Pregenerated sensors for PLK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035486Ensembl transcript IDs: ENSMUST00000039836.15, ENSMUST00000105351.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGTAAGTGGTCCAGGCTaGGCCGCTCGGCGGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSVSGPG*AARRGP Trigger: CGGACCCCGCCGAGCGGCCCAGCCTGGACCACTTAC...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAAGGTGGCCACAAGCTaGCGGCTCCGCCGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDKVATS*RLRRRR Trigger: CCGGCGGCGGCGGAGCCGCCAGCTTGTGGCCACCTT...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGGTCCCCCTGGCTCCTaGAGGGTGAGCAGGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSGPPGS*RVSRRS Trigger: GGACCTCCTGCTCACCCTCCAGGAGCCAGGGGGACC...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACCAGGAGCCGTGCAATaGGGCTGCGGGCGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTPGAVQ*GCGRWA Trigger: CGCCCAGCGCCCGCAGCCTCATTGCACGGCTCCTGG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGGCGGGGTCCCAAGGGTaGGGAGGTGGATTCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQAGSQG*GGGFGP Trigger: AGGGCCGAATCCACCTCCTCACCCTTGGGACCCCGC...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCCTGGCTCCTGGAGGGTaGGCAGGAGGTCCTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSLAPGG*AGGPRP Trigger: AGGACGAGGACCTCCTGCTCACCCTCCAGGAGCCAG...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGGGTCGCGCAGGAAGGTaGCCACAAGCTGGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQGRAGR*PQAGGS Trigger: GGAGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACC...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCGGTCGCGCAGGAAGGTaGCCACAAGCTGGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DRNRSQVPRSPRQHEEVCGRAGR*PQAGGS Trigger: GGAGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACC...GCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | AACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGACGCCACGATGTTGCGGTaGCGCAGGCGGCTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NRSQVPRSPRQHEEVCSDATMLR*RRRLCR Trigger: CCTGCACAGCCGCCTGCGCCACCGCAACATCGTGGC...GTCTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACCCGCAGAGCACCCTGTaGCAGCGACCAGCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDPQSTL*QRPAGP Trigger: GGGGCCTGCTGGTCGCTGCCACAGGGTGCTCTGCGG...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCCAAGGTGGCCGGCACTaGGTCAGCAGGAGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRNRSQVPRSPRQHEEVCQGGRH*VSRSWP Trigger: GGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTG...GCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCAGGCCGCTGCTCCCCTaGGGGGTCCTGTCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DRNRSQVPRSPRQHEEVCRPLLP*GVLSSH Trigger: ATGGCTGGACAGGACCCCCCAGGGGAGCAGCGGCCT...GCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACGCGGGGTCCCAAGGGTaGGGAGGTGGATTCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDAGSQG*GGGFGP Trigger: AGGGCCGAATCCACCTCCTCACCCTTGGGACCCCGC...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | GACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCGGAAGGCCACGATGTTaGGGTGGCGCAGGCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DRNRSQVPRSPRQHEEVCGRPRC*GGAGGC Trigger: ACAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCC...GCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAACCAGGAGCCGTGCAATaGGGCTGCGGGCGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PLCQPSMNTGCSALTQTEPGAVQ*GCGRWA Trigger: CGCCCAGCGCCCGCAGCCTCATTGCACGGCTCCTGG...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGCTCGGCGGGGTCCGGTaGCAGGAGCCGTGCAATGAG | + |
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Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEELGGVR*QEPCNE Trigger: CTCATTGCACGGCTCCTGGCACCGGACCCCGCCGAG...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCTGGGTCAGCAGGAGCTaGCCCACCTTCCGGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSWVSRS*PTFRNN Trigger: GTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCA...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAAGGCCGCTGCTCCCCTaGGGGGTCCTGTCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTRPLLP*GVLSSH Trigger: ATGGCTGGACAGGACCCCCCAGGGGAGCAGCGGCCT...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGGTCCCCCTGGCTCCTaGAGGGTGAGCAGGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTGPPGS*RVSRRS Trigger: GGACCTCCTGCTCACCCTCCAGGAGCCAGGGGGACC...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACTGGCTCCTGGAGGGTaGGCAGGAGGTCCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTLAPGG*AGGPRP Trigger: AGGACGAGGACCTCCTGCTCACCCTCCAGGAGCCAG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGGAAGGCCACGATGTTaGGGTGGCGCAGGCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTGRPRC*GGAGGC Trigger: ACAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCC...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | AACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGACCGGCAAAGGGTGGCGTaGCTGTCAGCACCGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: NRSQVPRSPRQHEEVCSDRQRVA*LSAPCT Trigger: TGTACACGGTGCTGACAGGCACGCCACCCTTTGCCG...GTCTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGAAAGGTGGCCACAAGCTaGCGGCTCCGCCGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRKVATS*RLRRRR Trigger: CCGGCGGCGGCGGAGCCGCCAGCTTGTGGCCACCTT...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAACCGCAGAGCACCCTGTaGCAGCGACCAGCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PLCQPSMNTGCSALTQTEPQSTL*QRPAGP Trigger: GGGGCCTGCTGGTCGCTGCCACAGGGTGCTCTGCGG...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCGCTGTGGCAGGAATGTaGAGGCAGCCGCTCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASAVAGM*RQPLRG Trigger: ACCCCGGAGCGGCTGCCTCCACATTCCTGCCACAGC...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCCAACCTGCCCAGAGGTaGGGGAAAGGCAAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSQPAQR*GKGKHR Trigger: CCTGTGTTTGCCTTTCCCCCACCTCTGGGCAGGTTG...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | AACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGACGGTAAAGGGACAAGGTaGCCGGCACTGGGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NRSQVPRSPRQHEEVCSDGKGTR*PALGQQ Trigger: CTGCTGACCCAGTGCCGGCCACCTTGTCCCTTTACC...GTCTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGGGTAAAGGGACAAGGTaGCCGGCACTGGGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQGKGTR*PALGQQ Trigger: CTGCTGACCCAGTGCCGGCCACCTTGTCCCTTTACC...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCTCAGCACCGTGTACATaGTGCATCCCAGAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSSAPCT*CIPEPR Trigger: TCTGGGCTCTGGGATGCATCATGTACACGGTGCTGA...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCTCCAGCCATAGGTCCTaGGTCCAAGCAGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSSSHRS*VQAEEQ Trigger: CTGTTCCTCTGCTTGGACGCAGGACCTATGGCTGGA...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGAGTAAGTGGTCCAGGCTaGGCCGCTCGGCGGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRVSGPG*AARRGP Trigger: CGGACCCCGCCGAGCGGCCCAGCCTGGACCACTTAC...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGTCATCTTGCAGTAAGTaGTCCAGGCTGGGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQSSCSK*SRLGRS Trigger: CGAGCGGCCCAGCCTGGACCACTTACTGCAAGATGA...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCCAGCTTGGCACGAAGTaGGCTGGGGACGTCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASQLGTK*AGDVPQ Trigger: CTGAGGGACGTCCCCAGCCCACTTCGTGCCAAGCTG...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACAGGAGAGGCAGGTGTaGCAGGCATGGGCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTQERQV*QAWAQS Trigger: GGACTGTGCCCATGCCTGCCACACCTGCCTCTCCTG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | TCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACAGCTTGTAGCAGCGGCTaGAGGCTCCCTTGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: SVAPLCQPSMNTGCSALTACSSG*RLPCRS Trigger: TGATCGGCAAGGGAGCCTTCAGCCGCTGCTACAAGC...TGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGCTTGTAGCAGCGGCTaGAGGCTCCCTTGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEEACSSG*RLPCRS Trigger: TGATCGGCAAGGGAGCCTTCAGCCGCTGCTACAAGC...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | CCCTACCCATCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCAGCACCATGTACACGTaGTCGCGGTCAGCAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PYPSVAPLCQPSMNTGCSSTMYT*SRSAKC Trigger: ACACTTTGCTGACCGCGATCACGTGTACATGGTGCT...GCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGATGGGTAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGTCCGGGGTGAAGCCCTaGCTGAAGAAGTCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQSGVKP*LKKSSC Trigger: GCAAGATGACTTCTTCAGTCAGGGCTTCACCCCGGA...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACCTTCCGGAACAACCTaGCCAGAGGTGGGGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTPSGTT*PEVGER Trigger: CCTTTCCCCCACCTCTGGGCAGGTTGTTCCGGAAGG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR GCA 90 bp | AACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGACCAGGTGATGGTGGACTaGAAGGGTGAAGCCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: NRSQVPRSPRQHEEVCSDQVMVD*KGEAMA Trigger: AGCCATGGCTTCACCCTTGCAGTCCACCATCACCTG...GTCTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | AGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGAACACAGGTGGGCTGTaGCAGGAATGTGGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQKQIPGSQVSTPARRGLNTGGL*QECGGS Trigger: GCTGCCTCCACATTCCTGCCACAGCCCACCTGTGTT...CAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACCAAGGTGGCCGGCACTaGGTCAGCAGGAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VVSTLHEHWLQRINTDRNQGGRH*VSRSWP Trigger: GGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTG...GTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAAGTAGCGCAGGCCGCTaGCCAGGCCCCGAAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: PLCQPSMNTGCSALTQTESSAGR*PGPEGN Trigger: ATTACCTTCGGGGCCTGGTCAGCGGCCTGCGCTACT...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR TCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCCGCACTTTCAGCACATaGGCCAAGGACTGGCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASRTFST*AKDWRL Trigger: TAGCCGCCAGTCCTTGGCTCATGTGCTGAAAGTGCG...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGGCGGTCAGCAAAGTGTaGGTGGAAGGCCACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQKQIPGSQVSTPARRGLAVSKV*VEGHDV Trigger: AACATCGTGGCCTTCCACGCACACTTTGCTGACCGC...CAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATCTCGGCGGGGTCCGGTaGCAGGAGCCGTGCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDLGGVR*QEPCNE Trigger: CTCATTGCACGGCTCCTGGCACCGGACCCCGCCGAG...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGGTTGCCACTTCCAGCTaGAGAGCCAAGCTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETDPRFPGLHASTKRSAQVATSS*RAKLPF Trigger: AAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAAC...CTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACAAACACAGGTGGGCTGTaGCAGGAATGTGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVAPLCQPSMNTGCSALTNTGGL*QECGGS Trigger: GCTGCCTCCACATTCCTGCCACAGCCCACCTGTGTT...TGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACAACCTGCCCAGAGGTaGGGGAAAGGCAAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTQPAQR*GKGKHR Trigger: CCTGTGTTTGCCTTTCCCCCACCTCTGGGCAGGTTG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACGGGCGCAGGGCCATGTaGGAGCCATCCCGAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVSTLHEHWLQRINTDRNGRRAM*EPSRNS Trigger: GCTGTTTCGGGATGGCTCCCACATGGCCCTGCGCCC...GTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGAGCCGAAGCCATACTTaGGGGAGTAATCCACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQKQIPGSQVSTPARRGLSRSHT*GSNPPT Trigger: AGTGGGTGGATTACTCCCTCAAGTATGGCTTCGGCT...CAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGCCGAAGCCATACTTaGGGGAGTAATCCACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDSRSHT*GSNPPT Trigger: AGTGGGTGGATTACTCCCTCAAGTATGGCTTCGGCT...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAGGACGTCCCTCAGGGTaGAGGTCCAGAGAGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLCQPSMNTGCSALTQTEGRPSG*RSRESL Trigger: AAGGGACTCTCTGGACCTTCACCCTGAGGGACGTCC...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACAGCGGTCAGCAAAGTGTaGGTGGAAGGCCACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVAPLCQPSMNTGCSALTAVSKV*VEGHDV Trigger: AACATCGTGGCCTTCCACGCACACTTTGCTGACCGC...TGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGGTCCCTGTGCACGATaGGTTGTTGGTGCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTGPCAR*VVGASS Trigger: GCTACTTGCACCAACAACGCATCGTGCACAGGGACC...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGGTTTCAGGTCCCTGTaGACGATGCGTTGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEEGFRSL*TMRCWC Trigger: GCACCAACAACGCATCGTGCACAGGGACCTGAAACC...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAACGGCAAAGGGTGGCGTaGCTGTCAGCACCGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PLCQPSMNTGCSALTQTERQRVA*LSAPCT Trigger: TGTACACGGTGCTGACAGGCACGCCACCCTTTGCCG...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCTCCAGCCATAGGTCCTaGGTCCAAGCAGAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASSSHRS*VQAEEQ Trigger: CTGTTCCTCTGCTTGGACGCAGGACCTATGGCTGGA...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGTCAGCAAAGTGTGCGTaGAAGGCCACGATGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEESAKCA*KATMLR Trigger: CCGCAACATCGTGGCCTTCCACGCACACTTTGCTGA...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCTCAGCAAAGTGTGCGTaGAAGGCCACGATGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASSAKCA*KATMLR Trigger: CCGCAACATCGTGGCCTTCCACGCACACTTTGCTGA...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCATTAACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCGACTGTAGAGGGACCTaGCGGCTACAATACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SALTQTETDPRFPGLHASDCRGT*RLQYSS Trigger: GCTGGAGTATTGTAGCCGCCAGGTCCCTCTACAGTC...GCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTTAATGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039836.15 |
||
| CDS-3UTR CCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATGCTGTGGCAGGAATGTaGAGGCAGCCGCTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDAVAGM*RQPLRG Trigger: ACCCCGGAGCGGCTGCCTCCACATTCCTGCCACAGC...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACCAGGAGAGGCAGGTGTaGCAGGCATGGGCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVSTLHEHWLQRINTDRNQERQV*QAWAQS Trigger: GGACTGTGCCCATGCCTGCCACACCTGCCTCTCCTG...GTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | AACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCTCAGACAGCATGACCATAGCCTaGGAGTCAGCAATGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRSQVPRSPRQHEEVCSDSMTIA*ESAMKL Trigger: GAGCTTCATTGCTGACTCCCAGGCTATGGTCATGCT...GTCTGAGCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGAGCACCATGTACACGTaGTCGCGGTCAGCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEESTMYT*SRSAKC Trigger: ACACTTTGCTGACCGCGATCACGTGTACATGGTGCT...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACGGACGTCCCTCAGGGTaGAGGTCCAGAGAGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVSTLHEHWLQRINTDRNGRPSG*RSRESL Trigger: AAGGGACTCTCTGGACCTTCACCCTGAGGGACGTCC...GTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACCTGGGAGTCAGCAATaGAGCTCAGCAGAGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVAPLCQPSMNTGCSALTPGSQQ*SSAERC Trigger: ACATCTCTCTGCTGAGCTTCATTGCTGACTCCCAGG...TGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACCTGGGAGTCAGCAATaGAGCTCAGCAGAGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTPGSQQ*SSAERC Trigger: ACATCTCTCTGCTGAGCTTCATTGCTGACTCCCAGG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTTGCCACTTCCAGCTaGAGAGCCAAGCTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEEVATSS*RAKLPF Trigger: AAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAAC...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACGAACAGTTTTCTGGTTaGCACTTCCAGCTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDEQFSG*HFQLQS Trigger: GCTCTGCAGCTGGAAGTGGCAACCAGAAAACTGTTC...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAAAAGGCAAACACAGGTaGGCTGTGGCAGGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTKGKHR*AVAGMW Trigger: CCACATTCCTGCCACAGCCCACCTGTGTTTGCCTTT...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATCAGCTTGGCACGAAGTaGGCTGGGGACGTCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDQLGTK*AGDVPQ Trigger: CTGAGGGACGTCCCCAGCCCACTTCGTGCCAAGCTG...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAACAGTTTTCTGGTTaGCACTTCCAGCTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTEQFSG*HFQLQS Trigger: GCTCTGCAGCTGGAAGTGGCAACCAGAAAACTGTTC...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATTGGGTCAGCAGGAGCTaGCCCACCTTCCGGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDWVSRS*PTFRNN Trigger: GTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCA...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAGGAACAGTTTTCTaGTTGCCACTTCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVVSTLHEHWLQRINTDRGTVF*LPLPAA Trigger: TGCAGCTGGAAGTGGCAACCAGAAAACTGTTCCTCT...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGAGCATGACCATAGCCTaGGAGTCAGCAATGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTDRNRSQVPRSPRQHEESMTIA*ESAMKL Trigger: GAGCTTCATTGCTGACTCCCAGGCTATGGTCATGCT...CTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATCAGCACCGTGTACATaGTGCATCCCAGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRSAPCT*CIPEPR Trigger: TCTGGGCTCTGGGATGCATCATGTACACGGTGCTGA...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACTCCGGGGTGAAGCCCTaGCTGAAGAAGTCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVSTLHEHWLQRINTDRNSGVKP*LKKSSC Trigger: GCAAGATGACTTCTTCAGTCAGGGCTTCACCCCGGA...GTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGAGGTTTCAGGTCCCTGTaGACGATGCGTTGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRGFRSL*TMRCWC Trigger: GCACCAACAACGCATCGTGCACAGGGACCTGAAACC...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACTGAAGAAGTCATCTTaGAGTAAGTGGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTLKKSS*SKWSRL Trigger: CAGCCTGGACCACTTACTGCAAGATGACTTCTTCAG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACACCGTCACGGATGTTTTaGTACATCTCTGACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTPSRMF*YISDKG Trigger: ACCCTTGTCAGAGATGTACCAAAACATCCGTGACGG...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATTCATCTTGCAGTAAGTaGTCCAGGCTGGGCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDSSCSK*SRLGRS Trigger: CGAGCGGCCCAGCCTGGACCACTTACTGCAAGATGA...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAAGAGGAACAGTTTTCTaGTTGCCACTTCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APLCQPSMNTGCSALTQTRGTVF*LPLPAA Trigger: TGCAGCTGGAAGTGGCAACCAGAAAACTGTTCCTCT...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATCAGGTGATGGTGGACTaGAAGGGTGAAGCCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQPSMNTGCSALTQTETDQVMVD*KGEAMA Trigger: AGCCATGGCTTCACCCTTGCAGTCCACCATCACCTG...ATCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGAAAAGGCAAACACAGGTaGGCTGTGGCAGGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRKGKHR*AVAGMW Trigger: CCACATTCCTGCCACAGCCCACCTGTGTTTGCCTTT...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGACTGAAGAAGTCATCTTaGAGTAAGTGGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRLKKSS*SKWSRL Trigger: CAGCCTGGACCACTTACTGCAAGATGACTTCTTCAG...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CCA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGACCGTCACGGATGTTTTaGTACATCTCTGACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTLHEHWLQRINTDRNRPSRMF*YISDKG Trigger: ACCCTTGTCAGAGATGTACCAAAACATCCGTGACGG...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | TCCCGCGCCGGTACACGCGCCCCGAGCCTGGGTCGCGCAGGAAGGTaGCCACAAGCTGGCGGCTCCGCCGCCGCCGGGACCGGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTRAPSLGRAGR*PQAGGSAAAGTGAP Trigger: TGGAGCCCCGGTCCCGGCGGCGGCGGAGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACCCAGGCTCGGGGCGCGTGTACCGGCGCGGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | TCCCTTGCCGATCAGCTTCCCGCGCCGGTACACGCGCCCCGAGCCTaGGTCGCGCAGGAAGGTGGCCACAAGCTGGCGGCTCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLADQLPAPVHAPRA*VAQEGGHKLAAPPP Trigger: CGGCGGCGGAGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACCCAGGCTCGGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 90 bp | GTGGTCCAGGCTGGGCCGCTCGGCGGGGTCCGGTGCCAGGAGCCGTaGAATGAGGCTGCGGGCGCTGGGCGACAGGTGAGTAGGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVQAGPLGGVRCQEP*NEAAGAGRQVSRLE Trigger: CTCGAGCCTACTCACCTGTCGCCCAGCGCCCGCAGCCTCATTGCACGGCTCCTGGCACCGGACCCCGCCGAGCGGCCCAGCCTGGACCAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 90 bp | GTGTGTAGGAGACGCCCACAGCGGGTCCCCCTGGCTCCTGGAGGGTaGGCAGGAGGTCCTCGTCCTCCCCACTTAGCACCAGCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCRRRPQRVPLAPGG*AGGPRPPHLAPAGF Trigger: AAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCTCCTGCTCACCCTCCAGGAGCCAGGGGGACCCGCTGTGGGCGTCTCCTACACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | CTTCCGGAACAACCTGCCCAGAGGTGGGGGAAAGGCAAACACAGGTaGGCTGTGGCAGGAATGTGGAGGCAGCCGCTCCGGGGTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPEQPAQRWGKGKHR*AVAGMWRQPLRGEA Trigger: GGCTTCACCCCGGAGCGGCTGCCTCCACATTCCTGCCACAGCCCACCTGTGTTTGCCTTTCCCCCACCTCTGGGCAGGTTGTTCCGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | GCACGAGTGTCCATTTCGGGACACCACTTCAGGTGCCTGGAAGTTTaGAGTCCCGCAGAGCACCCTGTGGCAGCGACCAGCAGGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARVSISGHHFRCLEV*SPAEHPVAATSRPH Trigger: GTGGGGCCTGCTGGTCGCTGCCACAGGGTGCTCTGCGGGACTCCAAACTTCCAGGCACCTGAAGTGGTGTCCCGAAATGGACACTCGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | GGGCCTGAGGCCTCTTTTGAGGTAAAGGGACAAGGTGGCCGGCACTaGGTCAGCAGGAGCTGGCCCACCTTCCGGAACAACCTGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPEASFEVKGQGGRH*VSRSWPTFRNNLPR Trigger: TCTGGGCAGGTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | GACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCCGGCTGAAGGCTCCCTaGCCGATCAGCTTCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DRNRSQVPRSPRQHEEVCRLKAP*PISFPR Trigger: GCGCGGGAAGCTGATCGGCAAGGGAGCCTTCAGCCG...GCAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | GTAATCCACCCACTTAGGAGCCCAGAGAACAGGCCGCTGCTCCCCTaGGGGGTCCTGTCCAGCCATAGGTCCTGCGTCCAAGCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VIHPLRSPENRPLLP*GVLSSHRSCVQAEE Trigger: TTCCTCTGCTTGGACGCAGGACCTATGGCTGGACAGGACCCCCCAGGGGAGCAGCGGCCTGTTCTCTGGGCTCCTAAGTGGGTGGATTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | AGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGCGGCTGAAGGCTCCCTaGCCGATCAGCTTCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RQKQIPGSQVSTPARRGLRLKAP*PISFPR Trigger: GCGCGGGAAGCTGATCGGCAAGGGAGCCTTCAGCCG...CAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | AGACAGAAACAGATCCCAGGTTCCCAGGTCTCCACGCCAGCACGAAGAGGTCTGTGGAAGGCCACGATGTaGCGGTGGCGCAGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQKQIPGSQVSTPARRGLWKATM*RWRRRL Trigger: CAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCCA...CAGACCTCTTCGTGCTGGCGTGGAGACCTGGGAACCTGGGATCTGTTTCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | CATATAGCAGGCAAAGAGCCGCAGGACAGCCAGCTTGGCACGAAGTaGGCTGGGGACGTCCCTCAGGGTGAAGGTCCAGAGAGTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIAGKEPQDSQLGTK*AGDVPQGEGPESPL Trigger: CAAGGGACTCTCTGGACCTTCACCCTGAGGGACGTCCCCAGCCCACTTCGTGCCAAGCTGGCTGTCCTGCGGCTCTTTGCCTGCTATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | GCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAGCCAAGCTCCCTTTaGGGCCCGCCAGGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APLCQPSMNTGCSALTQTEPSSL*GPPGQS Trigger: GGACTGGCCTGGCGGGCCCAAAAGGGAGCTTGGCTC...TGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 90 bp | AGTAGGCTCGAGGTAGTGGCCGTCACGGATGTTTTGGTACATCTCTaGCAAGGGTGCCGCGGCAAAGGGTGGCGTGCCTGTCAGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLEVVAVTDVLVHL*QGCRGKGWRACQHR Trigger: ACGGTGCTGACAGGCACGCCACCCTTTGCCGCGGCACCCTTGTCAGAGATGTACCAAAACATCCGTGACGGCCACTACCTCGAGCCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 90 bp | ACAATACTCCAGCACCATGTACACGTGATCGCGGTCAGCAAAGTGTaGGTGGAAGGCCACGATGTTGCGGTGGCGCAGGCGGCTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TILQHHVHVIAVSKV*VEGHDVAVAQAAVQ Trigger: CTGCACAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGATCACGTGTACATGGTGCTGGAGTATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 90 bp | TGGAGGGTGAGCAGGAGGTCCTCGTCCTCCCCACTTAGCACCAGCTaGGTTTGGGAGGTTTTGAGGCTGACCTGCACTGTCCCATTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WRVSRRSSSSPLSTS*VWEVLRLTCTVPLL Trigger: TAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCTCCTGCTCACCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 90 bp | TGTAGAGGGACCTGGCGGCTACAATACTCCAGCACCATGTACACGTaGTCGCGGTCAGCAAAGTGTGCGTGGAAGGCCACGATGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CRGTWRLQYSSTMYT*SRSAKCAWKATMLR Trigger: CCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGATCACGTGTACATGGTGCTGGAGTATTGTAGCCGCCAGGTCCCTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039836.15 |
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| CDS CCA 90 bp | GTGAGCAGGAGGTCCTCGTCCTCCCCACTTAGCACCAGCTGGGTTTaGGAGGTTTTGAGGCTGACCTGCACTGTCCCATTGCTAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSRRSSSSPLSTSWV*EVLRLTCTVPLLNS Trigger: GCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCTCCTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | GTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAACAGATGGAAGGCCACGATGTaGCGGTGGCGCAGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSTLHEHWLQRINTDRNRWKATM*RWRRRL Trigger: CAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCCA...TCTGTTTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | GGCCCCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACGGTCCAGAGAGTCCCTaGGTCAGGTTGGTAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPVVSTLHEHWLQRINTDGPESP*VRLVGD Trigger: GTCTCCTACCAACCTGACCAAGGGACTCTCTGGACC...GTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 90 bp | TCCCCACTTAGCACCAGCTGGGTTTGGGAGGTTTTGAGGCTGACCTaGACTGTCCCATTGCTAAACAGCATGACCATAGCCTGGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLSTSWVWEVLRLT*TVPLLNSMTIAWES Trigger: TGACTCCCAGGCTATGGTCATGCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS-3UTR CAA 90 bp | CCGTTGTGTCAACCCTCCATGAACACTGGCTGCAGCGCATTAACACAGACAGAAGGTCCAGAGAGTCCCTaGGTCAGGTTGGTAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLCQPSMNTGCSALTQTEGPESP*VRLVGD Trigger: GTCTCCTACCAACCTGACCAAGGGACTCTCTGGACC...TTCTGTCTGTGTTAATGCGCTGCAGCCAGTGTTCATGGAGGGTTGACACAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | GATCAGCTTCCCGCGCCGGTACACGCGCCCCGAGCCTaGGTCGCGCAGGAAGGTGGCCACAAGCTGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DQLPAPVHAPRA*VAQEGGHKLAA Trigger: AGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACCCAGGCTCGGGGCGCGTGTACCGGCGCGGGAAGCTGATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | TTGGGCCCGCCAGGCCAGTCCGCGGGGTCCCAAGGGTaGGGAGGTGGATTCGGCCCTCGGTGCAGAGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGPPGQSAGSQG*GGGFGPRCRED Trigger: ATCCTCTCTGCACCGAGGGCCGAATCCACCTCCTCACCCTTGGGACCCCGCGGACTGGCCTGGCGGGCCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | GGTTGCCACTTCCAGCTGCAGAGCCAAGCTCCCTTTTaGGCCCGCCAGGCCAGTCCGCGGGGTCCCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GCHFQLQSQAPF*ARQASPRGPKG Trigger: ACCCTTGGGACCCCGCGGACTGGCCTGGCGGGCCCAAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | AAGGGACAAGGTGGCCGGCACTGGGTCAGCAGGAGCTaGCCCACCTTCCGGAACAACCTGCCCAGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KGQGGRHWVSRS*PTFRNNLPRGG Trigger: CCCACCTCTGGGCAGGTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTGTCCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | ATCGAGTGTGTAGGAGACGCCCACAGCGGGTCCCCCTaGCTCCTGGAGGGTGAGCAGGAGGTCCTCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IECVGDAHSGSP*LLEGEQEVLVL Trigger: GAGGACGAGGACCTCCTGCTCACCCTCCAGGAGCCAGGGGGACCCGCTGTGGGCGTCTCCTACACACTCGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 90 bp | GGTCCAGAGAGTCCCTTGGTCAGGTTGGTAGGAGACATGGCCGCCTaGGGGGCGCAGGGCCATGTGGGAGCCATCCCGAAACAGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPESPLVRLVGDMAA*GAQGHVGAIPKQHP Trigger: GGGGTGCTGTTTCGGGATGGCTCCCACATGGCCCTGCGCCCCCAAGGCGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTCTGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 90 bp | AAGTGGGCTGGGGACGTCCCTCAGGGTGAAGGTCCAGAGAGTCCCTaGGTCAGGTTGGTAGGAGACATGGCCGCCTTGGGGGCGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KWAGDVPQGEGPESP*VRLVGDMAALGAQG Trigger: GCCCTGCGCCCCCAAGGCGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTCTGGACCTTCACCCTGAGGGACGTCCCCAGCCCACTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | TCAGCAAAGTGTGCGTGGAAGGCCACGATGTTGCGGTaGCGCAGGCGGCTGTGCAGGGCGATCTCACGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAKCAWKATMLR*RRRLCRAISRS Trigger: GGAGCGTGAGATCGCCCTGCACAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | CCCAGAGGTGGGGGAAAGGCAAACACAGGTGGGCTGTaGCAGGAATGTGGAGGCAGCCGCTCCGGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRGGGKANTGGL*QECGGSRSGVK Trigger: CTTCACCCCGGAGCGGCTGCCTCCACATTCCTGCCACAGCCCACCTGTGTTTGCCTTTCCCCCACCTCTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | CCACTTAGGAGCCCAGAGAACAGGCCGCTGCTCCCCTaGGGGGTCCTGTCCAGCCATAGGTCCTGCGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PLRSPENRPLLP*GVLSSHRSCVQ Trigger: TTGGACGCAGGACCTATGGCTGGACAGGACCCCCCAGGGGAGCAGCGGCCTGTTCTCTGGGCTCCTAAGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | GGCAAAGAGCCGCAGGACAGCCAGCTTGGCACGAAGTaGGCTGGGGACGTCCCTCAGGGTGAAGGTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GKEPQDSQLGTK*AGDVPQGEGPE Trigger: CTCTGGACCTTCACCCTGAGGGACGTCCCCAGCCCACTTCGTGCCAAGCTGGCTGTCCTGCGGCTCTTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 72 bp | GGGCCATGTGGGAGCCATCCCGAAACAGCACCCCACTaGCCCCATCCGACAGCTGGTAGCCGAAGCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: GPCGSHPETAPH*PHPTAGSRSHT Trigger: AGTATGGCTTCGGCTACCAGCTGTCGGATGGGGGCAGTGGGGTGCTGTTTCGGGATGGCTCCCACATGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | AGTCCCTTGGTCAGGTTGGTAGGAGACATGGCCGCCTaGGGGGCGCAGGGCCATGTGGGAGCCATCCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SPLVRLVGDMAA*GAQGHVGAIPK Trigger: TTTCGGGATGGCTCCCACATGGCCCTGCGCCCCCAAGGCGGCCATGTCTCCTACCAACCTGACCAAGGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | GGGGACGTCCCTCAGGGTGAAGGTCCAGAGAGTCCCTaGGTCAGGTTGGTAGGAGACATGGCCGCCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GDVPQGEGPESP*VRLVGDMAALG Trigger: CCCCAAGGCGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTCTGGACCTTCACCCTGAGGGACGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 72 bp | CAGCACCATGTACACGTGATCGCGGTCAGCAAAGTGTaGGTGGAAGGCCACGATGTTGCGGTGGCGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QHHVHVIAVSKV*VEGHDVAVAQA Trigger: CGCCTGCGCCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGATCACGTGTACATGGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | GCACGATGCGTTGTTGGTGCAAGTAGCGCAGGCCGCTaGCCAGGCCCCGAAGGTAATAGCGCACTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARCVVGASSAGR*PGPEGNSALQA Trigger: AGCCTGAAGTGCGCTATTACCTTCGGGGCCTGGTCAGCGGCCTGCGCTACTTGCACCAACAACGCATCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | CAGACACTCTGTAGCAGATGCAGGCCATGGCGCAGGTaGTGGTGGACTGCAAGGGTGAAGCCATGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QTLCSRCRPWRR*WWTARVKPWLR Trigger: GCGGAGCCATGGCTTCACCCTTGCAGTCCACCATCACCTGCGCCATGGCCTGCATCTGCTACAGAGTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | GCCTCTTTTGAGGTAAAGGGACAAGGTGGCCGGCACTaGGTCAGCAGGAGCTGGCCCACCTTCCGGAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASFEVKGQGGRH*VSRSWPTFRNN Trigger: GTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTGTCCCTTTACCTCAAAAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | GAGGTAGTGGCCGTCACGGATGTTTTGGTACATCTCTaGCAAGGGTGCCGCGGCAAAGGGTGGCGTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVVAVTDVLVHL*QGCRGKGWRAC Trigger: ACAGGCACGCCACCCTTTGCCGCGGCACCCTTGTCAGAGATGTACCAAAACATCCGTGACGGCCACTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 72 bp | TTCGGCCCTCGGTGCAGAGAGGATCCCTTTCCTCGTTaGCGGCTTCCATGTGGTCTGGTTCTGTGCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FGPRCREDPFPR*RLPCGLVLCPL Trigger: AAGAGGGCACAGAACCAGACCACATGGAAGCCGGCAACGAGGAAAGGGATCCTCTCTGCACCGAGGGCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | CAGAGAGGATCCCTTTCCTCGTTGCCGGCTTCCATGTaGTCTGGTTCTGTGCCCTCTTCTCCAGGGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRGSLSSLPASM*SGSVPSSPGPE Trigger: CTCAGGCCCTGGAGAAGAGGGCACAGAACCAGACCACATGGAAGCCGGCAACGAGGAAAGGGATCCTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | AGCAGGAGGTCCTCGTCCTCCCCACTTAGCACCAGCTaGGTTTGGGAGGTTTTGAGGCTGACCTGCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSSSSPLSTS*VWEVLRLTCTV Trigger: GACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCTCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | ATTCGGCCCTCGGTGCAGAGAGGATCCCTTTCCTCGTaGCCGGCTTCCATGTGGTCTGGTTCTGTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: IRPSVQRGSLSS*PASMWSGSVPS Trigger: AGAGGGCACAGAACCAGACCACATGGAAGCCGGCAACGAGGAAAGGGATCCTCTCTGCACCGAGGGCCGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | ACCTGGCGGCTACAATACTCCAGCACCATGTACACGTaGTCGCGGTCAGCAAAGTGTGCGTGGAAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: TWRLQYSSTMYT*SRSAKCAWKAT Trigger: CGTGGCCTTCCACGCACACTTTGCTGACCGCGATCACGTGTACATGGTGCTGGAGTATTGTAGCCGCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039836.15 |
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| CDS TCA 72 bp | CAGGAATGTGGAGGCAGCCGCTCCGGGGTGAAGCCCTaGCTGAAGAAGTCATCTTGCAGTAAGTGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QECGGSRSGVKP*LKKSSCSKWSR Trigger: CCTGGACCACTTACTGCAAGATGACTTCTTCAGTCAGGGCTTCACCCCGGAGCGGCTGCCTCCACATTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS TCA 72 bp | GACTGGCGGCTACAATACTCCAGCACCATGTACACGTaGTCGCGGTCAGCAAAGTGTGCGTGGAAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: DWRLQYSSTMYT*SRSAKCAWKAT Trigger: CGTGGCCTTCCACGCACACTTTGCTGACCGCGATCACGTGTACATGGTGCTGGAGTATTGTAGCCGCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105351.2 |
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| CDS TCA 72 bp | TCAGGCTCTGTCAGAGTCCGCCGCACTTTCAGCACATaGGCCAAGGACTGGCGGCTACAATACTCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SGSVRVRRTFST*AKDWRLQYSST Trigger: GGTGCTGGAGTATTGTAGCCGCCAGTCCTTGGCTCATGTGCTGAAAGTGCGGCGGACTCTGACAGAGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105351.2 |
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| CDS GCA 72 bp | AAGCAGAGGAACAGTTTTCTGGTTGCCACTTCCAGCTaGAGAGCCAAGCTCCCTTTTGGGCCCGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KQRNSFLVATSS*RAKLPFGPARP Trigger: TGGCCTGGCGGGCCCAAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAACCAGAAAACTGTTCCTCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | AGGTCCTCGTCCTCCCCACTTAGCACCAGCTGGGTTTaGGAGGTTTTGAGGCTGACCTGCACTGTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: RSSSSPLSTSWV*EVLRLTCTVPL Trigger: CAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS GCA 72 bp | AGGTCCTGCGTCCAAGCAGAGGAACAGTTTTCTGGTTaGCACTTCCAGCTGCAGAGCCAAGCTCCCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RSCVQAEEQFSG*HFQLQSQAPFW Trigger: CCAAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAACCAGAAAACTGTTCCTCTGCTTGGACGCAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | TCCTCCCCACTTAGCACCAGCTGGGTTTGGGAGGTTTaGAGGCTGACCTGCACTGTCCCATTGCTAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPLSTSWVWEV*RLTCTVPLLNS Trigger: GCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 90 bp | ACCAGCTGGGTTTGGGAGGTTTTGAGGCTGACCTGCACTGTCCCATaGCTAAACAGCATGACCATAGCCTGGGAGTCAGCAATGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: TSWVWEVLRLTCTVP*LNSMTIAWESAMKL Trigger: GAGCTTCATTGCTGACTCCCAGGCTATGGTCATGCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAACCCAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | GTTTGGGAGGTTTTGAGGCTGACCTGCACTGTCCCATaGCTAAACAGCATGACCATAGCCTGGGAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VWEVLRLTCTVP*LNSMTIAWESA Trigger: TGCTGACTCCCAGGCTATGGTCATGCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAACCTCCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 90 bp | ACACGGGCAGCCAGCCCCAGGTCACCTATCTTAACCTCCATGTTCTaGTTAAGGAAGAAATTACTGGGTTTCAGGTCCCTGTGCACGATG | + |
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Preference number: 6 (lower is better) Translates to: TRAASPRSPILTSMF*LRKKLLGFRSLCTM Trigger: CATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAGGTTAAGATAGGTGACCTGGGGCTGGCTGCCCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CAA 72 bp | GTGTACATGATGCATCCCAGAGCCCAGATGTCAGATTaGCACGAGTGTCCATTTCGGGACACCACTTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VYMMHPRAQMSD*HECPFRDTTSG Trigger: ACCTGAAGTGGTGTCCCGAAATGGACACTCGTGCAAATCTGACATCTGGGCTCTGGGATGCATCATGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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| CDS CCA 72 bp | TGCACTGTCCCATTGCTAAACAGCATGACCATAGCCTaGGAGTCAGCAATGAAGCTCAGCAGAGAGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: CTVPLLNSMTIA*ESAMKLSREMS Trigger: TGACATCTCTCTGCTGAGCTTCATTGCTGACTCCCAGGCTATGGTCATGCTGTTTAGCAATGGGACAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039836.15 ENSMUST00000105351.2 |
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