RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLLP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031775

Ensembl transcript IDs: ENSMUST00000034227.6, ENSMUST00000213043.2

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAAGGGCAAGAAAGTTAAGAGTCTGGCCCGTGTGACCCATCACTaGGATGCTGCCTTCTATTCCCTGCCTGAGCAGCAGAACCCAGAA +
Preference number: 1 (lower is better)
Translates to: DKGKKVKSLARVTHH*DAAFYSLPEQQNPE
Trigger: TTCTGGGTTCTGCTGCTCAGGCAGGGAATAGAAGGCAGCATCTCAGTGATGGGTCACACGGGCCAGACTCTTAACTTTCTTGCCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR TCA 90 bp CCAATGGACAAGACAAGGGCAAGAAAGTTAAGAGTCTGGCCCGTGTaGCCCATCACTGAGATGCTGCCTTCTATTCCCTGCCTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PMDKTRARKLRVWPV*PITEMLPSIPCLSS
Trigger: GCTGCTCAGGCAGGGAATAGAAGGCAGCATCTCAGTGATGGGTCACACGGGCCAGACTCTTAACTTTCTTGCCCTTGTCTTGTCCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR GCA 90 bp TGTAAGCTTGCTAATTTTGTGTGTTGGTCCACAAACTTGGACAGATaGTATGTGCGTCCTCCAATGGACAAGACAAGGGCAAGAAAGTTA +
Preference number: 1 (lower is better)
Translates to: CKLANFVCWSTNLDR*YVRPPMDKTRARKL
Trigger: TAACTTTCTTGCCCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGGACCAACACACAAAATTAGCAAGCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR-3UTR CCA 90 bp GTCCACAAACTTGGACAGATGCTATGTGCGTCCTCCAATGGACAAGACAAGGGCCAGGGGAGGGGACGGTaGGACCAGAAGAGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: VHKLGQMLCASSNGQDKGQGRGR*DQKSPG
Trigger: CCCCGGGCTCTTCTGGTCCCACCGTCCCCTCCCCTG...GCCCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR-3UTR GCA 90 bp GGTCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTGGGCCAGTTCCATCTGTaGCAGTGTAGGCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GLLVHLVLVNRVAQPGLLGQFHL*QCRPVP
Trigger: AGGAACTGGCCTACACTGGCACAGATGGAACTGGCC...CAGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR-3UTR CCA 90 bp TCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTGAAGGATGTCCCCACCCCTaGCTCTTGGCCAGTTCCATC +
Preference number: 2 (lower is better)
Translates to: SVSAFSAGEQGGPAWATEGCPHP*LLASSI
Trigger: GATGGAACTGGCCAAGAGCCAGGGGTGGGGACATCC...TTCAGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR-3UTR TCA 90 bp GTCCACAAACTTGGACAGATGCTATGTGCGTCCTCCAATGGACAAGACAAGGGCCCCATCACCTTCTGCTaGATAAGGGAGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: VHKLGQMLCASSNGQDKGPITFC*IREVGR
Trigger: CCTCCCCACCTCCCTTATTCAGCAGAAGGTGATGGG...GCCCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR-3UTR CCA 90 bp AGCTTGCTAATTTTGTGTGTTGGTCCACAAACTTGGACAGATGCTATGTGCGTCGGTGACAGGTTGGCATaGGGCAGGGGAGGGGACGGT +
Preference number: 2 (lower is better)
Translates to: SLLILCVGPQTWTDAMCVGDRLA*GRGGDG
Trigger: ACCGTCCCCTCCCCTGCCCCATGCCAACCTGTCACC...GACGCACATAGCATCTGTCCAAGTTTGTGGACCAACACACAAAATTAGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR-3UTR CAA 90 bp GGGTCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTCCCCACCCCTGGCTCTaGGCCAGTTCCATCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GSVSAFSAGEQGGPAWATPHPWL*ASSICA
Trigger: GGCACAGATGGAACTGGCCAAGAGCCAGGGGTGGGG...AGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR GCA 72 bp ATGTCCCCACCCCTGGCTCTTGGCCAGTTCCATCTGTaGCAGTGTAGGCCAGTTCCTCAGGAGTGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: MSPPLALGQFHL*QCRPVPQECWR
Trigger: TCTCCAGCACTCCTGAGGAACTGGCCTACACTGGCACAGATGGAACTGGCCAAGAGCCAGGGGTGGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR GCA 72 bp ACCATTAACCCCATGACAGCTCACCAGGCAAGGCCCTaGTTCCTTCTGTCCCTCCTTGGAAGTCCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: TINPMTAHQARP*FLLSLLGSPLC
Trigger: GCACAGGGGACTTCCAAGGAGGGACAGAAGGAAGCAGGGCCTTGCCTGGTGAGCTGTCATGGGGTTAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR TCA 72 bp GACCCATCACTGAGATGCTGCCTTCTATTCCCTGCCTaGGCAGCAGAACCCAGAATGCCTCCCCTAAACCGG +
Preference number: 3 (lower is better)
Translates to: DPSLRCCLLFPA*AAEPRMPPLNR
Trigger: CCGGTTTAGGGGAGGCATTCTGGGTTCTGCTGCTCAGGCAGGGAATAGAAGGCAGCATCTCAGTGATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR-3UTR CAA 90 bp GGTCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTGGGAGTGCTGGAGAGTTaGAGTCCAGTAAGCTTAGGG +
Preference number: 3 (lower is better)
Translates to: GLLVHLVLVNRVAQPGLLGVLES*SPVSLG
Trigger: CCCTAAGCTTACTGGACTCAAACTCTCCAGCACTCC...CAGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR-3UTR CAA 90 bp GGGTCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTGGAGTGCTGGAGAGTTaGAGTCCAGTAAGCTTAGGG +
Preference number: 3 (lower is better)
Translates to: GSVSAFSAGEQGGPAWATGVLES*SPVSLG
Trigger: CCCTAAGCTTACTGGACTCAAACTCTCCAGCACTCC...AGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
3UTR TCA 72 bp GCATTACGTCAGGCCGTGAGATACCTGATGGGTCTCTaGGAGCTCTGGCTTCCTAGGATTCGCTTTCCTCTA +
Preference number: 3 (lower is better)
Translates to: ALRQAVRYLMGL*ELWLPRIRFPL
Trigger: TAGAGGAAAGCGAATCCTAGGAAGCCAGAGCTCTCAGAGACCCATCAGGTATCTCACGGCCTGACGTAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR TCA 72 bp AAGAAAGTTAAGAGTCTGGCCCGTGTGACCCATCACTaGGATGCTGCCTTCTATTCCCTGCCTGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: KKVKSLARVTHH*DAAFYSLPEQQ
Trigger: CTGCTGCTCAGGCAGGGAATAGAAGGCAGCATCTCAGTGATGGGTCACACGGGCCAGACTCTTAACTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR TCA 72 bp AAGACAAGGGCAAGAAAGTTAAGAGTCTGGCCCGTGTaGCCCATCACTGAGATGCTGCCTTCTATTCCCTGC +
Preference number: 3 (lower is better)
Translates to: KTRARKLRVWPV*PITEMLPSIPC
Trigger: GCAGGGAATAGAAGGCAGCATCTCAGTGATGGGTCACACGGGCCAGACTCTTAACTTTCTTGCCCTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR CCA 72 bp GGCTTCCTAGGATTCGCTTTCCTCTATGCCTCAAAATaGGCTAGTCCTCCTGGAACAGGGAGACTTCATTAC +
Preference number: 3 (lower is better)
Translates to: GFLGFAFLYASK*ASPPGTGRLHY
Trigger: GTAATGAAGTCTCCCTGTTCCAGGAGGACTAGCCCATTTTGAGGCATAGAGGAAAGCGAATCCTAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR GCA 72 bp TTGTGTGTTGGTCCACAAACTTGGACAGATGCTATGTaGGTCCTCCAATGGACAAGACAAGGGCAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: LCVGPQTWTDAM*VLQWTRQGQES
Trigger: ACTTTCTTGCCCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGGACCAACACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR GCA 72 bp GCTAATTTTGTGTGTTGGTCCACAAACTTGGACAGATaGTATGTGCGTCCTCCAATGGACAAGACAAGGGCA +
Preference number: 3 (lower is better)
Translates to: ANFVCWSTNLDR*YVRPPMDKTRA
Trigger: TGCCCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGGACCAACACACAAAATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
3UTR TCA 72 bp GGGACAAAGATAATCTGTCTTTTGTTAGGGTTATACTaGGGCAGGTCAGAGGCTGAGGGTCTGTTAGTGCAT +
Preference number: 3 (lower is better)
Translates to: GTKIICLLLGLY*GRSEAEGLLVH
Trigger: ATGCACTAACAGACCCTCAGCCTCTGACCTGCCTCAGTATAACCCTAACAAAAGACAGATTATCTTTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
CDS-3UTR GCA 90 bp CTGGCTCTTGGCCAGTTCCATCTGTGCCAGTGTAGGCCAGTTCCTCAGGAGTGCCGCCCTGCGCGGGGCTaGTGGTCCTCGTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LALGQFHLCQCRPVPQECRPARG*WSSCSL
Trigger: AAGTGAGCACGAGGACCAGCAGCCCCGCGCAGGGCG...GCACTCCTGAGGAACTGGCCTACACTGGCACAGATGGAACTGGCCAAGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
CDS-3UTR GCA 90 bp CCCCACCCCTGGCTCTTGGCCAGTTCCATCTGTGCCAGTGTAGGCCAGTTCCTCGGCGCTGTGCTGTGCTaGCAGCCTTGCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PHPWLLASSICASVGQFLGAVLC*QPCLRD
Trigger: GTCTCTGAGGCAAGGCTGGCAGCACAGCACAGCGCC...GAGGAACTGGCCTACACTGGCACAGATGGAACTGGCCAAGAGCCAGGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213043.2
CDS-3UTR GCA 90 bp GTAGGCCAGTTCCTCAGGAGTGCTGGAGAGTTTGAGTCCAGTAAGCTTAGGGGGGACTCGTGGCCGCGTTaGTACCCACTCCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VGQFLRSAGEFESSKLRGDSWPR*YPLLAR
Trigger: CCTGGCGAGGAGTGGGTAGCAACGCGGCCACGAGTC...CCCCCTAAGCTTACTGGACTCAAACTCTCCAGCACTCCTGAGGAACTGGCCTAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS-3UTR CCA 90 bp GTAGGCCAGTTCCTCAGGAGTGCTGGAGAGTTTGAGTCCAGTAAGCTTAGGGGGCCTGCGCGGGGCTGCTaGTCCTCGTGCTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: VGQFLRSAGEFESSKLRGPARGC*SSCSLS
Trigger: CGAAAGTGAGCACGAGGACCAGCAGCCCCGCGCAGG...CCCCCTAAGCTTACTGGACTCAAACTCTCCAGCACTCCTGAGGAACTGGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
CDS-3UTR GCA 90 bp ATCTGTGCCAGTGTAGGCCAGTTCCTCAGGAGTGCTGGAGAGTTTGAGTCCAGTGACTCGTGGCCGCGTTaGTACCCACTCCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICASVGQFLRSAGEFESSDSWPR*YPLLAR
Trigger: CCTGGCGAGGAGTGGGTAGCAACGCGGCCACGAGTC...ACTGGACTCAAACTCTCCAGCACTCCTGAGGAACTGGCCTACACTGGCACAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS-3UTR GCA 90 bp AACAGGGTGGCCCAGCCTGGGCTACTGAAGTTCTCTGATGACAAGGCAGAGCTCCTGTGCTGCCAGCCTTaGCTCAGAGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NRVAQPGLLKFSDDKAELLCCQP*LRDRGL
Trigger: GAGACCTCTGTCTCTGAGGCAAGGCTGGCAGCACAG...GAGCTCTGCCTTGTCATCAGAGAACTTCAGTAGCCCAGGCTGGGCCACCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213043.2
CDS-3UTR GCA 90 bp AGTGTAGGCCAGTTCCTCAGGAGTGCTGGAGAGTTTGAGTCCAGTAAGCTTAGGGGCTGCTGGTCCTCGTaGTCACTTTCGACGGGAACT +
Preference number: 4 (lower is better)
Translates to: SVGQFLRSAGEFESSKLRGCWSS*SLSTGT
Trigger: AGTTCCCGTCGAAAGTGAGCACGAGGACCAGCAGCC...CCTAAGCTTACTGGACTCAAACTCTCCAGCACTCCTGAGGAACTGGCCTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
CDS-3UTR TCA 90 bp TCTGTTAGTGCATTTAGTGCTGGTGAACAGGGTGGCCCAGCCTGGGCTACTGAAAAAGAAAGAGGCAGCTaGGCGCTGGTTATATGGCCG +
Preference number: 4 (lower is better)
Translates to: SVSAFSAGEQGGPAWATEKERGS*ALVIWP
Trigger: CGGCCATATAACCAGCGCTCAGCTGCCTCTTTCTTT...TTCAGTAGCCCAGGCTGGGCCACCCTGTTCACCAGCACTAAATGCACTAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS-3UTR TCA 90 bp TCTGATGACAAGGCAGAGCTCCCCAAACCCCATCACCTTCTGCTGAATAAGGGAAAAGAAAGAGGCAGCTaGGCGCTGGTTATATGGCCG +
Preference number: 4 (lower is better)
Translates to: SDDKAELPKPHHLLLNKGKERGS*ALVIWP
Trigger: CGGCCATATAACCAGCGCTCAGCTGCCTCTTTCTTT...TCCCTTATTCAGCAGAAGGTGATGGGGTTTGGGGAGCTCTGCCTTGTCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS GCA 90 bp GTTATATGGCCGGGAGCCCCTCAGGGATGTCAGATCGACCGCCGCTaGACAGGCGATAAAGGCAGTAATGTAGAGAACCGTGGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: VIWPGAPQGCQIDRR*TGDKGSNVENRGSD
Trigger: GTCGCTGCCACGGTTCTCTACATTACTGCCTTTATCGCCTGTGCAGCGGCGGTCGATCTGACATCCCTGAGGGGCTCCCGGCCATATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS-3UTR CAA 90 bp CCTGGGCTACTGAAGTTCTCTGATGACAAGGCAGAGCTCCCCAAACCCCATCACGCTGTGCTGCCAGCCTaGCCTCAGAGACAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PGLLKFSDDKAELPKPHHAVLPA*PQRQRS
Trigger: AGACCTCTGTCTCTGAGGCAAGGCTGGCAGCACAGC...GTGATGGGGTTTGGGGAGCTCTGCCTTGTCATCAGAGAACTTCAGTAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213043.2
CDS GCA 72 bp TCCGGTCGCAGCGCAGACACAGAGGCTCCCACGCCCTaGGCGGGGCTGCTGGTCCTCGTGCTCACTTTCGAC +
Preference number: 6 (lower is better)
Translates to: SGRSADTEAPTP*AGLLVLVLTFD
Trigger: GTCGAAAGTGAGCACGAGGACCAGCAGCCCCGCGCAGGGCGTGGGAGCCTCTGTGTCTGCGCTGCGACCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034227.6
CDS GCA 72 bp CCGGGAGCCCCTCAGGGATGTCAGATCGACCGCCGCTaGACAGGCGATAAAGGCAGTAATGTAGAGAACCGT +
Preference number: 6 (lower is better)
Translates to: PGAPQGCQIDRR*TGDKGSNVENR
Trigger: ACGGTTCTCTACATTACTGCCTTTATCGCCTGTGCAGCGGCGGTCGATCTGACATCCCTGAGGGGCTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS GCA 72 bp AAGATCAGTAACTCCTTCACTGGCGCTGTGCTGTGCTaGCAGCCTTGCCTCAGAGACAGAGGTCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: KISNSFTGAVLC*QPCLRDRGLQP
Trigger: AGGCTGGAGACCTCTGTCTCTGAGGCAAGGCTGGCAGCACAGCACAGCGCCAGTGAAGGAGTTACTGATCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213043.2
CDS CCA 72 bp ATCACCAGACAAGCAAAGAAAGAGGCAGCTGAGCGCTaGTTATATGGCCGGGAGCCCCTCAGGGATGTCAGA +
Preference number: 6 (lower is better)
Translates to: ITRQAKKEAAER*LYGREPLRDVR
Trigger: TCTGACATCCCTGAGGGGCTCCCGGCCATATAACCAGCGCTCAGCTGCCTCTTTCTTTGCTTGTCTGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034227.6
ENSMUST00000213043.2
CDS GCA 72 bp AAAAAGATCAGTAACTCCTTCACTGGCGCTGTGCTGTaGTGCCAGCCTTGCCTCAGAGACAGAGGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: KKISNSFTGAVL*CQPCLRDRGLQ
Trigger: CTGGAGACCTCTGTCTCTGAGGCAAGGCTGGCAGCACAGCACAGCGCCAGTGAAGGAGTTACTGATCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213043.2