Pregenerated sensors for PLK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025758Ensembl transcript IDs: ENSMUST00000026858.11, ENSMUST00000167556.7, ENSMUST00000203295.3, ENSMUST00000203895.3, ENSMUST00000204032.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACTGTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTGCTTGCTaGCGCCTGCTCTCCCTTACAGCAGCTTGGGTCCACAGGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GLCGESGTIHAQSAC*RLLSLTAAWVHRRS Trigger: GCTCCTCCTGTGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACACAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR GCA 90 bp | GTCCTGGGGACTGTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTaGTTGCTGACGCCTGCTCTCCCTTACAGCAGCTTGGGTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: VLGTVWGKRHYSRSV*LLTPALPYSSLGPQ Trigger: CTGTGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 90 bp | TGTGTGGCCAAGTCCTTCAACTGTCACAGTGGAAGGACTGAGTCCTaGGGACTGTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: CVAKSFNCHSGRTES*GLCGESGTIHAQSA Trigger: AGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGACTCAGTCCTTCCACTGTGACAGTTGAAGGACTTGGCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 90 bp | TCTTGCTTTGTTCAGAATGAGGATGTAGGCCCGGCTCCTGTGGCATaGCCTCAGGCTTATGGTGATGTGCACTCATGTATTTCATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SCFVQNEDVGPAPVA*PQAYGDVHSCISWH Trigger: GTGCCATGAAATACATGAGTGCACATCACCATAAGCCTGAGGTCATGCCACAGGAGCCGGGCCTACATCCTCATTCTGAACAAAGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 90 bp | GAAGATACTCCTGCCTGGACAACCAACTGTGACCCATCATTAAACTaGACCCACACAGCTCCGCTAGTTAGCTGTGTAGCCCAACCAACA | + |
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Preference number: 1 (lower is better) Translates to: EDTPAWTTNCDPSLN*THTAPLVSCVAQPT Trigger: TGTTGGTTGGGCTACACAGCTAACTAGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAGGCAGGAGTATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 90 bp | GAAGACAGACTTAACCGATCTGCAGGGTTTCTACGAAGTAACTGGTaGATAAGGTCCTGGGCCTCTCGTGACAAAAAGGCTGGCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: EDRLNRSAGFLRSNW*IRSWASRDKKAGIS Trigger: TGAAATGCCAGCCTTTTTGTCACGAGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAACCCTGCAGATCGGTTAAGTCTGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 90 bp | ACAGAAGACAGACTTAACCGATCTGCAGGGTTTCTACGAAGTAACTaGTGGATAAGGTCCTGGGCCTCTCGTGACAAAAAGGCTGGCATT | + |
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Preference number: 1 (lower is better) Translates to: TEDRLNRSAGFLRSN*WIRSWASRDKKAGI Trigger: AATGCCAGCCTTTTTGTCACGAGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAACCCTGCAGATCGGTTAAGTCTGTCTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 90 bp | CTACAGTCCCTACGTCTTTACTCTTTGGTGAAGGATTTCGTGACATaGAAGGATGGTCCAACACAGAAGACAGACTTAACCGATCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LQSLRLYSLVKDFVT*KDGPTQKTDLTDLQ Trigger: CTGCAGATCGGTTAAGTCTGTCTTCTGTGTTGGACCATCCTTTCATGTCACGAAATCCTTCACCAAAGAGTAAAGACGTAGGGACTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 90 bp | AGAACCCCTGCTTCTCTTTTCCTCCTCAGAGATTACAGATTCCAGTaGCAAGCAAATACGGTGACCCTCATTAGCATGGTCCATATATAC | + |
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Preference number: 1 (lower is better) Translates to: RTPASLFLLRDYRFQ*QANTVTLISMVHIY Trigger: GTATATATGGACCATGCTAATGAGGGTCACCGTATTTGCTTGTCACTGGAATCTGTAATCTCTGAGGAGGAAAAGAGAAGCAGGGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 90 bp | CCTACGTCTTTACTCTTTGGTGAAGGATTTCGTGACATGAAAGGATaGTCCAACACAGAAGACAGACTTAACCGATCTGCAGGGTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: PTSLLFGEGFRDMKG*SNTEDRLNRSAGFL Trigger: TAGAAACCCTGCAGATCGGTTAAGTCTGTCTTCTGTGTTGGACCATCCTTTCATGTCACGAAATCCTTCACCAAAGAGTAAAGACGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 90 bp | TTTTCCTCCTCAGAGATTACAGATTCCAGTGACAAGCAAATACGGTaGCCCTCATTAGCATGGTCCATATATACTTTTACTTCCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: FSSSEITDSSDKQIR*PSLAWSIYTFTSSF Trigger: GAAAGAGGAAGTAAAAGTATATATGGACCATGCTAATGAGGGTCACCGTATTTGCTTGTCACTGGAATCTGTAATCTCTGAGGAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 90 bp | GTTCAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTaGAGCAAAATTAGATGTCCTAGCCTTATGACCACTATATTAGGT | + |
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Preference number: 1 (lower is better) Translates to: VQYKHRSTNFEGLHA*SKIRCPSLMTTILG Trigger: ACCTAATATAGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
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| 3UTR CAA 90 bp | CTGGGGACTGTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTGCTaGCTGACGCCTGCTCTCCCTTACAGCAGCTTGGGTCCACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LGTVWGKRHYSRSVC*LTPALPYSSLGPQE Trigger: CTCCTGTGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACACAGTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | TCACGCTCAGTCTGCTTGCTGACGCCTGCTCTCCCTTACAGCAGCTTGGGTCCAGACAAGCAAATACGGTaGCCCTCATTAGCATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SRSVCLLTPALPYSSLGPDKQIR*PSLAWS Trigger: GGACCATGCTAATGAGGGTCACCGTATTTGCTTGTC...TGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | TCACGCTCAGTCTGCTTGCTGACGCCTGCTCTCCCTTACAGCAGCTTGGGTCCATGTACCATTTCCATCTaGGGTGTCTGGTCTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SRSVCLLTPALPYSSLGPCTISI*GVWSAN Trigger: ATTTGCAGACCAGACACCTCAGATGGAAATGGTACA...TGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CAA 90 bp | CGCCAGTATTTTTCTGGTAGATTGTCAAAGCTGTACCTACTGATGTaGTCAGTAGGCAAGGGAGGTCTGTCAGCAAGAGGAAAGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RQYFSGRLSKLYLLM*SVGKGGLSARGKPL Trigger: AAGAGGCTTTCCTCTTGCTGACAGACCTCCCTTGCCTACTGACAACATCAGTAGGTACAGCTTTGACAATCTACCAGAAAAATACTGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTCAGTAGGCAAGGGAGGTCTGTCAGCAAGAGGAAAGCCTCTTCCATCGTTCTTATTTGGAAGTGGTTaGCCAACCAAAAGTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSVGKGGLSARGKPLPSFLFGSG*PTKSLL Trigger: CAGAAGACTTTTGGTTGGTCAACCACTTCCAAATAA...GAACGATGGAAGAGGCTTTCCTCTTGCTGACAGACCTCCCTTGCCTACTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGTAGGCAAGGGAGGTCTGTCAGCAAGAGGAAAGCCTCTTCCATCGTTCATAGTGCTTTTCATGTaGCATATTCAACTGCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSVGKGGLSARGKPLPSFIVLFM*HIQLRC Trigger: GCAACGCAGTTGAATATGCCACATGAAAAGCACTAT...GAACGATGGAAGAGGCTTTCCTCTTGCTGACAGACCTCCCTTGCCTACTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCAAGAGGAAAGCCTCTTCCATCGTTCGGGTAATAAACAGTGATCATAGTCTACGAAGTAACTGGTaGATAAGGTCCTGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VSKRKASSIVRVINSDHSLRSNW*IRSWAS Trigger: AGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAG...ACTATGATCACTGTTTATTACCCGAACGATGGAAGAGGCTTTCCTCTTGCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGTAGGCAAGGGAGGTCTGTCAGCAAGAGGAAAGCCTCTTCCATCGTTCTTACAGCATGAACATTaGCAGAAGTATCAGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: LSVGKGGLSARGKPLPSFLQHEH*QKYQHS Trigger: AGAATGCTGATACTTCTGCCAATGTTCATGCTGTAA...GAACGATGGAAGAGGCTTTCCTCTTGCTGACAGACCTCCCTTGCCTACTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | AGCACTTCTTTCACATATCCTTCAGACGCACACTCTCTCAGAAGCTCCACACACATTGGCTTTAATCTGTaGGCAATCAGAGGAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: STSFTYPSDAHSLRSSTHIGFNL*AIRGDV Trigger: TACATCTCCTCTGATTGCTCACAGATTAAAGCCAAT...GTGTGTGGAGCTTCTGAGAGAGTGTGCGTCTGAAGGATATGTGAAAGAAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTGGAAAGTGTAGCATGCCCACTATCCATTGAGTCCTCTACAGTCCCTACGTGGCATTTCATAATCTaGCAGGACTACTTTGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: VVESVACPLSIESSTVPTWHFII*QDYFVQ Trigger: TTGAACAAAGTAGTCCTGGCAGATTATGAAATGCCA...CGTAGGGACTGTAGAGGACTCAATGGATAGTGGGCATGCTACACTTTCCACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTAGTTGCAATTTCTGGTaGAATATAATTAGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTSCNFW*NIIRSP Trigger: GGGACTCCTAATTATATTTCACCAGAAATTGCAACT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCAAACATACAGCCCAATaGCCAAATATCAGATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTKHTAQ*PNIRFK Trigger: CTTGAATCTGATATTTGGTCATTGGGCTGTATGTTT...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | GGGGAAAGCGGCACTATTCACGCTCAGTCTGCTTGCTaGCGCCTGCTCTCCCTTACAGCAGCTTGGGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: GESGTIHAQSAC*RLLSLTAAWVH Trigger: GTGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR GCA 72 bp | GCGGCACTATTCACGCTCAGTCTGCTTGCTGACGCCTaGTCTCCCTTACAGCAGCTTGGGTCCACAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: AALFTLSLLADA*SPLQQLGSTGG Trigger: TCCTCCTGTGGACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR GCA 72 bp | ACTGTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTaGTTGCTGACGCCTGCTCTCCCTTACAGCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TVWGKRHYSRSV*LLTPALPYSSL Trigger: CAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | AAGTCCTTCAACTGTCACAGTGGAAGGACTGAGTCCTaGGGACTGTGTGGGGAAAGCGGCACTATTCACGCT | + |
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Preference number: 3 (lower is better) Translates to: KSFNCHSGRTES*GLCGESGTIHA Trigger: AGCGTGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGACTCAGTCCTTCCACTGTGACAGTTGAAGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | CCTGCCTGGACAACCAACTGTGACCCATCATTAAACTaGACCCACACAGCTCCGCTAGTTAGCTGTGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: PAWTTNCDPSLN*THTAPLVSCVA Trigger: GGCTACACAGCTAACTAGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | GTTCAGAATGAGGATGTAGGCCCGGCTCCTGTGGCATaGCCTCAGGCTTATGGTGATGTGCACTCATGTATT | + |
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Preference number: 3 (lower is better) Translates to: VQNEDVGPAPVA*PQAYGDVHSCI Trigger: AATACATGAGTGCACATCACCATAAGCCTGAGGTCATGCCACAGGAGCCGGGCCTACATCCTCATTCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR GCA 72 bp | CGGCTCCTGTGGCATGACCTCAGGCTTATGGTGATGTaGACTCATGTATTTCATGGCACTCAGCTGCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: RLLWHDLRLMVM*THVFHGTQLLY Trigger: GTAAAGCAGCTGAGTGCCATGAAATACATGAGTGCACATCACCATAAGCCTGAGGTCATGCCACAGGAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | ACTGATGGAAGATACTCCTGCCTGGACAACCAACTGTaGCCCATCATTAAACTGAACCCACACAGCTCCGCT | + |
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Preference number: 3 (lower is better) Translates to: TDGRYSCLDNQL*PIIKLNPHSSA Trigger: AGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAGGCAGGAGTATCTTCCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | CTTAACCGATCTGCAGGGTTTCTACGAAGTAACTGGTaGATAAGGTCCTGGGCCTCTCGTGACAAAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LNRSAGFLRSNW*IRSWASRDKKA Trigger: AGCCTTTTTGTCACGAGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAACCCTGCAGATCGGTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | AGACTTAACCGATCTGCAGGGTTTCTACGAAGTAACTaGTGGATAAGGTCCTGGGCCTCTCGTGACAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: RLNRSAGFLRSN*WIRSWASRDKK Trigger: CTTTTTGTCACGAGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAACCCTGCAGATCGGTTAAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | CAGCATGAACATTGGCAGAAGTATCAGCATTCTTGCTaGCTCTCGTGTCAGTCCAAGCGTTTCGTAACGTGT | + |
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Preference number: 3 (lower is better) Translates to: QHEHWQKYQHSC*LSCQSKRFVTC Trigger: ACACGTTACGAAACGCTTGGACTGACACGAGAGCCAGCAAGAATGCTGATACTTCTGCCAATGTTCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CAA 90 bp | TATTTGGAAGTGGTTGACCAACCAAAAGTCTTCTGTCAAGTAGGCTGCCACTCACATGCCCACTATCCATaGAGTCCTCTACAGTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: YLEVVDQPKVFCQVGCHSHAHYP*SPLQSL Trigger: TAGGGACTGTAGAGGACTCAATGGATAGTGGGCATG...TGAGTGGCAGCCTACTTGACAGAAGACTTTTGGTTGGTCAACCACTTCCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | CCTCAGGCTTATGGTGATGTGCACTCATGTATTTCATaGCACTCAGCTGCTTTACAGCATGAACATTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PQAYGDVHSCIS*HSAALQHEHWQ Trigger: CTGCCAATGTTCATGCTGTAAAGCAGCTGAGTGCCATGAAATACATGAGTGCACATCACCATAAGCCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTCAGTAGGCAAGGGAGGTCTGTCAGCAAGAGGAAAGCCTCTTCCATCGTTCTTCTGGATTTCCCCATaGAGTACAAAAATTACTTCC | + |
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Preference number: 3 (lower is better) Translates to: LSVGKGGLSARGKPLPSFFWISP*STKITS Trigger: GGAAGTAATTTTTGTACTCAATGGGGAAATCCAGAA...GAACGATGGAAGAGGCTTTCCTCTTGCTGACAGACCTCCCTTGCCTACTGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | GCTTCTCTTTTCCTCCTCAGAGATTACAGATTCCAGTaGCAAGCAAATACGGTGACCCTCATTAGCATGGTC | + |
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Preference number: 3 (lower is better) Translates to: ASLFLLRDYRFQ*QANTVTLISMV Trigger: GACCATGCTAATGAGGGTCACCGTATTTGCTTGTCACTGGAATCTGTAATCTCTGAGGAGGAAAAGAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR CCA 72 bp | ATTTCATGGCACTCAGCTGCTTTACAGCATGAACATTaGCAGAAGTATCAGCATTCTTGCTGGCTCTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: ISWHSAALQHEH*QKYQHSCWLSC Trigger: ACACGAGAGCCAGCAAGAATGCTGATACTTCTGCCAATGTTCATGCTGTAAAGCAGCTGAGTGCCATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | AATTGTTGTGGAAAGTGTAGCATGCCCACTATCCATTaGGTCCTCTACAGTCCCTACGTCTTTACTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: NCCGKCSMPTIH*VLYSPYVFTLW Trigger: CCAAAGAGTAAAGACGTAGGGACTGTAGAGGACTCAATGGATAGTGGGCATGCTACACTTTCCACAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | TGCAGATTCCCAAACCACTGCTGTACCATTTCCATCTaGGGTGTCTGGTCTGCAAATGGAAAAGGAGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: CRFPNHCCTISI*GVWSANGKGVF Trigger: AAAAACTCCTTTTCCATTTGCAGACCAGACACCTCAGATGGAAATGGTACAGCAGTGGTTTGGGAATCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | CTCATGTATTTCATGGCACTCAGCTGCTTTACAGCATaGACATTGGCAGAAGTATCAGCATTCTTGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: LMYFMALSCFTA*TLAEVSAFLLA Trigger: AGCCAGCAAGAATGCTGATACTTCTGCCAATGTTCATGCTGTAAAGCAGCTGAGTGCCATGAAATACATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | TTCATTTTCTCCATACCTAGTTGTCTGACCATCTGGTaGTGTGTAACTGATGGAAGATACTCCTGCCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: FIFSIPSCLTIW*CVTDGRYSCLD Trigger: GTCCAGGCAGGAGTATCTTCCATCAGTTACACATCACCAGATGGTCAGACAACTAGGTATGGAGAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGCTGTAATTGTTGTGGAAAGTGTAGCATGCCCACTATCCATTGAGTCCTCTCATGTGCACTTCGAGTaGCAATTTCTGGTGAAATAT | + |
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Preference number: 3 (lower is better) Translates to: EAVIVVESVACPLSIESSHVHFE*QFLVKY Trigger: ATATTTCACCAGAAATTGCAACTCGAAGTGCACATG...AGAGGACTCAATGGATAGTGGGCATGCTACACTTTCCACAACAATTACAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR-3UTR CAA 90 bp | AGCACTTCTTTCACATATCCTTCAGACGCACACTCTCTCAGAAGCTCCACACACTTGTTCAATGTGTTCTaGACTGTGTCAGTGTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: STSFTYPSDAHSLRSSTHLFNVF*TVSVSK Trigger: TTTTGACACTGACACAGTCAAGAACACATTGAACAA...GTGTGTGGAGCTTCTGAGAGAGTGTGCGTCTGAAGGATATGTGAAAGAAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | CTACGTCTTTACTCTTTGGTGAAGGATTTCGTGACATaGAAGGATGGTCCAACACAGAAGACAGACTTAACC | + |
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Preference number: 3 (lower is better) Translates to: LRLYSLVKDFVT*KDGPTQKTDLT Trigger: GGTTAAGTCTGTCTTCTGTGTTGGACCATCCTTTCATGTCACGAAATCCTTCACCAAAGAGTAAAGACGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| 3UTR TCA 72 bp | TCAGAGATTACAGATTCCAGTGACAAGCAAATACGGTaGCCCTCATTAGCATGGTCCATATATACTTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: SEITDSSDKQIR*PSLAWSIYTFT Trigger: AGTAAAAGTATATATGGACCATGCTAATGAGGGTCACCGTATTTGCTTGTCACTGGAATCTGTAATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| 3UTR CCA 72 bp | AAACATAGGAGCACAAACTTTGAAGGATTACATGCTTaGAGCAAAATTAGATGTCCTAGCCTTATGACCACT | + |
|
Preference number: 3 (lower is better) Translates to: KHRSTNFEGLHA*SKIRCPSLMTT Trigger: AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
||
| 3UTR CAA 72 bp | GTGTGGGGAAAGCGGCACTATTCACGCTCAGTCTGCTaGCTGACGCCTGCTCTCCCTTACAGCAGCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWGKRHYSRSVC*LTPALPYSSLG Trigger: ACCCAAGCTGCTGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGCGTGAATAGTGCCGCTTTCCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCGCTCAGTCTGCTTGCTaGCGCCTGCTCTCCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTAQSAC*RLLSLT Trigger: TGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGC...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AGCACTTCTTTCACATATCCTTCAGACGCACACTCTCTCAGAAGCTCCACACACAGTGCCTTCCCTTTCTaGGAAAGGCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STSFTYPSDAHSLRSSTHSAFPF*ERLHSV Trigger: AACAGAATGAAGCCTTTCTCAGAAAGGGAAGGCACT...GTGTGTGGAGCTTCTGAGAGAGTGTGCGTCTGAAGGATATGTGAAAGAAGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAGGAAGGACTGAGTCCTaGGGACTGTGTGGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALGRTES*GLCGES Trigger: GCTTTCCCCACACAGTCCCCAGGACTCAGTCCTTCC...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | AGCACTTCTTTCACATATCCTTCAGACGCACACTCTCTCAGAAGCTCCACACACGGTCCCGGTGCAATATaGCATGAGAATGAAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: STSFTYPSDAHSLRSSTHGPGAI*HENEDI Trigger: TATATCTTCATTCTCATGGCATATTGCACCGGGACC...GTGTGTGGAGCTTCTGAGAGAGTGTGCGTCTGAAGGATATGTGAAAGAAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAGTCCTGGGGACTGTGTaGGGAAAGCGGCACTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALVLGTV*GKRHYS Trigger: TGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGAC...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTGTCCTGGGGACTGTGTaGGGAAAGCGGCACTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTVLGTV*GKRHYS Trigger: TGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGAC...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTGTGGCAGTCGCTGTGTaGCCAAGTCCTTCAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTVAVAV*PSPSTV Trigger: GACAGTTGAAGGACTTGGCCACACAGCGACTGCCAC...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAGTGGCAGTCGCTGTGTaGCCAAGTCCTTCAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALVAVAV*PSPSTV Trigger: GACAGTTGAAGGACTTGGCCACACAGCGACTGCCAC...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCACACACACCTCCTCTaGATCAAGGATGCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTHTHLL*IKDAHH Trigger: GTGGTGAGCATCCTTGATTCAGAGGAGGTGTGTGTG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026858.11 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGCTCAGTCTGCTTGCTaGCGCCTGCTCTCCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRAQSAC*RLLSLT Trigger: TGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | GCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCATTTATTAGCTCAGTCTGCTTGCTaGCGCCTGCTCTCCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AEILSDTSVESQPKSHLLAQSAC*RLLSLT Trigger: TGTAAGGGAGAGCAGGCGTCAGCAAGCAGACTGAGC...TAATAAATGACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTCGCAGGTATCGAGAATaGGGCCTCTCTTCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTRRYRE*GLSSAS Trigger: AGATGCAGAAGAGAGGCCGCATTCTCGATACCTGCG...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTCAGAGGAATGAGCTCTaGGCAGGTATCGAGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTQRNEL*AGIENA Trigger: CGCATTCTCGATACCTGCGCAGAGCTCATTCCTCTG...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGTAATTGTTGTGGAAAGTGTAGCATGCCCACTATCCATTGAGTCCTCTGAGGGGTGTTTCAACTaGCAATGTATTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAVIVVESVACPLSIESSEGCFN*QCIFTS Trigger: TGAGGTGAAAATACATTGCCAGTTGAAACACCCCTC...AGAGGACTCAATGGATAGTGGGCATGCTACACTTTCCACAACAATTACAGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | GTATTTGCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCATGTCCTGGGGACTGTGTaGGGAAAGCGGCACTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFAEILSDTSVESQPKSHVLGTV*GKRHYS Trigger: TGAATAGTGCCGCTTTCCCCACACAGTCCCCAGGAC...ATGACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGCAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCATTTATTAGGAAGGACTGAGTCCTaGGGACTGTGTGGGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AEILSDTSVESQPKSHLLGRTES*GLCGES Trigger: GCTTTCCCCACACAGTCCCCAGGACTCAGTCCTTCC...TAATAAATGACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR CCA 90 bp | GTATTTGCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCATGTGGCAGTCGCTGTGTaGCCAAGTCCTTCAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFAEILSDTSVESQPKSHVAVAV*PSPSTV Trigger: GACAGTTGAAGGACTTGGCCACACAGCGACTGCCAC...ATGACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGCAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCGACAAGCAAATACGGTaGCCCTCATTAGCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTDKQIR*PSLAWS Trigger: GGACCATGCTAATGAGGGTCACCGTATTTGCTTGTC...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTGACCCATCATTAAACTaGACCCACACAGCTCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTDPSLN*THTAPL Trigger: TAGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTC...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAGACCCATCATTAAACTaGACCCACACAGCTCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALDPSLN*THTAPL Trigger: TAGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTC...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTACTACGAAGTAACTGGTaGATAAGGTCCTGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALLRSNW*IRSWAS Trigger: AGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAG...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTGAAGATACTCCTGCCTaGACAACCAACTGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTEDTPA*TTNCDP Trigger: TGGGTCACAGTTGGTTGTCCAGGCAGGAGTATCTTC...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | GTATTTGCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCATGACCCATCATTAAACTaGACCCACACAGCTCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VFAEILSDTSVESQPKSHDPSLN*THTAPL Trigger: TAGCGGAGCTGTGTGGGTTCAGTTTAATGATGGGTC...ATGACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGCAAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTAACAGTGATCTCCTCTaGATCAAGGATGCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTNSDLL*IKDAHH Trigger: GTGGTGAGCATCCTTGATTCAGAGGAGATCACTGTT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAATCTGGTGCATGAAGTaGCTAGCTTCCCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALIWCMK*LASLSE Trigger: CTCAGAAAGGGAAGCTAGGCACTTCATGCACCAGAT...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCATCTGGTGCATGAAGTaGCTAGCTTCCCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTIWCMK*LASLSE Trigger: CTCAGAAAGGGAAGCTAGGCACTTCATGCACCAGAT...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTCGCAGGTATCGAGAATaGGGCCTCTCTTCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIRRYRE*GLSSAS Trigger: AGATGCAGAAGAGAGGCCGCATTCTCGATACCTGCG...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTCAGAGGAATGAGCTCTaGGCAGGTATCGAGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIQRNEL*AGIENA Trigger: CGCATTCTCGATACCTGCGCAGAGCTCATTCCTCTG...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTTTTCTACGAAGTAACTaGTGGATAAGGTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTFLRSN*WIRSWA Trigger: GGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAA...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCCTAGCTTCCCTTTCTaGGAAAGGCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTPSFPF*ERLHSV Trigger: AACAGAATGAAGCCTTTCTCAGAAAGGGAAGCTAGG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTAAGGATTTCGTGACATaGAAGGATGGTCCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTKDFVT*KDGPTQ Trigger: CTGTGTTGGACCATCCTTTCATGTCACGAAATCCTT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTATGCCCACTATCCATTaGGTCCTCTACAGTCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIMPTIH*VLYSPY Trigger: GTAGGGACTGTAGAGGACTCAATGGATAGTGGGCAT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGTTTTTGCTCGAGACTaGTTAGAGGGGCTGGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRVFARD*LEGLAL Trigger: TAGAGCCAGCCCCTCTAATCAGTCTCGAGCAAAAAC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTTGTACCATTTCCATCTaGGGTGTCTGGTCTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTCTISI*GVWSAN Trigger: ATTTGCAGACCAGACACCTCAGATGGAAATGGTACA...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAACCTCAGGCTTATGGTaGTGTGCACTCATGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALTSGLW*CALMYF Trigger: GAAATACATGAGTGCACATCACCATAAGCCTGAGGT...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGACAAGCAAATACGGTaGCCCTCATTAGCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRDKQIR*PSLAWS Trigger: GGACCATGCTAATGAGGGTCACCGTATTTGCTTGTC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCTGGACAACCAACTGTaGCCCATCATTAAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTLDNQL*PIIKLN Trigger: GTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCAGAATGAAGAACCCCTaGTTCTCTTTTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTRMKNP*FSFPPQ Trigger: CTGAGGAGGAAAAGAGAAGCAGGGGTTCTTCATTCT...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAAGAATGAAGAACCCCTaGTTCTCTTTTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALRMKNP*FSFPPQ Trigger: CTGAGGAGGAAAAGAGAAGCAGGGGTTCTTCATTCT...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTACCTGTGATAATCTGGTaGATGAAGTGCCTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALPVIIW*MKCLPF Trigger: AAAGGGAAGGCACTTCATGCACCAGATTATCACAGG...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTCTACGAAGTAACTGGTaGATAAGGTCCTGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKILRSNW*IRSWAS Trigger: AGAGGCCCAGGACCTTATCCACCAGTTACTTCGTAG...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGAAGATACTCCTGCCTaGACAACCAACTGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIREDTPA*TTNCDP Trigger: TGGGTCACAGTTGGTTGTCCAGGCAGGAGTATCTTC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | AATGTATTTGCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTGAAGATACTCCTGCCTaGACAACCAACTGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVFAEILSDTSVESQPKSEDTPA*TTNCDP Trigger: TGGGTCACAGTTGGTTGTCCAGGCAGGAGTATCTTC...ACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGCAAATACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR TCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTAGATTATAGGGAAGAATaGAGAACCCCTGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALDYREE*RTPASL Trigger: AAGAGAAGCAGGGGTTCTTCATTCTTCCCTATAATC...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTGGTCCCGGTGCAATATaGCATGAGAATGAAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTGPGAI*HENEDI Trigger: TATATCTTCATTCTCATGGCATATTGCACCGGGACC...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCAGGCTTATGGTGATGTaGACTCATGTATTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTRLMVM*THVFHG Trigger: GCCATGAAATACATGAGTGCACATCACCATAAGCCT...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCGAGGGGTGTTTCAACTaGCAATGTATTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTEGCFN*QCIFTS Trigger: TGAGGTGAAAATACATTGCCAGTTGAAACACCCCTC...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTATTCCTGTGATAATCTaGTGCATGAAGTGCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTIPVII*CMKCLA Trigger: AGCTAGGCACTTCATGCACCAGATTATCACAGGAAT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTTTCTACGAAGTAACTaGTGGATAAGGTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIFLRSN*WIRSWA Trigger: GGCCCAGGACCTTATCCACCAGTTACTTCGTAGAAA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGACCTAGCTTCCCTTTCTaGGAAAGGCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRPSFPF*ERLHSV Trigger: AACAGAATGAAGCCTTTCTCAGAAAGGGAAGCTAGG...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCTGTTCAATGTGTTCTTaGCTGTGTCAGTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTCSMCS*LCQCQK Trigger: CTTTTGACACTGACACAGTCAAGAACACATTGAACA...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAAAGGATTTCGTGACATaGAAGGATGGTCCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRKDFVT*KDGPTQ Trigger: CTGTGTTGGACCATCCTTTCATGTCACGAAATCCTT...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTGTACCATTTCCATCTaGGGTGTCTGGTCTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKICTISI*GVWSAN Trigger: ATTTGCAGACCAGACACCTCAGATGGAAATGGTACA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTACCTCAGGCTTATGGTaGTGTGCACTCATGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKITSGLW*CALMYF Trigger: GAAATACATGAGTGCACATCACCATAAGCCTGAGGT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCATTGGCTTTAATCTGTaGGCAATCAGAGGAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTIGFNL*AIRGDV Trigger: TACATCTCCTCTGATTGCTCACAGATTAAAGCCAAT...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTCCATCACTCGATATCTaGAGCACTTCTTTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTPSLDI*STSFTY Trigger: ATATGTGAAAGAAGTGCTTCAGATATCGAGTGATGG...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026858.11 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGACTGGACAACCAACTGTaGCCCATCATTAAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRLDNQL*PIIKLN Trigger: GTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAG...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AATGTATTTGCAGAAATCTTATCAGACACAAGTGTTGAAAGCCAGCCAAAAAGTCTGGACAACCAACTGTaGCCCATCATTAAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NVFAEILSDTSVESQPKSLDNQL*PIIKLN Trigger: GTTCAGTTTAATGATGGGTCACAGTTGGTTGTCCAG...ACTTTTTGGCTGGCTTTCAACACTTGTGTCTGATAAGATTTCTGCAAATACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204032.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTATAGTGCTTTTCATGTaGCATATTCAACTGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTIVLFM*HIQLRC Trigger: GCAACGCAGTTGAATATGCCACATGAAAAGCACTAT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTATTCCTGTGATAATCTaGTGCATGAAGTGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIIPVII*CMKCLP Trigger: GGGAAGGCACTTCATGCACCAGATTATCACAGGAAT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTAAACATACAGCCCAATaGCCAAATATCAGATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTKHTAQ*PNIRFK Trigger: CTTGAATCTGATATTTGGTCATTGGGCTGTATGTTT...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCTCTGGATTTCCCCATTaGGTACAAAAATTACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTSGFPH*VQKLLP Trigger: TGGAAGTAATTTTTGTACTCAATGGGGAAATCCAGA...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATTAGATCTTACTAGCTaGATGAATCTGGAAGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALLDLTS*MNLEAY Trigger: GTATGCTTCCAGATTCATTCAGCTAGTAAGATCTAA...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGATTATAGGGAAGAATaGAGAACCCCTGCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRDYREE*RTPASL Trigger: AAGAGAAGCAGGGGTTCTTCATTCTTCCCTATAATC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGGCATTTCATAATCTaGCAGGACTACTTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALWHFII*QDYFVQ Trigger: TTGAACAAAGTAGTCCTGGCAGATTATGAAATGCCA...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTCTGAGGTGTCTGGTCTaGAAATGGAAAAGGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKILRCLV*KWKRSF Trigger: AAAACTCCTTTTCCATTTGCAGACCAGACACCTCAG...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGACTGAGGTGTCTGGTCTaGAAATGGAAAAGGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRLRCLV*KWKRSF Trigger: AAAACTCCTTTTCCATTTGCAGACCAGACACCTCAG...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAAGGCTTATGGTGATGTaGACTCATGTATTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRRLMVM*THVFHG Trigger: GCCATGAAATACATGAGTGCACATCACCATAAGCCT...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTGAGGGGTGTTTCAACTaGCAATGTATTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIEGCFN*QCIFTS Trigger: TGAGGTGAAAATACATTGCCAGTTGAAACACCCCTC...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
||
| CDS-3UTR CCA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATTACAGCATGAACATTaGCAGAAGTATCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTLKDYMLGAKLDVLALLQHEH*QKYQHS Trigger: AGAATGCTGATACTTCTGCCAATGTTCATGCTGTAA...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGACACTCATGTATTTCATaGCACTCAGCTGCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRHSCIS*HSAALQ Trigger: CTGTAAAGCAGCTGAGTGCCATGAAATACATGAGTG...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTGTTCAATGTGTTCTTaGCTGTGTCAGTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKICSMCS*LCQCQK Trigger: CTTTTGACACTGACACAGTCAAGAACACATTGAACA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTTATTTGGAAGTGGTTaGCCAACCAAAAGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKILFGSG*PTKSLL Trigger: CAGAAGACTTTTGGTTGGTCAACCACTTCCAAATAA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTATTGGCTTTAATCTGTaGGCAATCAGAGGAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIIGFNL*AIRGDV Trigger: TACATCTCCTCTGATTGCTCACAGATTAAAGCCAAT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCCATACTTCTATTCTTaGTTTGTTCAGAATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTPYFYS*FVQNED Trigger: ATCCTCATTCTGAACAAAGCAAGAATAGAAGTATGG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGTTGCAATTTCTGGTaGAATATAATTAGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKISCNFW*NIIRSP Trigger: GGGACTCCTAATTATATTTCACCAGAAATTGCAACT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAATCTTACTAGCTGAATaGATCTGGAAGCATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRILLAE*IWKHTD Trigger: ATCAGTATGCTTCCAGATTCATTCAGCTAGTAAGAT...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR TCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTATCTTACTAGCTGAATaGATCTGGAAGCATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIILLAE*IWKHTD Trigger: ATCAGTATGCTTCCAGATTCATTCAGCTAGTAAGAT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTATTAGCTTCTTGTTCTaGATTTCCCCATTGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIISFLF*ISPLST Trigger: TGTACTCAATGGGGAAATCCAGAACAAGAAGCTAAT...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR CCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTTACAGCATGAACATTaGCAGAAGTATCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKILQHEH*QKYQHS Trigger: AGAATGCTGATACTTCTGCCAATGTTCATGCTGTAA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS-3UTR GCA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTCCATACTTCTATTCTTaGTTTGTTCAGAATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIPYFYS*FVQNED Trigger: ATCCTCATTCTGAACAAAGCAAGAATAGAAGTATGG...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
||
| CDS TCA 90 bp | TGTCAGCAAGAGGAAAGCCTCTTCCATCGTTCGGGTAATAAACAGTaGTCTCCTCTGAATCAAGGATGCTCACCACAGCCTTTTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQQEESLFHRSGNKQ*SPLNQGCSPQPFWF Trigger: AAACCAAAAAGGCTGTGGTGAGCATCCTTGATTCAGAGGAGATCACTGTTTATTACCCGAACGATGGAAGAGGCTTTCCTCTTGCTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203295.3 |
||
| CDS TCA 90 bp | AGGAAAGCCTCTTCCATCGTTCGGGTAATAAACAGTGATCTCCTCTaGATCAAGGATGCTCACCACAGCCTTTTTGGTTTTCTGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RKASSIVRVINSDLL*IKDAHHSLFGFLSD Trigger: ATCAGACAGAAAACCAAAAAGGCTGTGGTGAGCATCCTTGATTCAGAGGAGATCACTGTTTATTACCCGAACGATGGAAGAGGCTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203295.3 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTCATGCCCACTATCCATaGAGTCCTCTACAGTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTHAHYP*SPLQSL Trigger: TAGGGACTGTAGAGGACTCAATGGATAGTGGGCATG...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | GTCAGCAAGAGGAAAGCCTCTTCCATCGTTCGGGTAATAAACAGTGATCATAGTTGTACCATTCCAGCTTaGTACATGGCTTTCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: VSKRKASSIVRVINSDHSCTIPA*YMAFLS Trigger: AGATAAGAAAGCCATGTACAAAGCTGGAATGGTACA...ACTATGATCACTGTTTATTACCCGAACGATGGAAGAGGCTTTCCTCTTGCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203895.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCTCACCACAGCCTTTTaGGTTTTCTGTCTGATTGGC | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTLTTAF*VFCLIG Trigger: GCCAATCAGACAGAAAACCAAAAAGGCTGTGGTGAG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGAGAAGTATCAGCATTCTaGCTGGCTCTCGTGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIREVSAF*LALVSV Trigger: GACTGACACGAGAGCCAGCAAGAATGCTGATACTTC...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCTACGTCTTTACTCTTaGGTGAAGGATTTCGTGACA | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTLRLYS*VKDFVT Trigger: TGTCACGAAATCCTTCACCAAAGAGTAAAGACGTAG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCCTACTATTAGCTTCTaGTTCTGGATTTCCCCATTG | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTPTISF*FWISPL Trigger: CAATGGGGAAATCCAGAACAAGAAGCTAATAGTAGG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTACCTACTATTAGCTTCTaGTTCTGGATTTCCCCATTG | + |
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Preference number: 5 (lower is better) Translates to: AQTLKDYMLGAKLDVLALPTISF*FWISPL Trigger: CAATGGGGAAATCCAGAACAAGAAGCTAATAGTAGG...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCTGTACCATTCCAGCTTaGTACATGGCTTTCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTCTIPA*YMAFLS Trigger: AGATAAGAAAGCCATGTACAAAGCTGGAATGGTACA...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCCATGTGCACTTCGAGTaGCAATTTCTGGTGAAATAT | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTHVHFE*QFLVKY Trigger: ATATTTCACCAGAAATTGCAACTCGAAGTGCACATG...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTACATGTGCACTTCGAGTaGCAATTTCTGGTGAAATAT | + |
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Preference number: 5 (lower is better) Translates to: AQTLKDYMLGAKLDVLALHVHFE*QFLVKY Trigger: ATATTTCACCAGAAATTGCAACTCGAAGTGCACATG...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | GCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATTGTTCAATGTGTTCTaGACTGTGTCAGTGTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: AQTLKDYMLGAKLDVLALLFNVF*TVSVSK Trigger: TTTTGACACTGACACAGTCAAGAACACATTGAACAA...TAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATCTGCCAGGACTACTTaGTTCAATGTGTTCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRSARTT*FNVFLT Trigger: AGTCAAGAACACATTGAACAAAGTAGTCCTGGCAGA...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTCTGCCAGGACTACTTaGTTCAATGTGTTCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: QYKHRSTNFEGLHAWSKISARTT*FNVFLT Trigger: AGTCAAGAACACATTGAACAAAGTAGTCCTGGCAGA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGACTACGTCTTTACTCTTaGGTGAAGGATTTCGTGACA | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRLRLYS*VKDFVT Trigger: TGTCACGAAATCCTTCACCAAAGAGTAAAGACGTAG...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTTTTATTTGGAAGTGGTaGACCAACCAAAAGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTFIWKW*TNQKSS Trigger: AGAAGACTTTTGGTTGGTCAACCACTTCCAAATAAA...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCACTTTCTGGATTTCCCCATaGAGTACAAAAATTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: FEGLHAWSKIRCPSLMTTFWISP*STKITS Trigger: GGAAGTAATTTTTGTACTCAATGGGGAAATCCAGAA...AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | AACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTCCTAGCCTTATGACCTATTTTTCTGGTAGATaGTCAAAGCTGTACCTACTG | + |
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Preference number: 5 (lower is better) Translates to: NFEGLHAWSKIRCPSLMTYFSGR*SKLYLL Trigger: CAGTAGGTACAGCTTTGACAATCTACCAGAAAAATA...GGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATGTACCATTCCAGCTTaGTACATGGCTTTCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRCTIPA*YMAFLS Trigger: AGATAAGAAAGCCATGTACAAAGCTGGAATGGTACA...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 ENSMUST00000203895.3 |
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| CDS-3UTR CAA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTTGTTCAATGTGTTCTaGACTGTGTCAGTGTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: QYKHRSTNFEGLHAWSKILFNVF*TVSVSK Trigger: TTTTGACACTGACACAGTCAAGAACACATTGAACAA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATTTATTTGGAAGTGGTaGACCAACCAAAAGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRFIWKW*TNQKSS Trigger: AGAAGACTTTTGGTTGGTCAACCACTTCCAAATAAA...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | TACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTAGATTCTGGATTTCCCCATaGAGTACAAAAATTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: YKHRSTNFEGLHAWSKIRFWISP*STKITS Trigger: GGAAGTAATTTTTGTACTCAATGGGGAAATCCAGAA...TCTAATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS-3UTR CAA 90 bp | CAATACAAACATAGGAGCACAAACTTTGAAGGATTACATGCTTGGAGCAAAATTTATTTTTCTGGTAGATaGTCAAAGCTGTACCTACTG | + |
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Preference number: 5 (lower is better) Translates to: QYKHRSTNFEGLHAWSKIYFSGR*SKLYLL Trigger: CAGTAGGTACAGCTTTGACAATCTACCAGAAAAATA...AATTTTGCTCCAAGCATGTAATCCTTCAAAGTTTGTGCTCCTATGTTTGTATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026858.11 ENSMUST00000203295.3 |
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| CDS TCA 72 bp | GAGGAAAGCCTCTTCCATCGTTCGGGTAATAAACAGTaGTCTCCTCTGAATCAAGGATGCTCACCACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EESLFHRSGNKQ*SPLNQGCSPQP Trigger: AGGCTGTGGTGAGCATCCTTGATTCAGAGGAGATCACTGTTTATTACCCGAACGATGGAAGAGGCTTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203295.3 |
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| CDS CAA 90 bp | TCTGTTTGGGCTAACGGTGTGGTGCTCATTAGTTTCTCCATTCATTaGCAGATTCCCAAACCACTGCTGTACCATTTCCATCTGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SVWANGVVLISFSIH*QIPKPLLYHFHLRC Trigger: ACACCTCAGATGGAAATGGTACAGCAGTGGTTTGGGAATCTGCAAATGAATGGAGAAACTAATGAGCACCACACCGTTAGCCCAAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167556.7 |
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| CDS CCA 72 bp | GTCCTGCAAATCTGGATAGTCCTGGAAATCTCTGTTTaGGCTAACGGTGTGGTGCTCATTAGTTTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: VLQIWIVLEISV*ANGVVLISFSI Trigger: AATGGAGAAACTAATGAGCACCACACCGTTAGCCCAAACAGAGATTTCCAGGACTATCCAGATTTGCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167556.7 |
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| CDS CAA 72 bp | GCTAACGGTGTGGTGCTCATTAGTTTCTCCATTCATTaGCAGATTCCCAAACCACTGCTGTACCATTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ANGVVLISFSIH*QIPKPLLYHFH Trigger: ATGGAAATGGTACAGCAGTGGTTTGGGAATCTGCAAATGAATGGAGAAACTAATGAGCACCACACCGTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167556.7 |
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| CDS TCA 72 bp | TCTTCCATCGTTCGGGTAATAAACAGTGATCTCCTCTaGATCAAGGATGCTCACCACAGCCTTTTTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSIVRVINSDLL*IKDAHHSLFGF Trigger: AAAACCAAAAAGGCTGTGGTGAGCATCCTTGATTCAGAGGAGATCACTGTTTATTACCCGAACGATGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203295.3 |
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| CDS GCA 72 bp | AGATATAACATTCCTGTGATAATCTGGTGCATGAAGTaGCTAGCTTCCCTTTCTGAGAAAGGCTTCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: RYNIPVIIWCMK*LASLSEKGFIL Trigger: CAGAATGAAGCCTTTCTCAGAAAGGGAAGCTAGGCACTTCATGCACCAGATTATCACAGGAATGTTATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026858.11 ENSMUST00000167556.7 ENSMUST00000203295.3 |
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