Pregenerated sensors for PLEKHO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050721Ensembl transcript IDs: ENSMUST00000068944.9
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCGAGGTCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTaGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PARSCPVLLAATAVC*RLKGRSESQRQRGR Trigger: CCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 90 bp | AGATTCTGTGACCGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTaGTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGGTCGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RFCDRSFLQRGPAQS*WLPQQCAGDSRVAQ Trigger: CTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 90 bp | TTCTGTGACCGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTaGCTGCCACAGCAGTGTGCTGGAGACTCAAGGGTCGCTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: FCDRSFLQRGPAQSC*LPQQCAGDSRVAQR Trigger: TCTCTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 90 bp | AAGCCCTGGGGGCAGTCTGCATCAACCACACAGACCACAGGACTATaGTCCATCCCAAGCCCAGAGCCTAGAGAAGAGGCCAGACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: KPWGQSASTTQTTGL*SIPSPEPREEARQV Trigger: TACCTGTCTGGCCTCTTCTCTAGGCTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 90 bp | CATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTCTaGATCAACCACACAGACCACAGGACTATGCTCCATCCCAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: HPGNSNHGAKALGAV*INHTDHRTMLHPKP Trigger: GGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 90 bp | TCCCCACAGCTAGAAAGGGCCAGTACAATAATGAAGGCATCAACCTaGACTGGTTGGCAGGCCTTGGTGGGCACAACTGGCGACTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPQLERASTIMKAST*TGWQALVGTTGDWE Trigger: CTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGATGCCTTCATTATTGTACTGGCCCTTTCTAGCTGTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 90 bp | CTAGAAAGGGCCAGTACAATAATGAAGGCATCAACCTGCACTGGTTaGCAGGCCTTGGTGGGCACAACTGGCGACTGGGAGCAGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LERASTIMKASTCTG*QALVGTTGDWEQGE Trigger: CTCACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGATGCCTTCATTATTGTACTGGCCCTTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR TCA 90 bp | TCAGCTGGGCTCTACCCGGAAGTCAGGAATGTAAACCGTTGGCAGTaGGAACAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SAGLYPEVRNVNRWQ*EQTVPSWKLQPWCQ Trigger: TTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTGTTCTCACTGCCAACGGTTTACATTCCTGACTTCCGGGTAGAGCCCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR TCA 90 bp | GCAGGTGACTTGGAAGAAGTACAGCACCCTTGTTGCTGTAGGGGATaGTTGTTCCCAAGGGAAGATGGCAGGGGATCAAGACTGGACACC | + |
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Preference number: 1 (lower is better) Translates to: AGDLEEVQHPCCCRG*LFPREDGRGSRLDT Trigger: GGTGTCCAGTCTTGATCCCCTGCCATCTTCCCTTGGGAACAATCATCCCCTACAGCAACAAGGGTGCTGTACTTCTTCCAAGTCACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 90 bp | GTAGGGGATGATTGTTCCCAAGGGAAGATGGCAGGGGATCAAGACTaGACACCTGAGGACATTCTTGCTCTTGTACAGGAGATGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: VGDDCSQGKMAGDQD*TPEDILALVQEMEG Trigger: TCCCTCCATCTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCCTTGGGAACAATCATCCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGTGGAAACTCCAACCATaGTGCCAAAGCCCTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LETQGSLREPEATGKGGGWKLQP*CQSPGG Trigger: GCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCA...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR GCA 90 bp | GATTCTGTGACCGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTGGCTGCCAGACCACAGGACTATaGTCCATCCCAAGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: DSVTAPSSSEVLPSPAGCQTTGL*SIPSPE Trigger: CTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTG...GCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCACTGGTTGGCAGGCCTTGGTGGGCACAACTGGCGACTGGGAGCAGGGTAAACTCCAACCATGGTaGCAAAGCCCTGGGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TCTGWQALVGTTGDWEQGKLQPW*QSPGGS Trigger: ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTT...ACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCACTGGTTGGCAGGCCTTGGTGGGCACAACTGGCGACTGGGAGCAGGGTCAGAACGGTTCCAGCTaGGGAAGAACCACAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: TCTGWQALVGTTGDWEQGQNGSS*GRTTET Trigger: AGTCTCTGTGGTTCTTCCTCAGCTGGAACCGTTCTG...ACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR CCA 90 bp | CGAGGTCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGAGGAATGTGCAAGGCTaGACAGAAGCTGGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RGPAQSCWLPQQCAGDSRRNVQG*TEAGPE Trigger: TTCTGGGCCAGCTTCTGTCCAGCCTTGCACATTCCT...CCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTACAGGAGCCTGCCCAGTCCTGCTaGCTGCCACAGCAGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: MAGDQDWTPEDILALVQEPAQSC*LPQQCA Trigger: AGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGG...CTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CAA 90 bp | AGGCAGGTCAGCTGGGCTCTACCCGGAAGTCAGGAATGTAAACCGTaGGCAGTGAGAACAGACGGTGCCATCCTGGAAACTCCAACCATG | + |
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Preference number: 2 (lower is better) Translates to: RQVSWALPGSQECKP*AVRTDGAILETPTM Trigger: CATGGTTGGAGTTTCCAGGATGGCACCGTCTGTTCTCACTGCCAACGGTTTACATTCCTGACTTCCGGGTAGAGCCCAGCTGACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCCTGAAGACCAGAAGATGGGAGCCTCAGGCAGGTCAGCTGGGCTCTACCAGTGAGAACAGACGGTaGCATCCTGGAAACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: ICLKTRRWEPQAGQLGSTSENRR*HPGNSN Trigger: GTTGGAGTTTCCAGGATGGCACCGTCTGTTCTCACT...GGTAGAGCCCAGCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGGGGGCCTCTAAAGGTTaGTTAATGATAATTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: LETQGSLREPEATGKGGGGASKG*LMIISY Trigger: GTATGAAATTATCATTAATCAACCTTTAGAGGCCCC...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 72 bp | CCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTGGCTaGCACAGCAGTGTGCTGGAGACTCAAGGGTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: PSSSEVLPSPAG*HSSVLETQGSL Trigger: GAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | CGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTaGCTGCCACAGCAGTGTGCTGGAGACTCAAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: RSFLQRGPAQSC*LPQQCAGDSRV Trigger: GACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | GTGTGGCTGGTGGGAATCTGCCTGAAGACCAGAAGATaGGAGCCTCAGGCAGGTCAGCTGGGCTCTACCCGG | + |
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Preference number: 3 (lower is better) Translates to: VWLVGICLKTRR*EPQAGQLGSTR Trigger: CCGGGTAGAGCCCAGCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGATTCCCACCAGCCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | TCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTaGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SCPVLLAATAVC*RLKGRSESQRQ Trigger: TTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | ACTGGTTGGCAGGCCTTGGTGGGCACAACTGGCGACTaGGAGCAGGGTGAGAGGAAAGGCCATCATGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TGWQALVGTTGD*EQGERKGHHVA Trigger: AGCCACATGATGGCCTTTCCTCTCACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 72 bp | GAACAGACGGTGCCATCCTGGAAACTCCAACCATGGTaGCAAAGCCCTGGGGGCAGTCTGCATCAACCACAC | + |
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Preference number: 3 (lower is better) Translates to: EQTVPSWKLQPW*QSPGGSLHQPH Trigger: GTGTGGTTGATGCAGACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | GCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTaGGGGCAGTCTGCATCAACCACACAGACCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: AILETPTMVPKP*GQSASTTQTTG Trigger: TCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTAATCAACCTGCACTGGTaGGCAGGCCTTGGTGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GKMAGDQDWTPEDILALVINLHW*AGLGGH Trigger: GTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGAT...TACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR TCA 72 bp | ATACTCTTAAGTGGGTGTGGCTGGTGGGAATCTGCCTaGAGACCAGAAGATGGGAGCCTCAGGCAGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: ILLSGCGWWESA*RPEDGSLRQVS Trigger: GCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGATTCCCACCAGCCACACCCACTTAAGAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 72 bp | AACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTCTaGATCAACCACACAGACCACAGGACTATGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: NSNHGAKALGAV*INHTDHRTMLH Trigger: ATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | ACAGCCAGACCCAAGGCCCCTCTAGATACTCTTAAGTaGGTGTGGCTGGTGGGAATCTGCCTGAAGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: TARPKAPLDTLK*VWLVGICLKTR Trigger: TCTGGTCTTCAGGCAGATTCCCACCAGCCACACCCACTTAAGAGTATCTAGAGGGGCCTTGGGTCTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | GCACGGCCGGGCTCTAATTCCTGGAAGCAGGTGACTTaGAAGAAGTACAGCACCCTTGTTGCTGTAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: ARPGSNSWKQVT*KKYSTLVAVGD Trigger: ATCCCCTACAGCAACAAGGGTGCTGTACTTCTTCCAAGTCACCTGCTTCCAGGAATTAGAGCCCGGCCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR TCA 72 bp | CCAAGGGAAGATGGCAGGGGATCAAGACTGGACACCTaGGGACATTCTTGCTCTTGTACAGGAGATGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: PREDGRGSRLDT*GHSCSCTGDGG Trigger: CCCTCCATCTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 72 bp | CTAGATACTCTTAAGTGGGTGTGGCTGGTGGGAATCTaGCTGAAGACCAGAAGATGGGAGCCTCAGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LDTLKWVWLVGI*LKTRRWEPQAG Trigger: ACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGATTCCCACCAGCCACACCCACTTAAGAGTATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR GCA 72 bp | CTAGAAAGGGCCAGTACAATAATGAAGGCATCAACCTaGACTGGTTGGCAGGCCTTGGTGGGCACAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: LERASTIMKAST*TGWQALVGTTG Trigger: GCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGATGCCTTCATTATTGTACTGGCCCTTTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | AGACCCAAGGCCCCTCTAGATACTCTTAAGTGGGTGTaGCTGGTGGGAATCTGCCTGAAGACCAGAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: RPKAPLDTLKWV*LVGICLKTRRW Trigger: CCATCTTCTGGTCTTCAGGCAGATTCCCACCAGCCACACCCACTTAAGAGTATCTAGAGGGGCCTTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | TTTCATCTTCAGGAATGTGCAAGGCTGGACAGAAGCTaGCCCAGAAGCAGAGACTGTACCAGGAAGCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FHLQECARLDRS*PRSRDCTRKPE Trigger: CTCAGGCTTCCTGGTACAGTCTCTGCTTCTGGGCCAGCTTCTGTCCAGCCTTGCACATTCCTGAAGATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| 3UTR CCA 72 bp | GATTGTTCCCAAGGGAAGATGGCAGGGGATCAAGACTaGACACCTGAGGACATTCTTGCTCTTGTACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DCSQGKMAGDQD*TPEDILALVQE Trigger: CTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCCTTGGGAACAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR TCA 90 bp | CGAGGTCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGAGCCTGGCTGAGCAATaGCTCGGCACACACAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RGPAQSCWLPQQCAGDSRSLAEQ*LGTHRR Trigger: CCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCT...CCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR CCA 90 bp | ACCTGCACTGGTTGGCAGGCCTTGGTGGGCACAACTGGCGACTGGGAGCAGGGTTCTCCGACAGGATCTTaGGAGGGGGTGCAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TCTGWQALVGTTGDWEQGSPTGS*EGVQGA Trigger: AGCCCCCTGCACCCCCTCCCAAGATCCTGTCGGAGA...ACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR CCA 90 bp | CTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGTGCTGCCGCATCCTCTaGGGCAGGTCCAGGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: LAATAVCWRLKGRSESQRCCRIL*GRSRDA Trigger: GGCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCA...CCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR GCA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTGGGCAGGTCCAGGGATaGCCATGGCCTGTAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSGQVQG*PWPVRP Trigger: CGGCCTTACAGGCCATGGGCATCCCTGGACCTGCCC...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR TCA 90 bp | GATTCTGTGACCGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTGGCTGCGCTCTACAGCCTGGCTaGGCAATGACTCGGCACACA | + |
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Preference number: 4 (lower is better) Translates to: DSVTAPSSSEVLPSPAGCALQPG*AMTRHT Trigger: TGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGC...GCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR CCA 90 bp | GTCTGCATCAACCACACAGACCACAGGACTATGCTCCATCCCAAGCCCAGAGCCGTGGATTCTTGTTGGTaGCCGCCGCCGCTGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VCINHTDHRTMLHPKPRAVDSCW*PPPLAP Trigger: GGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCAC...GGCTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR CCA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTCATGAGAGCCCGAGGTaGCTCCTGGGGCTGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSHESPR*LLGLVF Trigger: GAAGACCAGCCCCAGGAGCCACCTCGGGCTCTCATG...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR TCA 90 bp | CTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGGTTTCGAAGCCACCTTaGCTTCCAGCTGGGCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LAATAVCWRLKGRSESQRVSKPP*LPAGPD Trigger: ATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAAC...CCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR GCA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTGTGGCCTGCCTCAGTTaGTCTACAGCCTGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSVACLS*STAWLS Trigger: GCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCAC...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR CCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGCTTGGCTCTCAGGATTaGCCCCAGAGCTTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LETQGSLREPEATGKGGGLGSQD*PQSLQS Trigger: ACTCTGCAAGCTCTGGGGCCAATCCTGAGAGCCAAG...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGCTTTGCTGGGGTCTCTaGATCCTCTTGGCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: CWRLKGRSESQRQRGREELCWGL*ILLALR Trigger: CCTGAGAGCCAAGAGGATGCAGAGACCCCAGCAAAG...CTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS-3UTR GCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGCGAAGAGGACAACTGTaGACTCTCAGGAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LETQGSLREPEATGKGGGRRGQL*TLRSRR Trigger: CCTTCTGCTCCTGAGAGTGCACAGTTGTCCTCTTCG...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGACTGTCCTCCTTTGCTaGGGTCTCTGCATCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LETQGSLREPEATGKGGGTVLLC*GLCILL Trigger: CAAGAGGATGCAGAGACCCCAGCAAAGGAGGACAGT...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | GCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGTCTACCAGCCAGCCTTGTCTaGAGTCCGTGCTCCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIRSLKSWPNLMYPVVRLPASLV*SPCSTR Trigger: CCTCGTGGAGCACGGACTGCAGACAAGGCTGGCTGG...TAGACGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCACAACTGGCGACTGGGAGCAGGGTGAGAGGAAAGGCCATCATGTGGCTCGGTTCCGTGTCACATaGTCTAGGGCACAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTTGDWEQGERKGHHVARFRVT*SRAQVL Trigger: CAAGACCTGTGCCCTAGAGCATGTGACACGGAACCG...AGCCACATGATGGCCTTTCCTCTCACCCTGCTCCCAGTCGCCAGTTGTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGACTGACCTTGTTCCCTaGGGATCGCAGCAGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LETQGSLREPEATGKGGGTDLVP*GSQQDK Trigger: TTTATCCTGCTGCGATCCCCAGGGAACAAGGTCAGT...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | GATTCTGTGACCGCTCCTTCCTCCAGCGAGGTCCTGCCCAGTCCTGCTGGCTGCGCTACCTCCTTTAAGTaGATTCTTGTTGGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DSVTAPSSSEVLPSPAGCATSFK*ILVGGR Trigger: GCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGC...GCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCTGAAGACCAGAAGATGGGAGCCTCAGGCAGGTCAGCTGGGCTCTACCAGCAGAAGGCTTCTCTaGGCTGGGGTTCTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ICLKTRRWEPQAGQLGSTSRRLL*AGVLPA Trigger: AGCTGGGAGAACCCCAGCCCAGAGAAGCCTTCTGCT...GGTAGAGCCCAGCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | GCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGTCTACGAGAAGGGCAGTGCTaGGGATGCTGCCGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AIRSLKSWPNLMYPVVRLREGQC*GCCRIL Trigger: GAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCG...TAGACGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGAGGATGAAACTGGGATaGCAAGTCCGAGAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWRLKGRSESQRQRGREERMKLG*QVREGQ Trigger: CTGCCCTTCTCGGACTTGCCATCCCAGTTTCATCCT...CTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGAAATCCCTCATTTCCTaGAGGACTTGTGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWRLKGRSESQRQRGREEKSLIS*RTCVAC Trigger: GCAGGCCACACAAGTCCTGCAGGAAATGAGGGATTT...CTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTAGGAGCAAACACTGGTaGTCCACTGTCTGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSRSKHW*STVWDI Trigger: GATGTCCCAGACAGTGGACCACCAGTGTTTGCTCCT...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCCTGGGGGCAGTCTGCATCAACCACACAGACCACAGGACTATGCTCCACCTGGGGGTAGCCTCTaGAGTCTCCGAAGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPGGSLHQPHRPQDYAPPGGSL*SLRRGQ Trigger: TTGTCCTCTTCGGAGACTCCAGAGGCTACCCCCAGG...TGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGAGCCCAGGGGTTTCTTaGTTCAGTTCTCCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CWRLKGRSESQRQRGREESPGVS*FSSPKS Trigger: GGATTTGGGAGAACTGAACCAAGAAACCCCTGGGCT...CTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGCACAACTGGCGACTGGGAGCAGGGTGAGAGGAAAGGCCATCATGTGGCTAGCAGGATAAAGCGGTaGTGTTTCCGCTTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGTTGDWEQGERKGHHVASRIKR*CFRLRR Trigger: TCTCCTCAAGCGGAAACATCACCGCTTTATCCTGCT...AGCCACATGATGGCCTTTCCTCTCACCCTGCTCCCAGTCGCCAGTTGTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGGTTTCTCAGACAAGGTaGTGTTGGGGAGACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LETQGSLREPEATGKGGGVSQTR*CWGDFS Trigger: TGAAAAGTCTCCCCAACAGCACCTTGTCTGAGAAAC...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGGGTGGCTCCTGGGGCTaGTCTTCACTGATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHQEPQVLAKLDVPSGAGGSWG*SSLMSL Trigger: CAGTGACATCAGTGAAGACCAGCCCCAGGAGCCACC...CGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCCTGGGGGCAGTCTGCATCAACCACACAGACCACAGGACTATGCTCCAGGGGCCTCAGAACTCTaGGATGAACCAGAAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPGGSLHQPHRPQDYAPGASEL*DEPEAS Trigger: GGATGCTTCTGGTTCATCCCAGAGTTCTGAGGCCCC...TGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGACTGCCCCCAGGGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGCCATTCACAGACACCTaGGTCGGCTCTGGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHQEPQVLAKLDVPSGAPFTDT*VGSGEV Trigger: CACTTCCCCAGAGCCGACCCAGGTGTCTGTGAATGG...CGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| 3UTR CAA 72 bp | GGCCAGTACAATAATGAAGGCATCAACCTGCACTGGTaGGCAGGCCTTGGTGGGCACAACTGGCGACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQYNNEGINLHW*AGLGGHNWRLG Trigger: TCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGATGCCTTCATTATTGTACTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTACAGGAGCTTGTCTGCAGTCCGTaGTCCACGAGGCTTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAGDQDWTPEDILALVQELVCSP*STRLLA Trigger: AGCGAGAAGCCTCGTGGAGCACGGACTGCAGACAAG...CTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGAAAACACTCCTCTCACTAGGAAGTAAAGGAGGGGCAGCCCACCAGCAGGACCATCATCCATaGCATTCACAGACACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEKTLLSLGSKGGAAHQQDHHP*HSQTPG Trigger: CCCAGGTGTCTGTGAATGGCATGGATGATGGTCCTG...CTGGTGGGCTGCCCCTCCTTTACTTCCTAGTGAGAGGAGTGTTTTCTCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTACAGGAGAGAGGTCTCTGGTCCTaGGGAAGGCTTGACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGDQDWTPEDILALVQERGLWS*GRLDRR Trigger: CCTCCTGTCAAGCCTTCCCCAGGACCAGAGACCTCT...CTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGCATCAACCACACAGACCACAGGACTATGCTCCATCCCAAGCCCAGAGCCTCGCTGCCCAGCACCTaGTTCAACAATTTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCINHTDHRTMLHPKPRASLPST*FNNFSV Trigger: GACAGAGAAATTGTTGAACCAGGTGCTGGGCAGCGA...GGCTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| 3UTR CAA 72 bp | AGCTGGGCTCTACCCGGAAGTCAGGAATGTAAACCGTaGGCAGTGAGAACAGACGGTGCCATCCTGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SWALPGSQECKP*AVRTDGAILET Trigger: AGTTTCCAGGATGGCACCGTCTGTTCTCACTGCCAACGGTTTACATTCCTGACTTCCGGGTAGAGCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| 3UTR CAA 72 bp | AACAGGGGTAGGGATGCTGCAGAGAAGACCCTCGATTaGCAGAGAGGGCAACAAACCAGAGTAAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NRGRDAAEKTLD*QRGQQTRVKSP Trigger: GGGGCTCTTTACTCTGGTTTGTTGCCCTCTCTGCAAATCGAGGGTCTTCTCTGCAGCATCCCTACCCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTACAGGAGTCCCCACTGGGGGCCTaGAATTTGATGTCACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: MAGDQDWTPEDILALVQESPLGA*NLMSLT Trigger: GGTCAGTGACATCAAATTCCAGGCCCCCAGTGGGGA...CTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGAAAACACTCCTCTCACTAGGAAGTAAAGGAGGGGCAGCCCACCAGCAGACAAGGTGCTGTTaGGGAGACTTTTCACGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGEKTLLSLGSKGGAAHQQTRCC*GDFSRH Trigger: GTGACGTGAAAAGTCTCCCCAACAGCACCTTGTCTG...CTGGTGGGCTGCCCCTCCTTTACTTCCTAGTGAGAGGAGTGTTTTCTCTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTAAGTTGCTCTACAGCCTaGCTGAGCAATGACTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKMAGDQDWTPEDILALVSCSTA*LSNDSA Trigger: TGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACT...TACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CGAGGTCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGTTCTCCGACAGGATCTaGGGAGGGGGTGCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPAQSCWLPQQCAGDSRFSDRI*GGGAGG Trigger: GCCCCCTGCACCCCCTCCCAAGATCCTGTCGGAGAA...CCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 90 bp | AGGATGAAACTGGGATGGCAAGTCCGAGAAGGGCAGTGCTGGGGATaGTGCCGCATCCTCTGGGGCAGGTCCAGGGATGCCCATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RMKLGWQVREGQCWG*CRILWGRSRDAHGL Trigger: CAGGCCATGGGCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCGGACTTGCCATCCCAGTTTCATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 90 bp | AGAGGAGCGAGGATGAAACTGGGATGGCAAGTCCGAGAAGGGCAGTaGTGGGGATGCTGCCGCATCCTCTGGGGCAGGTCCAGGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGARMKLGWQVREGQ*WGCCRILWGRSRDA Trigger: GGCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCGGACTTGCCATCCCAGTTTCATCCTCGCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | AGCCGTGAAAGCCCATCAGAAGCCGCACTGGCTACCTCCTTTAAGTaGATTCTTGTTGGTGGCCGCCGCCGCTGGCCCCCACGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRESPSEAALATSFK*ILVGGRRRWPPRTR Trigger: CCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGCTTTCACGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | GGAGCGAGGATGAAACTGGGATGGCAAGTCCGAGAAGGGCAGTGCTaGGGATGCTGCCGCATCCTCTGGGGCAGGTCCAGGGATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GARMKLGWQVREGQC*GCCRILWGRSRDAH Trigger: ATGGGCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCGGACTTGCCATCCCAGTTTCATCCTCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 90 bp | CCTGCAGGACTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTGGCTaGGCAATGACTCGGCACACACAGGCGGTGGTTCGCTGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGLVWPASVALQPG*AMTRHTQAVVRCPA Trigger: TGCTGGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | CTGGCTACCTCCTTTAAGTGGATTCTTGTTGGTGGCCGCCGCCGCTaGCCCCCACGTACCCGGTTCCGTGTCACATGCTCTAGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LATSFKWILVGGRRR*PPRTRFRVTCSRAQ Trigger: CTGTGCCCTAGAGCATGTGACACGGAACCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGTTGATCCAGCCAGCCTaGTCTGCAGTCCGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LETQGSLREPEATGKGGGLIQPA*SAVRAP Trigger: TGGAGCACGGACTGCAGACAAGGCTGGCTGGATCAA...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CGAGGTCCTGCCCAGTCCTGCTGGCTGCCACAGCAGTGTGCTGGAGACTCAAGGCCTGCAGGAGTCTCCTaGCTGTCCTCAACTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGPAQSCWLPQQCAGDSRPAGVS*LSSTAE Trigger: CTCTGCAGTTGAGGACAGCAAGGAGACTCCTGCAGG...CCTTGAGTCTCCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 90 bp | GACTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTGGCTGAGCAATaGCTCGGCACACACAGGCGGTGGTTCGCTGCCCAGCACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLCGLPQLLYSLAEQ*LGTHRRWFAAQHLV Trigger: AACCAGGTGCTGGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 90 bp | CAGGGATGCCCATGGCCTGTAAGGCCGACTCAGGACCATCATCCATaGCATTCACAGACACCTGGGTCGGCTCTGGGGAAGTGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QGCPWPVRPTQDHHP*HSQTPGSALGKWSR Trigger: CCGAGACCACTTCCCCAGAGCCGACCCAGGTGTCTGTGAATGGCATGGATGATGGTCCTGAGTCGGCCTTACAGGCCATGGGCATCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTGGTCTCTGCATCCTCTaGGCTCTCAGGATTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSGLCIL*ALRIGP Trigger: GGGGCCAATCCTGAGAGCCAAGAGGATGCAGAGACC...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGCACAACTGGCGACTGGGAGCAGGGTGAGAGGAAAGGCCATCATGTGGCTTGTGGCCTGCCTCAGTaGCTCTACAGCCTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGTTGDWEQGERKGHHVACGLPQ*LYSLAE Trigger: CTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACA...AGCCACATGATGGCCTTTCCTCTCACCCTGCTCCCAGTCGCCAGTTGTGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | CTGGGACATCGAGGTCCAGCCGTGAAAGCCCATCAGAAGCCGCACTaGCTACCTCCTTTAAGTGGATTCTTGTTGGTGGCCGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGHRGPAVKAHQKPH*LPPLSGFLLVAAAA Trigger: AGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGCTTTCACGGCTGGACCTCGATGTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | CCTGGGGAAGGCTTGACAGGAGGCATGAGAGCCCGAGGTGGCTCCTaGGGCTGGTCTTCACTGATGTCACTGAGAGGAGCAAACACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGEGLTGGMRARGGS*GWSSLMSLRGANTG Trigger: ACCAGTGTTTGCTCCTCTCAGTGACATCAGTGAAGACCAGCCCCAGGAGCCACCTCGGGCTCTCATGCCTCCTGTCAAGCCTTCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | CTCTGGTCCTGGGGAAGGCTTGACAGGAGGCATGAGAGCCCGAGGTaGCTCCTGGGGCTGGTCTTCACTGATGTCACTGAGAGGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LWSWGRLDRRHESPR*LLGLVFTDVTERSK Trigger: TTTGCTCCTCTCAGTGACATCAGTGAAGACCAGCCCCAGGAGCCACCTCGGGCTCTCATGCCTCCTGTCAAGCCTTCCCCAGGACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | ATTTCCTGCAGGACTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTaGCTGAGCAATGACTCGGCACACACAGGCGGTGGTTCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISCRTCVACLSCSTA*LSNDSAHTGGGSLP Trigger: GGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGGAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CAGACGGTGCCATCCTGGAAACTCCAACCATGGTGCCAAAGCCCTGGGGGCAGTCCTTTAAGTGGATTCTaGTTGGTGGCCGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVPSWKLQPWCQSPGGSPLSGF*LVAAAA Trigger: AGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGG...ACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGGGTCCTGGGGAAGGCTaGACAGGAGGCATGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGHQEPQVLAKLDVPSGAGPGEG*TGGMRA Trigger: GGCTCTCATGCCTCCTGTCAAGCCTTCCCCAGGACC...CGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGAAAACACTCCTCTCACTAGGAAGTAAAGGAGGGGCAGCCCACCAGGACCAGCAGCTGGGCTaGGCAGAGAAGCAAGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGEKTLLSLGSKGGAAHQDQQLG*AEKQVA Trigger: CGCTACTTGCTTCTCTGCCAAGCCCAGCTGCTGGTC...CTGGTGGGCTGCCCCTCCTTTACTTCCTAGTGAGAGGAGTGTTTTCTCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGCGGTTGATCCCTTCGTaGAGAGCTTTGATCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CWRLKGRSESQRQRGREERLIPS*RALIQD Trigger: ATCCTGGATCAAAGCTCTCAACGAAGGGATCAACCG...CTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGCATCAACCACACAGACCACAGGACTATGCTCCATCCCAAGCCCAGAGCCTGTTTCGAAGCCACCTaGACTTCCAGCTGGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VCINHTDHRTMLHPKPRACFEAT*TSSWAR Trigger: TCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACA...GGCTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTGATGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAGACTCAAGGGTCGCTCAGAGAGCCAGAGGCAACGGGGAAGGGAGGAGGGCCTTCGTTGAGAGCTTaGATCCAGGATTCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LETQGSLREPEATGKGGGPSLRA*IQDSFS Trigger: AGAAAAGGAATCCTGGATCAAAGCTCTCAACGAAGG...CCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGAAAACACTCCTCTCACTAGGAAGTAAAGGAGGGGCAGCCCACCAGCGTCACTGTCCTCCTTaGCTGGGGTCTCTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGEKTLLSLGSKGGAAHQRHCPP*LGSLHP Trigger: AGGATGCAGAGACCCCAGCAAAGGAGGACAGTGACG...CTGGTGGGCTGCCCCTCCTTTACTTCCTAGTGAGAGGAGTGTTTTCTCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 90 bp | AGCCCAGGGGTTTCTTGGTTCAGTTCTCCCAAATCCCTCATTTCCTaGAGGACTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGVSWFSSPKSLIS*RTCVACLSCSTAWL Trigger: CAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGGAAATGAGGGATTTGGGAGAACTGAACCAAGAAACCCCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | CTCCGAAGAGGACAACTGTGCACTCTCAGGAGCAGAAGGCTTCTCTaGGCTGGGGTTCTCCCAGCTCACCTTCAGTTTCTCAGACAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRGQLCTLRSRRLL*AGVLPAHLQFLRQG Trigger: ACCTTGTCTGAGAAACTGAAGGTGAGCTGGGAGAACCCCAGCCCAGAGAAGCCTTCTGCTCCTGAGAGTGCACAGTTGTCCTCTTCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCATCAGGAGCCTCAAGTCCTGGCCAAACTTGATGTACCCAGTGGTGCGTTGATGTCACTGACCTaGTTCCCTGGGGATCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGHQEPQVLAKLDVPSGALMSLT*FPGDRS Trigger: GCTGCGATCCCCAGGGAACAAGGTCAGTGACATCAA...CGCACCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCTGAAGACCAGAAGATGGGAGCCTCAGGCAGGTCAGCTGGGCTCTACCTCAAAAGCCTTGTTCTaGCCTCGGTTGATCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ICLKTRRWEPQAGQLGSTSKALF*PRLIPS Trigger: CGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGA...GGTAGAGCCCAGCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTTCAGGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 90 bp | ATGTCACTGACCTTGTTCCCTGGGGATCGCAGCAGGATAAAGCGGTaGTGTTTCCGCTTGAGGAGAGTCCGGAGATCCTGGCACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSLTLFPGDRSRIKR*CFRLRRVRRSWHFS Trigger: TGAGAAGTGCCAGGATCTCCGGACTCTCCTCAAGCGGAAACATCACCGCTTTATCCTGCTGCGATCCCCAGGGAACAAGGTCAGTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 90 bp | TTCAGTTCTCCCAAATCCCTCATTTCCTGCAGGACTTGTGTGGCCTaGCTCAGTTGCTCTACAGCCTGGCTGAGCAATGACTCGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSPKSLISCRTCVA*LSCSTAWLSNDSAH Trigger: GTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGGAAATGAGGGATTTGGGAGAACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | AAGAGGACAACTGTGCACTCTCAGGAGCAGAAGGCTTCTCTGGGCTaGGGTTCTCCCAGCTCACCTTCAGTTTCTCAGACAAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRTTVHSQEQKASLG*GSPSSPSVSQTRCC Trigger: ACAGCACCTTGTCTGAGAAACTGAAGGTGAGCTGGGAGAACCCCAGCCCAGAGAAGCCTTCTGCTCCTGAGAGTGCACAGTTGTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | AGCAATGACTCGGCACACACAGGCGGTGGTTCGCTGCCCAGCACCTaGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACCTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNDSAHTGGGSLPST*FNNFSVCFEATLTS Trigger: GGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCAGGTGCTGGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 90 bp | CCAGCACCTGGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACCTTaGCTTCCAGCTGGGCCCGATACAACTTCTCCTTGGGCAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGSTISLSVSKPP*LPAGPDTTSPWAVV Trigger: CACGACTGCCCAAGGAGAAGTTGTATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCAGGTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATGGCAGGGGATCAAGACTGGACACCTGAGGACATTCTTGCTCTTGTACATTTCCTGCAGGACTaGTGTGGCCTGCCTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKMAGDQDWTPEDILALVHFLQD*CGLPQL Trigger: CAACTGAGGCAGGCCACACAAGTCCTGCAGGAAATG...TACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 90 bp | AGGGTCACCAGCTCCTTCCGTTTTTGCACTAGCCCAGGGGTTTCTTaGTTCAGTTCTCCCAAATCCCTCATTTCCTGCAGGACTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVTSSFRFCTSPGVS*FSSPKSLISCRTCV Trigger: CACACAAGTCCTGCAGGAAATGAGGGATTTGGGAGAACTGAACCAAGAAACCCCTGGGCTAGTGCAAAAACGGAAGGAGCTGGTGACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 72 bp | GGCCTGCCTCAGTTGCTCTACAGCCTGGCTGAGCAATaGCTCGGCACACACAGGCGGTGGTTCGCTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLPQLLYSLAEQ*LGTHRRWFAAQ Trigger: CTGGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | GGGATGCTGCCGCATCCTCTGGGGCAGGTCCAGGGATaGCCATGGCCTGTAAGGCCGACTCAGGACCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GMLPHPLGQVQG*PWPVRPTQDHH Trigger: ATGATGGTCCTGAGTCGGCCTTACAGGCCATGGGCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | CTGCCGCATCCTCTGGGGCAGGTCCAGGGATGCCCATaGCCTGTAAGGCCGACTCAGGACCATCATCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LPHPLGQVQGCP*PVRPTQDHHPC Trigger: GCATGGATGATGGTCCTGAGTCGGCCTTACAGGCCATGGGCATCCCTGGACCTGCCCCAGAGGATGCGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 72 bp | AAGCCGCACTGGCTACCTCCTTTAAGTGGATTCTTGTaGGTGGCCGCCGCCGCTGGCCCCCACGTACCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: KPHWLPPLSGFL*VAAAAGPHVPG Trigger: ACCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 90 bp | GCCCATCAGAAGCCGCACTGGCTACCTCCTTTAAGTGGATTCTTGTaGGTGGCCGCCGCCGCTGGCCCCCACGTACCCGGTTCCGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AHQKPHWLPPLSGFL*VAAAAGPHVPGSVS Trigger: TGACACGGAACCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 90 bp | AAAGCCCATCAGAAGCCGCACTGGCTACCTCCTTTAAGTGGATTCTaGTTGGTGGCCGCCGCCGCTGGCCCCCACGTACCCGGTTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAHQKPHWLPPLSGF*LVAAAAGPHVPGSV Trigger: CACGGAACCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 90 bp | TCCTTGCTGTCCTCAACTGCAGAGGTCTCTGGTCCTGGGGAAGGCTaGACAGGAGGCATGAGAGCCCGAGGTGGCTCCTGGGGCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLSSTAEVSGPGEG*TGGMRARGGSWGWS Trigger: AGACCAGCCCCAGGAGCCACCTCGGGCTCTCATGCCTCCTGTCAAGCCTTCCCCAGGACCAGAGACCTCTGCAGTTGAGGACAGCAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | AGCCCATCAGAAGCCGCACTGGCTACCTCCTTTAAGTaGATTCTTGTTGGTGGCCGCCGCCGCTGGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSEAALATSFK*ILVGGRRRWPP Trigger: TGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | ATGAAACTGGGATGGCAAGTCCGAGAAGGGCAGTGCTaGGGATGCTGCCGCATCCTCTGGGGCAGGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MKLGWQVREGQC*GCCRILWGRSR Trigger: CCTGGACCTGCCCCAGAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCGGACTTGCCATCCCAGTTTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 72 bp | CTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTGGCTaGGCAATGACTCGGCACACACAGGCGGTGGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVWPASVALQPG*AMTRHTQAVVR Trigger: GCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | CAGGGGTTAGGGCTCTCTCTCCTGCAGGAGTCTCCTTaGTGTCCTCAACTGCAGAGGTCTCTGGTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLGLSLLQESP*CPQLQRSLVLG Trigger: CCCCAGGACCAGAGACCTCTGCAGTTGAGGACAGCAAGGAGACTCCTGCAGGAGAGAGAGCCCTAACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | GGGGGTAGCCTCTGGAGTCTCCGAAGAGGACAACTGTaGACTCTCAGGAGCAGAAGGCTTCTCTGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSLWSLRRGQL*TLRSRRLLWAG Trigger: CCCAGCCCAGAGAAGCCTTCTGCTCCTGAGAGTGCACAGTTGTCCTCTTCGGAGACTCCAGAGGCTACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | TCCTTTAAGTGGATTCTTGTTGGTGGCCGCCGCCGCTaGCCCCCACGTACCCGGTTCCGTGTCACATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFKWILVGGRRR*PPRTRFRVTCS Trigger: AGAGCATGTGACACGGAACCGGGTACGTGGGGGCCAGCGGCGGCGGCCACCAACAAGAATCCACTTAAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | GGCTTGACAGGAGGCATGAGAGCCCGAGGTGGCTCCTaGGGCTGGTCTTCACTGATGTCACTGAGAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLTGGMRARGGS*GWSSLMSLRGA Trigger: TGCTCCTCTCAGTGACATCAGTGAAGACCAGCCCCAGGAGCCACCTCGGGCTCTCATGCCTCCTGTCAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | TGCCATTCACAGACACCTGGGTCGGCTCTGGGGAAGTaGTCTCGGGGGCCTCAGAACTCTGGGATGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHSQTPGSALGK*SRGPQNSGMNQ Trigger: CTGGTTCATCCCAGAGTTCTGAGGCCCCCGAGACCACTTCCCCAGAGCCGACCCAGGTGTCTGTGAATGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | CGCCGCTGGCCCCCACGTACCCGGTTCCGTGTCACATaGTCTAGGGCACAGGTCTTGTCTACTTTTACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRWPPRTRFRVT*SRAQVLSTFTS Trigger: TGAGGTAAAAGTAGACAAGACCTGTGCCCTAGAGCATGTGACACGGAACCGGGTACGTGGGGGCCAGCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | CCATGGCCTGTAAGGCCGACTCAGGACCATCATCCATaGCATTCACAGACACCTGGGTCGGCTCTGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PWPVRPTQDHHP*HSQTPGSALGK Trigger: CTTCCCCAGAGCCGACCCAGGTGTCTGTGAATGGCATGGATGATGGTCCTGAGTCGGCCTTACAGGCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | ATCATCCATGCCATTCACAGACACCTGGGTCGGCTCTaGGGAAGTGGTCTCGGGGGCCTCAGAACTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IIHAIHRHLGRL*GSGLGGLRTLG Trigger: TCCCAGAGTTCTGAGGCCCCCGAGACCACTTCCCCAGAGCCGACCCAGGTGTCTGTGAATGGCATGGATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | AGGACTTGTGTGGCCTGCCTCAGTTGCTCTACAGCCTaGCTGAGCAATGACTCGGCACACACAGGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RTCVACLSCSTA*LSNDSAHTGGG Trigger: ACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 72 bp | ACCTTGTTCCCTGGGGATCGCAGCAGGATAAAGCGGTaGTGTTTCCGCTTGAGGAGAGTCCGGAGATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLFPGDRSRIKR*CFRLRRVRRSW Trigger: CCAGGATCTCCGGACTCTCCTCAAGCGGAAACATCACCGCTTTATCCTGCTGCGATCCCCAGGGAACAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 72 bp | GCCCGATACAACTTCTCCTTGGGCAGTCGTGGATGCTaGGGGCTTTCTCTGAGTAGGTCCCCAAGGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARYNFSLGSRGC*GLSLSRSPREE Trigger: CTCTTCCCTTGGGGACCTACTCAGAGAAAGCCCTCAGCATCCACGACTGCCCAAGGAGAAGTTGTATCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | GCTCTTCTTGATCCAGCCAGCCTTGTCTGCAGTCCGTaGTCCACGAGGCTTCTCGCTCCCCTCCTTTATACT | + |
|
Preference number: 6 (lower is better) Translates to: ALLDPASLVCSP*STRLLAPLLYT Trigger: AGTATAAAGGAGGGGAGCGAGAAGCCTCGTGGAGCACGGACTGCAGACAAGGCTGGCTGGATCAAGAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | GGCTCTGGGGAAGTGGTCTCGGGGGCCTCAGAACTCTaGGATGAACCAGAAGCATCCACTCCACTCATACAA | + |
|
Preference number: 6 (lower is better) Translates to: GSGEVVSGASEL*DEPEASTPLIQ Trigger: TTGTATGAGTGGAGTGGATGCTTCTGGTTCATCCCAGAGTTCTGAGGCCCCCGAGACCACTTCCCCAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | TCGGCACACACAGGCGGTGGTTCGCTGCCCAGCACCTaGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SAHTGGGSLPST*FNNFSVCFEAT Trigger: GGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCAGGTGCTGGGCAGCGAACCACCGCCTGTGTGTGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS GCA 72 bp | CCCAAATCCCTCATTTCCTGCAGGACTTGTGTGGCCTaGCTCAGTTGCTCTACAGCCTGGCTGAGCAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: PKSLISCRTCVA*LSCSTAWLSND Trigger: GTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGGAAATGAGGGATTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | GTTGGGGAGACTTTTCACGTCACTGTCCTCCTTTGCTaGGGTCTCTGCATCCTCTTGGCTCTCAGGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGETFHVTVLLC*GLCILLALRIG Trigger: GCCAATCCTGAGAGCCAAGAGGATGCAGAGACCCCAGCAAAGGAGGACAGTGACGTGAAAAGTCTCCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 72 bp | GTTCAGTTCTCCCAAATCCCTCATTTCCTGCAGGACTaGTGTGGCCTGCCTCAGTTGCTCTACAGCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQFSQIPHFLQD*CGLPQLLYSLA Trigger: AGCCAGGCTGTAGAGCAACTGAGGCAGGCCACACAAGTCCTGCAGGAAATGAGGGATTTGGGAGAACTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 90 bp | CCCAGCACCTGGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACCTaGACTTCCAGCTGGGCCCGATACAACTTCTCCTTGGGCAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PSTWFNNFSVCFEAT*TSSWARYNFSLGSR Trigger: ACGACTGCCCAAGGAGAAGTTGTATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCAGGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | CCCAGCTCACCTTCAGTTTCTCAGACAAGGTGCTGTTaGGGAGACTTTTCACGTCACTGTCCTCCTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSPSVSQTRCC*GDFSRHCPPLL Trigger: CAGCAAAGGAGGACAGTGACGTGAAAAGTCTCCCCAACAGCACCTTGTCTGAGAAACTGAAGGTGAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CCA 72 bp | AGCTCCTTCCGTTTTTGCACTAGCCCAGGGGTTTCTTaGTTCAGTTCTCCCAAATCCCTCATTTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFRFCTSPGVS*FSSPKSLISCR Trigger: CCTGCAGGAAATGAGGGATTTGGGAGAACTGAACCAAGAAACCCCTGGGCTAGTGCAAAAACGGAAGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 72 bp | TCCCAGCTCACCTTCAGTTTCTCAGACAAGGTGCTGTaGGGGAGACTTTTCACGTCACTGTCCTCCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQLTFSFSDKVL*GRLFTSLSSFA Trigger: AGCAAAGGAGGACAGTGACGTGAAAAGTCTCCCCAACAGCACCTTGTCTGAGAAACTGAAGGTGAGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS TCA 72 bp | GGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACCTTaGCTTCCAGCTGGGCCCGATACAACTTCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSTISLSVSKPP*LPAGPDTTSPW Trigger: CCAAGGAGAAGTTGTATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 72 bp | ACCCGGTTCCGTGTCACATGCTCTAGGGCACAGGTCTaGTCTACTTTTACCTCATCAAAAGCCTTGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRFRVTCSRAQV*STFTSSKALFL Trigger: CAAGAACAAGGCTTTTGATGAGGTAAAAGTAGACAAGACCTGTGCCCTAGAGCATGTGACACGGAACCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
||
| CDS CAA 72 bp | TGGTTCAACAATTTCTCTGTCTGTTTCGAAGCCACCTaGACTTCCAGCTGGGCCCGATACAACTTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WFNNFSVCFEAT*TSSWARYNFSL Trigger: CAAGGAGAAGTTGTATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS CAA 90 bp | AGGGCACAGGTCTTGTCTACTTTTACCTCATCAAAAGCCTTGTTCTaGCCTCGGTTGATCCCTTCGTTGAGAGCTTTGATCCAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: RAQVLSTFTSSKALF*PRLIPSLRALIQDS Trigger: GGAATCCTGGATCAAAGCTCTCAACGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGATGAGGTAAAAGTAGACAAGACCTGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS CAA 90 bp | TGCTCTAGGGCACAGGTCTTGTCTACTTTTACCTCATCAAAAGCCTaGTTCTTGCCTCGGTTGATCCCTTCGTTGAGAGCTTTGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: CSRAQVLSTFTSSKA*FLPRLIPSLRALIQ Trigger: CTGGATCAAAGCTCTCAACGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGATGAGGTAAAAGTAGACAAGACCTGTGCCCTAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS CAA 72 bp | ACTTTTACCTCATCAAAAGCCTTGTTCTTGCCTCGGTaGATCCCTTCGTTGAGAGCTTTGATCCAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: TFTSSKALFLPR*IPSLRALIQDS Trigger: GGAATCCTGGATCAAAGCTCTCAACGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGATGAGGTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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| CDS CAA 72 bp | GTCTTGTCTACTTTTACCTCATCAAAAGCCTTGTTCTaGCCTCGGTTGATCCCTTCGTTGAGAGCTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: VLSTFTSSKALF*PRLIPSLRALI Trigger: GATCAAAGCTCTCAACGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGATGAGGTAAAAGTAGACAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068944.9 |
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