Pregenerated sensors for PLEKHS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035818Ensembl transcript IDs: ENSMUST00000039666.8, ENSMUST00000178590.9, ENSMUST00000225909.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTaGGTTGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGACACAC | + |
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Preference number: 1 (lower is better) Translates to: HLGWIQLQTSSASHS*VAEPQEVSGRVATH Trigger: GTGTGTCGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR TCA 90 bp | TCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTaGCTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SLFHVGPVAPLLIQW*LRDRCSLVSSHTAV Trigger: CACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTCACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR TCA 90 bp | AGATTTGTGGTTCTGTTCCCCGAACCGCTCAGAACTCAAGAGTCATaGAGATCGAGTATCACTATCTTCCAAAGCCTTCATTTCTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RFVVLFPEPLRTQES*RSSITIFQSLHFFP Trigger: GGGGAAGAAATGAAGGCTTTGGAAGATAGTGATACTCGATCTTCATGACTCTTGAGTTCTGAGCGGTTCGGGGAACAGAACCACAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR GCA 90 bp | CAGTTGTACATGGCACTTTATTTATTTCCATGGTTTATGTACACATaGACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACT | + |
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Preference number: 1 (lower is better) Translates to: QLYMALYLFPWFMYT*TFHTGNNLDNRTRT Trigger: AGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGTGCATGTGTACATAAACCATGGAAATAAATAAAGTGCCATGTACAACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR CAA 90 bp | TTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTaGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGACACACGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAGYSSKLPQLPTPG*LSHRKCLGGLRHTF Trigger: GAACGTGTGTCGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | CATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTCAGGGATTTACTGAATaGTGTCTGCCGTGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HLGWIQLQTSSASHSWVAQGFTE*CLPCLG Trigger: CCCCAGACACGGCAGACATCATTCAGTAAATCCCTG...AGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGGCCAGGGAAATGTTCTTTCTAAAGCTGATACCAGATTTGTGGTTCTGTCACACGGCTGTGTGTaGCCCAGGTTCCATCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GKGQGNVLSKADTRFVVLSHGCV*PRFHPS Trigger: AGAAGGATGGAACCTGGGCCACACACAGCCGTGTGA...CAGAACCACAAATCTGGTATCAGCTTTAGAAAGAACATTTCCCTGGCCTTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | CTCACTGCCTCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTCAGCTTCCCACTCCTaGGTTGCTGAGCCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LTASLSFLITERPLILLASASHS*VAEPQE Trigger: TTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGA...AGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGAGGCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGCTGTTAATTCAGTGGTaGCTCAGAGACAGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RDLLNDVCRVWGRISDNQLLIQW*LRDRCS Trigger: GCTGCATCTGTCTCTGAGTCACCACTGAATTAACAG...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGGCCACAGGAAGTGTCTaGGAGGGTTGCGACACACGT | + |
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Preference number: 2 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWATGSV*EGCDTR Trigger: ACGTGTGTCGCAACCCTCCCAGACACTTCCTGTGGC...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGGCCAGGGAAATGTTCTTTCTAAAGCTGATACCAGATTTGTGGTTCTGCTGTTAATTCAGTGGTaGCTCAGAGACAGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GKGQGNVLSKADTRFVVLLLIQW*LRDRCS Trigger: GCTGCATCTGTCTCTGAGTCACCACTGAATTAACAG...CAGAACCACAAATCTGGTATCAGCTTTAGAAAGAACATTTCCCTGGCCTTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | CACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTGCGAGTTCATTTCTTCCCCCTaGAAGGACAGCCTGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: HTGNNLDNRTRTECLLCEFISSP*KDSLLR Trigger: TCTTAGCAGGCTGTCCTTTCAGGGGGAAGAAATGAA...CTCGCAGAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR GCA 90 bp | CTCACTGCCTCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTACTGAATGATGTCTaGCGTGTCTGGGGCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: LTASLSFLITERPLILLALLNDV*RVWGRI Trigger: GATTCTGCCCCAGACACGGCAGACATCATTCAGTAA...AGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGAGGCAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGTCACACGGCTGTGTGTaGCCCAGGTTCCATCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWSHGCV*PRFHPS Trigger: AGAAGGATGGAACCTGGGCCACACACAGCCGTGTGA...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGGAAGAGCCAGCTGTGTaGACTGTGACCTCGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWEEPAV*TVTSEA Trigger: TGCTTCCGAGGTCACAGTCCACACAGCTGGCTCTTC...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCCTGATACCAGATTTGTaGTTCTGTTCCCCGAACCGC | + |
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Preference number: 2 (lower is better) Translates to: TFHTGNNLDNRTRTECLLLIPDL*FCSPNR Trigger: GCGGTTCGGGGAACAGAACCACAAATCTGGTATCAG...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGGCCAGGGAAATGTTCTTTCTAAAGCTGATACCAGATTTGTGGTTCTGTTACTGAAAGGCCTTTaGTTCTTTTGGCTTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GKGQGNVLSKADTRFVVLLLKGL*FFWLCR Trigger: TCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAA...CAGAACCACAAATCTGGTATCAGCTTTAGAAAGAACATTTCCCTGGCCTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGGATGTCTGCCGTGTCTaGGGCAGAATCTCAGATAAT | + |
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Preference number: 2 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWDVCRV*GRISDN Trigger: ATTATCTGAGATTCTGCCCCAGACACGGCAGACATC...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR-3UTR TCA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTTGGCTTTGCAGAATTaGTTTGGCAATAAACCAATC | + |
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Preference number: 2 (lower is better) Translates to: TFHTGNNLDNRTRTECLLLALQN*FGNKPI Trigger: GATTGGTTTATTGCCAAATCAATTCTGCAAAGCCAA...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR CCA 72 bp | CAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTaGCCCAGGTTCCATCCTTCTGTGTCCTGGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: QMQPCLQSHGCV*PRFHPSVSWAC Trigger: GCAGGCCCAGGACACAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR TCA 72 bp | GCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTaGGCCACAGGAAGTGTCTGGGAGGGTTGCGACACA | + |
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Preference number: 3 (lower is better) Translates to: APNFLSFPLLGC*ATGSVWEGCDT Trigger: TGTGTCGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR TCA 72 bp | CATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTaGCTCAGAGACAGATGCAGCCTTGTCTCCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: HVGPVAPLLIQW*LRDRCSLVSSH Trigger: GTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTCACCACTGAATTAACAGTGGGGCCACTGGCCCCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR GCA 72 bp | AGTGTCTGGGAGGGTTGCGACACACGTTCACTCTCTTaGATCCCTGAAATGATATGGCTAACGAAGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SVWEGCDTRSLS*IPEMIWLTKSQ Trigger: CTGGCTCTTCGTTAGCCATATCATTTCAGGGATGCAAGAGAGTGAACGTGTGTCGCAACCCTCCCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| 3UTR GCA 72 bp | AATCTAGATAACAGAACACGTACTGAATGTCTCCTCTaGGAGCCAAAGGTCTTTACTAAGCTAAACCCACAC | + |
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Preference number: 3 (lower is better) Translates to: NLDNRTRTECLL*EPKVFTKLNPH Trigger: GTGTGGGTTTAGCTTAGTAAAGACCTTTGGCTCGCAGAGGAGACATTCAGTACGTGTTCTGTTATCTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTGCCGCTGTCCTGGTaGGGAGGCCCCAGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DSETDAALSPVTRLCVAQVPLSW*GGPSSD Trigger: GTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCAC...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCCCACTCCTGGGTTGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGGCACAGGGGGAAGCGTaGAGCTTCTCTGAGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SASHSWVAEPQEVSGRVAAQGEA*SFSEFG Trigger: CCCAAACTCAGAGAAGCTCCACGCTTCCCCCTGTGC...CGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR TCA 90 bp | TTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTGAGCGGGAGGCCCCAGCTCTaGCTCTGTCTGGAATTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LAGYSSKLPQLPTPGLLSGRPQL*LCLEFR Trigger: GCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCC...GCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | ATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGGCCCAAGAAAGGACTaGGGTCGGAAACTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: MQPCLQSHGCVWPRFHPSGPRKD*GRKLAF Trigger: GAAGGCCAGTTTCCGACCCCAGTCCTTTCTTGGGCC...AGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR GCA 90 bp | TGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGCACACAGATCTGTCCTaGTGCTTCTACCAGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: CSLVSSHTAVCGPGSILLHTDLS*CFYQSE Trigger: CTCGCTCTGGTAGAAGCAGCAGGACAGATCTGTGTG...CAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGGTGCCGCTGTCCTGGTaGGGAGGCCCCAGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQVPLSW*GGPSSD Trigger: GTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCAC...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGTGTAAATTGTTTGCCTaGGCCTTTTGGAGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: DSETDAALSPVTRLCVAQCKLFA*AFWRSG Trigger: GCCAGACCTCCAAAAGGCCCAGGCAAACAATTTACA...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGGCTCTCTTGAAACCTTaGTCCGGACTATTGGATTCG | + |
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Preference number: 4 (lower is better) Translates to: CSLVSSHTAVCGPGSILLALLKP*SGLLDS Trigger: CGAATCCAATAGTCCGGACCAAGGTTTCAAGAGAGC...CAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGTTGGGATCCGGCCAATaGAGAGTTTCACTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DSETDAALSPVTRLCVAQLGSGQ*RVSLSP Trigger: AGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAA...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | CATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTCCCGTTCCCCGACTCTaGGACAGAATAAAAAGACGC | + |
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Preference number: 4 (lower is better) Translates to: HLGWIQLQTSSASHSWVAPVPRL*DRIKRR Trigger: GCGTCTTTTTATTCTGTCCCAGAGTCGGGGAACGGG...AGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGTGTCCTGGCTCTCTTGAAACCTTaGTCCGGACTATTGGATTCG | + |
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Preference number: 4 (lower is better) Translates to: LSPVTRLCVAQVPSFCVLALLKP*SGLLDS Trigger: CGAATCCAATAGTCCGGACCAAGGTTTCAAGAGAGC...CAGGACACAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | CACATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGACCTCCTCCAGGCTTTaGGGTTTCAGGTCATTCACG | + |
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Preference number: 4 (lower is better) Translates to: HILAGYSSKLPQLPTPGLTSSRL*GFRSFT Trigger: CGTGAATGACCTGAAACCCCAAAGCCTGGAGGAGGT...CAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR GCA 90 bp | TTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTGAGCTGCTCTCTGATGGGTTaGTTTAACACCCTGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LAGYSSKLPQLPTPGLLSCSLMG*FNTLAV Trigger: TACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCA...GCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGGGCCCAAGAAAGGACTaGGGTCGGAAACTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVGPRKD*GRKLAF Trigger: GAAGGCCAGTTTCCGACCCCAGTCCTTTCTTGGGCC...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCCCACTCCTGGGTTGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGTTCACTTTCTCCTTCTaGATACATCGGGTAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SASHSWVAEPQEVSGRVAFTFSF*IHRVRN Trigger: GTTTCTTACCCGATGTATCCAGAAGGAGAAAGTGAA...CGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTGAGCTTGGGATCCGGCCAATaGAGAGTTTCACTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LAGYSSKLPQLPTPGLLSLGSGQ*RVSLSP Trigger: AGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAA...GCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGGGCAGGGCTCCTCTTTaGTGTCCTCTCCAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVGRAPL*CPLQFW Trigger: CCAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCC...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR GCA 90 bp | CATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTTGCTCTCTGATGGGTTaGTTTAACACCCTGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: HLGWIQLQTSSASHSWVACSLMG*FNTLAV Trigger: TACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCA...AGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGAGTCACCAGAATCATTaGGTCCAGCAATATTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: DSETDAALSPVTRLCVAQSHQNH*VQQYSL Trigger: TAGAGAATATTGCTGGACCCAATGATTCTGGTGACT...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTGCAGAATCCTGTGCCGCTGTCCTaGTGGGGAGGCCCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSFLITERPLILLALQNPVPLS*WGGPSS Trigger: AGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGG...ATTCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCCCTGTGCCGCTGTCCTaGTGGGGAGGCCCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFHTGNNLDNRTRTECLLPVPLS*WGGPSS Trigger: AGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGG...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGCCCGTTCCCCGACTCTaGGACAGAATAAAAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVPVPRL*DRIKRR Trigger: GCGTCTTTTTATTCTGTCCCAGAGTCGGGGAACGGG...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGTTCTCCTCTGCTCTCTaGTGGGTTGCTTTAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVFSSAL*WVALTP Trigger: GGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAA...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGCCTTCTGACTCTTTTTaGTGGCAGGGCTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVPSDSF*WQGSSL Trigger: CAAAGAGGAGCCCTGCCATCAAAAAGAGTCAGAAGG...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR GCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGCACACAGATCTGTCCTaGTGCTTCTACCAGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQHTDLS*CFYQSE Trigger: CTCGCTCTGGTAGAAGCAGCAGGACAGATCTGTGTG...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGCTGTGGTCTGGGCTTTaGAATTGGGAGGTGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVLWSGL*NWEVKD Trigger: GTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAG...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCATCTGGGTGGCACTTaGACATCTTCTGCACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSVLTLLLSHYFMWGQWPHLGGT*TSSAQI Trigger: AATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATG...GGGCCACTGGCCCCACATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGGGGAGGCCCCAGCTCTaGCTCTGTCTGGAATTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQIISPSVLTLLLSHYFMGRPQL*LCLEFR Trigger: GCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCC...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGCCTTCTGACTCTTTTTaGTGGCAGGGCTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQPSDSF*WQGSSL Trigger: CAAAGAGGAGCCCTGCCATCAAAAAGAGTCAGAAGG...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGATCACCTCATCTGGGTaGCACTTGAACATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVITSSG*HLNIFC Trigger: GCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGAT...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGCCTTTTGGTCATCTGTaGTCTGGGCTTTGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVPFGHL*SGLWNW Trigger: CCAATTCCAAAGCCCAGACCACAGATGACCAAAAGG...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGCATCTGGGTGGCACTTaGACATCTTCTGCACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQHLGGT*TSSAQI Trigger: AATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATG...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGTTTGGAATTGGGAGGTaGAAGACATGGATCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVFGIGR*KTWITS Trigger: GGAAGTGATCCATGTCTTTCACCTCCCAATTCCAAA...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGTGTAAATTGTTTGCCTaGGCCTTTTGGAGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQCKLFA*AFWRSG Trigger: GCCAGACCTCCAAAAGGCCCAGGCAAACAATTTACA...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCTCTGGGCTTTGGAATTaGGAGGTGAAAGACATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVLTLLLSHYFMWGQWPSGLWN*EVKDMD Trigger: ATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGA...GGGCCACTGGCCCCACATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | CTCACTGCCTCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTCTGTGGTCTGGGCTTTaGAATTGGGAGGTGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTASLSFLITERPLILLALWSGL*NWEVKD Trigger: GTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAG...AGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGAGGCAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| 3UTR CAA 72 bp | GCCAGGGAAATGTTCTTTCTAAAGCTGATACCAGATTaGTGGTTCTGTTCCCCGAACCGCTCAGAACTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AREMFFLKLIPD*WFCSPNRSELK Trigger: CTTGAGTTCTGAGCGGTTCGGGGAACAGAACCACAAATCTGGTATCAGCTTTAGAAAGAACATTTCCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCCTCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTGGAAAGCTTCTCCTCTaGTCTCTGATGGGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTASLSFLITERPLILLAGKLLL*SLMGCF Trigger: AAAGCAACCCATCAGAGAGCAGAGGAGAAGCTTTCC...AGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGAGGCAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGGCACAGGGGGAAGCGTaGAGCTTCTCTGAGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIISPSVLTLLLSHYFMAQGEA*SFSEFG Trigger: CCCAAACTCAGAGAAGCTCCACGCTTCCCCCTGTGC...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGGGCAGGGCTCCTCTTTaGTGTCCTCTCCAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIISPSVLTLLLSHYFMGRAPL*CPLQFW Trigger: CCAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCC...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | CACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTGCGAGTTTGGAATTGGGAGGTaGAAGACATGGATCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGNNLDNRTRTECLLCEFGIGR*KTWITS Trigger: GGAAGTGATCCATGTCTTTCACCTCCCAATTCCAAA...CTCGCAGAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTGCAGAATCCAGCAGCTTCCTTCTaGCTCTTTTTGATGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFLITERPLILLALQNPAASF*LFLMAG Trigger: CCCTGCCATCAAAAAGAGTCAGAAGGAAGCTGCTGG...ATTCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCACTGTTAATTCAGTGGTGCACTTGAACATCTTCTaGACAGATTGCATCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIISCGASGPTVNSVVHLNIF*TDCIFS Trigger: GGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTG...CACCACTGAATTAACAGTGGGGCCACTGGCCCCACATGAAATAATGACTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | CTCACTGCCTCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTCTGGGCTTTGGAATTaGGAGGTGAAAGACATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTASLSFLITERPLILLASGLWN*EVKDMD Trigger: ATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGA...AGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGAGGCAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTGCAGAATACCTCCTCCAGGCTTTaGGGTTTCAGGTCATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFLITERPLILLALQNTSSRL*GFRSFT Trigger: CGTGAATGACCTGAAACCCCAAAGCCTGGAGGAGGT...ATTCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGCCAGCAGCTTCCTTCTaGCTCTTTTTGATGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIISPSVLTLLLSHYFMPAASF*LFLMAG Trigger: CCCTGCCATCAAAAAGAGTCAGAAGGAAGCTGCTGG...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR GCA 90 bp | AGGGATTTACTGAATGATGTCTGCCGTGTCTGGGGCAGAATCTCAGATAATCAGCACTTGAACATCTTCTaGACAGATTGCATCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLLNDVCRVWGRISDNQHLNIF*TDCIFS Trigger: GGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTG...CTGATTATCTGAGATTCTGCCCCAGACACGGCAGACATCATTCAGTAAATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGAAGCTTCTCCTGCTCTaGTCTCTGATGGGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWKLLLL*SLMGCF Trigger: AAAGCAACCCATCAGAGAGCAGAGCAGGAGAAGCTT...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | CACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTGCGAGAGTCACCAGAATCATTaGGTCCAGCAATATTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HTGNNLDNRTRTECLLCESHQNH*VQQYSL Trigger: TAGAGAATATTGCTGGACCCAATGATTCTGGTGACT...CTCGCAGAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTGCAGAATCCTTTTGGTCATCTGTaGTCTGGGCTTTGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFLITERPLILLALQNPFGHL*SGLWNW Trigger: CCAATTCCAAAGCCCAGACCACAGATGACCAAAAGG...ATTCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTTCACTTTCTCCTTCTaGATACATCGGGTAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFHTGNNLDNRTRTECLLFTFSF*IHRVRN Trigger: GTTTCTTACCCGATGTATCCAGAAGGAGAAAGTGAA...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CCTGTGCCGCTGTCCTGGTGGGGAGGCCCCAGCTCTGACTCTGTCTaGAATTCCGCTTGGCCATCGTTGTCGTCGGCTGATGCAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVPLSWWGGPSSDSV*NSAWPSLSSADAEV Trigger: AACCTCTGCATCAGCCGACGACAACGATGGCCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | TTGGGAGGTGAAAGACATGGATCACTTCCTGTGCCGCTGTCCTGGTaGGGAGGCCCCAGCTCTGACTCTGTCTGGAATTCCGCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGGERHGSLPVPLSW*GGPSSDSVWNSAWP Trigger: TGGCCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGAAGTGATCCATGTCTTTCACCTCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CTCGGGTATGCTGCAGAGGCCCAAGAAAGGACTGGGGTCGGAAACTaGCCTTCTGTCACCCAGGGAAAGCTTCTCCTGCTCTGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGYAAEAQERTGVGN*PSVTQGKLLLLCSL Trigger: CAGAGAGCAGAGCAGGAGAAGCTTTCCCTGGGTGACAGAAGGCCAGTTTCCGACCCCAGTCCTTTCTTGGGCCTCTGCAGCATACCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGTGGCAGGGCTCCTCTTaGGTGTCCTCTCCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSETDAALSPVTRLCVAQWQGSS*VSSPVL Trigger: CAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCCA...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS GCA 90 bp | TCTGGGCTTTGGAATTGGGAGGTGAAAGACATGGATCACTTCCTGTaGCGCTGTCCTGGTGGGGAGGCCCCAGCTCTGACTCTGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGLWNWEVKDMDHFL*RCPGGEAPALTLSG Trigger: TCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGAAGTGATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CTCGGGTATGCTGCAGAGGCCCAAGAAAGGACTGGGGTCGGAAACTaGCCTTCTGTCACCCAGGGAAAGCTTCTCCTCTGCTCTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGYAAEAQERTGVGN*PSVTQGKLLLCSLM Trigger: CATCAGAGAGCAGAGGAGAAGCTTTCCCTGGGTGACAGAAGGCCAGTTTCCGACCCCAGTCCTTTCTTGGGCCTCTGCAGCATACCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
||
| CDS CCA 90 bp | GAATTGGGAGGTGAAAGACATGGATCACTTCCTGTGCCGCTGTCCTaGTGGGGAGGCCCCAGCTCTGACTCTGTCTGGAATTCCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGGERHGSLPVPLS*WGGPSSDSVWNSAW Trigger: CCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGAAGTGATCCATGTCTTTCACCTCCCAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCCCACTCCTGGGTTGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGGTCTGGGCTTTGGAATaGGGAGGTGAAAGACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SASHSWVAEPQEVSGRVAVWALE*GGERHG Trigger: TCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGAC...CGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCCCACTCCTGGGTTGCTGAGCCACAGGAAGTGTCTGGGAGGGTTGCGTCTGTGGTCTGGGCTTaGGAATTGGGAGGTGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SASHSWVAEPQEVSGRVASVVWA*ELGGER Trigger: TCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGA...CGCAACCCTCCCAGACACTTCCTGTGGCTCAGCAACCCAGGAGTGGGAAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CCCAGCAGCTTCCTTCTGACTCTTTTTGATGGCAGGGCTCCTCTTTaGTGTCCTCTCCAGTTCTGGCAAATCCCGCTGGACAGACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSFLLTLFDGRAPL*CPLQFWQIPLDRLS Trigger: GCTGAGTCTGTCCAGCGGGATTTGCCAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCCATCAAAAAGAGTCAGAAGGAAGCTGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGCTGAGCCACCTCCTCCAGGCTTaGGGGTTTCAGGTCATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAGYSSKLPQLPTPGLLSHLLQA*GFQVIH Trigger: GTGAATGACCTGAAACCCCAAAGCCTGGAGGAGGTG...GCTCAGCAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | GACTCAGAGACAGATGCAGCCTTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGTCATCTGGGTGGCACTaGAACATCTTCTGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSETDAALSPVTRLCVAQSSGWH*NIFCTD Trigger: ATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGA...CTGGGCCACACACAGCCGTGTGACTGGAGACAAGGCTGCATCTGTCTCTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS TCA 90 bp | ACTGGCCTTCTGTCACCCAGGGAAAGCTTCTCCTGCTCTGCTCTCTaGTGGGTTGCTTTAACACCCTGGCAGTATGGTGTCATGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPRESFSCSAL*WVALTPWQYGVMKE Trigger: CTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGCAGGAGAAGCTTTCCCTGGGTGACAGAAGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178590.9 |
||
| CDS GCA 90 bp | CCTTCTGTCACCCAGGGAAAGCTTCTCCTCTGCTCTCTGATGGGTTaGTTTAACACCCTGGCAGTATGGTGTCATGAAGGAGACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTQGKLLLCSLMG*FNTLAVWCHEGDPV Trigger: GACTGGGTCTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAAGCTTTCCCTGGGTGACAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
||
| CDS CCA 90 bp | CAGTTAGTGAGGCGGACCCCTTTTGGTCATCTGTGGTCTGGGCTTTaGAATTGGGAGGTGAAAGACATGGATCACTTCCTGTGCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLVRRTPFGHLWSGL*NWEVKDMDHFLCRC Trigger: ACAGCGGCACAGGAAGTGATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS TCA 90 bp | GAAACTGGCCTTCTGTCACCCAGGGAAAGCTTCTCCTCTGCTCTCTaGTGGGTTGCTTTAACACCCTGGCAGTATGGTGTCATGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ETGLLSPRESFSSAL*WVALTPWQYGVMKE Trigger: CTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAAGCTTTCCCTGGGTGACAGAAGGCCAGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
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| CDS TCA 90 bp | TTTGTATTAAATGCTCTGGAAGACTGGCCCTCGGTGATGCAAGTCTaGTACCCTCGGGTATGCTGCAGAGGCCCAAGAAAGGACTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FVLNALEDWPSVMQV*YPRVCCRGPRKDWG Trigger: ACCCCAGTCCTTTCTTGGGCCTCTGCAGCATACCCGAGGGTATCAGACTTGCATCACCGAGGGCCAGTCTTCCAGAGCATTTAATACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGTGTCCTGGAGTCACCAGAATCATaGGGTCCAGCAATATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPVTRLCVAQVPSFCVLESPES*GPAIFS Trigger: AGAGAATATTGCTGGACCCAATGATTCTGGTGACTC...CAGGACACAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | TTGTCTCCAGTCACACGGCTGTGTGTGGCCCAGGTTCCATCCTTCTGTGTCCTGTCAAATGTAAATTGTTaGCCTGGGCCTTTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPVTRLCVAQVPSFCVLSNVNC*PGPFGG Trigger: ACCTCCAAAAGGCCCAGGCAAACAATTTACATTTGA...CAGGACACAGAAGGATGGAACCTGGGCCACACACAGCCGTGTGACTGGAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | TTCACAACAGTTAGTGAGGCGGACCCCTTTTGGTCATCTGTGGTCTaGGCTTTGGAATTGGGAGGTGAAAGACATGGATCACTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTTVSEADPFWSSVV*ALELGGERHGSLPV Trigger: CACAGGAAGTGATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAACTGTTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 90 bp | TCTGAGTTTGGGATCCGGCCAATGGAGAGTTTCACTTTCTCCTTCTaGATACATCGGGTAAGAAACAAGGACACCTCCTCCAGGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SEFGIRPMESFTFSF*IHRVRNKDTSSRLW Trigger: CCAAAGCCTGGAGGAGGTGTCCTTGTTTCTTACCCGATGTATCCAGAAGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAAACTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CTCCTGCTCTGCTCTCTGATGGGTTGCTTTAACACCCTGGCAGTATaGTGTCATGAAGGAGACCCAGTCTTTAATCTTCTCCCTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLCSLMGCFNTLAV*CHEGDPVFNLLPVM Trigger: CATGACAGGGAGAAGATTAAAGACTGGGTCTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | CACATCTTGGCTGGATACAGCTCCAAACTTCCTCAGCTTCCCACTCCTGGGTTGGAGTCACCAGAATCATaGGGTCCAGCAATATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HILAGYSSKLPQLPTPGLESPES*GPAIFS Trigger: AGAGAATATTGCTGGACCCAATGATTCTGGTGACTC...CAACCCAGGAGTGGGAAGCTGAGGAAGTTTGGAGCTGTATCCAGCCAAGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGGCCAGGGAAATGTTCTTTCTAAAGCTGATACCAGATTTGTGGTTCTGTGGCAGGGCTCCTCTTaGGTGTCCTCTCCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKGQGNVLSKADTRFVVLWQGSS*VSSPVL Trigger: CAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCCA...CAGAACCACAAATCTGGTATCAGCTTTAGAAAGAACATTTCCCTGGCCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | CTTCTCCTCTGCTCTCTGATGGGTTGCTTTAACACCCTGGCAGTATaGTGTCATGAAGGAGACCCAGTCTTTAATCTTCTCCCTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLCSLMGCFNTLAV*CHEGDPVFNLLPVM Trigger: CATGACAGGGAGAAGATTAAAGACTGGGTCTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
||
| CDS GCA 90 bp | GACATCACCTCATCTGGGTGGCACTTGAACATCTTCTGCACAGATTaGATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DITSSGWHLNIFCTD*IFSWQFIPTSTVEP Trigger: CGGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178590.9 ENSMUST00000225909.2 |
||
| CDS CCA 90 bp | ACAATTTCACAACAGTTAGTGAGGCGGACCCCTTTTGGTCATCTGTaGTCTGGGCTTTGGAATTGGGAGGTGAAAGACATGGATCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TISQQLVRRTPFGHL*SGLWNWEVKDMDHF Trigger: GAAGTGATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAACTGTTGTGAAATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 90 bp | TCGATGGCATCCCGAGGAGAGAGGAACACGTTCAGAGTCTCCACTTaGCTCTCATCGGGGATGTTGTTGAGTAATATAGACAATTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SMASRGERNTFRVST*LSSGMLLSNIDNFT Trigger: TGTGAAATTGTCTATATTACTCAACAACATCCCCGATGAGAGCCAAGTGGAGACTCTGAACGTGTTCCTCTCTCCTCGGGATGCCATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGTGGGGCCAGTGGCCCCTGATGAAGATGAGCTaGCCTGAATCTTTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSVLTLLLSHYFMWGQWPLMKMS*PESLEA Trigger: AGCCTCCAAAGATTCAGGCAAGCTCATCTTCATCAG...GGGCCACTGGCCCCACATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 90 bp | GACATCACCTCATCTGGGTGGCACTTGAACATCTTCTGCACAGATTaGATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DITSSGWHLNIFCTD*IFSWQFIPTSTVEL Trigger: CAGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
||
| CDS CCA 90 bp | GCACAGATTGCATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTaGAGCTGCCGTCAATTTCGATGGAACCTCTGTGCTGATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQIASFPGSLYQLLQ*SCRQFRWNLCADGL Trigger: AAGACCATCAGCACAGAGGTTCCATCGAAATTGACGGCAGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
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| CDS CCA 90 bp | TCTGGGTGGCACTTGAACATCTTCTGCACAGATTGCATCTTTTCCTaGCAGTTTATACCAACTTCTACAGTGGAGCTGCCGTCAATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGWHLNIFCTDCIFS*QFIPTSTVELPSIS Trigger: CGAAATTGACGGCAGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
||
| CDS-3UTR CAA 90 bp | CACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTGCGAGTCTGTGGTCTGGGCTTaGGAATTGGGAGGTGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HTGNNLDNRTRTECLLCESVVWA*ELGGER Trigger: TCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGA...CTCGCAGAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 90 bp | TCTGGGTGGCACTTGAACATCTTCTGCACAGATTGCATCTTTTCCTaGCAGTTTATACCAACTTCTACAGTGGAGCCGTCAATTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SGWHLNIFCTDCIFS*QFIPTSTVEPSISM Trigger: CATCGAAATTGACGGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS GCA 90 bp | GTTCTGATGGACATCACCTCATCTGGGTGGCACTTGAACATCTTCTaGACAGATTGCATCTTTTCCTGGCAGTTTATACCAACTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VLMDITSSGWHLNIF*TDCIFSWQFIPTST Trigger: TGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTCCATCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CCA 90 bp | AGTAATATAGACAATTTCACAACAGTTAGTGAGGCGGACCCCTTTTaGTCATCTGTGGTCTGGGCTTTGGAATTGGGAGGTGAAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SNIDNFTTVSEADPF*SSVVWALELGGERH Trigger: ATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAACTGTTGTGAAATTGTCTATATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGCACCTCCTCCAGGCTTaGGGGTTTCAGGTCATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQIISPSVLTLLLSHYFMHLLQA*GFQVIH Trigger: GTGAATGACCTGAAACCCCAAAGCCTGGAGGAGGTG...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 90 bp | TTTAATCTTCTCCCTGTCATGGCCAATAAGGAAATAGTCTCTGTTTaGAGTTCTGATGGACATCACCTCATCTGGGTGGCACTTGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: FNLLPVMANKEIVSV*SSDGHHLIWVALEH Trigger: ATGTTCAAGTGCCACCCAGATGAGGTGATGTCCATCAGAACTGCAAACAGAGACTATTTCCTTATTGGCCATGACAGGGAGAAGATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCATTCCTGATTACTGAAAGGCCTTTGATTCTTTTGGCTTTGCAGAATGTCTGGGCTTTGGAATaGGGAGGTGAAAGACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSFLITERPLILLALQNVWALE*GGERHG Trigger: TCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGAC...ATTCTGCAAAGCCAAAAGAATCAAAGGCCTTTCAGTAATCAGGAATGAGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CAA 90 bp | GAGTGTCCAAACATAGTTTCCTATTTATTTTTAGAGCAAGCACATCTTGGCTGGTCATCTGGGTGGCACTaGAACATCTTCTGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ECPNIVSYLFLEQAHLGWSSGWH*NIFCTD Trigger: ATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGA...CCAGCCAAGATGTGCTTGCTCTAAAAATAAATAGGAAACTATGTTTGGACACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CAA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTCAAATGTAAATTGTTaGCCTGGGCCTTTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TFHTGNNLDNRTRTECLLSNVNC*PGPFGG Trigger: ACCTCCAAAAGGCCCAGGCAAACAATTTACATTTGA...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CAA 90 bp | ACATTTCACACTGGCAATAATCTAGATAACAGAACACGTACTGAATGTCTCCTCTCATCGGGGATGTTGTaGAGTAATATAGACAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFHTGNNLDNRTRTECLLSSGML*SNIDNF Trigger: GAAATTGTCTATATTACTCAACAACATCCCCGATGA...GAGGAGACATTCAGTACGTGTTCTGTTATCTAGATTATTGCCAGTGTGAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGATAATCAGCCCTTCCGTTTTAACTCTACTCCTTAGTCATTATTTCATGTCATCGGGGATGTTGTaGAGTAATATAGACAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQIISPSVLTLLLSHYFMSSGML*SNIDNF Trigger: GAAATTGTCTATATTACTCAACAACATCCCCGATGA...CATGAAATAATGACTAAGGAGTAGAGTTAAAACGGAAGGGCTGATTATCTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS TCA 72 bp | TCCTGTGCCGCTGTCCTGGTGGGGAGGCCCCAGCTCTaGCTCTGTCTGGAATTCCGCTTGGCCATCGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCAAVLVGRPQL*LCLEFRLAIVV Trigger: GACAACGATGGCCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | CTGTCCTGGTGGGGAGGCCCCAGCTCTGACTCTGTCTaGAATTCCGCTTGGCCATCGTTGTCGTCGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSWWGGPSSDSV*NSAWPSLSSAD Trigger: ATCAGCCGACGACAACGATGGCCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 72 bp | AGGACCTTCCCAGCGAGCCACACAGATCTGTCCTGCTaGTTCTACCAGAGCGAGGTAGTCGATGGCATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTFPASHTDLSC*FYQSEVVDGIP Trigger: CGGGATGCCATCGACTACCTCGCTCTGGTAGAAGCAGCAGGACAGATCTGTGTGGCTCGCTGGGAAGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 72 bp | GGGAGGACCTTCCCAGCGAGCCACACAGATCTGTCCTaGTGCTTCTACCAGAGCGAGGTAGTCGATGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GRTFPASHTDLS*CFYQSEVVDGI Trigger: GATGCCATCGACTACCTCGCTCTGGTAGAAGCAGCAGGACAGATCTGTGTGGCTCGCTGGGAAGGTCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS GCA 72 bp | TGGAATTGGGAGGTGAAAGACATGGATCACTTCCTGTaGCGCTGTCCTGGTGGGGAGGCCCCAGCTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: WNWEVKDMDHFL*RCPGGEAPALT Trigger: AGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGAAGTGATCCATGTCTTTCACCTCCCAATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | TACCCTCGGGTATGCTGCAGAGGCCCAAGAAAGGACTaGGGTCGGAAACTGGCCTTCTGTCACCCAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: YPRVCCRGPRKD*GRKLAFCHPGK Trigger: TTTCCCTGGGTGACAGAAGGCCAGTTTCCGACCCCAGTCCTTTCTTGGGCCTCTGCAGCATACCCGAGGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CCA 72 bp | GGAGGCCCCAGCTCTGACTCTGTCTGGAATTCCGCTTaGCCATCGTTGTCGTCGGCTGATGCAGAGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGPSSDSVWNSA*PSLSSADAEVD Trigger: ATCAACCTCTGCATCAGCCGACGACAACGATGGCCAAGCGGAATTCCAGACAGAGTCAGAGCTGGGGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 72 bp | GAAAGACATGGATCACTTCCTGTGCCGCTGTCCTGGTaGGGAGGCCCCAGCTCTGACTCTGTCTGGAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERHGSLPVPLSW*GGPSSDSVWNS Trigger: GGAATTCCAGACAGAGTCAGAGCTGGGGCCTCCCCACCAGGACAGCGGCACAGGAAGTGATCCATGTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS CCA 72 bp | GATGGCAGGGCTCCTCTTTGGTGTCCTCTCCAGTTCTaGCAAATCCCGCTGGACAGACTCAGCCAACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DGRAPLWCPLQF*QIPLDRLSQLV Trigger: CACCAGTTGGCTGAGTCTGTCCAGCGGGATTTGCCAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS TCA 72 bp | AATGCTCTGGAAGACTGGCCCTCGGTGATGCAAGTCTaGTACCCTCGGGTATGCTGCAGAGGCCCAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NALEDWPSVMQV*YPRVCCRGPRK Trigger: CTTTCTTGGGCCTCTGCAGCATACCCGAGGGTATCAGACTTGCATCACCGAGGGCCAGTCTTCCAGAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
||
| CDS CCA 72 bp | AACTGGTGTCTTAAGGAGCATGCACAGGGGGAAGCGTaGAGCTTCTCTGAGTTTGGGATCCGGCCAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NWCLKEHAQGEA*SFSEFGIRPME Trigger: CTCCATTGGCCGGATCCCAAACTCAGAGAAGCTCCACGCTTCCCCCTGTGCATGCTCCTTAAGACACCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS TCA 72 bp | CTGTCACCCAGGGAAAGCTTCTCCTGCTCTGCTCTCTaGTGGGTTGCTTTAACACCCTGGCAGTATGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSPRESFSCSAL*WVALTPWQYGV Trigger: GACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGCAGGAGAAGCTTTCCCTGGGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178590.9 |
||
| CDS CAA 72 bp | AGCATGCACAGGGGGAAGCGTGGAGCTTCTCTGAGTTaGGGATCCGGCCAATGGAGAGTTTCACTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SMHRGKRGASLS*GSGQWRVSLSP Trigger: AGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAAACTCAGAGAAGCTCCACGCTTCCCCCTGTGCATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
||
| CDS TCA 72 bp | CTTCTGTCACCCAGGGAAAGCTTCTCCTCTGCTCTCTaGTGGGTTGCTTTAACACCCTGGCAGTATGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPRESFSSAL*WVALTPWQYGV Trigger: GACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAAGCTTTCCCTGGGTGACAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
||
| CDS CCA 72 bp | CTCTTTGGTGTCCTCTCCAGTTCTGGCAAATCCCGCTaGACAGACTCAGCCAACTGGTGTCTTAAGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LFGVLSSSGKSR*TDSANWCLKEH Trigger: ATGCTCCTTAAGACACCAGTTGGCTGAGTCTGTCCAGCGGGATTTGCCAGAACTGGAGAGGACACCAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | TTCCTTCTGACTCTTTTTGATGGCAGGGCTCCTCTTTaGTGTCCTCTCCAGTTCTGGCAAATCCCGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: FLLTLFDGRAPL*CPLQFWQIPLD Trigger: GTCCAGCGGGATTTGCCAGAACTGGAGAGGACACCAAAGAGGAGCCCTGCCATCAAAAAGAGTCAGAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CAA 90 bp | GTCTTAAGGAGCATGCACAGGGGGAAGCGTGGAGCTTCTCTGAGTTaGGGATCCGGCCAATGGAGAGTTTCACTTTCTCCTTCTGGATAC | + |
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Preference number: 6 (lower is better) Translates to: VLRSMHRGKRGASLS*GSGQWRVSLSPSGY Trigger: GTATCCAGAAGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAAACTCAGAGAAGCTCCACGCTTCCCCCTGTGCATGCTCCTTAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 72 bp | ACCCAGGGAAAGCTTCTCCTCTGCTCTCTGATGGGTTaGTTTAACACCCTGGCAGTATGGTGTCATGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: TQGKLLLCSLMG*FNTLAVWCHEG Trigger: TCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCAGAGGAGAAGCTTTCCCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000225909.2 |
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| CDS CCA 72 bp | GTTAGTGAGGCGGACCCCTTTTGGTCATCTGTGGTCTaGGCTTTGGAATTGGGAGGTGAAAGACATGGATCA | + |
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Preference number: 6 (lower is better) Translates to: VSEADPFWSSVV*ALELGGERHGS Trigger: TGATCCATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | CAACAGTTAGTGAGGCGGACCCCTTTTGGTCATCTGTaGTCTGGGCTTTGGAATTGGGAGGTGAAAGACATG | + |
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Preference number: 6 (lower is better) Translates to: QQLVRRTPFGHL*SGLWNWEVKDM Trigger: CATGTCTTTCACCTCCCAATTCCAAAGCCCAGACCACAGATGACCAAAAGGGGTCCGCCTCACTAACTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | AAGCGTGGAGCTTCTCTGAGTTTGGGATCCGGCCAATaGAGAGTTTCACTTTCTCCTTCTGGATACATCGGG | + |
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Preference number: 6 (lower is better) Translates to: KRGASLSLGSGQ*RVSLSPSGYIG Trigger: CCCGATGTATCCAGAAGGAGAAAGTGAAACTCTCCATTGGCCGGATCCCAAACTCAGAGAAGCTCCACGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CAA 90 bp | CTTCTGGATACATCGGGTAAGAAACAAGGACACCTCCTCCAGGCTTaGGGGTTTCAGGTCATTCACGGCCAAGATATGATCTCCGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLDTSGKKQGHLLQA*GFQVIHGQDMISVV Trigger: TACCACGGAGATCATATCTTGGCCGTGAATGACCTGAAACCCCAAAGCCTGGAGGAGGTGTCCTTGTTTCTTACCCGATGTATCCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CCA 72 bp | TCCCGAGGAGAGAGGAACACGTTCAGAGTCTCCACTTaGCTCTCATCGGGGATGTTGTTGAGTAATATAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRGERNTFRVST*LSSGMLLSNID Trigger: GTCTATATTACTCAACAACATCCCCGATGAGAGCCAAGTGGAGACTCTGAACGTGTTCCTCTCTCCTCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CAA 72 bp | TTGCTCTCCGCTCTCTTGAAACCTTGGTCCGGACTATaGGATTCGATGGAGTCACCAGAATCATTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLSALLKPWSGL*DSMESPESLGP Trigger: TGGACCCAATGATTCTGGTGACTCCATCGAATCCAATAGTCCGGACCAAGGTTTCAAGAGAGCGGAGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 72 bp | CTCCCTGTCATGGCCAATAAGGAAATAGTCTCTGTTTaGAGTTCTGATGGACATCACCTCATCTGGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPVMANKEIVSV*SSDGHHLIWVA Trigger: TGCCACCCAGATGAGGTGATGTCCATCAGAACTGCAAACAGAGACTATTTCCTTATTGGCCATGACAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CAA 90 bp | AGGAACACGTTCAGAGTCTCCACTTGGCTCTCATCGGGGATGTTGTaGAGTAATATAGACAATTTCACAACAGTTAGTGAGGCGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: RNTFRVSTWLSSGML*SNIDNFTTVSEADP Trigger: GGGGTCCGCCTCACTAACTGTTGTGAAATTGTCTATATTACTCAACAACATCCCCGATGAGAGCCAAGTGGAGACTCTGAACGTGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CAA 90 bp | GGACATCACCTCATCTGGGTGGCACTTGAACATCTTCTGCACAGATaGCATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GHHLIWVALEHLLHR*HLFLAVYTNFYSGA Trigger: GGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CAA 90 bp | GGACATCACCTCATCTGGGTGGCACTTGAACATCTTCTGCACAGATaGCATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GHHLIWVALEHLLHR*HLFLAVYTNFYSGA Trigger: AGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
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| CDS CAA 90 bp | GAGAGGAACACGTTCAGAGTCTCCACTTGGCTCTCATCGGGGATGTaGTTGAGTAATATAGACAATTTCACAACAGTTAGTGAGGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: ERNTFRVSTWLSSGM*LSNIDNFTTVSEAD Trigger: GTCCGCCTCACTAACTGTTGTGAAATTGTCTATATTACTCAACAACATCCCCGATGAGAGCCAAGTGGAGACTCTGAACGTGTTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS GCA 72 bp | TTTCCTGGCAGTTTATACCAACTTCTACAGTGGAGCTaGCGTCAATTTCGATGGAACCTCTGTGCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: FPGSLYQLLQWS*RQFRWNLCADG Trigger: ACCATCAGCACAGAGGTTCCATCGAAATTGACGGCAGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
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| CDS CCA 72 bp | GCATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTaGAGCTGCCGTCAATTTCGATGGAACCTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ASFPGSLYQLLQ*SCRQFRWNLCA Trigger: AGCACAGAGGTTCCATCGAAATTGACGGCAGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039666.8 |
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| CDS CCA 72 bp | TGCTCTCTGATGGGTTGCTTTAACACCCTGGCAGTATaGTGTCATGAAGGAGACCCAGTCTTTAATCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSLMGCFNTLAV*CHEGDPVFNLL Trigger: GAGAAGATTAAAGACTGGGTCTCCTTCATGACACCATACTGCCAGGGTGTTAAAGCAACCCATCAGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS GCA 72 bp | GACATCACCTCATCTGGGTGGCACTTGAACATCTTCTaGACAGATTGCATCTTTTCCTGGCAGTTTATACCA | + |
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Preference number: 6 (lower is better) Translates to: DITSSGWHLNIF*TDCIFSWQFIP Trigger: TGGTATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CCA 72 bp | GCATCTTTTCCTGGCAGTTTATACCAACTTCTACAGTaGAGCCGTCAATTTCGATGGAACCTCTGTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ASFPGSLYQLLQ*SRQFRWNLCAD Trigger: ATCAGCACAGAGGTTCCATCGAAATTGACGGCTCCACTGTAGAAGTTGGTATAAACTGCCAGGAAAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CAA 90 bp | TCTCTGTTTGCAGTTCTGATGGACATCACCTCATCTGGGTGGCACTaGAACATCTTCTGCACAGATTGCATCTTTTCCTGGCAGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: SLFAVLMDITSSGWH*NIFCTDCIFSWQFI Trigger: TATAAACTGCCAGGAAAAGATGCAATCTGTGCAGAAGATGTTCAAGTGCCACCCAGATGAGGTGATGTCCATCAGAACTGCAAACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CCA 72 bp | CCGGACTATTGGATTCGATGGAGTCACCAGAATCATTaGGTCCAGCAATATTCTCTAATTCTAAACAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PDYWIRWSHQNH*VQQYSLILNRL Trigger: AAGCCTGTTTAGAATTAGAGAATATTGCTGGACCCAATGATTCTGGTGACTCCATCGAATCCAATAGTCCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 ENSMUST00000225909.2 |
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| CDS CAA 72 bp | TTCAGAGTCTCCACTTGGCTCTCATCGGGGATGTTGTaGAGTAATATAGACAATTTCACAACAGTTAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FRVSTWLSSGML*SNIDNFTTVSE Trigger: CTCACTAACTGTTGTGAAATTGTCTATATTACTCAACAACATCCCCGATGAGAGCCAAGTGGAGACTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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| CDS CAA 90 bp | AAACCTTGGTCCGGACTATTGGATTCGATGGAGTCACCAGAATCATaGGGTCCAGCAATATTCTCTAATTCTAAACAGGCTTCTAAACTT | + |
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Preference number: 6 (lower is better) Translates to: KPWSGLLDSMESPES*GPAIFSNSKQASKL Trigger: AAGTTTAGAAGCCTGTTTAGAATTAGAGAATATTGCTGGACCCAATGATTCTGGTGACTCCATCGAATCCAATAGTCCGGACCAAGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039666.8 ENSMUST00000178590.9 |
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