Pregenerated sensors for PLK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028680Ensembl transcript IDs: ENSMUST00000076859.12, ENSMUST00000147730.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGGCCAGGAGCCCCCAGTaGGGCACCAAAGGGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRLISERRVRFREGRPSPARSPQ*GTKGTG Trigger: TCCTGTCCCTTTGGTGCCTCACTGGGGGCTCCTGGC...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACAAAGGCAAGGCCCTaGAGCCTTTCAGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LRLISERRVRFREGRPSPTKARP*SLSGSG Trigger: GCCTGAGCCTGAAAGGCTTCAGGGCCTTGCCTTTGT...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTACAAAGGCAAGGCCCTaGAGCCTTTCAGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RVRFREGRPSPTVVKLVPTKARP*SLSGSG Trigger: GCCTGAGCCTGAAAGGCTTCAGGGCCTTGCCTTTGT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGCGCAGGATGCCCAGCTaGGGCTGCAGAGCTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPRRMPS*GCRARG Trigger: GCCCCGAGCTCTGCAGCCTCAGCTGGGCATCCTGCG...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCGCAGGATGCCCAGCTaGGGCTGCAGAGCTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPRRMPS*GCRARG Trigger: GCCCCGAGCTCTGCAGCCTCAGCTGGGCATCCTGCG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAACAGAGGCTCTGGCTGTaGCAGCGGGGCTGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEQRLWL*QRGWVL Trigger: CAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTG...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAAGGATCTTCTCGCGCTaGTGCGGCTTGGCGACGCGA | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELERIFSR*CGLATR Trigger: TCGCGTCGCCAAGCCGCATCAGCGCGAGAAGATCCT...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGGCAGGGGCCTGGCCTaGAACTACAGGAGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPGRGLA*NYRSLR Trigger: CCGGAGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
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| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCTGCAGCAGCAAGGGTaGGGCAGGCACCTCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPLQQQG*GRHLRL Trigger: GAGGCGGAGGTGCCTGCCCCACCCTTGCTGCTGCAG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAGAGGCTCCCAGCCACTaGGGATCAGCTTCGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEEAPSH*GSASCG Trigger: ACCACACGAAGCTGATCCTCAGTGGCTGGGAGCCTC...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCAGGGCTTTGGTCCCTaGGCAGGCGCAGAGCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPQGFGP*AGAERS Trigger: GCTACGCTCTGCGCCTGCTCAGGGACCAAAGCCCTG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCAGAGGCTCTGGCTGTaGCAGCGGGGCTGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPQRLWL*QRGWVL Trigger: CAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAACGGCTACACGGCGGCTaGACAGCTGATAGCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELERLHGG*TADSQS Trigger: GCTTTGGCTATCAGCTGTCCAGCCGCCGTGTAGCCG...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCTGCAGCAGCAAGGGTaGGGCAGGCACCTCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCLQQQG*GRHLRL Trigger: GAGGCGGAGGTGCCTGCCCCACCCTTGCTGCTGCAG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGAGGATCTTCTCGCGCTaGTGCGGCTTGGCGACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPRIFSR*CGLATR Trigger: TCGCGTCGCCAAGCCGCATCAGCGCGAGAAGATCCT...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCAGGGCTTTGGTCCCTaGGCAGGCGCAGAGCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCQGFGP*AGAERS Trigger: GCTACGCTCTGCGCCTGCTCAGGGACCAAAGCCCTG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGGCAGGGGCCTGGCCTaGAACTACAGGAGCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPGRGLA*NYRSQA Trigger: TGCTTGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAGGCGACGCGACTCTGTaGGATGACTTTGACCGCGTA | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEGDATL*DDFDRV Trigger: TACGCGGTCAAAGTCATCCCACAGAGTCGCGTCGCC...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCGCGCTGATGCGGCTTaGCGACGCGACTCTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRADAA*RRDSVG Trigger: TCCCACAGAGTCGCGTCGCCAAGCCGCATCAGCGCG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCGCGCTGATGCGGCTTaGCGACGCGACTCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVRADAA*RRDSVG Trigger: TCCCACAGAGTCGCGTCGCCAAGCCGCATCAGCGCG...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTCTGCCTCGGGGCCATaGCCCTGTCTCAGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPSASGP*PCLSST Trigger: AGTGCTGCTGAGACAGGGCCATGGCCCCGAGGCAGA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCACCCATCTCCACTGCTaGCCAGTGTCCCACGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVTHLHC*PVSHGA Trigger: CGCCCCGTGGGACACTGGCCAGCAGTGGAGATGGGT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAATGGGTTCTGTTCGGCTaGGGGCATGAAGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEWVLFG*GHEGHT Trigger: TGTGTGGCCTTCATGCCCCCAGCCGAACAGAACCCA...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGGAGGCTCCCAGCCACTaGGGATCAGCTTCGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPEAPSH*GSASCG Trigger: ACCACACGAAGCTGATCCTCAGTGGCTGGGAGCCTC...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAGGTAAGTACAAGCACTaGGATTGCGGGCCACGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEGKYKH*DCGPRR Trigger: CCTTCGTGGCCCGCAATCGCAGTGCTTGTACTTACC...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTCTGCCTCGGGGCCATaGCCCTGTCTCAGCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVSASGP*PCLSST Trigger: AGTGCTGCTGAGACAGGGCCATGGCCCCGAGGCAGA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGACTCCTCGCAGGGTTaGGGGGTGTCAGATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPDSSQG*GVSDLG Trigger: TCCCAGATCTGACACCCCCCAACCCTGCGAGGAGTC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAGCACCGTCTTCCTATTaGCTGACAGGGCCATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEAPSSY*LTGPCV Trigger: CACACATGGCCCTGTCAGCCAATAGGAAGACGGTGC...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAATCTGGTGCAAGTACTTaGGGCCAGAAAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELESGAST*GQKGSG Trigger: GCCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGA...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCGATGGATGTGCGCATaGGGCCACTCACCAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRWMCA*GHSPSR Trigger: CCTGCTTGGTGAGTGGCCTCATGCGCACATCCATCG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
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| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTAGTCAACCCACTTGCTaGCCCACACCAGAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPSQPTC*PTPEAL Trigger: CAGAGCCTCTGGTGTGGGTCAGCAAGTGGGTTGACT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGCGTCTTCCTATTGGCTaGCAGGGCCATGTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPRLPIG*QGHVCA Trigger: GGCACACACATGGCCCTGTCAGCCAATAGGAAGACG...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAAGGAGAAGTGCTTCGTaGTGGTGGGGTTGTAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELERRSAS*WWGCSA Trigger: TGCACTACAACCCCACCAGCACGAAGCACTTCTCCT...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTCAGTCTTGACCCACTaGAGCAGCAAGGGTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPSVLTH*SSKGGA Trigger: TGCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGGCGACGCGACTCTGTaGGATGACTTTGACCGCGTA | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPGDATL*DDFDRV Trigger: TACGCGGTCAAAGTCATCCCACAGAGTCGCGTCGCC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCGGGCCTTCCAGATGTaGGCCAGGGACTTTCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRAFQM*ARDFRL Trigger: TAGCCGAAAGTCCCTGGCCCACATCTGGAAGGCCCG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAATCTCAGCAGCACTTCTaGAGCCACGTAGTTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELESQQHF*SHVVGS Trigger: ACTCCCAACTACGTGGCTCCAGAAGTGCTGCTGAGA...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCGACTCCTCGCAGGGTTaGGGGGTGTCAGATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVDSSQG*GVSDLG Trigger: TCCCAGATCTGACACCCCCCAACCCTGCGAGGAGTC...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAAGCTGGCAGGGGCCTaGCCTGAAACTACAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCKLAGA*PETTGA Trigger: GGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCAAGCTGGCAGGGGCCTaGCCTGAAACTACAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVKLAGA*PETTGA Trigger: GGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCTGTCTCTACCAAGCTaGCAGGGGCCTGGCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPLSLPS*QGPGLK Trigger: TTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCGGCTACACGGCGGCTaGACAGCTGATAGCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVRLHGG*TADSQS Trigger: GCTTTGGCTATCAGCTGTCCAGCCGCCGTGTAGCCG...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCGGCCTGACATCTGGATaGCCGATGGATGTGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVGLTSG*PMDVRM Trigger: CATGCGCACATCCATCGGTCATCCAGATGTCAGGCC...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
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| CDS-3UTR TCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCAGTCAACCCACTTGCTaGCCCACACCAGAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVSQPTC*PTPEAL Trigger: CAGAGCCTCTGGTGTGGGTCAGCAAGTGGGTTGACT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTTGTGTGTGCCATCATTaGAGAGCACGGCTACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPCVCHH*RARLHG Trigger: GCCGTGTAGCCGTGCTCTTCAATGATGGCACACACA...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTGTGTGTGCCATCATTaGAGAGCACGGCTACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPCVCHH*RARLHG Trigger: GCCGTGTAGCCGTGCTCTTCAATGATGGCACACACA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCGTCTTCCTATTGGCTaGCAGGGCCATGTGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRLPIG*QGHVCA Trigger: GGCACACACATGGCCCTGTCAGCCAATAGGAAGACG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCGAACGATATGGCGGTaGTGTAGGTCTCGGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPRTIWR*CRSRCN Trigger: GTTGCACCGAGACCTACAGCACCGCCATATCGTTCG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAACACACAGTTTCTCAGTaGACAGAGGGCAGACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEHTVSQ*TEGRLY Trigger: GTAGAGTCTGCCCTCTGTGCACTGAGAAACTGTGTG...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTTCAGTCTTGACCCACTaGAGCAGCAAGGGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCSVLTH*SSKGGA Trigger: TGCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGA...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCTGTCTCTACCAAGCTaGCAGGGGCCTGGCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCLSLPS*QGPGLK Trigger: TTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTAGTGCTTCGTGCTGGTaGGGTTGTAGTGCACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPSASCW*GCSAPS Trigger: AGACGGTGCACTACAACCCCACCAGCACGAAGCACT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTAGAAGTGCTTCGTGCTaGTGGGGTTGTAGTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPRSASC*WGCSAP Trigger: CGGTGCACTACAACCCCACCAGCACGAAGCACTTCT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCCGCCTCTTCCACACTaGGCAGATCTCCACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCPPLPH*ADLHPS Trigger: TGAAGGGTGGAGATCTGCCCAGTGTGGAAGAGGCGG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCGCCTCTTCCACACTaGGCAGATCTCCACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVPPLPH*ADLHPS Trigger: TGAAGGGTGGAGATCTGCCCAGTGTGGAAGAGGCGG...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGCATGAGGAGGGCCTaGTCAGTCTTGACCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCSMRRA*SVLTHC Trigger: GCAGTGGGTCAAGACTGACCAGGCCCTCCTCATGCT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCGAACGATATGGCGGTaGTGTAGGTCTCGGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVRTIWR*CRSRCN Trigger: GTTGCACCGAGACCTACAGCACCGCCATATCGTTCG...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTATGGAGAAGGAGAAGTaGTTCGTGCTGGTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPMEKEK*FVLVGL Trigger: CAACCCCACCAGCACGAAGCACTTCTCCTTCTCCAT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCAAAATACCGCAGGATaGCCAGCTGAGGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCQNTAG*PAEAAE Trigger: CTCTGCAGCCTCAGCTGGGCATCCTGCGGTATTTTG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTACAAGCACTGCGATTaGGGGCCACGAAGGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPYKHCD*GPRRSQ Trigger: TTGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTGGTAAGTACAAGCACTaGGATTGCGGGCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCGKYKH*DCGPRR Trigger: CCTTCGTGGCCCGCAATCGCAGTGCTTGTACTTACC...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGTAGTAGCGAACCTCTaGTTCCAACAGGGTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPVVANL*FQQGVS Trigger: CGACACACCCTGTTGGAACCAGAGGTTCGCTACTAC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAATGTAAGATACCCCTCTaGTGCAAGTACTTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELECKIPL*CKYLRP Trigger: TGGCCTCAAGTACTTGCACCAGAGGGGTATCTTACA...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTGCTTCGTGCTGGTaGGGTTGTAGTGCACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCSASCW*GCSAPS Trigger: AGACGGTGCACTACAACCCCACCAGCACGAAGCACT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTCTGGTGCAAGTACTTaGGGCCAGAAAGGATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVSGAST*GQKGSG Trigger: GCCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGGAGAAGTGCTTCGTaGTGGTGGGGTTGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRRSAS*WWGCSA Trigger: TGCACTACAACCCCACCAGCACGAAGCACTTCTCCT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCATGGAGAAGGAGAAGTaGTTCGTGCTGGTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVMEKEK*FVLVGL Trigger: CAACCCCACCAGCACGAAGCACTTCTCCTTCTCCAT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTACAAGCACTGCGATTaGGGGCCACGAAGGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVYKHCD*GPRRSQ Trigger: TTGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTGTAGTAGCGAACCTCTaGTTCCAACAGGGTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCVVANL*FQQGVS Trigger: CGACACACCCTGTTGGAACCAGAGGTTCGCTACTAC...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTGGGAGTGCCACAGATaGTCTTTTTCCTCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPWECHR*SFSSAL Trigger: CAGAGCAGAGGAAAAAGACCATCTGTGGCACTCCCA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTCTCAGCAGCACTTCTaGAGCCACGTAGTTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVSQQHF*SHVVGS Trigger: ACTCCCAACTACGTGGCTCCAGAAGTGCTGCTGAGA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTAAGATACCCCTCTGGTaGAAGTACTTGAGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPKIPLW*KYLRPE Trigger: TTCTGGCCTCAAGTACTTGCACCAGAGGGGTATCTT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTATGGTCTTTTTCCTCTaGTCTGGGGGCTCTAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPMVFFL*SGGSNR Trigger: TCGATTAGAGCCCCCAGAGCAGAGGAAAAAGACCAT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCCACGTAGTTGGGAGTaGCACAGATGGTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCPRSWE*HRWSFS Trigger: GGAAAAAGACCATCTGTGGCACTCCCAACTACGTGG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCACGTAGTTGGGAGTaGCACAGATGGTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVPRSWE*HRWSFS Trigger: GGAAAAAGACCATCTGTGGCACTCCCAACTACGTGG...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCACACAGTTTCTCAGTaGACAGAGGGCAGACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCHTVSQ*TEGRLY Trigger: GTAGAGTCTGCCCTCTGTGCACTGAGAAACTGTGTG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTGTAATGAACCTGCTTaGTGCAGCGGTATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVCNEPA*CSGMSP Trigger: AGGAGACATACCGCTGCATCAAGCAGGTTCATTACA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTGCTGTAGGTCTCGGTaGAACTCTATCTCATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPCCRSR*NSISFR Trigger: CCTAAATGAGATAGAGTTGCACCGAGACCTACAGCA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTATGGTCTTTTTCCTCTaGTCTGGGGGCTCTAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCMVFFL*SGGSNR Trigger: TCGATTAGAGCCCCCAGAGCAGAGGAAAAAGACCAT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTTGTAAGATACCCCTCTaGTGCAAGTACTTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCCKIPL*CKYLRP Trigger: TGGCCTCAAGTACTTGCACCAGAGGGGTATCTTACA...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR GCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTTGCTGTAGGTCTCGGTaGAACTCTATCTCATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCCCRSR*NSISFR Trigger: CCTAAATGAGATAGAGTTGCACCGAGACCTACAGCA...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAATTCGTAAAGAAGTCATaGCGTAAAATCTGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AFQAQAQDLDHSPLSELEFVKKS*RKICSM Trigger: CATTGAACAGATTTTACGCCATGACTTCTTTACGAA...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGTCCTGGTCCTCAGAATaGTTCTTATTCTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLISERRVRFREGRPSPSWSSE*FLFLFF Trigger: AAAGAACAAGAATAAGAACCATTCTGAGGACCAGGA...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCAAAAATTTCCCAGCTTaGGATCTCTGTGTAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRFREGRPSPTVVKLVKNFPA*DLCVRY Trigger: GTATCTTACACAGAGATCTCAAGCTGGGAAATTTTT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTTTCGTAAAGAAGTCATaGCGTAAAATCTGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RVRFREGRPSPTVVKLVPFVKKS*RKICSM Trigger: CATTGAACAGATTTTACGCCATGACTTCTTTACGAA...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTTCCTGGTCCTCAGAATaGTTCTTATTCTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AYLREKGKIQGGQAIPDCSWSSE*FLFLFF Trigger: AAAGAACAAGAATAAGAACCATTCTGAGGACCAGGA...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | GCTGAGAGGGTCGGTGATGAGGCGACCAGGAGGATCCGGCGCCCGTaGCCCGGCCAGCACCTCAGGTTCCGATCGCGGGGAGGCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AERVGDEATRRIRRP*PGQHLRFRSRGGIG Trigger: GCCAATGCCTCCCCGCGATCGGAACCTGAGGTGCTGGCCGGGCCACGGGCGCCGGATCCTCCTGGTCGCCTCATCACCGACCCTCTCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | GTCCCTGAGCAGGCGCAGAGCGTAGCGCAGTCGCTGCCGCAAGTCTaGGGAGCAGCCCAGCTGCCGGAGGTGGGAAGCGAGGTAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: VPEQAQSVAQSLPQV*GAAQLPEVGSEVST Trigger: TGTACTTACCTCGCTTCCCACCTCCGGCAGCTGGGCTGCTCCCCAGACTTGCGGCAGCGACTGCGCTACGCTCTGCGCCTGCTCAGGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS GCA 90 bp | GGAGTAGTCAACCCACTTGCTGACCCACACCAGAGGCTCTGGCTGTaGCAGCGGGGCTGGGTTCTGTTCGGCTGGGGGCATGAAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GVVNPLADPHQRLWL*QRGWVLFGWGHEGH Trigger: GTGGCCTTCATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTGGTGTGGGTCAGCAAGTGGGTTGACTACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | CATGAGGAGGGCCTGGTCAGTCTTGACCCACTGCAGCAGCAAGGGTaGGGCAGGCACCTCCGCCTCTTCCACACTGGGCAGATCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HEEGLVSLDPLQQQG*GRHLRLFHTGQIST Trigger: GGTGGAGATCTGCCCAGTGTGGAAGAGGCGGAGGTGCCTGCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCCCTCCTCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS GCA 90 bp | AGCAGCCCAGCTGCCGGAGGTGGGAAGCGAGGTAAGTACAAGCACTaGGATTGCGGGCCACGAAGGTCACAAGGAGAGGCTCCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPAAGGGKRGKYKH*DCGPRRSQGEAPSH Trigger: GTGGCTGGGAGCCTCTCCTTGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTACTTACCTCGCTTCCCACCTCCGGCAGCTGGGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 90 bp | GCTGTCCTCGGCAGCTGTCTCTACCAAGCTGGCAGGGGCCTGGCCTaGAACTACAGGAGCCTCCGGCCTGACATCTGGATGACCGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLGSCLYQAGRGLA*NYRSLRPDIWMTDG Trigger: TCCATCGGTCATCCAGATGTCAGGCCGGAGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAGCTGCCGAGGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
||
| CDS TCA 90 bp | GCTCTGGCTGTGCCAGCGGGGCTGGGTTCTGTTCGGCTGGGGGCATaGAGGCCACACAGTTTCTCAGTGCACAGAGGGCAGACTCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: ALAVPAGLGSVRLGA*RPHSFSVHRGQTLP Trigger: TGGTAGAGTCTGCCCTCTGTGCACTGAGAAACTGTGTGGCCTTCATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 90 bp | GGGGCCTGGCCTGAAACTACAGGAGCCTCCGGCCTGACATCTGGATaGCCGATGGATGTGCGCATGAGGCCACTCACCAAGCAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GAWPETTGASGLTSG*PMDVRMRPLTKQET Trigger: TGTCTCCTGCTTGGTGAGTGGCCTCATGCGCACATCCATCGGTCATCCAGATGTCAGGCCGGAGGCTCCTGTAGTTTCAGGCCAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
||
| CDS TCA 90 bp | TGCGATTGCGGGCCACGAAGGTCACAAGGAGAGGCTCCCAGCCACTaGGGATCAGCTTCGTGTGGTCCCCGTAGAAGTTCACCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CDCGPRRSQGEAPSH*GSASCGPRRSSPGQ Trigger: CTGTCCAGGTGAACTTCTACGGGGACCACACGAAGCTGATCCTCAGTGGCTGGGAGCCTCTCCTTGTGACCTTCGTGGCCCGCAATCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | AAGTTCACCTGGACAGTGCCATCACTGAACAGCATGAGGAGGGCCTaGTCAGTCTTGACCCACTGCAGCAGCAAGGGTGGGGCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KFTWTVPSLNSMRRA*SVLTHCSSKGGAGT Trigger: GGTGCCTGCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCCCTCCTCATGCTGTTCAGTGATGGCACTGTCCAGGTGAACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAGTACAAGCACTGCGATaGCGGGCCACGAAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AFQAQAQDLDHSPLSELEVQALR*RATKVT Trigger: TGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTAC...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS GCA 90 bp | GCAGAGCTCGGGGCACAGAACCCATGGAGAAGGAGAAGTGCTTCGTaGTGGTGGGGTTGTAGTGCACCGTCTTCCTATTGGCTGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AELGAQNPWRRRSAS*WWGCSAPSSYWLTG Trigger: CCCTGTCAGCCAATAGGAAGACGGTGCACTACAACCCCACCAGCACGAAGCACTTCTCCTTCTCCATGGGTTCTGTGCCCCGAGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | CCACACATCTGCCTCGGGGCCATGGCCCTGTCTCAGCAGCACTTCTaGAGCCACGTAGTTGGGAGTGCCACAGATGGTCTTTTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHICLGAMALSQQHF*SHVVGSATDGLFPL Trigger: CAGAGGAAAAAGACCATCTGTGGCACTCCCAACTACGTGGCTCCAGAAGTGCTGCTGAGACAGGGCCATGGCCCCGAGGCAGATGTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTAGGGCCTGGTCAGTCTaGACCCACTGCAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRFREGRPSPTVVKLVPRAWSV*THCSSK Trigger: CTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCCCT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 90 bp | GCACCGTCTTCCTATTGGCTGACAGGGCCATGTGTGTGCCATCATTaGAGAGCACGGCTACACGGCGGCTGGACAGCTGATAGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: APSSYWLTGPCVCHH*RARLHGGWTADSQS Trigger: GCTTTGGCTATCAGCTGTCCAGCCGCCGTGTAGCCGTGCTCTTCAATGATGGCACACACATGGCCCTGTCAGCCAATAGGAAGACGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAAATGTGTGTGCCATCATaGAAGAGCACGGCTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: AFQAQAQDLDHSPLSELEMCVPS*KSTATR Trigger: CCGTGTAGCCGTGCTCTTCAATGATGGCACACACAT...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCAGGGCCTGGTCAGTCTaGACCCACTGCAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRVRFREGRPSPTVVKLVRAWSV*THCSSK Trigger: CTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCCCT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGGTACAAGCACTGCGATaGCGGGCCACGAAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRLISERRVRFREGRPSPVQALR*RATKVT Trigger: TGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTAC...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS GCA 90 bp | CATGGCCCTGTCTCAGCAGCACTTCTGGAGCCACGTAGTTGGGAGTaGCACAGATGGTCTTTTTCCTCTGCTCTGGGGGCTCTAATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: HGPVSAALLEPRSWE*HRWSFSSALGALIE Trigger: CTCGATTAGAGCCCCCAGAGCAGAGGAAAAAGACCATCTGTGGCACTCCCAACTACGTGGCTCCAGAAGTGCTGCTGAGACAGGGCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 90 bp | CTGCTTGATGCAGCGGTATGTCTCCTTCAGGTCAGCAGTCTCAAATaGGGGGCTCCCACACAGGAGCGTGTACATGACACAACCAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLDAAVCLLQVSSLK*GAPTQERVHDTTKR Trigger: TCGCTTGGTTGTGTCATGTACACGCTCCTGTGTGGGAGCCCCCCATTTGAGACTGCTGACCTGAAGGAGACATACCGCTGCATCAAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTCTCTGGTGCAAGTACTaGAGGCCAGAAAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVRFREGRPSPTVVKLVPLWCKY*RPERIW Trigger: CCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGAG...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCAGGCTCAGGCCCAGGATCTGGATCACAGCCCGCTCTCCGAGTTGGAACTGCCAAACAGGCTCTaGGTAACTTTGGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AFQAQAQDLDHSPLSELELPNRL*VTLANR Trigger: TCTGTTTGCCAAAGTTACCAAGAGCCTGTTTGGCAG...TTCCAACTCGGAGAGCGGGCTGTGATCCAGATCCTGGGCCTGAGCCTGAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTATGTGTGTGCCATCATaGAAGAGCACGGCTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RVRFREGRPSPTVVKLVPMCVPS*KSTATR Trigger: CCGTGTAGCCGTGCTCTTCAATGATGGCACACACAT...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCTGCACCGTCTTCCTATaGGCTGACAGGGCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRVRFREGRPSPTVVKLVCTVFL*ADRAMC Trigger: ACACATGGCCCTGTCAGCCAATAGGAAGACGGTGCA...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTTGCACCGTCTTCCTATaGGCTGACAGGGCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AYLREKGKIQGGQAIPDCCTVFL*ADRAMC Trigger: ACACATGGCCCTGTCAGCCAATAGGAAGACGGTGCA...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGGCTCTTGGTAACTTaGGCAAACAGACTCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AYLREKGKIQGGQAIPDCRLLVT*ANRLLA Trigger: TGCGAGGAGTCTGTTTGCCAAAGTTACCAAGAGCCT...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCAGGCTCTTGGTAACTTaGGCAAACAGACTCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRVRFREGRPSPTVVKLVRLLVT*ANRLLA Trigger: TGCGAGGAGTCTGTTTGCCAAAGTTACCAAGAGCCT...GACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | GCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTCTGCCAAACAGGCTCTaGGTAACTTTGGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AYLREKGKIQGGQAIPDCLPNRL*VTLANR Trigger: TCTGTTTGCCAAAGTTACCAAGAGCCTGTTTGGCAG...ACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGACTGTAGTAAAGCTGGTCCCTGAATGGTTCTTATTCTaGTTCTTTTTCCTGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RVRFREGRPSPTVVKLVPEWFLF*FFFLPN Trigger: GTTTGGCAGGAAAAAGAACAAGAATAAGAACCATTC...AGGGACCAGCTTTACTACAGTCGGGGATGGCCTGCCCTCCCTGAATCTTACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGCTTATCTCAGAGAGAAGGGTAAGATTCAGGGAGGGCAGGCCATCCCCGGAATGGTTCTTATTCTaGTTCTTTTTCCTGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRLISERRVRFREGRPSPEWFLF*FFFLPN Trigger: GTTTGGCAGGAAAAAGAACAAGAATAAGAACCATTC...CGGGGATGGCCTGCCCTCCCTGAATCTTACCCTTCTCTCTGAGATAAGCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 90 bp | CTACAGAGCTCCAGGAAAATGTATATGTTGTCAGCATCCTCGAAATaGTGTGAAAAGCGAACGATATGGCGGTGCTGTAGGTCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSSRKMYMLSASSK*CEKRTIWRCCRSRC Trigger: GCACCGAGACCTACAGCACCGCCATATCGTTCGCTTTTCACATCATTTCGAGGATGCTGACAACATATACATTTTCCTGGAGCTCTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GTCGGTGATGAGGCGACCAGGAGGATCCGGCGCCCGTaGCCCGGCCAGCACCTCAGGTTCCGATCGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VGDEATRRIRRP*PGQHLRFRSRG Trigger: TCCCCGCGATCGGAACCTGAGGTGCTGGCCGGGCCACGGGCGCCGGATCCTCCTGGTCGCCTCATCACCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GGGGCGAGCTGTCCTCGGCAGCTGTCTCTACCAAGCTaGCAGGGGCCTGGCCTGAAACTACAGGAGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GASCPRQLSLPS*QGPGLKLQEPP Trigger: CGGAGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAGCTGCCGAGGACAGCTCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
||
| CDS CCA 72 bp | GACCCACACCAGAGGCTCTGGCTGTGCCAGCGGGGCTaGGTTCTGTTCGGCTGGGGGCATGAAGGCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: DPHQRLWLCQRG*VLFGWGHEGHT Trigger: TGTGTGGCCTTCATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTGGTGTGGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GGCCTGGTCAGTCTTGACCCACTGCAGCAGCAAGGGTaGGGCAGGCACCTCCGCCTCTTCCACACTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLVSLDPLQQQG*GRHLRLFHTGQ Trigger: CTGCCCAGTGTGGAAGAGGCGGAGGTGCCTGCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS GCA 72 bp | AACCCACTTGCTGACCCACACCAGAGGCTCTGGCTGTaGCAGCGGGGCTGGGTTCTGTTCGGCTGGGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NPLADPHQRLWL*QRGWVLFGWGH Trigger: ATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTGGTGTGGGTCAGCAAGTGGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GGGGCGAGCTGTCCTCGGCAGCTGTCTCTACCAAGCTaGCAGGGGCCTGGCCTGAAACTACAGGAGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GASCPRQLSLPS*QGPGLKLQEPS Trigger: GCTTGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAGCTGCCGAGGACAGCTCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147730.2 |
||
| CDS TCA 72 bp | GTGCCAGCGGGGCTGGGTTCTGTTCGGCTGGGGGCATaGAGGCCACACAGTTTCTCAGTGCACAGAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPAGLGSVRLGA*RPHSFSVHRGQ Trigger: CTGCCCTCTGTGCACTGAGAAACTGTGTGGCCTTCATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GTAGTCAACCCACTTGCTGACCCACACCAGAGGCTCTaGCTGTGCCAGCGGGGCTGGGTTCTGTTCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVNPLADPHQRL*LCQRGWVLFGW Trigger: CCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTGGTGTGGGTCAGCAAGTGGGTTGACTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 72 bp | GGCAGCTGTCTCTACCAAGCTGGCAGGGGCCTGGCCTaGAACTACAGGAGCCTCCGGCCTGACATCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSCLYQAGRGLA*NYRSLRPDIWM Trigger: CATCCAGATGTCAGGCCGGAGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
||
| CDS CCA 72 bp | TCCTCGGCAGCTGTCTCTACCAAGCTGGCAGGGGCCTaGCCTGAAACTACAGGAGCCTCCGGCCTGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAAVSTKLAGA*PETTGASGLTS Trigger: AGATGTCAGGCCGGAGGCTCCTGTAGTTTCAGGCCAGGCCCCTGCCAGCTTGGTAGAGACAGCTGCCGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076859.12 |
||
| CDS GCA 72 bp | GCTGCCGGAGGTGGGAAGCGAGGTAAGTACAAGCACTaGGATTGCGGGCCACGAAGGTCACAAGGAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGGGKRGKYKH*DCGPRRSQGEA Trigger: AGCCTCTCCTTGTGACCTTCGTGGCCCGCAATCGCAGTGCTTGTACTTACCTCGCTTCCCACCTCCGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | CCACAGTCAAACCTTCTTCAAACCCATCTCCACTGCTaGCCAGTGTCCCACGGGGCGAGCTGTCCTCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQSNLLQTHLHC*PVSHGASCPRQ Trigger: CTGCCGAGGACAGCTCGCCCCGTGGGACACTGGCCAGCAGTGGAGATGGGTTTGAAGAAGGTTTGACTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS TCA 72 bp | GGGCCACGAAGGTCACAAGGAGAGGCTCCCAGCCACTaGGGATCAGCTTCGTGTGGTCCCCGTAGAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPRRSQGEAPSH*GSASCGPRRSS Trigger: TGAACTTCTACGGGGACCACACGAAGCTGATCCTCAGTGGCTGGGAGCCTCTCCTTGTGACCTTCGTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | CTTCTCGCGCTGATGCGGCTTGGCGACGCGACTCTGTaGGATGACTTTGACCGCGTAGGCTATACCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LLALMRLGDATL*DDFDRVGYTRL Trigger: GAGTCTGGTATAGCCTACGCGGTCAAAGTCATCCCACAGAGTCGCGTCGCCAAGCCGCATCAGCGCGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | TCTGGTTCCAACAGGGTGTGTCGGGCCTTCCAGATGTaGGCCAGGGACTTTCGGCTACAGAGCTCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSNRVCRAFQM*ARDFRLQSSRK Trigger: TTTCCTGGAGCTCTGTAGCCGAAAGTCCCTGGCCCACATCTGGAAGGCCCGACACACCCTGTTGGAACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
||
| CDS CCA 72 bp | GCCAGAAAGGATCTGGCGCAGGTAGTAGCGAACCTCTaGTTCCAACAGGGTGTGTCGGGCCTTCCAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: ARKDLAQVVANL*FQQGVSGLPDV Trigger: CACATCTGGAAGGCCCGACACACCCTGTTGGAACCAGAGGTTCGCTACTACCTGCGCCAGATCCTTTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS CCA 72 bp | CATGGCGTAAAATCTGTTCAATGGAAGGGCGGTCTCTaGGTGAAGCTCGGAGGATGGCAGCCAGGAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HGVKSVQWKGGL*VKLGGWQPGAA Trigger: GGCAGCTCCTGGCTGCCATCCTCCGAGCTTCACCCAGAGACCGCCCTTCCATTGAACAGATTTTACGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS TCA 72 bp | TCCTATTGGCTGACAGGGCCATGTGTGTGCCATCATTaGAGAGCACGGCTACACGGCGGCTGGACAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SYWLTGPCVCHH*RARLHGGWTAD Trigger: ATCAGCTGTCCAGCCGCCGTGTAGCCGTGCTCTTCAATGATGGCACACACATGGCCCTGTCAGCCAATAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS GCA 72 bp | GTCTCAGCAGCACTTCTGGAGCCACGTAGTTGGGAGTaGCACAGATGGTCTTTTTCCTCTGCTCTGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VSAALLEPRSWE*HRWSFSSALGA Trigger: AGCCCCCAGAGCAGAGGAAAAAGACCATCTGTGGCACTCCCAACTACGTGGCTCCAGAAGTGCTGCTGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS GCA 72 bp | GGGGCACAGAACCCATGGAGAAGGAGAAGTGCTTCGTaGTGGTGGGGTTGTAGTGCACCGTCTTCCTATTGG | + |
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Preference number: 6 (lower is better) Translates to: GAQNPWRRRSAS*WWGCSAPSSYW Trigger: CCAATAGGAAGACGGTGCACTACAACCCCACCAGCACGAAGCACTTCTCCTTCTCCATGGGTTCTGTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS TCA 72 bp | GGGAGAGGCTGGCAGGTAGCGTGTAATGAACCTGCTTaGTGCAGCGGTATGTCTCCTTCAGGTCAGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GRGWQVACNEPA*CSGMSPSGQQS Trigger: AGACTGCTGACCTGAAGGAGACATACCGCTGCATCAAGCAGGTTCATTACACGCTACCTGCCAGCCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS TCA 72 bp | GCTGGTGGGGTTGTAGTGCACCGTCTTCCTATTGGCTaGCAGGGCCATGTGTGTGCCATCATTGAAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AGGVVVHRLPIG*QGHVCAIIEEH Trigger: GTGCTCTTCAATGATGGCACACACATGGCCCTGTCAGCCAATAGGAAGACGGTGCACTACAACCCCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS GCA 72 bp | CCCAGCTTGAGATCTCTGTGTAAGATACCCCTCTGGTaGAAGTACTTGAGGCCAGAAAGGATCTGGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSLRSLCKIPLW*KYLRPERIWRR Trigger: CCTGCGCCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGAGGGGTATCTTACACAGAGATCTCAAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS CCA 72 bp | TTTCCCAGCTTGAGATCTCTGTGTAAGATACCCCTCTaGTGCAAGTACTTGAGGCCAGAAAGGATCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: FPSLRSLCKIPL*CKYLRPERIWR Trigger: GCGCCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGAGGGGTATCTTACACAGAGATCTCAAGCTGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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| CDS TCA 72 bp | TCCAGGAAAATGTATATGTTGTCAGCATCCTCGAAATaGTGTGAAAAGCGAACGATATGGCGGTGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SRKMYMLSASSK*CEKRTIWRCCR Trigger: CCTACAGCACCGCCATATCGTTCGCTTTTCACATCATTTCGAGGATGCTGACAACATATACATTTTCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076859.12 ENSMUST00000147730.2 |
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