Pregenerated sensors for PLG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059481Ensembl transcript IDs: ENSMUST00000014578.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCATGTAGTGTCCCAGTTTaGTTACTGTCAGTTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPCSVPV*LLSVFP Trigger: TGGAAAAACTGACAGTAATCAAACTGGGACACTACA...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAGAAGCACCAGGGCCTTaGCTCCCCGTCAGGGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKEAPGP*LPVRVA Trigger: CGCAACCCTGACGGGGAGCCAAGGCCCTGGTGCTTC...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCGGTTTGTCTGTGGGGTaGAGATGCTGTGCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPGLSVG*RCCACG Trigger: CCCACAGGCACAGCATCTTCACCCCACAGACAAACC...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTTCCCAGACACGGTaGCAGACACGGTCCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: HSSDGLLSQNPEVHRQENFSQTR*QTRSLG Trigger: ACCGAGGGACCGTGTCTGTCACCGTGTCTGGGAAAA...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTGCTCACTCCAGCGCTaGCAGGTTTTCCCAGACACG | + |
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Preference number: 4 (lower is better) Translates to: HSSDGLLSQNPEVHRQENCSLQR*QVFPDT Trigger: CGTGTCTGGGAAAACCTGTCAGCGCTGGAGTGAGCA...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTGCACCGAAAGTCCCTTaGGTCTCTCCCCAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSDGLLSQNPEVHRQENFAPKVP*VSPQPV Trigger: CACCGGCTGGGGAGAGACTCAAGGGACTTTCGGTGC...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGCAGACATTGGTAGGTTaGGCTGGGTGGGGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQQTLVG*AGWGRG Trigger: CCCCCGCCCCCACCCAGCCCAACCTACCAATGTCTG...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAACCGTGGGTTTGTCTGTaGGGTGAAGATGCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKPWVCL*GEDAVP Trigger: AGGCACAGCATCTTCACCCCACAGACAAACCCACGG...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGGGTGCCAGCTGCAGTaGCGGCCGTTTTGCCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FIFNKGHSSDGLLSQNPEGCQLQ*RPFCPD Trigger: ATCGGGGCAAAACGGCCGTCACTGCAGCTGGCACCC...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGCACCACTCTTTGTCCTaGACATGGTTCCTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRHHSLS*TWFLCS Trigger: GCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTG...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGATCAGCTGGCTGTCAGTaGTATAGCACCAGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKGHSSDGLLSQNPEVHRSAGCQ*YSTREQ Trigger: CTGCTCCCTGGTGCTATACCACTGACAGCCAGCTGA...TCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGCTTCGAATGCCTGTGTaGAAACATAGCTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRLRMPV*KHSCPG Trigger: TCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAG...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTGCTGTTCTCCGCCATaGTCACGCATTGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDGLLSQNPEVHRQENCCSPP*SRIAAL Trigger: AAGAGCAGCAATGCGTGATCATGGCGGAGAACAGCA...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGTGGTGGGGTCTGTTGTaGAGCACCAGGGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQWWGLL*STRALA Trigger: AGCCAAGGCCCTGGTGCTTCACAACAGACCCCACCA...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGATGATCACGCATTGCTaGTCTTTGCTGTGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRMITHC*SLLWYW Trigger: CCAGTACCACAGCAAAGAGCAGCAATGCGTGATCAT...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | AACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACACCATCCGGGTTCCTaGAGTAGTTCATCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGHSSDGLLSQNPEVHRHHPGS*SSSSPS Trigger: GCTTGGAGATGAACTACTGCAGGAACCCGGATGGTG...TCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGTCGCTCGGCCCACTTaGTTCCTGGGAAACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPVARPT*FLGNCG Trigger: CCCACAGTTTCCCAGGAACCAAGTGGGCCGAGCGAC...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | AACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGAGCTGTGGTACTGGAATaGCCTGCAGACAAAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NKGHSSDGLLSQNPEVHRAVVLE*PADKVC Trigger: ACAGACTTTGTCTGCAGGTCATTCCAGTACCACAGC...TCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAGGTACTGGAATGACCTaGAGACAAAGTCTGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKGTGMT*RQSLFP Trigger: GGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACC...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTGCCATTCCCATACATaGAGTCTGTCTCAGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDGLLSQNPEVHRQENCHSHT*SLSQSR Trigger: GCGACTCTGAGACAGACTGCATGTATGGGAATGGCA...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAACTCCCTCCTGTCTCTaGGCACCGCTTCAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIFNKGHSSDGLLSQNPETPSCL*APLQVA Trigger: TGCAACCTGAAGCGGTGCTCAGAGACAGGAGGGAGT...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAACGAGACACCTCCTGCTaGGAGCTGCTTCTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIFNKGHSSDGLLSQNPERDTSC*ELLLGE Trigger: CTCACCAAGAAGCAGCTCGCAGCAGGAGGTGTCTCG...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGTGGTCTTGGAGATTTTaGCCTCATACTTTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRWSWRF*PHTFLH Trigger: GTGGAGAAAAGTATGAGGGCAAAATCTCCAAGACCA...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTGTTCTTTTCCAGACCTaGCCGTGGGTTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDGLLSQNPEVHRQENFVLFQT*PWVCLW Trigger: CCACAGACAAACCCACGGGCAGGTCTGGAAAAGAAC...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCAGTCAAGTCCAGACATaGTCTTGGAGATTTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPSQVQT*SWRFCP Trigger: AGGGCAAAATCTCCAAGACCATGTCTGGACTTGACT...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGGCCCACTTGGTTCCTaGGAAACTGTGGGCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPGPLGS*ETVGNS Trigger: GGAATTGCCCACAGTTTCCCAGGAACCAAGTGGGCC...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGTTCCAGACCTGCCCGTaGGTTTGTCTGTGGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQFQTCP*VCLWGE Trigger: TTCACCCCACAGACAAACCCACGGGCAGGTCTGGAA...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCATTCACATCCCCATCTaGGTTTCGGCAGTAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPIHIPI*VSAVVL Trigger: AAGAACTACTGCCGAAACCCAGATGGGGATGTGAAT...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGGTATCCATGAGCATGTaGGCTCTGAGAATCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQVSMSM*ALRIPG Trigger: GCCTGGGATTCTCAGAGCCCACATGCTCATGGATAC...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTAGCAGTTTCTCCATCTaGGTTCCGGCAGTAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSDGLLSQNPEVHRQENFSSFSI*VPAVVL Trigger: GAGAACTACTGCCGGAACCCAGATGGAGAAACTGCT...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCACTCCAAGCCAGCATCTaGGAAGTTCTCTGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPLQASI*EVLWGL Trigger: AAGACCCCAGAGAACTTCCCAGATGCTGGCTTGGAG...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTGTTCCTGGGAAACTGTaGGCAATTCCACAACACTCC | + |
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Preference number: 4 (lower is better) Translates to: SSDGLLSQNPEVHRQENFVPGKL*AIPQHS Trigger: GGAGTGTTGTGGAATTGCCCACAGTTTCCCAGGAAC...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR TCA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAGTAGAATTCAGGTCTTaGAGATTTCTCCAAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKVEFRS*RFLQTV Trigger: CACTGTTTGGAGAAATCTTCAAGACCTGAATTCTAC...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGTGTGGAAACATAGCTaGCCAGGACTGGCACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPVWKHS*PGLALL Trigger: AAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACAC...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTCTTCTAGTCCCTCATTaGGATGTGTACTGGGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSDGLLSQNPEVHRQENFLLVPH*DVYWES Trigger: ACTCTCCCAGTACACATCCCAATGAGGGACTAGAAG...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCTTGTTCATCATTGTCTaGGTTCCTACAGTAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPLFIIV*VPTVVL Trigger: GAGAACTACTGTAGGAACCCAGACAATGATGAACAA...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAGTCATAAAGTTTTCTaGGGTTTGTTGTATAGCACC | + |
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Preference number: 4 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRSHKVF*GLLYST Trigger: GGTGCTATACAACAAACCCCAGAAAACTTTATGACT...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCACGGATATATTCTTCGTaGGCACCCAGGATAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPRIYSS*APRITL Trigger: CAAGGTTATCCTGGGTGCGCACGAAGAATATATCCG...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGCGAGTCCCCTTGTCCTaGTTTCAGAAGCAAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQRVPLS*FQKQEK Trigger: TTTCTCTTGCTTCTGAAACCAGGACAAGGGGACTCG...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGCAGGGGAAATTTTCTaGTGTCCTGTTGTGCCTATG | + |
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Preference number: 4 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPAGEIF*CPVVPM Trigger: CATAGGCACAACAGGACACCAGAAAATTTCCCCTGC...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR CCA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGTCTTTGCTGTGGTACTaGAATGACCTGCAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQSLLWY*NDLQTK Trigger: CTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGA...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS-3UTR GCA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAACTCCACTGCAGTACATaGATTCCTCTTCACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: FIFNKGHSSDGLLSQNPELHCST*IPLHIQ Trigger: CTGAATGTGAAGAGGAATGCATGTACTGCAGTGGAG...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CCA 90 bp | GGAACGTGGCACCCCACTTTTGACAGGCAACACCACTCTTTGTCCTaGACATGGTTCCTCTGTAGCCGTTGCCGATGCCGGTCTTACATT | + |
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Preference number: 5 (lower is better) Translates to: GTWHPTFDRQHHSLS*TWFLCSRCRCRSYI Trigger: AATGTAAGACCGGCATCGGCAACGGCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGTGGGGTGCCACGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CCA 90 bp | CAAGCCAGCATCTGGGAAGTTCTCTGGGGTCTTCGAATGCCTGTGTaGAAACATAGCTGCCCAGGACTGGCACTTCTTCCCTGTGATGGT | + |
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Preference number: 5 (lower is better) Translates to: QASIWEVLWGLRMPV*KHSCPGLALLPCDG Trigger: ACCATCACAGGGAAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAGAACTTCCCAGATGCTGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS GCA 90 bp | TGGGAAGTTCTCTGGGGTCTTCGAATGCCTGTGTGGAAACATAGCTaGCCAGGACTGGCACTTCTTCCCTGTGATGGTAGTGGACGATGT | + |
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Preference number: 5 (lower is better) Translates to: WEVLWGLRMPVWKHS*PGLALLPCDGSGRC Trigger: ACATCGTCCACTACCATCACAGGGAAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAGAACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS GCA 90 bp | TTCATCTCCAAGCCAGCATCTGGGAAGTTCTCTGGGGTCTTCGAATaGCTGTGTGGAAACATAGCTGCCCAGGACTGGCACTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FISKPASGKFSGVFE*LCGNIAAQDWHFFP Trigger: AGGGAAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAGAACTTCCCAGATGCTGGCTTGGAGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | GGTACTGGAATGACCTGCAGACAAAGTCTGTTTCCCCTTCACATTTaGCCAAACAGTCCGAGACACCTCCTGCTGCGAGCTGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGMTCRQSLFPLHI*PNSPRHLLLRAASW Trigger: CCAAGAAGCAGCTCGCAGCAGGAGGTGTCTCGGACTGTTTGGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | TGGCACCCCACTTTTGACAGGCAACACCACTCTTTGTCCTGGACATaGTTCCTCTGTAGCCGTTGCCGATGCCGGTCTTACATTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: WHPTFDRQHHSLSWT*FLCSRCRCRSYILT Trigger: TGTCAGAATGTAAGACCGGCATCGGCAACGGCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGTGGGGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | TGGACCACAGGTGTTTGCTCCTCTGGTGGAACTGAGGAATCTGACTaGTCTGGTGATGCTGAGGACTCGCAGGATGGAATCTCACAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WTTGVCSSGGTEESD*SGDAEDSQDGISQY Trigger: GTACTGTGAGATTCCATCCTGCGAGTCCTCAGCATCACCAGACCAGTCAGATTCCTCAGTTCCACCAGAGGAGCAAACACCTGTGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAATCAGACATTGGTAGGTaGGGCTGGGTGGGGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKSDIGR*GWVGAG Trigger: CCCCGCCCCCACCCAGCCCAACCTACCAATGTCTGA...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | GGTTCCTACAGTAGTTCTCTTCTAGTCCCTCATTGGGATGTGTACTaGGAGAGTAGTTGGGTACGTGGGGGAACGTGGCACCCCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSYSSSLLVPHWDVY*ESSWVRGGTWHPTF Trigger: AAAAGTGGGGTGCCACGTTCCCCCACGTACCCAACTACTCTCCCAGTACACATCCCAATGAGGGACTAGAAGAGAACTACTGTAGGAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | CTGTTCTCCGCCATGATCACGCATTGCTGCTCTTTGCTGTGGTACTaGAATGACCTGCAGACAAAGTCTGTTTCCCCTTCACATTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFSAMITHCCSLLWY*NDLQTKSVSPSHLA Trigger: GGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGCGGAGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | CATCATTGTCTGGGTTCCTACAGTAGTTCTCTTCTAGTCCCTCATTaGGATGTGTACTGGGAGAGTAGTTGGGTACGTGGGGGAACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HHCLGSYSSSLLVPH*DVYWESSWVRGGTW Trigger: CCACGTTCCCCCACGTACCCAACTACTCTCCCAGTACACATCCCAATGAGGGACTAGAAGAGAACTACTGTAGGAACCCAGACAATGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS GCA 90 bp | AGGCAACACCACTCTTTGTCCTGGACATGGTTCCTCTGTAGCCGTTaGCGATGCCGGTCTTACATTCTGACAGATACACTCTCTTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RQHHSLSWTWFLCSR*RCRSYILTDTLSFR Trigger: TCGAAAAGAGAGTGTATCTGTCAGAATGTAAGACCGGCATCGGCAACGGCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 90 bp | GTCTTGCTGTTCTCCGCCATGATCACGCATTGCTGCTCTTTGCTGTaGTACTGGAATGACCTGCAGACAAAGTCTGTTTCCCCTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLFSAMITHCCSLL*YWNDLQTKSVSPSH Trigger: ATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGCGGAGAACAGCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATAGTCGCTCGGCCCACTaGGTTCCTGGGAAACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSDGLLSQNPEVHRQENSRSAH*VPGKLW Trigger: CCACAGTTTCCCAGGAACCAAGTGGGCCGAGCGACT...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS TCA 90 bp | TCACGGTTGTTGGGCTCCAAGATCAGTTTGGCTACTGATATTTCCTaGACATCCAACCCACGGATATATTCTTCGTGCGCACCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SRLLGSKISLATDIS*TSNPRIYSSCAPRI Trigger: TATCCTGGGTGCGCACGAAGAATATATCCGTGGGTTGGATGTTCAGGAAATATCAGTAGCCAAACTGATCTTGGAGCCCAACAACCGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCCGCCATGATCACGCATaGCTGCTCTTTGCTGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPRHDHA*LLFAVV Trigger: TACCACAGCAAAGAGCAGCAATGCGTGATCATGGCG...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | AAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGGTGGATTTGACTCTGTaGTTCAGATACTCGACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTAVMVYCHKIQKSTDRVDLTL*FRYSTR Trigger: CCGCGTCGAGTATCTGAACAACAGAGTCAAATCCAC...CCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATATCCAGCGAGTCCCCTaGTCCTGGTTTCAGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSSDGLLSQNPEVHRQENIQRVP*SWFQKQ Trigger: TTGCTTCTGAAACCAGGACAAGGGGACTCGCTGGAT...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCTCTTCTAGTCCCTCATaGGGATGTGTACTGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPSSSPS*GCVLGE Trigger: CTCTCCCAGTACACATCCCAATGAGGGACTAGAAGA...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCGTAGCACCAAGGCCCTaGTTCATCATTGTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPVAPRP*FIIVWV Trigger: AACCCAGACAATGATGAACAAGGGCCTTGGTGCTAC...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCAGATACTCGACGCGGTaGCACACCTTGTTCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPRYSTR*HTLFSI Trigger: GATTGAGAACAAGGTGTGCAACCGCGTCGAGTATCT...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATGCAATGTCACGGTTGTaGGGCTCCAAGATCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSDGLLSQNPEVHRQENAMSRL*GSKISL Trigger: CAAACTGATCTTGGAGCCCAACAACCGTGACATTGC...ATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | GTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAATCTTCAGGTTCTTGCTaGGAAATTTGGCAGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VTAVMVYCHKIQKSTDRKSSGSC*EIWQGC Trigger: ACATCCCTGCCAAATTTCCAAGCAAGAACCTGAAGA...TTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCTTCATCTTCAGGTTCTaGCTTGGAAATTTGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPFIFRF*LGNLAG Trigger: CCCTGCCAAATTTCCAAGCAAGAACCTGAAGATGAA...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTCCACAGACAGGAAAATTTTCAGTATTCCCAGCGTTaGGTGGGGTCTGTTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSDGLLSQNPEVHRQENFQYSQR*VGSVVK Trigger: CTTCACAACAGACCCCACCAAACGCTGGGAATACTG...AAAATTTTCCTGTCTGTGGACTTCTGGATTTTGTGACAATAGACCATCACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTTCAGTGTAGTGTCCCAGTTTGATTACTGTCAGTTTTTCCAAACACCCATGGTCTTGGAGATTTaGCCCTCATACTTTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWFSVVSQFDYCQFFQTPMVLEI*PSYFSP Trigger: TGGAGAAAAGTATGAGGGCAAAATCTCCAAGACCAT...GGGTGTTTGGAAAAACTGACAGTAATCAAACTGGGACACTACACTGAACCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAAGGGCAATGTCACGGTaGTTGGGCTCCAAGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPRAMSR*LGSKIS Trigger: ACTGATCTTGGAGCCCAACAACCGTGACATTGCCCT...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAATCTTCCTTTCAGACATaGGTAGGTTGGGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIFNKGHSSDGLLSQNPESSFQT*VGWAGW Trigger: CCACCCAGCCCAACCTACCAATGTCTGAAAGGAAGA...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAAGTTTCCCCTTCACATTaGGCCAAACAGTCCGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FIFNKGHSSDGLLSQNPEVSPSH*AKQSET Trigger: TGTCTCGGACTGTTTGGCCAAATGTGAAGGGGAAAC...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAAGTCCAGACATGGTCTaGGAGATTTTGCCCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPSPDMV*EILPSY Trigger: GTATGAGGGCAAAATCTCCAAGACCATGTCTGGACT...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGGTTTTCTGGGGTTTGTaGTATAGCACCAAGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLFSTKVTAVMVYCHKIQVFWGL*YSTKDH Trigger: ATGGTCCTTGGTGCTATACAACAAACCCCAGAAAAC...CTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAAAAGTTTTCTGGGGTTaGTTGTATAGCACCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EFIFNKGHSSDGLLSQNPKVFWG*LYSTKD Trigger: GTCCTTGGTGCTATACAACAAACCCCAGAAAACTTT...TGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTCAACAAAGGTCACAGCAGTGATGGTCTATTGTCACAAAATCCAGAATGTAGAATTCAGGTCTaGAAGATTTCTCCAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: FIFNKGHSSDGLLSQNPECRIQV*KISPNS Trigger: ACTGTTTGGAGAAATCTTCAAGACCTGAATTCTACA...TTCTGGATTTTGTGACAATAGACCATCACTGCTGTGACCTTTGTTGAAAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | CACCCCACTTTTGACAGGCAACACCACTCTTTGTCCTaGACATGGTTCCTCTGTAGCCGTTGCCGATGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: HPTFDRQHHSLS*TWFLCSRCRCR Trigger: CCGGCATCGGCAACGGCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS TCA 72 bp | GCTCACTCCAGCGCTGACAGGTTTTCCCAGACACGGTaGCAGACACGGTCCCTCGGTAATTTTCACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AHSSADRFSQTR*QTRSLGNFHLF Trigger: GAAGAGGTGAAAATTACCGAGGGACCGTGTCTGTCACCGTGTCTGGGAAAACCTGTCAGCGCTGGAGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CAA 72 bp | GTAGTTGGGTACGTGGGGGAACGTGGCACCCCACTTTaGACAGGCAACACCACTCTTTGTCCTGGACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVGYVGERGTPL*TGNTTLCPGHG Trigger: ACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGTGGGGTGCCACGTTCCCCCACGTACCCAACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CAA 90 bp | ACTGGGAGAGTAGTTGGGTACGTGGGGGAACGTGGCACCCCACTTTaGACAGGCAACACCACTCTTTGTCCTGGACATGGTTCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGRVVGYVGERGTPL*TGNTTLCPGHGSSV Trigger: TACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGTGGGGTGCCACGTTCCCCCACGTACCCAACTACTCTCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS GCA 72 bp | CTCTGGGGTCTTCGAATGCCTGTGTGGAAACATAGCTaGCCAGGACTGGCACTTCTTCCCTGTGATGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWGLRMPVWKHS*PGLALLPCDGS Trigger: ACTACCATCACAGGGAAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | GGTGTTTGCTCCTCTGGTGGAACTGAGGAATCTGACTaGTCTGGTGATGCTGAGGACTCGCAGGATGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: GVCSSGGTEESD*SGDAEDSQDGI Trigger: GATTCCATCCTGCGAGTCCTCAGCATCACCAGACCAGTCAGATTCCTCAGTTCCACCAGAGGAGCAAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | ATCTGGGAAGTTCTCTGGGGTCTTCGAATGCCTGTGTaGAAACATAGCTGCCCAGGACTGGCACTTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IWEVLWGLRMPV*KHSCPGLALLP Trigger: GGGAAGAAGTGCCAGTCCTGGGCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAGAACTTCCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS GCA 72 bp | GAGGAAGTCTTGCTGTTCTCCGCCATGATCACGCATTaGTGCTCTTTGCTGTGGTACTGGAATGACCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EEVLLFSAMITH*CSLLWYWNDLQ Trigger: CTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGCGGAGAACAGCAAGACTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | ATGACCTGCAGACAAAGTCTGTTTCCCCTTCACATTTaGCCAAACAGTCCGAGACACCTCCTGCTGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MTCRQSLFPLHI*PNSPRHLLLRA Trigger: AGCTCGCAGCAGGAGGTGTCTCGGACTGTTTGGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | ACTTTTGACAGGCAACACCACTCTTTGTCCTGGACATaGTTCCTCTGTAGCCGTTGCCGATGCCGGTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: TFDRQHHSLSWT*FLCSRCRCRSY Trigger: GTAAGACCGGCATCGGCAACGGCTACAGAGGAACCATGTCCAGGACAAAGAGTGGTGTTGCCTGTCAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | AGTAGTTCTCTTCTAGTCCCTCATTGGGATGTGTACTaGGAGAGTAGTTGGGTACGTGGGGGAACGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLLVPHWDVY*ESSWVRGGTWH Trigger: GTGCCACGTTCCCCCACGTACCCAACTACTCTCCCAGTACACATCCCAATGAGGGACTAGAAGAGAACTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CAA 72 bp | AATGACCTGCAGACAAAGTCTGTTTCCCCTTCACATTaGGCCAAACAGTCCGAGACACCTCCTGCTGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NDLQTKSVSPSH*AKQSETPPAAS Trigger: GCTCGCAGCAGGAGGTGTCTCGGACTGTTTGGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CAA 90 bp | TGGTACTGGAATGACCTGCAGACAAAGTCTGTTTCCCCTTCACATTaGGCCAAACAGTCCGAGACACCTCCTGCTGCGAGCTGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WYWNDLQTKSVSPSH*AKQSETPPAASCFL Trigger: CAAGAAGCAGCTCGCAGCAGGAGGTGTCTCGGACTGTTTGGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS GCA 72 bp | GAAGTCTTGCTGTTCTCCGCCATGATCACGCATTGCTaGTCTTTGCTGTGGTACTGGAATGACCTGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: EVLLFSAMITHC*SLLWYWNDLQT Trigger: TGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGCGGAGAACAGCAAGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | CTGGGTTCCTACAGTAGTTCTCTTCTAGTCCCTCATTaGGATGTGTACTGGGAGAGTAGTTGGGTACGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGSYSSSLLVPH*DVYWESSWVRG Trigger: CCCACGTACCCAACTACTCTCCCAGTACACATCCCAATGAGGGACTAGAAGAGAACTACTGTAGGAACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | GTAGTTCATCTCCAAGCCAGCATCTGGGAAGTTCTCTaGGGTCTTCGAATGCCTGTGTGGAAACATAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VVHLQASIWEVL*GLRMPVWKHSC Trigger: GCAGCTATGTTTCCACACAGGCATTCGAAGACCCCAGAGAACTTCCCAGATGCTGGCTTGGAGATGAACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS GCA 72 bp | CGCATTGCTGCTCTTTGCTGTGGTACTGGAATGACCTaGAGACAAAGTCTGTTTCCCCTTCACATTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RIAALCCGTGMT*RQSLFPLHIWP Trigger: TGGCCAAATGTGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
||
| CDS CCA 72 bp | GCCATGATCACGCATTGCTGCTCTTTGCTGTGGTACTaGAATGACCTGCAGACAAAGTCTGTTTCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AMITHCCSLLWY*NDLQTKSVSPS Trigger: TGAAGGGGAAACAGACTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CCA 72 bp | AATCCCAGGCCTGGCAGTCAAGTCCAGACATGGTCTTaGAGATTTTGCCCTCATACTTTTCTCCACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: NPRPGSQVQTWS*RFCPHTFLHCS Trigger: ACTGCAGTGGAGAAAAGTATGAGGGCAAAATCTCCAAGACCATGTCTGGACTTGACTGCCAGGCCTGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CCA 72 bp | GGCGGCTTAGTTTCAGCAGGGCAATGTCACGGTTGTTaGGCTCCAAGATCAGTTTGGCTACTGATATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GGLVSAGQCHGC*APRSVWLLIFP Trigger: AGGAAATATCAGTAGCCAAACTGATCTTGGAGCCCAACAACCGTGACATTGCCCTGCTGAAACTAAGCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CAA 72 bp | CCCTTGTGTGCTTATGTAGCCATCCAGCGAGTCCCCTaGTCCTGGTTTCAGAAGCAAGAGAAACAGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: PLCAYVAIQRVP*SWFQKQEKQKD Trigger: ATCCTTCTGTTTCTCTTGCTTCTGAAACCAGGACAAGGGGACTCGCTGGATGGCTACATAAGCACACAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CAA 72 bp | TTGCTGTTCTCCGCCATGATCACGCATTGCTGCTCTTaGCTGTGGTACTGGAATGACCTGCAGACAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLFSAMITHCCS*LWYWNDLQTKS Trigger: AGACTTTGTCTGCAGGTCATTCCAGTACCACAGCAAAGAGCAGCAATGCGTGATCATGGCGGAGAACAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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| CDS CCA 72 bp | TGTGCTTATGTAGCCATCCAGCGAGTCCCCTTGTCCTaGTTTCAGAAGCAAGAGAAACAGAAGGATTACTTC | + |
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Preference number: 6 (lower is better) Translates to: CAYVAIQRVPLS*FQKQEKQKDYF Trigger: GAAGTAATCCTTCTGTTTCTCTTGCTTCTGAAACCAGGACAAGGGGACTCGCTGGATGGCTACATAAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014578.7 |
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