Pregenerated sensors for PLEKHO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015745Ensembl transcript IDs: ENSMUST00000015889.10, ENSMUST00000123006.8, ENSMUST00000130043.8, ENSMUST00000143485.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTaGCTGGGGGCAGGTGGCCTATGCATAGCAAAAGGTCTGCTTATA | + |
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Preference number: 1 (lower is better) Translates to: LTQTPACVHPGRSLL*LGAGGLCIAKGLLI Trigger: TATAAGCAGACCTTTTGCTATGCATAGGCCACCTGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR CCA 90 bp | CTCTATACTTGGGCCTCAAGGCTCAATCTGACTAGGGAGTTGACATaGGAAGTCGGTCGGAAAAAGCCACAGTGGTTGAGGCGGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LYTWASRLNLTRELT*EVGRKKPQWLRRQQ Trigger: TTGCTGCCGCCTCAACCACTGTGGCTTTTTCCGACCGACTTCCCATGTCAACTCCCTAGTCAGATTGAGCCTTGAGGCCCAAGTATAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCAACTAGGGAGTTGACATaGGAAGTCGGTCGGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TQTPACVHPGRSLLCLGATRELT*EVGRKK Trigger: CTTTTTCCGACCGACTTCCCATGTCAACTCCCTAGT...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCAGAGCTCTCTATACTTaGGCCTCAAGGCTCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGRALYT*ASRLNL Trigger: CAGATTGAGCCTTGAGGCCCAAGTATAGAGAGCTCT...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR GCA 72 bp | ACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTaGCTGGGGGCAGGTGGCCTATGCATAGCAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: TPACVHPGRSLL*LGAGGLCIAKG Trigger: ACCTTTTGCTATGCATAGGCCACCTGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR TCA 72 bp | CTGGCCCCTGTGTCCCTAGAACTCAAGTTGCAGAGCTaGAATTTCAGCCTCAGAGTGAGAACCTGGGACATC | + |
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Preference number: 3 (lower is better) Translates to: LAPVSLELKLQS*NFSLRVRTWDI Trigger: GATGTCCCAGGTTCTCACTCTGAGGCTGAAATTTCAGCTCTGCAACTTGAGTTCTAGGGACACAGGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR-3UTR CAA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTTTTATCCTGCAACATTaGGAGATAAAGAGTCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: HSNPDARLCASGTIPTVPFILQH*EIKSLC Trigger: GCACAGACTCTTTATCTCCAAATGTTGCAGGATAAA...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCAAAAAGCCACAGTGGTaGAGGCGGCAGCAAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGKKPQW*RRQQKQ Trigger: TTGCTTTTGCTGCCGCCTCAACCACTGTGGCTTTTT...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR-3UTR CAA 90 bp | ACTCAAGTTGCAGAGCTGAAATTTCAGCCTCAGAGTGAGAACCTGGGACATCTGAATCTGACTAGGGAGTaGACATGGGAAGTCGGTCGG | + |
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Preference number: 3 (lower is better) Translates to: TQVAELKFQPQSENLGHLNLTRE*TWEVGR Trigger: CCGACCGACTTCCCATGTCAACTCCCTAGTCAGATT...CAGATGTCCCAGGTTCTCACTCTGAGGCTGAAATTTCAGCTCTGCAACTTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | AACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCCCGGGACAGCTGCCCTaGCTGGGCAGGGACAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NPDARLCASGTIPTVPGGPGQLP*LGRDRG Trigger: CCCCCTGTCCCTGCCCAGCCAGGGCAGCTGTCCCGG...GCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCAGAGGTGTCCCCGGGTTaGAGGACGGCGGGAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGAEVSPG*RTAGVL Trigger: CAACACTCCCGCCGTCCTCCAACCCGGGGACACCTC...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | AACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCGAGGTCTGTCTGAGGTaGGAGTCCGGGGTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NPDARLCASGTIPTVPGGEVCLR*ESGVCR Trigger: CCTGCAGACCCCGGACTCCCACCTCAGACAGACCTC...GCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCACCTTGGCCTTCCGCTTaGCGTCACCCAGTCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGAPWPSA*RHPVPE Trigger: TTCAGGGACTGGGTGACGGCAAGCGGAAGGCCAAGG...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | GCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGTCGGGCGCCGCAGACTaGTGGTTTCCATCCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AHSNPDARLCASGTIPTVSGAAD*WFPSGG Trigger: GCCTCCGGATGGAAACCATCAGTCTGCGGCGCCCGA...CACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | CCAGCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTTCACGGCCAGGAAGATaGGGTTGGGTGCCGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PAHSNPDARLCASGTIPTSRPGR*GWVPWC Trigger: GCACCACGGCACCCAACCTCATCTTCCTGGCCGTGA...AGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTCCGTCACCCAGTCCCTaGACCTCTGCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSNPDARLCASGTIPTVPPSPSP*TSASSS Trigger: GGAGCTGCTGGCAGAGGTTCAGGGACTGGGTGACGG...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGTCGGGTGGAGACTGTaGGGGGTCCTTGGCCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HSNPDARLCASGTIPTVPVGWRL*GVLGLP Trigger: CGGAAGGCCAAGGACCCCCCACAGTCTCCACCCGAC...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCAAGCACTCTCTTTGCCTaGCTCCAGTTGGAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGASTLFA*LQLEEA Trigger: GGCTTCCTCCAACTGGAGCCAGGCAAAGAGAGTGCT...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGCTGGATCCTGTCTaGGTCCGCTCTCCGTCGACT | + |
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Preference number: 4 (lower is better) Translates to: HSNPDARLCASGTIPTVPGLDPV*VRSPST Trigger: AGTCGACGGAGAGCGGACTCAGACAGGATCCAGCCC...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCACTTCTCCAGTTTCCTTaGTACCAGGTCCTGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGALLQFP*YQVLDP Trigger: CGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAG...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | GCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGTGGGAGTCCGGGGTCTaGAGGTCCATCTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: AHSNPDARLCASGTIPTVWESGV*RSICLY Trigger: GTACAGGCAGATGGACCTGCAGACCCCGGACTCCCA...CACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | GCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCGACTGCCAGCCAGCTaGGCCACAGACTTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AHSNPDARLCASGTIPTVRLPAS*ATDLSR Trigger: TCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCG...CACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTTTGCCTGGCTCCAGTTaGAGGAAGCCTCTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAHSNPDARLCASGTIPTLPGSS*RKPLPA Trigger: TGCTGGGAGAGGCTTCCTCCAACTGGAGCCAGGCAA...AGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCAGATTTTTCTTGCTCCTaGTCTTGGATTTCCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGADFSCS*SWISGA Trigger: AGCTCCGGAAATCCAAGAGCAGGAGCAAGAAAAATC...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | GTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCCCCTGTGTCCCTCCGCTCTCCGTCGACTaGCAGCCAGCTGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: VNFTSLMAWTGGTGPCVPPLSVD*QPAGPQ Trigger: CTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGCGG...AGGGACACAGGGGCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCGACAGCTGCCCTGGCTaGGCAGGGACAGGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGDSCPG*AGTGGR Trigger: CCTACCCCCTGTCCCTGCCCAGCCAGGGCAGCTGTC...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGGGGGCATGCTGTGATTTTTCTTaGTCCTGCTCTTGGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TQTPACVHPGRSLLCLGACCDFS*SCSWIS Trigger: GGAAATCCAAGAGCAGGAGCAAGAAAAATCACAGCA...TGCCCCCAGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | GCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGAGGGTGAACTTGCTGTaGTTTTTCTTGCTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AHSNPDARLCASGTIPTVRVNLL*FFLLLL Trigger: GAGCAGGAGCAAGAAAAATCACAGCAAGTTCACCCT...CACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCAGGCTGCTTGCCCGCTaGGAAGAGGGCTGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGRLLAR*EEGWIL Trigger: CAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCT...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | TCTCTAATGGCATGGACAGGTGGCACTGGCCCCTGTGTCCCTAGAACTCAAGTTCTCAGCACAAGAGGCTaGCTCCTCAGGGGAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLMAWTGGTGPCVPRTQVLSTRG*LLRGRV Trigger: GACCCTTCCCCTGAGGAGCCAGCCTCTTGTGCTGAG...AACTTGAGTTCTAGGGACACAGGGGCCAGTGCCACCTGTCCATGCCATTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCGTGAAGGGGGCGGGCTaGGGCAGTGTCCCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGVKGAG*GSVPLG Trigger: TCCCAGAGGGACACTGCCCCAGCCCGCCCCCTTCAC...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGAAGGGTCTTCCTCTTaGATCAGGTCTAATGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: PAHSNPDARLCASGTIPTEGSSS*IRSNVS Trigger: GCTAACATTAGACCTGATCCAAGAGGAAGACCCTTC...AGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCGGGGCAGTGTCCCTCTaGGATAGGATCTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGGAVSL*DRISSR Trigger: CCTGGAGGAGATCCTATCCCAGAGGGACACTGCCCC...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTTGCAGAGCTGAAATTTCAGCCTCAGAGTGAGAACCTGGGACATCTGTCGAAGCCACAGCCATaGGGTGTCCCCGGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TQVAELKFQPQSENLGHLSKPQP*GVPGLE Trigger: CTCCAACCCGGGGACACCTCATGGCTGTGGCTTCGA...CAGATGTCCCAGGTTCTCACTCTGAGGCTGAAATTTCAGCTCTGCAACTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCAGGCTCTTCCGGTATTaGCTGTGCTGGGAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGRLFRY*LCWEVC Trigger: ACAGACCTCCCAGCACAGTCAATACCGGAAGAGCCT...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCCAGTCCCTGAACCTCTaGCAGCAGCTCCTGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRAQVNFTSLMAWTGGTGQSLNL*QQLLSL Trigger: AAGACTCAGGAGCTGCTGGCAGAGGTTCAGGGACTG...GCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCCGCTGCGAAGAGGGCTaGATCCTGTCTGAGTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGRCEEG*ILSESA Trigger: AGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCG...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | GTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCCCCTGTGTCCCTTCTTGCTCCTGCTCTTaGATTTCCGGAGCTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: VNFTSLMAWTGGTGPCVPSCSCS*ISGALR Trigger: GCGAAGAGCTCCGGAAATCCAAGAGCAGGAGCAAGA...AGGGACACAGGGGCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ATTCTTTGTACAGGTGAGAGCTCTCTATACTTGGGCCTCAAGGCTCAATCTGACAGCTCCCGGACTTCCTaGAGCACTCTCTTTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ILCTGESSLYLGLKAQSDSSRTS*STLFAW Trigger: CCAGGCAAAGAGAGTGCTGCAGGAAGTCCGGGAGCT...GTCAGATTGAGCCTTGAGGCCCAAGTATAGAGAGCTCTCACCTGTACAAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ACTCAAGTTGCAGAGCTGAAATTTCAGCCTCAGAGTGAGAACCTGGGACATCTGGTCTGCAGGTCCATCTaGCTGTACAGGTCTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TQVAELKFQPQSENLGHLVCRSI*LYRSLS Trigger: GCTGAGAGACCTGTACAGGCAGATGGACCTGCAGAC...CAGATGTCCCAGGTTCTCACTCTGAGGCTGAAATTTCAGCTCTGCAACTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| 3UTR CAA 72 bp | TATACTTGGGCCTCAAGGCTCAATCTGACTAGGGAGTaGACATGGGAAGTCGGTCGGAAAAAGCCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: YTWASRLNLTRE*TWEVGRKKPQW Trigger: CCACTGTGGCTTTTTCCGACCGACTTCCCATGTCAACTCCCTAGTCAGATTGAGCCTTGAGGCCCAAGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTTGCAGAGCTGAAATTTCAGCCTCAGAGTGAGAACCTGGGACATCTGCAGGGCGTTGATCCATaGCTCCTTCTCTTCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TQVAELKFQPQSENLGHLQGVDP*LLLFRT Trigger: AGTCCTGAAGAGAAGGAGTCATGGATCAACGCCCTG...CAGATGTCCCAGGTTCTCACTCTGAGGCTGAAATTTCAGCTCTGCAACTTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | GTGAGAGCTCTCTATACTTGGGCCTCAAGGCTCAATCTGACTAGGGAGTTGACAGGCTCTTCTCTGTACTaGGGAACTTCTTCAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VRALYTWASRLNLTRELTGSSLY*GTSSVL Trigger: AAGCACTGAAGAAGTTCCCCAGTACAGAGAAGAGCC...TGTCAACTCCCTAGTCAGATTGAGCCTTGAGGCCCAAGTATAGAGAGCTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR GCA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCGGAGTGTTGGATTTTTaGTCTGTCTCGAGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGGVLDF*SVSSRV Trigger: CACCCTACTCGAGACAGAGCAAAAATCCAACACTCC...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR TCA 90 bp | GTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCCCCTGTGTCCCTAGGTCAAACACCTCCTaGCTGTTTTTCTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VNFTSLMAWTGGTGPCVPRSNTS*LFFSSF Trigger: AAAAGATGAGAAAAACAGTCAGGAGGTGTTTGACCT...AGGGACACAGGGGCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CCA 90 bp | ATGCATAGCAAAAGGTCTGCTTATATTATTCTTTGTACAGGTGAGAGCTCTCTAGGACGGCGGGAGTGTTaGATTTTTGCTCTGTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: MHSKRSAYIILCTGESSLGRREC*IFALSR Trigger: TCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCC...TAGAGAGCTCTCACCTGTACAAAGAATAATATAAGCAGACCTTTTGCTATGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS TCA 90 bp | CCGAGAAAGGCTGCTTGCCCGCTGCGAAGAGGGCTGGATCCTGTCTaGGTCCGCTCTCCGTCGACTGCCAGCCAGCTGGGCCACAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRKAACPLRRGLDPV*VRSPSTASQLGHRL Trigger: AAGTCTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS-3UTR CAA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTGCCAGGAAGATGAGGTaGGGTGCCGTGGTGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSNPDARLCASGTIPTVPARKMR*GAVVPG Trigger: GCCGGGCACCACGGCACCCAACCTCATCTTCCTGGC...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS CCA 90 bp | TTTTCCCAAGGCCGAGAAAGGCTGCTTGCCCGCTGCGAAGAGGGCTaGATCCTGTCTGAGTCCGCTCTCCGTCGACTGCCAGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSQGRERLLARCEEG*ILSESALRRLPASW Trigger: CCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS GCA 90 bp | TCCCTGAACCTCTGCCAGCAGCTCCTGAGTCTTCTCCAGTTTCCTTaGTACCAGGTCCTGGATCCGGGACAGCTGCCCTGGCTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLNLCQQLLSLLQFP*YQVLDPGQLPWLGR Trigger: CCTGCCCAGCCAGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGACTCAGGAGCTGCTGGCAGAGGTTCAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS GCA 90 bp | TGGGAGGTCTGTCTGAGGTGGGAGTCCGGGGTCTGCAGGTCCATCTaGCTGTACAGGTCTCTCAGCTCCCGGACTTCCTGCAGCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WEVCLRWESGVCRSI*LYRSLSSRTSCSTL Trigger: GAGAGTGCTGCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGATGGACCTGCAGACCCCGGACTCCCACCTCAGACAGACCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS CCA 90 bp | GGCTGGATCCTGTCTGAGTCCGCTCTCCGTCGACTGCCAGCCAGCTaGGCCACAGACTTGTCCAGATCGACCCGGAAGCTCTCAGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GWILSESALRRLPAS*ATDLSRSTRKLSAQ Trigger: TTGTGCTGAGAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGACAGGATCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS GCA 90 bp | TGTAGGGGGCTCCCTTGTCTGGTTTTTCCCAAGGCCGAGAAAGGCTaGTTGCCCGCTGCGAAGAGGGCTGGATCCTGTCTGAGTCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRGLPCLVFPKAEKG*LPAAKRAGSCLSPL Trigger: GAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAACCAGACAAGGGAGCCCCCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS GCA 90 bp | GGGGTCCTTGGCCTTCCGCTTGCCGTCACCCAGTCCCTGAACCTCTaGCAGCAGCTCCTGAGTCTTCTCCAGTTTCCTTGCTACCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLGLPLAVTQSLNL*QQLLSLLQFPCYQV Trigger: GACCTGGTAGCAAGGAAACTGGAGAAGACTCAGGAGCTGCTGGCAGAGGTTCAGGGACTGGGTGACGGCAAGCGGAAGGCCAAGGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS TCA 90 bp | GCCGTGGTGCCCGGCTGTCTGCACCGGGCCAGGGTGAACTTGCTGTaGTTTTTCTTGCTCCTGCTCTTGGATTTCCGGAGCTCTTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVVPGCLHRARVNLL*FFLLLLLDFRSSSH Trigger: GTGCGAAGAGCTCCGGAAATCCAAGAGCAGGAGCAAGAAAAATCACAGCAAGTTCACCCTGGCCCGGTGCAGACAGCCGGGCACCACGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS GCA 90 bp | TGCAGGTCCATCTGCCTGTACAGGTCTCTCAGCTCCCGGACTTCCTaGAGCACTCTCTTTGCCTGGCTCCAGTTGGAGGAAGCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRSICLYRSLSSRTS*STLFAWLQLEEASP Trigger: GGGAGAGGCTTCCTCCAACTGGAGCCAGGCAAAGAGAGTGCTGCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGATGGACCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCCATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTTTCTTGCTCCTGCTCTaGGATTTCCGGAGCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAHSNPDARLCASGTIPTFLLLL*DFRSSS Trigger: CGAAGAGCTCCGGAAATCCAAGAGCAGGAGCAAGAA...AGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATGGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CAA 90 bp | CATTCTAACCCAGACGCCCGCCTGTGTGCATCCGGGACGATCCCTACTGTGCCTAGGACGGCGGGAGTGTaGGATTTTTGCTCTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSNPDARLCASGTIPTVPRTAGV*DFCSVS Trigger: CGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCT...AGGCACAGTAGGGATCGTCCCGGATGCACACAGGCGGGCGTCTGGGTTAGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS GCA 90 bp | CATGAGGTGTCCCCGGGTTGGAGGACGGCGGGAGTGTTGGATTTTTaGTCTGTCTCGAGTAGGGTGGGCAAGATAGCTGTCCTCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEVSPGWRTAGVLDF*SVSSRVGKIAVLLN Trigger: GTTGAGGAGGACAGCTATCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
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| CDS CCA 90 bp | GGGATAGGATCTCCTCCAGGGAGGCACATCGGCTCTTCTCTGTACTaGGGAACTTCTTCAGTGCTTGTGGGGTGTAGGGGGCTCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GIGSPPGRHIGSSLY*GTSSVLVGCRGLPC Trigger: ACAAGGGAGCCCCCTACACCCCACAAGCACTGAAGAAGTTCCCCAGTACAGAGAAGAGCCGATGTGCCTCCCTGGAGGAGATCCTATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS-3UTR CAA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCTCCGGAGGCCCCCGCTaGCCGGAGCCGCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGSGGPR*PEPLFF Trigger: GAAGAAGAGCGGCTCCGGCAAGCGGGGGCCTCCGGA...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS TCA 90 bp | GCTGGTCGCCTTTCAGCACCACATAGCGGTTTTTCCAAATCTCCCTaGAAATCCCTTTCCCGCAGAATTTCCGGACCCAGCCGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGRLSAPHSGFSKSP*KSLSRRISGPSRPS Trigger: AGAAGGTCGGCTGGGTCCGGAAATTCTGCGGGAAAGGGATTTTCAGGGAGATTTGGAAAAACCGCTATGTGGTGCTGAAAGGCGACCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS CCA 90 bp | CTCTCAGCACAAGAGGCTGGCTCCTCAGGGGAAGGGTCTTCCTCTTaGATCAGGTCTAATGTTAGCATCCCATCTGAGGTAGAGGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSAQEAGSSGEGSSS*IRSNVSIPSEVEVE Trigger: TTCGACCTCTACCTCAGATGGGATGCTAACATTAGACCTGATCCAAGAGGAAGACCCTTCCCCTGAGGAGCCAGCCTCTTGTGCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS-3UTR CAA 90 bp | ATCCTTCTCAGGGCTCAGGTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCAGCTGGGCCACAGACTaGTCCAGATCGACCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLRAQVNFTSLMAWTGGSWATD*SRSTRK Trigger: CTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCT...GCCACCTGTCCATGCCATTAGAGAAGTGAAATTTACCTGAGCCCTGAGAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS TCA 90 bp | ACGGTTTTTAGCTCTGGTAATGGCAGAACTCAGGGCGTTGATCCATaGCTCCTTCTCTTCAGGACTCACGGCCAGGAAGATGAGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVFSSGNGRTQGVDP*LLLFRTHGQEDEVG Trigger: CCCAACCTCATCTTCCTGGCCGTGAGTCCTGAAGAGAAGGAGTCATGGATCAACGCCCTGAGTTCTGCCATTACCAGAGCTAAAAACCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS-3UTR CAA 90 bp | GTAAATTTCACTTCTCTAATGGCATGGACAGGTGGCACTGGCCCCTGTGTCCCTTCTTCTCCAGTTTCCTaGCTACCAGGTCCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VNFTSLMAWTGGTGPCVPSSPVS*LPGPGS Trigger: GGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGA...AGGGACACAGGGGCCAGTGCCACCTGTCCATGCCATTAGAGAAGTGAAATTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CAA 90 bp | ATTCTTTGTACAGGTGAGAGCTCTCTATACTTGGGCCTCAAGGCTCAATCTGACCAGGCTCTTCCGGTATaGACTGTGCTGGGAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILCTGESSLYLGLKAQSDQALPV*TVLGGL Trigger: CAGACCTCCCAGCACAGTCAATACCGGAAGAGCCTG...GTCAGATTGAGCCTTGAGGCCCAAGTATAGAGAGCTCTCACCTGTACAAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS-3UTR CAA 90 bp | ATGCATAGCAAAAGGTCTGCTTATATTATTCTTTGTACAGGTGAGAGCTCTCTAGAACTTCTTCAGTGCTaGTGGGGTGTAGGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MHSKRSAYIILCTGESSLELLQC*WGVGGS Trigger: GGAGCCCCCTACACCCCACAAGCACTGAAGAAGTTC...TAGAGAGCTCTCACCTGTACAAAGAATAATATAAGCAGACCTTTTGCTATGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015889.10 |
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| CDS TCA 72 bp | GCTGCTTGCCCGCTGCGAAGAGGGCTGGATCCTGTCTaGGTCCGCTCTCCGTCGACTGCCAGCCAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AACPLRRGLDPV*VRSPSTASQLG Trigger: GCCCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS GCA 72 bp | CTCTTCAGGACTCACGGCCAGGAAGATGAGGTTGGGTaGCGTGGTGCCCGGCTGTCTGCACCGGGCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LFRTHGQEDEVG*RGARLSAPGQG Trigger: ACCCTGGCCCGGTGCAGACAGCCGGGCACCACGGCACCCAACCTCATCTTCCTGGCCGTGAGTCCTGAAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS CCA 72 bp | GGCCGAGAAAGGCTGCTTGCCCGCTGCGAAGAGGGCTaGATCCTGTCTGAGTCCGCTCTCCGTCGACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRERLLARCEEG*ILSESALRRLP Trigger: TGGCAGTCGACGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CCA 72 bp | CTGTCTGAGTCCGCTCTCCGTCGACTGCCAGCCAGCTaGGCCACAGACTTGTCCAGATCGACCCGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSESALRRLPAS*ATDLSRSTRKL Trigger: GAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 90 bp | TCTGAGTCCGCTCTCCGTCGACTGCCAGCCAGCTGGGCCACAGACTaGTCCAGATCGACCCGGAAGCTCTCAGCACAAGAGGCTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SESALRRLPASWATD*SRSTRKLSAQEAGS Trigger: GGAGCCAGCCTCTTGTGCTGAGAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGCGGACTCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 90 bp | ATCCATGACTCCTTCTCTTCAGGACTCACGGCCAGGAAGATGAGGTaGGGTGCCGTGGTGCCCGGCTGTCTGCACCGGGCCAGGGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: IHDSFSSGLTARKMR*GAVVPGCLHRARVN Trigger: GTTCACCCTGGCCCGGTGCAGACAGCCGGGCACCACGGCACCCAACCTCATCTTCCTGGCCGTGAGTCCTGAAGAGAAGGAGTCATGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS CAA 90 bp | AGGGGGCTCCCTTGTCTGGTTTTTCCCAAGGCCGAGAAAGGCTGCTaGCCCGCTGCGAAGAGGGCTGGATCCTGTCTGAGTCCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLPCLVFPKAEKGC*PAAKRAGSCLSPLS Trigger: GGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAACCAGACAAGGGAGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 90 bp | GTCCCTGAACCTCTGCCAGCAGCTCCTGAGTCTTCTCCAGTTTCCTaGCTACCAGGTCCTGGATCCGGGACAGCTGCCCTGGCTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPEPLPAAPESSPVS*LPGPGSGTAALAGQ Trigger: CTGCCCAGCCAGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGACTCAGGAGCTGCTGGCAGAGGTTCAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS GCA 72 bp | TGTCTGAGGTGGGAGTCCGGGGTCTGCAGGTCCATCTaGCTGTACAGGTCTCTCAGCTCCCGGACTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLRWESGVCRSI*LYRSLSSRTSC Trigger: GCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGATGGACCTGCAGACCCCGGACTCCCACCTCAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS CAA 72 bp | GCTCTCCGTCGACTGCCAGCCAGCTGGGCCACAGACTaGTCCAGATCGACCCGGAAGCTCTCAGCACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALRRLPASWATD*SRSTRKLSAQE Trigger: CTCTTGTGCTGAGAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGACGGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS TCA 72 bp | GTGCCGTGGTGCCCGGCTGTCTGCACCGGGCCAGGGTaGACTTGCTGTGATTTTTCTTGCTCCTGCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VPWCPAVCTGPG*TCCDFSCSCSW Trigger: CCAAGAGCAGGAGCAAGAAAAATCACAGCAAGTTCACCCTGGCCCGGTGCAGACAGCCGGGCACCACGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS TCA 72 bp | ATGACTCCTTCTCTTCAGGACTCACGGCCAGGAAGATaGGGTTGGGTGCCGTGGTGCCCGGCTGTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: MTPSLQDSRPGR*GWVPWCPAVCT Trigger: GGTGCAGACAGCCGGGCACCACGGCACCCAACCTCATCTTCCTGGCCGTGAGTCCTGAAGAGAAGGAGTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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| CDS GCA 72 bp | CTCTGCCAGCAGCTCCTGAGTCTTCTCCAGTTTCCTTaGTACCAGGTCCTGGATCCGGGACAGCTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCQQLLSLLQFP*YQVLDPGQLPW Trigger: CCAGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGACTCAGGAGCTGCTGGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS GCA 72 bp | CTCCCTTGTCTGGTTTTTCCCAAGGCCGAGAAAGGCTaGTTGCCCGCTGCGAAGAGGGCTGGATCCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPCLVFPKAEKG*LPAAKRAGSCL Trigger: CAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAACCAGACAAGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CCA 72 bp | AGAGGTCGAAGCCACAGCCATGAGGTGTCCCCGGGTTaGAGGACGGCGGGAGTGTTGGATTTTTGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGRSHSHEVSPG*RTAGVLDFCSV Trigger: GACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCATGGCTGTGGCTTCGACCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
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| CDS CCA 72 bp | GTCCAGATCGACCCGGAAGCTCTCAGCACAAGAGGCTaGCTCCTCAGGGGAAGGGTCTTCCTCTTGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQIDPEALSTRG*LLRGRVFLLDQ Trigger: CTGATCCAAGAGGAAGACCCTTCCCCTGAGGAGCCAGCCTCTTGTGCTGAGAGCTTCCGGGTCGATCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 72 bp | CATGAGGTGTCCCCGGGTTGGAGGACGGCGGGAGTGTaGGATTTTTGCTCTGTCTCGAGTAGGGTGGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HEVSPGWRTAGV*DFCSVSSRVGK Trigger: CTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
||
| CDS CAA 90 bp | AGCCACAGCCATGAGGTGTCCCCGGGTTGGAGGACGGCGGGAGTGTaGGATTTTTGCTCTGTCTCGAGTAGGGTGGGCAAGATAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SHSHEVSPGWRTAGV*DFCSVSSRVGKIAV Trigger: GACAGCTATCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCATGGCTGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
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| CDS GCA 72 bp | TCCCCGGGTTGGAGGACGGCGGGAGTGTTGGATTTTTaGTCTGTCTCGAGTAGGGTGGGCAAGATAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPGWRTAGVLDF*SVSSRVGKIAV Trigger: GACAGCTATCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
||
| CDS CCA 72 bp | ATGAGGTGTCCCCGGGTTGGAGGACGGCGGGAGTGTTaGATTTTTGCTCTGTCTCGAGTAGGGTGGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: MRCPRVGGRREC*IFALSRVGWAR Trigger: TCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000130043.8 |
||
| CDS CCA 72 bp | TCTCCTCCAGGGAGGCACATCGGCTCTTCTCTGTACTaGGGAACTTCTTCAGTGCTTGTGGGGTGTAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPPGRHIGSSLY*GTSSVLVGCRG Trigger: CCCCCTACACCCCACAAGCACTGAAGAAGTTCCCCAGTACAGAGAAGAGCCGATGTGCCTCCCTGGAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
||
| CDS CAA 72 bp | CCTTGTCTGGTTTTTCCCAAGGCCGAGAAAGGCTGCTaGCCCGCTGCGAAGAGGGCTGGATCCTGTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PCLVFPKAEKGC*PAAKRAGSCLS Trigger: ACTCAGACAGGATCCAGCCCTCTTCGCAGCGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAACCAGACAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS GCA 72 bp | ATCTGCCTGTACAGGTCTCTCAGCTCCCGGACTTCCTaGAGCACTCTCTTTGCCTGGCTCCAGTTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ICLYRSLSSRTS*STLFAWLQLEE Trigger: TTCCTCCAACTGGAGCCAGGCAAAGAGAGTGCTGCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 |
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| CDS TCA 72 bp | AGCTCTGGTAATGGCAGAACTCAGGGCGTTGATCCATaGCTCCTTCTCTTCAGGACTCACGGCCAGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSGNGRTQGVDP*LLLFRTHGQED Trigger: ATCTTCCTGGCCGTGAGTCCTGAAGAGAAGGAGTCATGGATCAACGCCCTGAGTTCTGCCATTACCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CCA 72 bp | CAAGAGGCTGGCTCCTCAGGGGAAGGGTCTTCCTCTTaGATCAGGTCTAATGTTAGCATCCCATCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QEAGSSGEGSSS*IRSNVSIPSEV Trigger: TACCTCAGATGGGATGCTAACATTAGACCTGATCCAAGAGGAAGACCCTTCCCCTGAGGAGCCAGCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 72 bp | CGGTTTTTAGCTCTGGTAATGGCAGAACTCAGGGCGTaGATCCATGACTCCTTCTCTTCAGGACTCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: RFLALVMAELRA*IHDSFSSGLTA Trigger: GGCCGTGAGTCCTGAAGAGAAGGAGTCATGGATCAACGCCCTGAGTTCTGCCATTACCAGAGCTAAAAACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS CAA 90 bp | TCCAAGATACGGTTTTTAGCTCTGGTAATGGCAGAACTCAGGGCGTaGATCCATGACTCCTTCTCTTCAGGACTCACGGCCAGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SKIRFLALVMAELRA*IHDSFSSGLTARKM Trigger: CATCTTCCTGGCCGTGAGTCCTGAAGAGAAGGAGTCATGGATCAACGCCCTGAGTTCTGCCATTACCAGAGCTAAAAACCGTATCTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 |
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| CDS TCA 72 bp | CTTTCAGCACCACATAGCGGTTTTTCCAAATCTCCCTaGAAATCCCTTTCCCGCAGAATTTCCGGACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSAPHSGFSKSP*KSLSRRISGPS Trigger: GCTGGGTCCGGAAATTCTGCGGGAAAGGGATTTTCAGGGAGATTTGGAAAAACCGCTATGTGGTGCTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015889.10 ENSMUST00000123006.8 ENSMUST00000130043.8 ENSMUST00000143485.2 |
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