGGCCCACCAAGCTGCAGCTGAACTACCTGGGCAACTACATTCCTCGATTCTGGACCTTCGAGACGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 72 bp | CCTCAGGACCCACTAGCTTCACAGACTGGTACTCACTaGCGTGCTCCGCCAGGAACTGCTCTACCTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PQDPLASQTGTH*RAPPGTALPEV Trigger: AACTTCAGGTAGAGCAGTTCCTGGCGGAGCACGGCAGTGAGTACCAGTCTGTGAAGCTAGTGGGTCCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | GCAAAGTCACCACCGGCCAAGGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGGTCCAGGCTGATATTG | + |
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Preference number: 6 (lower is better) Translates to: AKSPPAKAPSRF*KIRQRWSRLIL Trigger: CAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGCCGGTGGTGACTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105712.2 |
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| CDS CAA 90 bp | GGGTACAGCTTCTCTGTCATGGGGGCGATGTACTCCACCAGGAACTaGTGCCACTCCCGCTCGAAGGTGATCTGGTTCATATGGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: GYSFSVMGAMYSTRN*CHSRSKVIWFIWMS Trigger: CGACATCCATATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTACATCGCCCCCATGACAGAGAAGCTGTACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 72 bp | TCTGTCATGGGGGCGATGTACTCCACCAGGAACTTGTaGCACTCCCGCTCGAAGGTGATCTGGTTCATATGG | + |
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Preference number: 6 (lower is better) Translates to: SVMGAMYSTRNL*HSRSKVIWFIW Trigger: CCATATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTACATCGCCCCCATGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CCA 72 bp | AGATATGCTCCTCTGCGGAGAAGACCACCTGGCTCTTaGCCTGCTGGAACTTCTTTAAGAGTTCCCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RYAPLRRRPPGS*PAGTSLRVPGV Trigger: GACCCCGGGAACTCTTAAAGAAGTTCCAGCAGGCCAAGAGCCAGGTGGTCTTCTCCGCAGAGGAGCATATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS CCA 72 bp | TTCAGGGCTATGTTGACGGTGAAGGTAGAGGCGTCATaGTGGGGCATCAAGGAAGGCTGCTCATCGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: FRAMLTVKVEAS*WGIKEGCSSGL Trigger: TAAGCCCGATGAGCAGCCTTCCTTGATGCCCCACCATGACGCCTCTACCTTCACCGTCAACATAGCCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CAA 72 bp | TCAGTCTCTTTTGTGGCCACAGTGAGGACCAGAAGGTaGTCCTCTAGCTTGGCGTCATCCTTCGCCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: SVSFVATVRTRR*SSSLASSFAWT Trigger: GGTCCAGGCGAAGGATGACGCCAAGCTAGAGGACAACCTTCTGGTCCTCACTGTGGCCACAAAAGAGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS CAA 72 bp | TTATCCAGGGAAAGCAGGTGGCCAAAGGTGTGCCGGTaGGTCAGGAACATGAACACCTCCTGCTGTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: LSRESRWPKVCR*VRNMNTSCCRT Trigger: TGTCCGACAGCAGGAGGTGTTCATGTTCCTGACCAACCGGCACACCTTTGGCCACCTGCTTTCCCTGGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS TCA 72 bp | CTACGTTCTGCAGTTCAGCCCGCAGGGCACTGCCCTTaGTCAGGTAGATGTTTGAGATGTAAGGCACGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRSAVQPAGHCP*SGRCLRCKARS Trigger: GGAACGTGCCTTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCTGAACTGCAGAACGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 72 bp | AAGGTGTGCCGGTTGGTCAGGAACATGAACACCTCCTaGTGTCGGACATTGGCGCAGAAACTCATGTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: KVCRLVRNMNTS*CRTLAQKLMSE Trigger: TTCCGACATGAGTTTCTGCGCCAATGTCCGACAGCAGGAGGTGTTCATGTTCCTGACCAACCGGCACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CAA 72 bp | TTCTCTGTCATGGGGGCGATGTACTCCACCAGGAACTaGTGCCACTCCCGCTCGAAGGTGATCTGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: FSVMGAMYSTRN*CHSRSKVIWFI Trigger: TATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTACATCGCCCCCATGACAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS GCA 72 bp | AACGACCACTGGGAGGGTGTCATAGGCCAGATTTCGTaGTCTCACGTGGCCCATTTCAAACTTGAGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: NDHWEGVIGQIS*SHVAHFKLEHN Trigger: GTTGTGCTCAAGTTTGAAATGGGCCACGTGAGAGCACGAAATCTGGCCTATGACACCCTCCCAGTGGTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS GCA 72 bp | AGCCGCAGGAAAAACAAGGATAGAAATGGTGTGGGCTaGTCAATGAACACACCGACCAGGACAGTGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SRRKNKDRNGVG*SMNTPTRTVGR Trigger: TCTCCCCACTGTCCTGGTCGGTGTGTTCATTGAGCAGCCCACACCATTTCTATCCTTGTTTTTCCTGCGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | AAGGCTCCATCCAGGTTCTGGAAGATTCGGCAGCGATaGTCCAGGCTGATATTGATTTGCTCCCTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KAPSRFWKIRQR*SRLILICSLFS Trigger: GGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS CCA 72 bp | GAAGTTGGACCAGAGCCTCCCGTGGCGGGTCATGAGTaGCGCAATGACATTCTTGTTTTGTTCAATCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: EVGPEPPVAGHE*RNDILVLFNQE Trigger: CTCCTGATTGAACAAAACAAGAATGTCATTGCGCCACTCATGACCCGCCACGGGAGGCTCTGGTCCAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CCA 72 bp | ACCAGGAACTTGTGCCACTCCCGCTCGAAGGTGATCTaGTTCATATGGATGTCGATAGTGGGCACGTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: TRNLCHSRSKVI*FIWMSIVGTFS Trigger: CGAAAACGTGCCCACTATCGACATCCATATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGTTCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000149129.3 |
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| CDS CCA 72 bp | TTGAGCACAACTTCATCCAAGGCTCCATCCAGGTTCTaGAAGATTCGGCAGCGATGGTCCAGGCTGATATTG | + |
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Preference number: 6 (lower is better) Translates to: LSTTSSKAPSRF*KIRQRWSRLIL Trigger: CAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGATGAAGTTGTGCTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 72 bp | CCAGATTTCGTGCTCTCACGTGGCCCATTTCAAACTTaGGCACAACTTCATCCAAGGCTCCATCCAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PDFVLSRGPFQT*AQLHPRLHPGS Trigger: AGAACCTGGATGGAGCCTTGGATGAAGTTGTGCTCAAGTTTGAAATGGGCCACGTGAGAGCACGAAATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS TCA 72 bp | GGAAAAACAAGGATAGAAATGGTGTGGGCTGCTCAATaGACACACCGACCAGGACAGTGGGGAGAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GKTRIEMVWAAQ*THRPGQWGELH Trigger: ATGAAGCTCTCCCCACTGTCCTGGTCGGTGTGTTCATTGAGCAGCCCACACCATTTCTATCCTTGTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019199.14 |
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| CDS CAA 72 bp | GAAGATTCGGCAGCGATGGTCCAGGCTGATATTGATTaGCTCCCTCTTCTCCGGGTTCAAGAAGATCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: EDSAAMVQADID*LPLLRVQEDLG Trigger: ACCAAGATCTTCTTGAACCCGGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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| CDS GCA 72 bp | AAGATTCGGCAGCGATGGTCCAGGCTGATATTGATTTaGTCCCTCTTCTCCGGGTTCAAGAAGATCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: KIRQRWSRLILI*SLFSGFKKILV Trigger: TACCAAGATCTTCTTGAACCCGGAGAAGAGGGAGCAAATCAATATCAGCCTGGACCATCGCTGCCGAATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019199.14 ENSMUST00000105712.2 |
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