Pregenerated sensors for PLIN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011305Ensembl transcript IDs: ENSMUST00000019808.12, ENSMUST00000113072.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCATAAGGGAGGGAGATTCTCCTATGAGGTTGAAAGTGACCTGCTaGGGTCCACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: IIREGDSPMRLKVTC*GPLRPQNHPGQGRE Trigger: TTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTGGACCTCAGCAGGTCACTTTCAACCTCATAGGAGAATCTCCCTCCCTTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGACAGGATCGTGAGTGCTGTCACATaGCCACCAGGGGGCAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LNPPASASCINFGGKDRIVSAVT*PPGGSR Trigger: TCTACTGCCCCCTGGTGGTCATGTGACAGCACTCAC...GATCCTGTCCTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGTGAGTGCTGTCACATaGCCACCAGGGGGCAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: TQTLNPPASASCINFGGKVSAVT*PPGGSR Trigger: TCTACTGCCCCCTGGTGGTCATGTGACAGCACTCAC...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR CAA 90 bp | TGGGCACCAGGTCTTCCTCCAGCCACCTTTCTTTTCCTTGTTTGTTaGTTTGTTTGTTTGTTTGTTTTTGAGACAATCTTGATAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: WAPGLPPATFLFLVC*FVCLFVFETILIRQ Trigger: CTGCCTTATCAAGATTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAGGAAAAGAAAGGTGGCTGGAGGAAGACCTGGTGCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR TCA 72 bp | GCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATaGTGTGGGCACCAGGTCTTCCTCCAGCCACCTTTC | + |
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Preference number: 3 (lower is better) Translates to: AFDSRSSEPPGR*CGHQVFLQPPF Trigger: GAAAGGTGGCTGGAGGAAGACCTGGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR TCA 72 bp | GAGGGAGATTCTCCTATGAGGTTGAAAGTGACCTGCTaGGGTCCACTTAGACCTCAAAATCATCCAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EGDSPMRLKVTC*GPLRPQNHPGQ Trigger: CTGCCCTGGATGATTTTGAGGTCTAAGTGGACCTCAGCAGGTCACTTTCAACCTCATAGGAGAATCTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| 3UTR TCA 72 bp | AACATATTTATTCAGGACCACAAACAGCAAAGCAATTaGGTCTCTGGACACCAGCCAAAAGCATTTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: NIFIQDHKQQSN*VSGHQPKAFDS Trigger: AGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGGAACAGAAGCCCTAGCCTGCGTGAGTGCTGTCACATGACCACCAGGGCCCCGAACACAGCCTaGCAGGGCATCCACTGCATT | + |
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Preference number: 4 (lower is better) Translates to: REGNRSPSLRECCHMTTRAPNTA*QGIHCI Trigger: AATGCAGTGGATGCCCTGGCAGGCTGTGTTCGGGGC...CCTGGTGGTCATGTGACAGCACTCACGCAGGCTAGGGCTTCTGTTCCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGGAACAGAAGCCCTAGCCTGCGTGAGTGCTGTCACATGACCACCAGGGTAGAGCATCCACGCTaGGCTGCACCTCAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: REGNRSPSLRECCHMTTRVEHPR*AAPQPP Trigger: AGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTAC...CCTGGTGGTCATGTGACAGCACTCACGCAGGCTAGGGCTTCTGTTCCCTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGCCCCCAGGTAGATGATGTGGGCACCAGGTCTTCCTCCAGCCACCTTTCTTTTAACTGGGGCTGCAGGTaGTCCAGCAGTGGCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SPQVDDVGTRSSSSHLSFNWGCR*SSSGCA Trigger: CGCACAGCCACTGCTGGAGCACCTGCAGCCCCAGTT...AAAAGAAAGGTGGCTGGAGGAAGACCTGGTGCCCACATCATCTACCTGGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGGAACAGAAGCCCTAGCCTGCGTGAGTGCTGTCACATGACCACCAGGCCAGCTTCTCCGACTTaGCCAGCACCATGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: REGNRSPSLRECCHMTTRPASPT*PAPCPW Trigger: CCATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGG...CCTGGTGGTCATGTGACAGCACTCACGCAGGCTAGGGCTTCTGTTCCCTTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTAGCCTGCAGGTGCTCCAGCAGTaGCTGTGCGTGGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLDLKIIQGREGNRSPSLQVLQQ*LCVVQG Trigger: GCCCTGGACCACGCACAGCCACTGCTGGAGCACCTG...CAGGCTAGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGGAACAGAAGCCCTAGCCTGCGTGAGTGCTGTCACATGACCACCAGGTGGGCCAGCATCTCCTaGGTACGGTGTTTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: REGNRSPSLRECCHMTTRWASIS*VRCLLC Trigger: GCAGAGCAAACACCGTACCCAGGAGATGCTGGCCCA...CCTGGTGGTCATGTGACAGCACTCACGCAGGCTAGGGCTTCTGTTCCCTTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR TCA 90 bp | AGCCCCCAGGTAGATGATGTGGGCACCAGGTCTTCCTCCAGCCACCTTTCTTTTTGTCACCACCATGTCTaGTGGCTGCTGCAGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SPQVDDVGTRSSSSHLSFCHHHV*WLLQEG Trigger: CCCTTCCTGCAGCAGCCATCAGACATGGTGGTGACA...AAAAGAAAGGTGGCTGGAGGAAGACCTGGTGCCCACATCATCTACCTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCGAGCCCAGCAGCGGGTaGCTGTCCTTGGCCGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SQKHLILGVLSPQVDDVGEPSSG*LSLAEL Trigger: CAACTCGGCCAAGGACAGGCACCCGCTGCTGGGCTC...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGCATCCACGCTGCGCTaGACCTCAGCCACCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TQTLNPPASASCINFGGKASTLR*TSATLA Trigger: GGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGC...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGATCCACACAGGCATGTaGCCGGGCCACACTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQTLNPPASASCINFGGKIHTGM*PGHTAP Trigger: CGGGGCAGTGTGGCCCGGGCACATGCCTGTGTGGAT...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | TCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGAGGGGGCTCAGCCTCTTaGCCCCCAGGATCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SGHQPKAFDSRSSEPPGRGGSAS*PPGSAD Trigger: GTCTGCAGATCCTGGGGGGCAAGAGGCTGAGCCCCC...TCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTAGCCTGCCTCAGCCAGAGCAGTaGGTGCCACATCACCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HLDLKIIQGREGNRSPSLPQPEQ*VPHHQG Trigger: GCCTTGGTGATGTGGCACCCACTGCTCTGGCTGAGG...CAGGCTAGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCCTTGCCTTGCCCCCTTaGGGGCTCAGCCTCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQKHLILGVLSPQVDDVGLALPP*GLSLLP Trigger: GGGCAAGAGGCTGAGCCCCCAAGGGGGCAAGGCAAG...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | GACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGAGCCCAGCAGCGGGTaGCTGTCCTTGGCCGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTSQKHLILGVLSPQVDDEPSSG*LSLAEL Trigger: CAACTCGGCCAAGGACAGGCACCCGCTGCTGGGCTC...ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGGTGGCCAACTGGGGCTaGAGGTGCTCCAGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLVANWG*RCSSSG Trigger: GCCACTGCTGGAGCACCTGCAGCCCCAGTTGGCCAC...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | ACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTGTGCCCGGGCCACACTaGCCCGGCCCTCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTNSKAIESLDTSQKHLIVPGPH*PGPQPE Trigger: CTCTGGCTGAGGGCCGGGGCAGTGTGGCCCGGGCAC...AATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTGCCCGGGCCACACTaGCCCGGCCCTCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NSKAIESLDTSQKHLILGVPGPH*PGPQPE Trigger: CTCTGGCTGAGGGCCGGGGCAGTGTGGCCCGGGCAC...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGACAGGATCCCAGTTCTCCCAGGCTaGATCCAGGGTCCTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LNPPASASCINFGGKDRIPVLPG*IQGPEL Trigger: CAGCTCAGGACCCTGGATCCAGCCTGGGAGAACTGG...GATCCTGTCCTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGACAGGATCAGCAGTGGCTGTGCGTaGTCCAGGGCACAGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LNPPASASCINFGGKDRISSGCA*SRAQVV Trigger: GACTACCTGTGCCCTGGACCACGCACAGCCACTGCT...GATCCTGTCCTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTAGCCTGAGCGTTTCCTGCAGCTaGGCCAGCATCTCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HLDLKIIQGREGNRSPSLSVSCS*ASISWV Trigger: TACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCT...CAGGCTAGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGGAACAGAAGCCCTAGCCTGCGTGAGTGCTGTCACATGACCACCAGGTCAGAAGTCCAGCTCTaGCATCATTGTGTGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: REGNRSPSLRECCHMTTRSEVQL*HHCVLA Trigger: GGCAAGCACACAATGATGCCAGAGCTGGACTTCTGA...CCTGGTGGTCATGTGACAGCACTCACGCAGGCTAGGGCTTCTGTTCCCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGAACTGGGGCTGCAGGTaGTCCAGCAGTGGCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLNWGCR*SSSGCA Trigger: CGCACAGCCACTGCTGGAGCACCTGCAGCCCCAGTT...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTGTGGCCAACTGGGGCTaGAGGTGCTCCAGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSIVANWG*RCSSSG Trigger: GCCACTGCTGGAGCACCTGCAGCCCCAGTTGGCCAC...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | GCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCATCCACACAGGCATGTaGCCGGGCCACACTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: AIESLDTSQKHLILGVLSIHTGM*PGHTAP Trigger: CGGGGCAGTGTGGCCCGGGCACATGCCTGTGTGGAT...GCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGGGGGGCTCAGCCTCTTaGCCCCCAGGATCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RTTNSKAIESLDTSQKHLGGSAS*PPGSAD Trigger: GTCTGCAGATCCTGGGGGGCAAGAGGCTGAGCCCCC...CAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTCAACGCCGGCCCCTTTaGGCCAGGTCCACCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSIQRRPL*ARSTMP Trigger: AGGCATGGTGGACCTGGCCCAAAGGGGCCGGCGTTG...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCGCTCAGCCTCAGTCATaGGCAGGAAGCGGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SQKHLILGVLSPQVDDVGAQPQS*AGSGPP Trigger: TGGTGGACCGCTTCCTGCCCATGACTGAGGCTGAGC...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGCTCAGCCTCAGTCATaGGCAGGAAGCGGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: TQTLNPPASASCINFGGKAQPQS*AGSGPP Trigger: TGGTGGACCGCTTCCTGCCCATGACTGAGGCTGAGC...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR TCA 90 bp | GACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTCAGTGCACGTGGCCTTaGCCAGGGGCAAAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: DNLDKAAQTELRLSILLPQCTWP*PGAKPP Trigger: TGGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTG...AGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTCTGCTCCTCCACTGTaGCCACTTCTGGGCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSISAPPL*PLLGPR Trigger: CCGAGGGCCCAGAAGTGGGCACAGTGGAGGAGCAGA...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | AGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGTCTGCTCCTCCACTGTaGCCACTTCTGGGCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RTTNSKAIESLDTSQKHLSAPPL*PLLGPR Trigger: CCGAGGGCCCAGAAGTGGGCACAGTGGAGGAGCAGA...CAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCGCATCCACGCTGCGCTaGACCTCAGCCACCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPAASTLR*TSATLA Trigger: GGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGC...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR GCA 90 bp | GACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTAGAGCATCCACGCTaGGCTGCACCTCAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: DTSQKHLILGVLSPQVDDVEHPR*AAPQPP Trigger: AGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTAC...ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | TCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGACCGAGTTGTAAGCACTaGACACGGCAGTGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGHQPKAFDSRSSEPPGRPSCKH*TRQCTW Trigger: CCACGTGCACTGCCGTGTCCAGTGCTTACAACTCGG...TCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCCAGGTGCTCCAGCAGTaGCTGTGCGTGGTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPAQVLQQ*LCVVQG Trigger: GCCCTGGACCACGCACAGCCACTGCTGGAGCACCTG...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGCCATGGCTTGACTCATaGAGCGCCTCAGCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLPWLDS*SASAPH Trigger: GTGGGGAGCTGAGGCGCTCCATGAGTCAAGCCATGG...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGCCAGCACCATGTCCATaGCTTGACTCATGGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: TQTLNPPASASCINFGGKPAPCP*LDSWSA Trigger: GGCGCTCCATGAGTCAAGCCATGGACATGGTGCTGG...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS-3UTR CCA 90 bp | GAGGTCCACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTCCTCTCTGCATATGCTaGATCAGCTCCAGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVHLDLKIIQGREGNRSPPLCIC*ISSSVS Trigger: GGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGG...AGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTGGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGTCCCAGGCCCTCTTCTaGGCTGGCCAGTCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLSQALF*AGQSMC Trigger: ACACATGGACTGGCCAGCCCAGAAGAGGGCCTGGGA...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCCTTGCCTTGCCCCCTTaGGGGCTCAGCCTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPALALPP*GLSLLP Trigger: GGGCAAGAGGCTGAGCCCCCAAGGGGGCAAGGCAAG...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR TCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCCAGTGCACGTGGCCTTaGCCAGGGGCAAAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPAQCTWP*PGAKPP Trigger: TGGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTG...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR TCA 90 bp | AAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCAGGGGTCCACCATGCCTGTaGCACTTTTGGCCACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KHLILGVLSPQVDDVGTRGPPCL*HFWPLY Trigger: ATACAGTGGCCAAAAGTGTCACAGGCATGGTGGACC...CCTGGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGAACCATGTCTGATGGCTaGTGCAGGAAGGGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGHQPKAFDSRSSEPPGRTMSDG*CRKGSF Trigger: GAAGCTGCCCTTCCTGCAGCAGCCATCAGACATGGT...TCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GAGACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCGCCCCGAACACAGCCTaGCAGGGCATCCACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ETILIRQLKLNSDSQSSCAPNTA*QGIHCI Trigger: AATGCAGTGGATGCCCTGGCAGGCTGTGTTCGGGGC...GCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTCCCAGTTCTCCCAGGCTaGATCCAGGGTCCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TILIRQLKLNSDSQSSCLPVLPG*IQGPEL Trigger: CAGCTCAGGACCCTGGATCCAGCCTGGGAGAACTGG...GAGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | GAGACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCAGCAGTGGCTGTGCGTaGTCCAGGGCACAGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETILIRQLKLNSDSQSSCSSGCA*SRAQVV Trigger: GACTACCTGTGCCCTGGACCACGCACAGCCACTGCT...GCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | ACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCAACGCCGGCCCCTTTaGGCCAGGTCCACCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTNSKAIESLDTSQKHLIQRRPL*ARSTMP Trigger: AGGCATGGTGGACCTGGCCCAAAGGGGCCGGCGTTG...AATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCGGCCCTCTTCTGGGCTaGCCAGTCCATGTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPAGPLLG*PVHVCP Trigger: TGGGCACACATGGACTGGCCAGCCCAGAAGAGGGCC...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGTCCCAGGCCCTCTTCTaGGCTGGCCAGTCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTTNSKAIESLDTSQKHLSQALF*AGQSMC Trigger: ACACATGGACTGGCCAGCCCAGAAGAGGGCCTGGGA...CAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTCCACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTTCAGAAGTCCAGCTCTaGCATCATTGTGTGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVHLDLKIIQGREGNRSPSEVQL*HHCVLA Trigger: GGCAAGCACACAATGATGCCAGAGCTGGACTTCTGA...AGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTGGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGTCACCACCATGTCTaGTGGCTGCTGCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSICHHHV*WLLQEG Trigger: CCCTTCCTGCAGCAGCCATCAGACATGGTGGTGACA...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATACCATGTCTGATGGCTaGTGCAGGAAGGGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSQKHLILGVLSPQVDDTMSDG*CRKGSF Trigger: GAAGCTGCCCTTCCTGCAGCAGCCATCAGACATGGT...ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCAGGGTACGGTGTTTGCTCTaGCTCAGTTTCCCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHLILGVLSPQVDDVGTRVRCLL*LSFPKE Trigger: CTCTTTGGGGAAACTGAGGCAGAGCAAACACCGTAC...CCTGGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGTGCCAGGGCATCCACTaGATTCTGCAGCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTTNSKAIESLDTSQKHLCQGIH*ILQLQG Trigger: ACCCTGGAGCTGCAGAATGCAGTGGATGCCCTGGCA...CAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCTTCACCACATTCTGCTaGTCCAGTTCTCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKHLILGVLSPQVDDVGTFTTFC*SSSPRL Trigger: CAGCCTGGGAGAACTGGACCAGCAGAATGTGGTGAA...GGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCTTCACCACATTCTGCTaGTCCAGTTCTCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKHLILGVLSPQVDDVGFTTFC*SSSPRL Trigger: CAGCCTGGGAGAACTGGACCAGCAGAATGTGGTGAA...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCCCATGGCTTGACTCATaGAGCGCCTCAGCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPAPWLDS*SASAPH Trigger: GTGGGGAGCTGAGGCGCTCCATGAGTCAAGCCATGG...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTCCCAGCACCATGTCCATaGCTTGACTCATGGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TILIRQLKLNSDSQSSCLPAPCP*LDSWSA Trigger: GGCGCTCCATGAGTCAAGCCATGGACATGGTGCTGG...GAGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTAGCGTTTCCTGCAGCTaGGCCAGCATCTCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSISVSCS*ASISWV Trigger: TACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCT...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCCAGCTCCTGAGTCTTTaGGGGATGGAAAGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLILGVLSPQVDDVGTQLLSL*GMESRA Trigger: AGCCCTACTTTCCATCCCCCAAAGACTCAGGAGCTG...GGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGACTGTTCCACCAGGATaGGTGCAAAGGGCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLTVPPG*VQRAPQ Trigger: TTGTGGGGCCCTTTGCACCCATCCTGGTGGAACAGT...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | GACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATACTGTTCCACCAGGATaGGTGCAAAGGGCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DTSQKHLILGVLSPQVDDTVPPG*VQRAPQ Trigger: TTGTGGGGCCCTTTGCACCCATCCTGGTGGAACAGT...ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGGGGGTAAGGACAGGATCATAAGGGAGGGAGATTCTCCTATGAGGTTGCGATTCACCACATTCTaGTGGTCCAGTTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFGGKDRIIREGDSPMRLRFTTF*WSSSPR Trigger: CCTGGGAGAACTGGACCAGCAGAATGTGGTGAATCG...CAACCTCATAGGAGAATCTCCCTCCCTTATGATCCTGTCCTTACCCCCAAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCGTACGGTGTTTGCTCTaGCTCAGTTTCCCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKHLILGVLSPQVDDVGVRCLL*LSFPKE Trigger: CTCTTTGGGGAAACTGAGGCAGAGCAAACACCGTAC...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCAGTAGGGCTAGGGCTTaGCCCTCTCTGCATATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIESLDTSQKHLILGVLSSRARA*PSLHML Trigger: CAGCATATGCAGAGAGGGGCAAGCCCTAGCCCTACT...GCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCTGCCAGGGCATCCACTaGATTCTGCAGCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPACQGIH*ILQLQG Trigger: ACCCTGGAGCTGCAGAATGCAGTGGATGCCCTGGCA...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | GCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCAGCTCCACCTCACTGTaGCTGCGGCCATTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIESLDTSQKHLILGVLSSSTSL*LRPFSR Trigger: TCTAGAGAATGGCCGCAGCCACAGTGAGGTGGAGCT...GCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGACCTCAGCCAGAGCAGTaGGTGCCACATCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSKAIESLDTSQKHLILGPQPEQ*VPHHQG Trigger: GCCTTGGTGATGTGGCACCCACTGCTCTGGCTGAGG...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCATGTCTGATGGCTGCTaGAGGAAGGGCAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIESLDTSQKHLILGVLSMSDGC*RKGSFS Trigger: AGAGAAGCTGCCCTTCCTGCAGCAGCCATCAGACAT...GCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGACCAGCTTCTCCGACTTaGCCAGCACCATGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKAIESLDTSQKHLILGPASPT*PAPCPW Trigger: CCATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGG...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | CATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAGTAGGGCTAGGGCTTaGCCCTCTCTGCATATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HIYSGPQTAKQLSLWTPASRARA*PSLHML Trigger: CAGCATATGCAGAGAGGGGCAAGCCCTAGCCCTACT...GGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATCACCAAGGCAGTGTaGATCAGCAAAGGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTTNSKAIESLDTSQKHLITKAV*ISKGGL Trigger: CAGGCCACCTTTGCTGATGCACACTGCCTTGGTGAT...CAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTATCACCAAGGCAGTGTaGATCAGCAAAGGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DNLDKAAQTELRLSILLPITKAV*ISKGGL Trigger: CAGGCCACCTTTGCTGATGCACACTGCCTTGGTGAT...AGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | GACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTCAGCTCCTGAGTCTTTaGGGGATGGAAAGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLDKAAQTELRLSILLPQLLSL*GMESRA Trigger: AGCCCTACTTTCCATCCCCCAAAGACTCAGGAGCTG...AGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | GACAATCTTGATAAGGCAGCTCAAACTGAACTCAGACTCTCAATCCTCCTGCCTGCATCCACTGCATTCTaGAGCTCCAGGGTCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: DNLDKAAQTELRLSILLPASTAF*SSRVKL Trigger: AAGTTTGACCCTGGAGCTGCAGAATGCAGTGGATGC...AGGCAGGAGGATTGAGAGTCTGAGTTCAGTTTGAGCTGCCTTATCAAGATTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTGCATCCACTGCATTCTaGAGCTCCAGGGTCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQTAKQLSLWTPAKSIASTAF*SSRVKL Trigger: AAGTTTGACCCTGGAGCTGCAGAATGCAGTGGATGC...AATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CCA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAAGCTCCACCTCACTGTaGCTGCGGCCATTCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSKAIESLDTSQKHLILGSSTSL*LRPFSR Trigger: TCTAGAGAATGGCCGCAGCCACAGTGAGGTGGAGCT...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGACGATTCACCACATTCTaGTGGTCCAGTTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKAIESLDTSQKHLILGRFTTF*WSSSPR Trigger: CCTGGGAGAACTGGACCAGCAGAATGTGGTGAATCG...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AGACCACATCAAACATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTACACTACACACACAGTaGTCAGCAAGGCGGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPHQTYLFRTTNSKAIESTLHTQ*SARRQA Trigger: CGCCTGCCGCCTTGCTGAGCACTGTGTGTGTAGTGT...AGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTTTGATGTGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019808.12 |
||
| CDS-3UTR CCA 90 bp | CAAACATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCCCTCTCTGCATATGCTaGATCAGCTCCAGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTYLFRTTNSKAIESLDTPLCIC*ISSSVS Trigger: GGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGG...GGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| 3UTR CAA 72 bp | AAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTaGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAIESLDTSQKH*ILGVLSPQVDD Trigger: ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR GCA 90 bp | AGACCACATCAAACATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTATGTCTGATGGCTGCTaGAGGAAGGGCAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPHQTYLFRTTNSKAIESMSDGC*RKGSFS Trigger: AGAGAAGCTGCCCTTCCTGCAGCAGCCATCAGACAT...AGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTTTGATGTGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019808.12 |
||
| 3UTR CAA 72 bp | GGTCTTCCTCCAGCCACCTTTCTTTTCCTTGTTTGTTaGTTTGTTTGTTTGTTTGTTTTTGAGACAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLPPATFLFLVC*FVCLFVFETIL Trigger: CAAGATTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAGGAAAAGAAAGGTGGCTGGAGGAAGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | GCCTGTAGAGCATCCACGCTGCGCTGCACCTCAGCCACCTTGGCCTaGGCACTAGGTGGCAGGCCCCGAACACAGCCTGCCAGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ACRASTLRCTSATLA*ALGGRPRTQPARAS Trigger: GGATGCCCTGGCAGGCTGTGTTCGGGGCCTGCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTACAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | GGCCCTCGGCCTCAGCTGCCAGGACTGCTAGCTCAGCCTCAGTCATaGGCAGGAAGCGGTCCACCAGCTTCTCCGACTTGCCCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRPQLPGLLAQPQS*AGSGPPASPTCPAP Trigger: TGGTGCTGGGCAAGTCGGAGAAGCTGGTGGACCGCTTCCTGCCCATGACTGAGGCTGAGCTAGCAGTCCTGGCAGCTGAGGCCGAGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | AGGCATGTGCCCGGGCCACACTGCCCCGGCCCTCAGCCAGAGCAGTaGGTGCCACATCACCAAGGCAGTGTGCATCAGCAAAGGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHVPGPHCPGPQPEQ*VPHHQGSVHQQRWP Trigger: AGGCCACCTTTGCTGATGCACACTGCCTTGGTGATGTGGCACCCACTGCTCTGGCTGAGGGCCGGGGCAGTGTGGCCCGGGCACATGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | CAGTGTGCATCAGCAAAGGTGGCCTGTAGAGCATCCACGCTGCGCTaGACCTCAGCCACCTTGGCCTGGGCACTAGGTGGCAGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QCASAKVACRASTLR*TSATLAWALGGRPR Trigger: TCGGGGCCTGCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTACAGGCCACCTTTGCTGATGCACACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS TCA 90 bp | GAGGATCAGGGTCACCCACCACCTCGTCCACACAGGTGGCCAGGTTaGTCAGGGGCTCCGACTGTTCCACCAGGATGGGTGCAAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDQGHPPPRPHRWPG*SGAPTVPPGWVQRA Trigger: GGCCCTTTGCACCCATCCTGGTGGAACAGTCGGAGCCCCTGATCAACCTGGCCACCTGTGTGGACGAGGTGGTGGGTGACCCTGATCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | GGTGGCAGGCCCCGAACACAGCCTGCCAGGGCATCCACTGCATTCTaGAGCTCCAGGGTCAAACTTCGAGACAGAGCCAGTGTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGRPRTQPARASTAF*SSRVKLRDRASVSS Trigger: GCTGGAGACACTGGCTCTGTCTCGAAGTTTGACCCTGGAGCTGCAGAATGCAGTGGATGCCCTGGCAGGCTGTGTTCGGGGCCTGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | CTGTTCCACCAGGATGGGTGCAAAGGGCCCCACAAGCCAGGGCAGTaGCATGGCCCGCAGGACCAAATCCAGGAACTCATCCACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFHQDGCKGPHKPGQ*HGPQDQIQELIHTG Trigger: GCCTGTGTGGATGAGTTCCTGGATTTGGTCCTGCGGGCCATGCCACTGCCCTGGCTTGTGGGGCCCTTTGCACCCATCCTGGTGGAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | CAGCCTCAGTCATGGGCAGGAAGCGGTCCACCAGCTTCTCCGACTTaGCCAGCACCATGTCCATGGCTTGACTCATGGAGCGCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPQSWAGSGPPASPT*PAPCPWLDSWSASA Trigger: AGCTGAGGCGCTCCATGAGTCAAGCCATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGGTGGACCGCTTCCTGCCCATGACTGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | GGGCTTGCCCCTCTCTGCATATGCTGGATCAGCTCCAGCGTTTCCTaGAGCTGGGCCAGCATCTCCTGGGTACGGTGTTTGCTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLAPLCICWISSSVS*SWASISWVRCLLCL Trigger: GAGGCAGAGCAAACACCGTACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGGGGCAAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | AACTTCGAGACAGAGCCAGTGTCTCCAGCTCCACCTCACTGTGGCTaGGGCCATTCTCTAGACACGGGCTCCAGCTCCCCCACAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NFETEPVSPAPPHCG*GHSLDTGSSSPTAP Trigger: AGGAGCTGTGGGGGAGCTGGAGCCCGTGTCTAGAGAATGGCCGCAGCCACAGTGAGGTGGAGCTGGAGACACTGGCTCTGTCTCGAAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | GGCACTAGGTGGCAGGCCCCGAACACAGCCTGCCAGGGCATCCACTaGATTCTGCAGCTCCAGGGTCAAACTTCGAGACAGAGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTRWQAPNTACQGIH*ILQLQGQTSRQSQC Trigger: ACACTGGCTCTGTCTCGAAGTTTGACCCTGGAGCTGCAGAATGCAGTGGATGCCCTGGCAGGCTGTGTTCGGGGCCTGCCACCTAGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | ACTGTGGCCAACTGGGGCTGCAGGTGCTCCAGCAGTGGCTGTGCGTaGTCCAGGGCACAGGTAGTCACACTACACACACAGTGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVANWGCRCSSSGCA*SRAQVVTLHTQCSA Trigger: TGCTGAGCACTGTGTGTGTAGTGTGACTACCTGTGCCCTGGACCACGCACAGCCACTGCTGGAGCACCTGCAGCCCCAGTTGGCCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | GTCAAACTTCGAGACAGAGCCAGTGTCTCCAGCTCCACCTCACTGTaGCTGCGGCCATTCTCTAGACACGGGCTCCAGCTCCCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKLRDRASVSSSTSL*LRPFSRHGLQLPHS Trigger: GCTGTGGGGGAGCTGGAGCCCGTGTCTAGAGAATGGCCGCAGCCACAGTGAGGTGGAGCTGGAGACACTGGCTCTGTCTCGAAGTTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | GAGCAGTGGGTGCCACATCACCAAGGCAGTGTGCATCAGCAAAGGTaGCCTGTAGAGCATCCACGCTGCGCTGCACCTCAGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EQWVPHHQGSVHQQR*PVEHPRCAAPQPPW Trigger: CCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTACAGGCCACCTTTGCTGATGCACACTGCCTTGGTGATGTGGCACCCACTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | ATTCACTGTGGCCAACTGGGGCTGCAGGTGCTCCAGCAGTGGCTGTaGGTGGTCCAGGGCACAGGTAGTCACACTACACACACAGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IHCGQLGLQVLQQWL*VVQGTGSHTTHTVL Trigger: GAGCACTGTGTGTGTAGTGTGACTACCTGTGCCCTGGACCACGCACAGCCACTGCTGGAGCACCTGCAGCCCCAGTTGGCCACAGTGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGGACAGGATCCCAACGCCGGCCCCTTaGGGCCAGGTCCACCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNPPASASCINFGGKDRIPTPAP*GQVHHA Trigger: GGCATGGTGGACCTGGCCCAAAGGGGCCGGCGTTGG...GATCCTGTCCTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS TCA 90 bp | CCTTGGCCGAGTTGTAAGCACTGGACACGGCAGTGCACGTGGCCTTaGCCAGGGGCAAAGCCACCACTCGATTCACCACATTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PWPSCKHWTRQCTWP*PGAKPPLDSPHSAG Trigger: ACCAGCAGAATGTGGTGAATCGAGTGGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTGCCGTGTCCAGTGCTTACAACTCGGCCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | GCCCCTCTCTGCATATGCTGGATCAGCTCCAGCGTTTCCTGCAGCTaGGCCAGCATCTCCTGGGTACGGTGTTTGCTCTGCCTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: APLCICWISSSVSCS*ASISWVRCLLCLSF Trigger: GAAACTGAGGCAGAGCAAACACCGTACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTCCACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTGCAGTGCACGTGGCCTaGACCAGGGGCAAAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EVHLDLKIIQGREGNRSPAVHVA*TRGKAT Trigger: GGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTGC...AGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTGGACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTAGCCTGTGCACCTCAGCCACCTaGGCCTGGGCACTAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLDLKIIQGREGNRSPSLCTSAT*AWALGG Trigger: GCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCA...CAGGCTAGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | CCAGCGTTTCCTGCAGCTGGGCCAGCATCTCCTGGGTACGGTGTTTaGTCTGCCTCAGTTTCCCCAAAGAGTGTTCATAGGCGAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAFPAAGPASPGYGV*SASVSPKSVHRRDG Trigger: GCCATCTCGCCTATGAACACTCTTTGGGGAAACTGAGGCAGAGCAAACACCGTACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 90 bp | CCACCACTCGATTCACCACATTCTGCTGGTCCAGTTCTCCCAGGCTaGATCCAGGGTCCTGAGCTGTCTGATCACCGGACATTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPLDSPHSAGPVLPG*IQGPELSDHRTFCC Trigger: ACAGCAGAATGTCCGGTGATCAGACAGCTCAGGACCCTGGATCCAGCCTGGGAGAACTGGACCAGCAGAATGTGGTGAATCGAGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAGGTAGATGATGTGGGCACCAGGTCTTCCTCCAGCCACCTTTCTTTTTCCTGGGTACGGTGTTaGCTCTGCCTCAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPQVDDVGTRSSSSHLSFSWVRC*LCLSFP Trigger: GGGGAAACTGAGGCAGAGCAAACACCGTACCCAGGA...AAAAGAAAGGTGGCTGGAGGAAGACCTGGTGCCCACATCATCTACCTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCTGCACCTCAGCCACCTaGGCCTGGGCACTAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QKHLILGVLSPQVDDVGTCTSAT*AWALGG Trigger: GCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCA...GGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CACTTAGACCTCAAAATCATCCAGGGCAGGGAAGGGAACAGAAGCCCTAGCCTGTCCTGGGTACGGTGTTaGCTCTGCCTCAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLDLKIIQGREGNRSPSLSWVRC*LCLSFP Trigger: GGGGAAACTGAGGCAGAGCAAACACCGTACCCAGGA...CAGGCTAGGGCTTCTGTTCCCTTCCCTGCCCTGGATGATTTTGAGGTCTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | AAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCAGGCACAAAGTAGCCCTGTaGCTGCCTCTGCTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KHLILGVLSPQVDDVGTRHKVAL*LPLLLH Trigger: GTGGAGGAGCAGAGGCAGCAACAGGGCTACTTTGTG...CCTGGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGACACAGGTGGCCAGGTaGATCAGGGGCTCCGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQTLNPPASASCINFGGKTQVAR*IRGSDC Trigger: ACAGTCGGAGCCCCTGATCAACCTGGCCACCTGTGT...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 90 bp | TTGGCCACTGTATCCTTGGCTGATGTCACCACCATGTCTGATGGCTaGTGCAGGAAGGGCAGCTTCTCTTCCAATTTGTCTAGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LATVSLADVTTMSDG*CRKGSFSSNLSSPL Trigger: CAGGGGACTAGACAAATTGGAAGAGAAGCTGCCCTTCCTGCAGCAGCCATCAGACATGGTGGTGACATCAGCCAAGGATACAGTGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCACCACCAGCTTCTCCGACTaGCCCAGCACCATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QKHLILGVLSPQVDDVGTTSFSD*PSTMSM Trigger: CATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGGT...GGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | ACTCAGACTCTCAATCCTCCTGCCTCAGCCTCATGTATCAACTTTGGGGGTAAGACCAGCTTCTCCGACTaGCCCAGCACCATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TQTLNPPASASCINFGGKTSFSD*PSTMSM Trigger: CATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGGT...CTTACCCCCAAAGTTGATACATGAGGCTGAGGCAGGAGGATTGAGAGTCTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | AGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATGTGGGCCACAAAGTAGCCCTGTaGCTGCCTCTGCTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQKHLILGVLSPQVDDVGHKVAL*LPLLLH Trigger: GTGGAGGAGCAGAGGCAGCAACAGGGCTACTTTGTG...GCCCACATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | ACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTGCAGTGCACGTGGCCTaGACCAGGGGCAAAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTNSKAIESLDTSQKHLIAVHVA*TRGKAT Trigger: GGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTGC...AATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | AACAGCAAAGCAATTGAGTCTCTGGACACCAGCCAAAAGCATTTGATTCTAGGAACACAGGTGGCCAGGTaGATCAGGGGCTCCGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSKAIESLDTSQKHLILGTQVAR*IRGSDC Trigger: ACAGTCGGAGCCCCTGATCAACCTGGCCACCTGTGT...TCCTAGAATCAAATGCTTTTGGCTGGTGTCCAGAGACTCAATTGCTTTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CAAACATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCCATTGTGTGCTTGCCTaGCCCCCTTGGGGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTYLFRTTNSKAIESLDTHCVLA*PPWGLS Trigger: GCTGAGCCCCCAAGGGGGCAAGGCAAGCACACAATG...GGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | GACACCAGCCAAAAGCATTTGATTCTAGGAGTTCTGAGCCCCCAGGTAGATGATAGCTTCTCTTCCAATTaGTCTAGTCCCCTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTSQKHLILGVLSPQVDDSFSSN*SSPLQA Trigger: TGCCTGCAGGGGACTAGACAAATTGGAAGAGAAGCT...ATCATCTACCTGGGGGCTCAGAACTCCTAGAATCAAATGCTTTTGGCTGGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS-3UTR CAA 90 bp | CAAACATATTTATTCAGGACCACAAACAGCAAAGCAATTGAGTCTCTGGACACCAGCTTCTCTTCCAATTaGTCTAGTCCCCTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTYLFRTTNSKAIESLDTSFSSN*SSPLQA Trigger: TGCCTGCAGGGGACTAGACAAATTGGAAGAGAAGCT...GGTGTCCAGAGACTCAATTGCTTTGCTGTTTGTGGTCCTGAATAAATATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CCA 72 bp | GCATCCACGCTGCGCTGCACCTCAGCCACCTTGGCCTaGGCACTAGGTGGCAGGCCCCGAACACAGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASTLRCTSATLA*ALGGRPRTQPA Trigger: GGCAGGCTGTGTTCGGGGCCTGCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CAA 90 bp | AAGGTGGCCTGTAGAGCATCCACGCTGCGCTGCACCTCAGCCACCTaGGCCTGGGCACTAGGTGGCAGGCCCCGAACACAGCCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KVACRASTLRCTSAT*AWALGGRPRTQPAR Trigger: CCTGGCAGGCTGTGTTCGGGGCCTGCCACCTAGTGCCCAGGCCAAGGTGGCTGAGGTGCAGCGCAGCGTGGATGCTCTACAGGCCACCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 72 bp | GGAACTCATCCACACAGGCATGTGCCCGGGCCACACTaGCCCGGCCCTCAGCCAGAGCAGTGGGTGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GTHPHRHVPGPH*PGPQPEQWVPH Trigger: ATGTGGCACCCACTGCTCTGGCTGAGGGCCGGGGCAGTGTGGCCCGGGCACATGCCTGTGTGGATGAGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS GCA 72 bp | CTCCCAGGCCCTCTTCTGGGCTGGCCAGTCCATGTGTaGCCAGCGAGGATCAGGGTCACCCACCACCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPGPLLGWPVHV*PARIRVTHHLV Trigger: GACGAGGTGGTGGGTGACCCTGATCCTCGCTGGGCACACATGGACTGGCCAGCCCAGAAGAGGGCCTGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS TCA 72 bp | GGTCACCCACCACCTCGTCCACACAGGTGGCCAGGTTaGTCAGGGGCTCCGACTGTTCCACCAGGATGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GHPPPRPHRWPG*SGAPTVPPGWV Trigger: CACCCATCCTGGTGGAACAGTCGGAGCCCCTGATCAACCTGGCCACCTGTGTGGACGAGGTGGTGGGTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
||
| CDS CAA 90 bp | CGAGGATCAGGGTCACCCACCACCTCGTCCACACAGGTGGCCAGGTaGATCAGGGGCTCCGACTGTTCCACCAGGATGGGTGCAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RGSGSPTTSSTQVAR*IRGSDCSTRMGAKG Trigger: GCCCTTTGCACCCATCCTGGTGGAACAGTCGGAGCCCCTGATCAACCTGGCCACCTGTGTGGACGAGGTGGTGGGTGACCCTGATCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | CCTCAGCTGCCAGGACTGCTAGCTCAGCCTCAGTCATaGGCAGGAAGCGGTCCACCAGCTTCTCCGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PQLPGLLAQPQS*AGSGPPASPTC Trigger: GCAAGTCGGAGAAGCTGGTGGACCGCTTCCTGCCCATGACTGAGGCTGAGCTAGCAGTCCTGGCAGCTGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | CAGGATGGGTGCAAAGGGCCCCACAAGCCAGGGCAGTaGCATGGCCCGCAGGACCAAATCCAGGAACTCATC | + |
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Preference number: 6 (lower is better) Translates to: QDGCKGPHKPGQ*HGPQDQIQELI Trigger: GATGAGTTCCTGGATTTGGTCCTGCGGGCCATGCCACTGCCCTGGCTTGTGGGGCCCTTTGCACCCATCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | ACCAGGGGCAAAGCCACCACTCGATTCACCACATTCTaGTGGTCCAGTTCTCCCAGGCTGGATCCAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TRGKATTRFTTF*WSSSPRLDPGS Trigger: GGACCCTGGATCCAGCCTGGGAGAACTGGACCAGCAGAATGTGGTGAATCGAGTGGTGGCTTTGCCCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | TCATGGGCAGGAAGCGGTCCACCAGCTTCTCCGACTTaGCCAGCACCATGTCCATGGCTTGACTCATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SWAGSGPPASPT*PAPCPWLDSWS Trigger: GCTCCATGAGTCAAGCCATGGACATGGTGCTGGGCAAGTCGGAGAAGCTGGTGGACCGCTTCCTGCCCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | TGGAAAGTAGGGCTAGGGCTTGCCCCTCTCTGCATATaGTGGATCAGCTCCAGCGTTTCCTGCAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WKVGLGLAPLCI*WISSSVSCSWA Trigger: GGCCCAGCTGCAGGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGGGGCAAGCCCTAGCCCTACTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | GGGGGATGGAAAGTAGGGCTAGGGCTTGCCCCTCTCTaGATATGCTGGATCAGCTCCAGCGTTTCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGWKVGLGLAPL*ICWISSSVSCS Trigger: GCTGCAGGAAACGCTGGAGCTGATCCAGCATATGCAGAGAGGGGCAAGCCCTAGCCCTACTTTCCATCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | CCCCGAACACAGCCTGCCAGGGCATCCACTGCATTCTaGAGCTCCAGGGTCAAACTTCGAGACAGAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PRTQPARASTAF*SSRVKLRDRAS Trigger: ACTGGCTCTGTCTCGAAGTTTGACCCTGGAGCTGCAGAATGCAGTGGATGCCCTGGCAGGCTGTGTTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | GTGCCACATCACCAAGGCAGTGTGCATCAGCAAAGGTaGCCTGTAGAGCATCCACGCTGCGCTGCACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VPHHQGSVHQQR*PVEHPRCAAPQ Trigger: CTGAGGTGCAGCGCAGCGTGGATGCTCTACAGGCCACCTTTGCTGATGCACACTGCCTTGGTGATGTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CAA 90 bp | TGGGCCAGGTCCACCATGCCTGTGACACTTTTGGCCACTGTATCCTaGGCTGATGTCACCACCATGTCTGATGGCTGCTGCAGGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WARSTMPVTLLATVS*ADVTTMSDGCCRKG Trigger: GCCCTTCCTGCAGCAGCCATCAGACATGGTGGTGACATCAGCCAAGGATACAGTGGCCAAAAGTGTCACAGGCATGGTGGACCTGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS TCA 72 bp | TTCTCTAGACACGGGCTCCAGCTCCCCCACAGCTCCTaGGTCTTTGGGGGATGGAAAGTAGGGCTAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FSRHGLQLPHSS*VFGGWKVGLGL Trigger: AAGCCCTAGCCCTACTTTCCATCCCCCAAAGACTCAGGAGCTGTGGGGGAGCTGGAGCCCGTGTCTAGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | TGCATATGCTGGATCAGCTCCAGCGTTTCCTGCAGCTaGGCCAGCATCTCCTGGGTACGGTGTTTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CICWISSSVSCS*ASISWVRCLLC Trigger: GCAGAGCAAACACCGTACCCAGGAGATGCTGGCCCAGCTGCAGGAAACGCTGGAGCTGATCCAGCATATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS TCA 72 bp | AGTTGTAAGCACTGGACACGGCAGTGCACGTGGCCTTaGCCAGGGGCAAAGCCACCACTCGATTCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: SCKHWTRQCTWP*PGAKPPLDSPH Trigger: ATGTGGTGAATCGAGTGGTGGCTTTGCCCCTGGTCAAGGCCACGTGCACTGCCGTGTCCAGTGCTTACAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | GATTCACCACATTCTGCTGGTCCAGTTCTCCCAGGCTaGATCCAGGGTCCTGAGCTGTCTGATCACCGGACA | + |
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Preference number: 6 (lower is better) Translates to: DSPHSAGPVLPG*IQGPELSDHRT Trigger: TGTCCGGTGATCAGACAGCTCAGGACCCTGGATCCAGCCTGGGAGAACTGGACCAGCAGAATGTGGTGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CCA 72 bp | ATTTGTCTAGTCCCCTGCAGGCAAGATCATTCACTGTaGCCAACTGGGGCTGCAGGTGCTCCAGCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ICLVPCRQDHSL*PTGAAGAPAVA Trigger: AGCCACTGCTGGAGCACCTGCAGCCCCAGTTGGCCACAGTGAATGATCTTGCCTGCAGGGGACTAGACAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS CAA 72 bp | TCCACCATGCCTGTGACACTTTTGGCCACTGTATCCTaGGCTGATGTCACCACCATGTCTGATGGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: STMPVTLLATVS*ADVTTMSDGCC Trigger: GCAGCAGCCATCAGACATGGTGGTGACATCAGCCAAGGATACAGTGGCCAAAAGTGTCACAGGCATGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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| CDS GCA 72 bp | GTATCCTTGGCTGATGTCACCACCATGTCTGATGGCTaGTGCAGGAAGGGCAGCTTCTCTTCCAATTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VSLADVTTMSDG*CRKGSFSSNLS Trigger: AGACAAATTGGAAGAGAAGCTGCCCTTCCTGCAGCAGCCATCAGACATGGTGGTGACATCAGCCAAGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019808.12 ENSMUST00000113072.3 |
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