Pregenerated sensors for PLEKHN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078485Ensembl transcript IDs: ENSMUST00000105571.4, ENSMUST00000217885.2, ENSMUST00000218699.2
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CAA 90 bp | GGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAAGTCTaGTTCCAGATAGGAGCCTCTTCATCTAGCAGGGATGTCAGAGAC | + |
Preference number: 2 (lower is better) Translates to: GFLGCGHFGWEGEEV*FQIGASSSSRDVRD Trigger: GTCTCTGACATCCCTGCTAGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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3UTR-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTGTGGCCACTTCGGGTaGGAGGGAGAGGAAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQCGHFG*EGEEVL Trigger: CAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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3UTR-3UTR CAA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGTGGCTGGTTGTGTTGTaGAGAAGCAGCGGCCCCCTT | + |
Preference number: 3 (lower is better) Translates to: PPPLQASWAVATSGGRERWLVVL*RSSGPL Trigger: AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCA...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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3UTR TCA 72 bp | AGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTaGGAAGCAGCGGCCCCCTTGGGGGCCATCAGATCC | + |
Preference number: 3 (lower is better) Translates to: SLMQGGAGWLCC*EAAAPLGAIRS Trigger: GGATCTGATGGCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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3UTR CCA 72 bp | TCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTaGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCC | + |
Preference number: 3 (lower is better) Translates to: STAGFLGCGHFG*EGEEVLFQIGA Trigger: GGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAGGCCCGTAGCCTCCTaGGGGCCTGAGGGACGCAGT | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGRERRPVAS*GPEGRS Trigger: ACTGCGTCCCTCAGGCCCCCAGGAGGCTACGGGCCT...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCGGGCCAGGTGGCAGGTaGGCCCCATCCCTGCGAGAG | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGGPGGR*APSLRE Trigger: CTCTCGCAGGGATGGGGCCCACCTGCCACCTGGCCC...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGGGCCAGGTGGCAGGTaGGCCCCATCCCTGCGAGAG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGGPGGR*APSLRE Trigger: CTCTCGCAGGGATGGGGCCCACCTGCCACCTGGCCC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 69% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGAGGCCCGTAGCCTCCTaGGGGCCTGAGGGACGCAGT | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGRPVAS*GPEGRS Trigger: ACTGCGTCCCTCAGGCCCCCAGGAGGCTACGGGCCT...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCACTCTCTGGGCCAGGTaGCAGGTGGGCCCCATCCCT | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGTLWAR*QVGPIP Trigger: AGGGATGGGGCCCACCTGCCACCTGGCCCAGAGAGT...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCGGTCCCACTGTTCCTaGGAGGGCAGATGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGRSHCS*EGRCCS Trigger: GCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACCG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGACTCTCTGGGCCAGGTaGCAGGTGGGCCCCATCCCT | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGTLWAR*QVGPIP Trigger: AGGGATGGGGCCCACCTGCCACCTGGCCCAGAGAGT...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGCAGGGAGGGACTGGCTaGTGGGGAACACTGGACACT | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGRERQGGTG*WGTLDT Trigger: AGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCCCTG...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGGAACCCCGGTGTCTCTaGGAAGCTCTGGGTTGCAGG | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGREREPRCL*EALGCR Trigger: CCTGCAACCCAGAGCTTCCCAGAGACACCGGGGTTC...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGAGCCTCCTGGGGGCCTaGGGGACGCAGTGGCTGTTC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWSLLGA*GTQWLF Trigger: GAACAGCCACTGCGTCCCTCAGGCCCCCAGGAGGCT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTAGAGCCAGTGGCTaGGCTCGGCCTCACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGGRASG*ARPHCG Trigger: GCCACAGTGAGGCCGAGCTCAGCCACTGGCTCTACC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTGCGAGAGACAGTCCTaGGGCACAGCAGCCATTGGC | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGCERQS*GTAAIG Trigger: GCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGAAGCTGAGGGAAGTCTaGGGGCTGTGGGCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGKLREV*GLWASA Trigger: AGCAGAGGCCCACAGCCCTCAGACTTCCCTCAGCTT...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCTGATGTCCTGGCTGTaGTGGAATCGCAGCCGAACC | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGLMSWL*WNRSRT Trigger: GGTTCGGCTGCGATTCCAGCACAGCCAGGACATCAG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTGGGAGGGCAGATGCTaGAGCTTGACCCTTGAGGCA | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGWEGRC*SLTLEA Trigger: TGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCA...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCCAGGTGGCAGGTaGGCCCCATCCCTGCGAGAG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLGPGGR*APSLRE Trigger: CTCTCGCAGGGATGGGGCCCACCTGCCACCTGGCCC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTCCAGGTTTTCTGGGTaGTGTTCTGGGCCCGGGATG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGSRFSG*CSGPGM Trigger: CATCCCGGGCCCAGAACATCACCCAGAAAACCTGGA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGTAGAGCCAGTGGCTaGGCTCGGCCTCACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWGRASG*ARPHCG Trigger: GCCACAGTGAGGCCGAGCTCAGCCACTGGCTCTACC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCCAGATACTTCTCTTTaGGCTCTGCCCCTGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGPDTSL*ALPLGD Trigger: GTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGGGCACCTTTCTTGGTaGGTAAGTGGGAGCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGGHLSW*VSGSPE Trigger: CTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTCAGGCACCAGCCTTTaGGAAGTAGCACCCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGSGTSL*EVAPPS Trigger: GGAAGGGGGTGCTACTTCTCAAAGGCTGGTGCCTGA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTGATGTCCTGGCTGTaGTGGAATCGCAGCCGAACC | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGLMSWL*WNRSRT Trigger: GGTTCGGCTGCGATTCCAGCACAGCCAGGACATCAG...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAGGCCCGTAGCCTCCTaGGGGCCTGAGGGACGCAGT | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLRPVAS*GPEGRS Trigger: ACTGCGTCCCTCAGGCCCCCAGGAGGCTACGGGCCT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGACTCTCTGGGCCAGGTaGCAGGTGGGCCCCATCCCT | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWTLWAR*QVGPIP Trigger: AGGGATGGGGCCCACCTGCCACCTGGCCCAGAGAGT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGGAGGGACTGGCTGGTaGGGAACACTGGACACTCTA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGGGTGW*GTLDTL Trigger: TAGAGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTCAGTGCACTCATCTTaGTCAGGTCCAGGGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGSVHSS*SGPGAG Trigger: CCCTGCCCCTGGACCTGACCAAGATGAGTGCACTGA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCGTCTCTGGGAAGCTCTaGGTTGCAGGGCACCTTTCT | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGVSGKL*VAGHLS Trigger: AGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGAC...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGTGCGAGAGACAGTCCTaGGGCACAGCAGCCATTGGC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGCERQS*GTAAIG Trigger: GCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCA...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGTGGGCCTCTGCTCTTaGAGGAACCCCGGTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGVGLCS*RNPGVS Trigger: AGAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCAC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCAGGCGAGCTGGAGATaGCAGAGCTGGATTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGQASWR*QSWIQR Trigger: TCTCTGAATCCAGCTCTGGCATCTCCAGCTCGCCTG...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTGGGAAGCTCTGGGTTaGAGGGCACCTTTCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGWEALG*RAPFLV Trigger: CACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGTTCTGGGTGATGTTCTaGGCCCGGGATGTCCGTCCC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGFWVMF*ARDVRP Trigger: GGGACGGACATCCCGGGCCCAGAACATCACCCAGAA...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGATGTCCTGGCTGTGCTaGAATCGCAGCCGAACCTTG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGMSWLC*NRSRTL Trigger: CAAGGTTCGGCTGCGATTCCAGCACAGCCAGGACAT...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGGCCTGGAAGTACAGGTaGGAAGGGAACAGTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGRERAWKYR*EGNSSR Trigger: TCTAGAACTGTTCCCTTCCCACCTGTACTTCCAGGC...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTCCCAGAGACCCCTGTaGGGGTGCCGAGTGGCATCG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLSQRPL*GCRVAS Trigger: CGATGCCACTCGGCACCCCCACAGGGGTCTCTGGGA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCGGTCCCACTGTTCCTaGGAGGGCAGATGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWRSHCS*EGRCCS Trigger: GCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACCG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGGTTCCTCAGAGAAGATaGCCAGGGATGCTGGGTATA | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGRERVPQRR*PGMLGI Trigger: TATACCCAGCATCCCTGGCCATCTTCTCTGAGGAAC...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCAGGGAGGGACTGGCTaGTGGGGAACACTGGACACT | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGQGGTG*WGTLDT Trigger: AGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCCCTG...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGTCTCTGGGAAGCTCTaGGTTGCAGGGCACCTTTCT | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGVSGKL*VAGHLS Trigger: AGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGAC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
||
CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGAGGGGGCAGGGAACTaGGTTTGCCTTCTCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGEGAGN*VCLLWQ Trigger: CTGCCAGAGAAGGCAAACCCAGTTCCCTGCCCCCTC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS-3UTR TCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCTTCTCTGTTTCCCTTaGGCGAGGGCTTTCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGLLCFP*ARAFWK Trigger: TTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGCAGAGAACAAGGAGTaGGGCAGGCAGCGGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLAENKE*GRQRAC Trigger: ACAGGCCCGCTGCCTGCCCCACTCCTTGTTCTCTGC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CCCCCTCCACTGCAGGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAAAGCTAAGGCCTTCTaGTTCCTCAGAGAAGATGGC | + |
Preference number: 4 (lower is better) Translates to: PPPLQASWAVATSGGRERKAKAF*FLREDG Trigger: GCCATCTTCTCTGAGGAACCAGAAGGCCTTAGCTTT...CCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCAGGGAGGGACTGGCTaGTGGGGAACACTGGACACT | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWQGGTG*WGTLDT Trigger: AGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCCCTG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGTTCTTGGTGAGTAAGTaGGAGCCCAGAGGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGFLVSK*EPRGPG Trigger: GCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAA...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGAACCCCGGTGTCTCTaGGAAGCTCTGGGTTGCAGG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWEPRCL*EALGCR Trigger: CCTGCAACCCAGAGCTTCCCAGAGACACCGGGGTTC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCCACTGCAGGCTTCCTaGGCTGTGGCCACTTCGGGT | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLPLQAS*AVATSG Trigger: ACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
||
CDS-3UTR TCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGAGCCTCCTGGGGGCCTaGGGGACGCAGTGGCTGTTC | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSLLGA*GTQWLF Trigger: GAACAGCCACTGCGTCCCTCAGGCCCCCAGGAGGCT...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTTCTCTGTTTCCCTTaGGCGAGGGCTTTCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGLLCFP*ARAFWK Trigger: TTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAG...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGCAGATGCTGCAGCTTaGCCCTTGAGGCACAGATTG | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGADAAA*PLRHRL Trigger: CAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCCAGATACTTCTCTTTaGGCTCTGCCCCTGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGPDTSL*ALPLGD Trigger: GTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGG...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCACCTTTCTTGGTaGGTAAGTGGGAGCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWGHLSW*VSGSPE Trigger: CTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAAGCTGAGGGAAGTCTaGGGGCTGTGGGCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLKLREV*GLWASA Trigger: AGCAGAGGCCCACAGCCCTCAGACTTCCCTCAGCTT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCTGATGTCCTGGCTGTaGTGGAATCGCAGCCGAACC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWLMSWL*WNRSRT Trigger: GGTTCGGCTGCGATTCCAGCACAGCCAGGACATCAG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTTCTGGGTGATGTTCTaGGCCCGGGATGTCCGTCCC | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLFWVMF*ARDVRP Trigger: GGGACGGACATCCCGGGCCCAGAACATCACCCAGAA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGATGTCCTGGCTGTGCTaGAATCGCAGCCGAACCTTG | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGMSWLC*NRSRTL Trigger: CAAGGTTCGGCTGCGATTCCAGCACAGCCAGGACAT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGCCTGGAAGTACAGGTaGGAAGGGAACAGTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGAWKYR*EGNSSR Trigger: TCTAGAACTGTTCCCTTCCCACCTGTACTTCCAGGC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGTTCCTCAGAGAAGATaGCCAGGGATGCTGGGTATA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGVPQRR*PGMLGI Trigger: TATACCCAGCATCCCTGGCCATCTTCTCTGAGGAAC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTACCTACAAGCTGTGTaGGCTTCTGTAATCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGYLQAV*ASVILG Trigger: TCCCAGGATTACAGAAGCCCACACAGCTTGTAGGTA...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGTTTGAGCTCTGCCCCTaGGAGACGGGCTACTGTCAC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWFELCP*ETGYCH Trigger: GTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAA...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGTCAGTGCACTCATCTTaGTCAGGTCCAGGGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWSVHSS*SGPGAG Trigger: CCCTGCCCCTGGACCTGACCAAGATGAGTGCACTGA...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGTTCTTGGTGAGTAAGTaGGAGCCCAGAGGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWFLVSK*EPRGPG Trigger: GCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAA...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGTCTCTGGGAAGCTCTaGGTTGCAGGGCACCTTTCT | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGVSGKL*VAGHLS Trigger: AGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGAC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGAGGGGGCAGGGAACTaGGTTTGCCTTCTCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLEGAGN*VCLLWQ Trigger: CTGCCAGAGAAGGCAAACCCAGTTCCCTGCCCCCTC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGTGTGGCCACTTCGGGTaGGAGGGAGAGGAAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWCGHFG*EGEEVL Trigger: CAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACA...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS-3UTR TCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCACCTTTCTTGGTaGGTAAGTGGGAGCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLGHLSW*VSGSPE Trigger: CTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTGGGAGGGCAGATGCTaGAGCTTGACCCTTGAGGCA | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLWEGRC*SLTLEA Trigger: TGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCACTCTAATTTCCAGCTaGTCCGTCCATTGGAAGAGA | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGTLISS*SVHWKR Trigger: TCTCTTCCAATGGACGGAGCAGCTGGAAATTAGAGT...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCAGGCGAGCTGGAGATaGCAGAGCTGGATTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWQASWR*QSWIQR Trigger: TCTCTGAATCCAGCTCTGGCATCTCCAGCTCGCCTG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGTGGGAAGCTCTGGGTTaGAGGGCACCTTTCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWWEALG*RAPFLV Trigger: CACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCA...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCATCAGATCTGTTCCAGGTTTTCTaGGTGATGTTCTGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: VLAGCVVEKQRPPWGPSDLFQVF*VMFWAR Trigger: CCGGGCCCAGAACATCACCCAGAAAACCTGGAACAG...ATCTGATGGCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCGAATACACTCAGGAATaGCTGTTCCAGGTTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGEYTQE*LFQVFW Trigger: CCAGAAAACCTGGAACAGCCATTCCTGAGTGTATTC...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGATGTCCTGGCTGTGCTaGAATCGCAGCCGAACCTTG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWMSWLC*NRSRTL Trigger: CAAGGTTCGGCTGCGATTCCAGCACAGCCAGGACAT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTCCCAGAGACCCCTGTaGGGGTGCCGAGTGGCATCG | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSQRPL*GCRVAS Trigger: CGATGCCACTCGGCACCCCCACAGGGGTCTCTGGGA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGAGATTGCGCCGCTCATaGAACCACACCCATATGCTC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGRLRRS*NHTHML Trigger: GAGCATATGGGTGTGGTTCCATGAGCGGCGCAATCT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTATAATCCTCATAACTaGCACATACCACGCGGATGG | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGYNPHN*HIPRGW Trigger: CCATCCGCGTGGTATGTGCCAGTTATGAGGATTATA...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTACCTACAAGCTGTGTaGGCTTCTGTAATCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGYLQAV*ASVILG Trigger: TCCCAGGATTACAGAAGCCCACACAGCTTGTAGGTA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGAGGGACTGGCTGGTaGGGAACACTGGACACTCTA | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLGGTGW*GTLDTL Trigger: TAGAGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCATGTCTGTAATCTTGTaGCGAGATGTAGCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGMSVIL*RDVAGG Trigger: ACCACCAGCTACATCTCGCCACAAGATTACAGACAT...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTTCTTGGTGAGTAAGTaGGAGCCCAGAGGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLFLVSK*EPRGPG Trigger: GCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
||
CDS-3UTR TCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCTAGATAGCAGTCACTaGTGTCCTGGCTGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWLDSSH*CPGCAG Trigger: TCCAGCACAGCCAGGACATCAGTGACTGCTATCTAG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCCTTCTCTTCTAAGTTaGTATGGATGGCACTTAGTG | + |
Preference number: 4 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGPSLLS*YGWHLV Trigger: CACTAAGTGCCATCCATATCAACTTAGAAGAGAAGG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCCAGATACTTCTCTTTaGGCTCTGCCCCTGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLPDTSL*ALPLGD Trigger: GTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGATCGCACAGAGGAACTaGTCATCCAGGCCTTGGATG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWIAQRN*SSRPWM Trigger: CATCCAAGGCCTGGATGAGCAGTTCCTCTGTGCGAT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCTGTTCCAGGTTTTCTaGGTGATGTTCTGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLLFQVF*VMFWAR Trigger: CCGGGCCCAGAACATCACCCAGAAAACCTGGAACAG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAGTCCCTCAGAACCATaGGCCTGGAAGTACAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLSPSEP*AWKYRW Trigger: CCACCTGTACTTCCAGGCCCATGGTTCTGAGGGACT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGCAGAGAACAAGGAGTaGGGCAGGCAGCGGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQAENKE*GRQRAC Trigger: ACAGGCCCGCTGCCTGCCCCACTCCTTGTTCTCTGC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTGCAGAGAACAAGGAGTaGGGCAGGCAGCGGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: HFGWEGEEVLFQIGASSSAENKE*GRQRAC Trigger: ACAGGCCCGCTGCCTGCCCCACTCCTTGTTCTCTGC...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGTATAATCCTCATAACTaGCACATACCACGCGGATGG | + |
Preference number: 4 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGYNPHN*HIPRGW Trigger: CCATCCGCGTGGTATGTGCCAGTTATGAGGATTATA...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGACGGGCTACTGTCACTaGGCTTCATCTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGTGYCH*ASSSFG Trigger: GCCAAAAGAAGATGAAGCCCAGTGACAGTAGCCCGT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCCACTGCAGGCTTCCTaGGCTGTGGCCACTTCGGGT | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQPLQAS*AVATSG Trigger: ACCCGAAGTGGCCACAGCCCAGGAAGCCTGCAGTGG...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS-3UTR TCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCTAGATAGCAGTCACTaGTGTCCTGGCTGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLLDSSH*CPGCAG Trigger: TCCAGCACAGCCAGGACATCAGTGACTGCTATCTAG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTGCGAGAGACAGTCCTaGGGCACAGCAGCCATTGGC | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQCERQS*GTAAIG Trigger: GCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGTGGGCCTCTGCTCTTaGAGGAACCCCGGTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQVGLCS*RNPGVS Trigger: AGAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCAC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGAGTGGGAGCAGTCCCTaGAATGTAAGTCCCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWSGSSP*NVSPSE Trigger: TTCTGAGGGACTTACATTCCAGGGACTGCTCCCACT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAGATTGCGCCGCTCATaGAACCACACCCATATGCTC | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLRLRRS*NHTHML Trigger: GAGCATATGGGTGTGGTTCCATGAGCGGCGCAATCT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGACGGGCTACTGTCACTaGGCTTCATCTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWTGYCH*ASSSFG Trigger: GCCAAAAGAAGATGAAGCCCAGTGACAGTAGCCCGT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTGGAGATGCCAGAGCTaGATTCAGAGACAGGCACAG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLWRCQS*IQRQAQ Trigger: CTGTGCCTGTCTCTGAATCCAGCTCTGGCATCTCCA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGAACCCCGGTGTCTCTaGGAAGCTCTGGGTTGCAGG | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQEPRCL*EALGCR Trigger: CCTGCAACCCAGAGCTTCCCAGAGACACCGGGGTTC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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3UTR CAA 72 bp | GGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAAGTCTaGTTCCAGATAGGAGCCTCTTCATCTAGCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: GCGHFGWEGEEV*FQIGASSSSRD Trigger: ATCCCTGCTAGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR GCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGACTCTAATTTCCAGCTaGTCCGTCCATTGGAAGAGA | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGTLISS*SVHWKR Trigger: TCTCTTCCAATGGACGGAGCAGCTGGAAATTAGAGT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGAATACACTCAGGAATaGCTGTTCCAGGTTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGEYTQE*LFQVFW Trigger: CCAGAAAACCTGGAACAGCCATTCCTGAGTGTATTC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAGTGGGAGCAGTCCCTaGAATGTAAGTCCCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLSGSSP*NVSPSE Trigger: TTCTGAGGGACTTACATTCCAGGGACTGCTCCCACT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCATCAGATTACCTACAAGCTGTGTaGGCTTCTGTAATCCTGGGA | + |
Preference number: 4 (lower is better) Translates to: VLAGCVVEKQRPPWGPSDYLQAV*ASVILG Trigger: TCCCAGGATTACAGAAGCCCACACAGCTTGTAGGTA...ATCTGATGGCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTTTGAGCTCTGCCCCTaGGAGACGGGCTACTGTCAC | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQFELCP*ETGYCH Trigger: GTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTTTTGAGCTCTGCCCCTaGGAGACGGGCTACTGTCAC | + |
Preference number: 4 (lower is better) Translates to: HFGWEGEEVLFQIGASSSFELCP*ETGYCH Trigger: GTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAA...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTCAGTGCACTCATCTTaGTCAGGTCCAGGGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSVHSS*SGPGAG Trigger: CCCTGCCCCTGGACCTGACCAAGATGAGTGCACTGA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGATGTCTGTAATCTTGTaGCGAGATGTAGCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGMSVIL*RDVAGG Trigger: ACCACCAGCTACATCTCGCCACAAGATTACAGACAT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGCAGATGCTGCAGCTTaGCCCTTGAGGCACAGATTG | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQADAAA*PLRHRL Trigger: CAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCCTTCTCTTCTAAGTTaGTATGGATGGCACTTAGTG | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGPSLLS*YGWHLV Trigger: CACTAAGTGCCATCCATATCAACTTAGAAGAGAAGG...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGAGTCCCTCAGAACCATaGGCCTGGAAGTACAGGTGG | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSPSEP*AWKYRW Trigger: CCACCTGTACTTCCAGGCCCATGGTTCTGAGGGACT...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTAGTCCCTCAGAACCATaGGCCTGGAAGTACAGGTGG | + |
Preference number: 4 (lower is better) Translates to: HFGWEGEEVLFQIGASSSSPSEP*AWKYRW Trigger: CCACCTGTACTTCCAGGCCCATGGTTCTGAGGGACT...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTAAAGCTAAGGCCTTCTaGTTCCTCAGAGAAGATGGC | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLKAKAF*FLREDG Trigger: GCCATCTTCTCTGAGGAACCAGAAGGCCTTAGCTTT...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | GTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCATCAGATTATAATCCTCATAACTaGCACATACCACGCGGATGG | + |
Preference number: 4 (lower is better) Translates to: VLAGCVVEKQRPPWGPSDYNPHN*HIPRGW Trigger: CCATCCGCGTGGTATGTGCCAGTTATGAGGATTATA...ATCTGATGGCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTTGCTCATCCAGGCCTTaGATGTCTGTAATCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLCSSRP*MSVILW Trigger: CCACAAGATTACAGACATCCAAGGCCTGGATGAGCA...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS-3UTR CCA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGAACTCATCCAGGCCTTaGATGTCTGTAATCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWNSSRP*MSVILW Trigger: CCACAAGATTACAGACATCCAAGGCCTGGATGAGTT...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTCTAGATAGCAGTCACTaGTGTCCTGGCTGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: HFGWEGEEVLFQIGASSSLDSSH*CPGCAG Trigger: TCCAGCACAGCCAGGACATCAGTGACTGCTATCTAG...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGAATACACTCAGGAATaGCTGTTCCAGGTTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLEYTQE*LFQVFW Trigger: CCAGAAAACCTGGAACAGCCATTCCTGAGTGTATTC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTAGATTGCGCCGCTCATaGAACCACACCCATATGCTC | + |
Preference number: 4 (lower is better) Translates to: HFGWEGEEVLFQIGASSSRLRRS*NHTHML Trigger: GAGCATATGGGTGTGGTTCCATGAGCGGCGCAATCT...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGTCTTCTAAGTTGATATaGATGGCACTTAGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGSSKLI*MALSGS Trigger: GCTTCCACTAAGTGCCATCCATATCAACTTAGAAGA...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR TCA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCCTTCTCTTCTAAGTTaGTATGGATGGCACTTAGTG | + |
Preference number: 4 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLPSLLS*YGWHLV Trigger: CACTAAGTGCCATCCATATCAACTTAGAAGAGAAGG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGCCTGGAAGTACAGGTaGGAAGGGAACAGTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQAWKYR*EGNSSR Trigger: TCTAGAACTGTTCCCTTCCCACCTGTACTTCCAGGC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGAGTGGGAGCAGTCCCTaGAATGTAAGTCCCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSGSSP*NVSPSE Trigger: TTCTGAGGGACTTACATTCCAGGGACTGCTCCCACT...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGACGGGCTACTGTCACTaGGCTTCATCTTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQTGYCH*ASSSFG Trigger: GCCAAAAGAAGATGAAGCCCAGTGACAGTAGCCCGT...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGATGTCTGTAATCTTGTaGCGAGATGTAGCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQMSVIL*RDVAGG Trigger: ACCACCAGCTACATCTCGCCACAAGATTACAGACAT...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CCA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTCTTCTAAGTTGATATaGATGGCACTTAGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQSSKLI*MALSGS Trigger: GCTTCCACTAAGTGCCATCCATATCAACTTAGAAGA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTGTGGGCCTCTGCTCTaGAAGGAACCCCGGTGTCTC | + |
Preference number: 5 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGCGPLL*KEPRCL Trigger: GAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCACA...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCTGGGAAGCTCTGGGTaGCAGGGCACCTTTCTTGGT | + |
Preference number: 5 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGLGSSG*QGTFLG Trigger: ACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAG...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 90 bp | CCCGGTGTCTCTGGGAAGCTCTGGGTTGCAGGGCACCTTTCTTGGTaGGTAAGTGGGAGCCCAGAGGCCCAGGCGAGCTGGAGATGCCAG | + |
Preference number: 5 (lower is better) Translates to: PGVSGKLWVAGHLSW*VSGSPEAQASWRCQ Trigger: CTGGCATCTCCAGCTCGCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGACACCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGACCACGCGGATGGTGTaGATGAGGTGGCCTTCGATG | + |
Preference number: 5 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGTTRMV*MRWPSM Trigger: CATCGAAGGCCACCTCATCAACACCATCCGCGTGGT...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGCCAGATACTTCTCTTaGAGCTCTGCCCCTGGGAGA | + |
Preference number: 5 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGARYFS*SSAPGR Trigger: TCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGCAGGGAACTGGGTTaGCCTTCTCTGGCAGGGGTG | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWGRELG*PSLAGV Trigger: CACCCCTGCCAGAGAAGGCAAACCCAGTTCCCTGCC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS TCA 90 bp | CCAGAAGCCGGTCCCACTGTTCCTGGGAGGGCAGATGCTGCAGCTTaGCCCTTGAGGCACAGATTGCGCCGCTCATGGAACCACACCCAT | + |
Preference number: 5 (lower is better) Translates to: PEAGPTVPGRADAAA*PLRHRLRRSWNHTH Trigger: ATGGGTGTGGTTCCATGAGCGGCGCAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACCGGCTTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 90 bp | CTCTGGGAAGCTCTGGGTTGCAGGGCACCTTTCTTGGTGAGTAAGTaGGAGCCCAGAGGCCCAGGCGAGCTGGAGATGCCAGAGCTGGAT | + |
Preference number: 5 (lower is better) Translates to: LWEALGCRAPFLVSK*EPRGPGELEMPELD Trigger: ATCCAGCTCTGGCATCTCCAGCTCGCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCACCCAAGAGAGCCATTaGCTTTTCCAGGTGGTAGAG | + |
Preference number: 5 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGTQESH*LFQVVE Trigger: CTCTACCACCTGGAAAAGCAAATGGCTCTCTTGGGT...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGACCACGCGGATGGTGTaGATGAGGTGGCCTTCGATG | + |
Preference number: 5 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGTTRMV*MRWPSM Trigger: CATCGAAGGCCACCTCATCAACACCATCCGCGTGGT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGGGGCAGTGGGACAGTaGAGCCAGATACTTCTCTTT | + |
Preference number: 5 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGGAVGQ*SQILLF Trigger: AAAGAGAAGTATCTGGCTCAACTGTCCCACTGCCCC...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 61% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 90 bp | CAAACAAGCCAGCCAGCTTCCTGGCGCTGTCTTCTCTGTTTCCCTTaGGCGAGGGCTTTCTGGAAAAGGAGGCCCGTAGCCTCCTGGGGG | + |
Preference number: 5 (lower is better) Translates to: QTSQPASWRCLLCFP*ARAFWKRRPVASWG Trigger: CCCCCAGGAGGCTACGGGCCTCCTTTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAGACAGCGCCAGGAAGCTGGCTGGCTTGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 90 bp | CCTCTGCTCTTGAAGGAACCCCGGTGTCTCTGGGAAGCTCTGGGTTaGAGGGCACCTTTCTTGGTGAGTAAGTGGGAGCCCAGAGGCCCA | + |
Preference number: 5 (lower is better) Translates to: PLLLKEPRCLWEALG*RAPFLVSKWEPRGP Trigger: TGGGCCTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGACACCGGGGTTCCTTCAAGAGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTCCGCCACCCTTTTTaGAATACACTCAGGAATGGC | + |
Preference number: 5 (lower is better) Translates to: CRAVLAGCVVEKQRPPWGLRHPF*NTLRNG Trigger: GCCATTCCTGAGTGTATTCAAAAAAGGGTGGCGGAG...CCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCTGGGAAGCTCTGGGTaGCAGGGCACCTTTCTTGGT | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWLGSSG*QGTFLG Trigger: ACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 90 bp | CTGGGCCAGGTGGCAGGTGGGCCCCATCCCTGCGAGAGACAGTCCTaGGGCACAGCAGCCATTGGCTATAATCCTCATAACTGGCACATA | + |
Preference number: 5 (lower is better) Translates to: LGQVAGGPHPCERQS*GTAAIGYNPHNWHI Trigger: TATGTGCCAGTTATGAGGATTATAGCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCAGGGATGGGGCCCACCTGCCACCTGGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 90 bp | GCAGGGAAGCCTATAGTGGTTGGCACCGAGGACTCAGGGAGGGACTaGCTGGTGGGGAACACTGGACACTCTAATTTCCAGCTGCTCCGT | + |
Preference number: 5 (lower is better) Translates to: AGKPIVVGTEDSGRD*LVGNTGHSNFQLLR Trigger: ACGGAGCAGCTGGAAATTAGAGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCCCTGAGTCCTCGGTGCCAACCACTATAGGCTTCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCCAGATACTTCTCTTaGAGCTCTGCCCCTGGGAGA | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWARYFS*SSAPGR Trigger: TCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGGGCAGTGGGACAGTaGAGCCAGATACTTCTCTTT | + |
Preference number: 5 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGGAVGQ*SQILLF Trigger: AAAGAGAAGTATCTGGCTCAACTGTCCCACTGCCCC...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGACCCAAGAGAGCCATTaGCTTTTCCAGGTGGTAGAG | + |
Preference number: 5 (lower is better) Translates to: YAGRCWLVVLLRSSGPLGTQESH*LFQVVE Trigger: CTCTACCACCTGGAAAAGCAAATGGCTCTCTTGGGT...CCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGGCAGGGAACTGGGTTaGCCTTCTCTGGCAGGGGTG | + |
Preference number: 5 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQGRELG*PSLAGV Trigger: CACCCCTGCCAGAGAAGGCAAACCCAGTTCCCTGCC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGCTCCGCCACCCTTTTTaGAATACACTCAGGAATGGC | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWLRHPF*NTLRNG Trigger: GCCATTCCTGAGTGTATTCAAAAAAGGGTGGCGGAG...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | GCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTCCTTCTCTTCTAAGTaGATATGGATGGCACTTAGT | + |
Preference number: 5 (lower is better) Translates to: AGRCWLVVLLRSSGPLGGSFSSK*IWMALS Trigger: ACTAAGTGCCATCCATATCAACTTAGAAGAGAAGGA...GCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCTTCATCTTCTTTaGGCCAGTGCTGACACAGTT | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWGLHLL*ASADTV Trigger: AACTGTGTCAGCACTGGCCAAAAGAAGATGAAGCCC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGTGTGGGCCTCTGCTCTaGAAGGAACCCCGGTGTCTC | + |
Preference number: 5 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQCGPLL*KEPRCL Trigger: GAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCACA...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTTGTGGGCCTCTGCTCTaGAAGGAACCCCGGTGTCTC | + |
Preference number: 5 (lower is better) Translates to: HFGWEGEEVLFQIGASSSCGPLL*KEPRCL Trigger: GAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCACA...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS GCA 90 bp | GGAGGGACTGGCTGGTGGGGAACACTGGACACTCTAATTTCCAGCTaGTCCGTCCATTGGAAGAGAGTGAACCTCGGCCTCTACCTACAA | + |
Preference number: 5 (lower is better) Translates to: GGTGWWGTLDTLISS*SVHWKRVNLGLYLQ Trigger: TTGTAGGTAGAGGCCGAGGTTCACTCTCTTCCAATGGACGGAGCAGCTGGAAATTAGAGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 90 bp | GCAGGGGCAGTGGGACAGTTGAGCCAGATACTTCTCTTTGAGCTCTaGCCCTGGGAGACGGGCTACTGTCACTGGGCTTCATCTTCTTTT | + |
Preference number: 5 (lower is better) Translates to: AGAVGQLSQILLFEL*PWETGYCHWASSSF Trigger: AAAAGAAGATGAAGCCCAGTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGCTCAACTGTCCCACTGCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 90 bp | CCATCAGTCGGGCAGATGTTCAATTCCGTCAGTGGGAGCAGTCCCTaGAATGTAAGTCCCTCAGAACCATGGGCCTGGAAGTACAGGTGG | + |
Preference number: 5 (lower is better) Translates to: PSVGQMFNSVSGSSP*NVSPSEPWAWKYRW Trigger: CCACCTGTACTTCCAGGCCCATGGTTCTGAGGGACTTACATTCCAGGGACTGCTCCCACTGACGGAATTGAACATCTGCCCGACTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 90 bp | CTGCCCCTGGGAGACGGGCTACTGTCACTGGGCTTCATCTTCTTTTaGCCAGTGCTGACACAGTTAGAGTCGGTCTGGTTAGGTACAGGA | + |
Preference number: 5 (lower is better) Translates to: LPLGDGLLSLGFIFF*PVLTQLESVWLGTG Trigger: TCCTGTACCTAACCAGACCGACTCTAACTGTGTCAGCACTGGCCAAAAGAAGATGAAGCCCAGTGACAGTAGCCCGTCTCCCAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | GTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGGGCCATCAGATGAGGCACAGCAGCCATaGGCTATAATCCTCATAACT | + |
Preference number: 5 (lower is better) Translates to: VLAGCVVEKQRPPWGPSDEAQQP*AIILIT Trigger: AGTTATGAGGATTATAGCCAATGGCTGCTGTGCCTC...ATCTGATGGCCCCCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGCTTCATCTTCTTTaGGCCAGTGCTGACACAGTT | + |
Preference number: 5 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLGLHLL*ASADTV Trigger: AACTGTGTCAGCACTGGCCAAAAGAAGATGAAGCCC...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTCTGCTCATCCAGGCCTaGGATGTCTGTAATCTTGTG | + |
Preference number: 5 (lower is better) Translates to: SYAGRCWLVVLLRSSGPLLLIQA*DVCNLV Trigger: CACAAGATTACAGACATCCAAGGCCTGGATGAGCAG...AAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS-3UTR CAA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCTGGGAAGCTCTGGGTaGCAGGGCACCTTTCTTGGT | + |
Preference number: 5 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQLGSSG*QGTFLG Trigger: ACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAG...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | TTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGCGGCCCCCTTGGGAACTCATCCAGGCCTaGGATGTCTGTAATCTTGTG | + |
Preference number: 5 (lower is better) Translates to: LCRAVLAGCVVEKQRPPWELIQA*DVCNLV Trigger: CACAAGATTACAGACATCCAAGGCCTGGATGAGTTC...CCAAGGGGGCCGCTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 90 bp | GGCTTCATCTTCTTTTGGCCAGTGCTGACACAGTTAGAGTCGGTCTaGTTAGGTACAGGAGGGGCAGGGAAGCCTATAGTGGTTGGCACC | + |
Preference number: 5 (lower is better) Translates to: GFIFFWPVLTQLESV*LGTGGAGKPIVVGT Trigger: GGTGCCAACCACTATAGGCTTCCCTGCCCCTCCTGTACCTAACCAGACCGACTCTAACTGTGTCAGCACTGGCCAAAAGAAGATGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTGCCAGATACTTCTCTTaGAGCTCTGCCCCTGGGAGA | + |
Preference number: 5 (lower is better) Translates to: HFGWEGEEVLFQIGASSSARYFS*SSAPGR Trigger: TCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGC...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGGGCTTCATCTTCTTTaGGCCAGTGCTGACACAGTT | + |
Preference number: 5 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQGLHLL*ASADTV Trigger: AACTGTGTCAGCACTGGCCAAAAGAAGATGAAGCCC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 90 bp | CTTGATAGGTCAGGTCCAGGCGATGTCTGTATCGCACAGAGGAACTaGTCATCCAGGCCTTGGATGTCTGTAATCTTGTGGCGAGATGTA | + |
Preference number: 5 (lower is better) Translates to: LDRSGPGDVCIAQRN*SSRPWMSVILWRDV Trigger: TACATCTCGCCACAAGATTACAGACATCCAAGGCCTGGATGAGCAGTTCCTCTGTGCGATACAGACATCGCCTGGACCTGACCTATCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS-3UTR CAA 90 bp | AACTGCGTAGTCTTATGCAGGGCGGTGCTGGCTGGTTGTGTTGTTGAGAAGCAGGAGGCACAGCAGCCATaGGCTATAATCCTCATAACT | + |
Preference number: 5 (lower is better) Translates to: NCVVLCRAVLAGCVVEKQEAQQP*AIILIT Trigger: AGTTATGAGGATTATAGCCAATGGCTGCTGTGCCTC...CTGCTTCTCAACAACACAACCAGCCAGCACCGCCCTGCATAAGACTACGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS-3UTR CAA 90 bp | CACTTCGGGTGGGAGGGAGAGGAAGTCTTGTTCCAGATAGGAGCCTCTTCATCTGAACTCATCCAGGCCTaGGATGTCTGTAATCTTGTG | + |
Preference number: 5 (lower is better) Translates to: HFGWEGEEVLFQIGASSSELIQA*DVCNLV Trigger: CACAAGATTACAGACATCCAAGGCCTGGATGAGTTC...AGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218699.2 |
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CDS CCA 90 bp | ATGAGAAAGGAGCGAATCTCCTTTTCCTTCTCTTCTAAGTTGATATaGATGGCACTTAGTGGAAGCTCCCCCTTAAAGCTAAGGCCTTCT | + |
Preference number: 5 (lower is better) Translates to: MRKERISFSFSSKLI*MALSGSSPLKLRPS Trigger: AGAAGGCCTTAGCTTTAAGGGGGAGCTTCCACTAAGTGCCATCCATATCAACTTAGAAGAGAAGGAAAAGGAGATTCGCTCCTTTCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 90 bp | GAACCCCGGTGTCTCTGGGAAGCTCTGGGTTGCAGGGCACCTTTCTaGGTGAGTAAGTGGGAGCCCAGAGGCCCAGGCGAGCTGGAGATG | + |
Preference number: 6 (lower is better) Translates to: EPRCLWEALGCRAPF*VSKWEPRGPGELEM Trigger: CATCTCCAGCTCGCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGACACCGGGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 90 bp | GGCTTCCTGGGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAAGTCTaGTTCCAGATAGGAGCCTCTTCATCTGGGGGAGGGGGCAGGGAA | + |
Preference number: 6 (lower is better) Translates to: GFLGCGHFGWEGEEV*FQIGASSSGGGGRE Trigger: TTCCCTGCCCCCTCCCCCAGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACAGCCCAGGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS GCA 72 bp | AGAAGCCGGTCCCACTGTTCCTGGGAGGGCAGATGCTaGAGCTTGACCCTTGAGGCACAGATTGCGCCGCTC | + |
Preference number: 6 (lower is better) Translates to: RSRSHCSWEGRC*SLTLEAQIAPL Trigger: GAGCGGCGCAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACCGGCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | GCTGAGCTCGGCCTCACTGTGGCAGAGAACAAGGAGTaGGGCAGGCAGCGGGCCTGTAATCTGGAAGGCATG | + |
Preference number: 6 (lower is better) Translates to: AELGLTVAENKE*GRQRACNLEGM Trigger: CATGCCTTCCAGATTACAGGCCCGCTGCCTGCCCCACTCCTTGTTCTCTGCCACAGTGAGGCCGAGCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 72 bp | GGTCCCACTGTTCCTGGGAGGGCAGATGCTGCAGCTTaGCCCTTGAGGCACAGATTGCGCCGCTCATGGAAC | + |
Preference number: 6 (lower is better) Translates to: GPTVPGRADAAA*PLRHRLRRSWN Trigger: GTTCCATGAGCGGCGCAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | CGGTCCCACTGTTCCTGGGAGGGCAGATGCTGCAGCTaGACCCTTGAGGCACAGATTGCGCCGCTCATGGAA | + |
Preference number: 6 (lower is better) Translates to: RSHCSWEGRCCS*TLEAQIAPLME Trigger: TTCCATGAGCGGCGCAATCTGTGCCTCAAGGGTCAAGCTGCAGCATCTGCCCTCCCAGGAACAGTGGGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | GCCTCTGGGCCACTGTCTAGGTTCAGTGCACTCATCTaGGTCAGGTCCAGGGGCAGGGGCAGTGGGACAGTT | + |
Preference number: 6 (lower is better) Translates to: ASGPLSRFSALI*VRSRGRGSGTV Trigger: AACTGTCCCACTGCCCCTGCCCCTGGACCTGACCAAGATGAGTGCACTGAACCTAGACAGTGGCCCAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | TGTCTCTGGGAAGCTCTGGGTTGCAGGGCACCTTTCTaGGTGAGTAAGTGGGAGCCCAGAGGCCCAGGCGAG | + |
Preference number: 6 (lower is better) Translates to: CLWEALGCRAPF*VSKWEPRGPGE Trigger: CTCGCCTGGGCCTCTGGGCTCCCACTTACTCACCAAGAAAGGTGCCCTGCAACCCAGAGCTTCCCAGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | GGCTGTGGCCACTTCGGGTGGGAGGGAGAGGAAGTCTaGTTCCAGATAGGAGCCTCTTCATCTGGGGGAGGG | + |
Preference number: 6 (lower is better) Translates to: GCGHFGWEGEEV*FQIGASSSGGG Trigger: CCCTCCCCCAGATGAAGAGGCTCCTATCTGGAACAAGACTTCCTCTCCCTCCCACCCGAAGTGGCCACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS CAA 90 bp | CCAAACAAGCCAGCCAGCTTCCTGGCGCTGTCTTCTCTGTTTCCCTaGAGCGAGGGCTTTCTGGAAAAGGAGGCCCGTAGCCTCCTGGGG | + |
Preference number: 6 (lower is better) Translates to: PNKPASFLALSSLFP*SEGFLEKEARSLLG Trigger: CCCCAGGAGGCTACGGGCCTCCTTTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAGACAGCGCCAGGAAGCTGGCTGGCTTGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 72 bp | CAGCCAGCTTCCTGGCGCTGTCTTCTCTGTTTCCCTTaGGCGAGGGCTTTCTGGAAAAGGAGGCCCGTAGCC | + |
Preference number: 6 (lower is better) Translates to: QPASWRCLLCFP*ARAFWKRRPVA Trigger: GGCTACGGGCCTCCTTTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAGACAGCGCCAGGAAGCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 72 bp | GAACTGGGTTTGCCTTCTCTGGCAGGGGTGACAAGCTaGGGGAAGTCTGAGGGCTGTGGGCCTCTGCTCTTG | + |
Preference number: 6 (lower is better) Translates to: ELGLPSLAGVTS*GKSEGCGPLLL Trigger: CAAGAGCAGAGGCCCACAGCCCTCAGACTTCCCTCAGCTTGTCACCCCTGCCAGAGAAGGCAAACCCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 |
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CDS CCA 72 bp | AGAACAAGGAGTGGGGCAGGCAGCGGGCCTGTAATCTaGAAGGCATGTTCTCTGGACCCATCAGTCGGGCAG | + |
Preference number: 6 (lower is better) Translates to: RTRSGAGSGPVI*KACSLDPSVGQ Trigger: CTGCCCGACTGATGGGTCCAGAGAACATGCCTTCCAGATTACAGGCCCGCTGCCTGCCCCACTCCTTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | CCAGCCAGCTTCCTGGCGCTGTCTTCTCTGTTTCCCTaGAGCGAGGGCTTTCTGGAAAAGGAGGCCCGTAGC | + |
Preference number: 6 (lower is better) Translates to: PASFLALSSLFP*SEGFLEKEARS Trigger: GCTACGGGCCTCCTTTTCCAGAAAGCCCTCGCTCAAGGGAAACAGAGAAGACAGCGCCAGGAAGCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 90 bp | GTGGGCCCCATCCCTGCGAGAGACAGTCCTGAGGCACAGCAGCCATaGGCTATAATCCTCATAACTGGCACATACCACGCGGATGGTGTT | + |
Preference number: 6 (lower is better) Translates to: VGPIPARDSPEAQQP*AIILITGTYHADGV Trigger: AACACCATCCGCGTGGTATGTGCCAGTTATGAGGATTATAGCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCAGGGATGGGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 72 bp | GGAATCGCAGCCGAACCTTGGAGTAGTGAACAACCTTaGCTAGGTTCCTCACAGGTGTCCTCCGCCACCCTT | + |
Preference number: 6 (lower is better) Translates to: GIAAEPWSSEQP*LGSSQVSSATL Trigger: AAGGGTGGCGGAGGACACCTGTGAGGAACCTAGGCAAGGTTGTTCACTACTCCAAGGTTCGGCTGCGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 72 bp | GGCTGGTGGGGAACACTGGACACTCTAATTTCCAGCTaGTCCGTCCATTGGAAGAGAGTGAACCTCGGCCTC | + |
Preference number: 6 (lower is better) Translates to: GWWGTLDTLISS*SVHWKRVNLGL Trigger: GAGGCCGAGGTTCACTCTCTTCCAATGGACGGAGCAGCTGGAAATTAGAGTGTCCAGTGTTCCCCACCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS GCA 72 bp | GTGGGACAGTTGAGCCAGATACTTCTCTTTGAGCTCTaGCCCTGGGAGACGGGCTACTGTCACTGGGCTTCA | + |
Preference number: 6 (lower is better) Translates to: VGQLSQILLFEL*PWETGYCHWAS Trigger: TGAAGCCCAGTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGCTCAACTGTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | CCTATAGTGGTTGGCACCGAGGACTCAGGGAGGGACTaGCTGGTGGGGAACACTGGACACTCTAATTTCCAG | + |
Preference number: 6 (lower is better) Translates to: PIVVGTEDSGRD*LVGNTGHSNFQ Trigger: CTGGAAATTAGAGTGTCCAGTGTTCCCCACCAGCCAGTCCCTCCCTGAGTCCTCGGTGCCAACCACTATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | TGGTGGTGTGTAGGGATCAGCATAGAGCGGGGAGTGTaGAATGTCCAAAGAGTGATCCTGAGCCTCTGGGCC | + |
Preference number: 6 (lower is better) Translates to: WWCVGISIERGV*NVQRVILSLWA Trigger: GGCCCAGAGGCTCAGGATCACTCTTTGGACATTCCACACTCCCCGCTCTATGCTGATCCCTACACACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | GGTTTATCTCCCAGAGACCCCTGTGGGGGTGCCGAGTaGCATCGTTGTAGACCCAAGAGAGCCATTTGCTTT | + |
Preference number: 6 (lower is better) Translates to: GLSPRDPCGGAE*HRCRPKRAICF Trigger: AAAGCAAATGGCTCTCTTGGGTCTACAACGATGCCACTCGGCACCCCCACAGGGGTCTCTGGGAGATAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS TCA 72 bp | ACAGGTGGGAAGGGAACAGTTCTAGATAGCAGTCACTaGTGTCCTGGCTGTGCTGGAATCGCAGCCGAACCT | + |
Preference number: 6 (lower is better) Translates to: TGGKGTVLDSSH*CPGCAGIAAEP Trigger: AGGTTCGGCTGCGATTCCAGCACAGCCAGGACATCAGTGACTGCTATCTAGAACTGTTCCCTTCCCACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | CAGTTGAGCCAGATACTTCTCTTTGAGCTCTGCCCCTaGGAGACGGGCTACTGTCACTGGGCTTCATCTTCT | + |
Preference number: 6 (lower is better) Translates to: QLSQILLFELCP*ETGYCHWASSS Trigger: AGAAGATGAAGCCCAGTGACAGTAGCCCGTCTCCCAGGGGCAGAGCTCAAAGAGAAGTATCTGGCTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | GCCTTGGATGTCTGTAATCTTGTGGCGAGATGTAGCTaGTGGTGTGTAGGGATCAGCATAGAGCGGGGAGTG | + |
Preference number: 6 (lower is better) Translates to: ALDVCNLVARCS*WCVGISIERGV Trigger: CACTCCCCGCTCTATGCTGATCCCTACACACCACCAGCTACATCTCGCCACAAGATTACAGACATCCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | ATCCCTGCGAGAGACAGTCCTGAGGCACAGCAGCCATaGGCTATAATCCTCATAACTGGCACATACCACGCG | + |
Preference number: 6 (lower is better) Translates to: IPARDSPEAQQP*AIILITGTYHA Trigger: CGCGTGGTATGTGCCAGTTATGAGGATTATAGCCAATGGCTGCTGTGCCTCAGGACTGTCTCTCGCAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | TTCTTTTGGCCAGTGCTGACACAGTTAGAGTCGGTCTaGTTAGGTACAGGAGGGGCAGGGAAGCCTATAGTG | + |
Preference number: 6 (lower is better) Translates to: FFWPVLTQLESV*LGTGGAGKPIV Trigger: CACTATAGGCTTCCCTGCCCCTCCTGTACCTAACCAGACCGACTCTAACTGTGTCAGCACTGGCCAAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | GTCTGTATCGCACAGAGGAACTGCTCATCCAGGCCTTaGATGTCTGTAATCTTGTGGCGAGATGTAGCTGGT | + |
Preference number: 6 (lower is better) Translates to: VCIAQRNCSSRP*MSVILWRDVAG Trigger: ACCAGCTACATCTCGCCACAAGATTACAGACATCCAAGGCCTGGATGAGCAGTTCCTCTGTGCGATACAGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS CAA 72 bp | AACACTGGACACTCTAATTTCCAGCTGCTCCGTCCATaGGAAGAGAGTGAACCTCGGCCTCTACCTACAAGC | + |
Preference number: 6 (lower is better) Translates to: NTGHSNFQLLRP*EESEPRPLPTS Trigger: GCTTGTAGGTAGAGGCCGAGGTTCACTCTCTTCCAATGGACGGAGCAGCTGGAAATTAGAGTGTCCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 72 bp | TGTCTGTATCGCACAGAGGAACTGCTCATCCAGGCCTaGGATGTCTGTAATCTTGTGGCGAGATGTAGCTGG | + |
Preference number: 6 (lower is better) Translates to: CLYRTEELLIQA*DVCNLVARCSW Trigger: CCAGCTACATCTCGCCACAAGATTACAGACATCCAAGGCCTGGATGAGCAGTTCCTCTGTGCGATACAGACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105571.4 |
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CDS CAA 72 bp | CGATGTCTGTATCGCACAGAGGAACTCATCCAGGCCTaGGATGTCTGTAATCTTGTGGCGAGATGTAGCTGG | + |
Preference number: 6 (lower is better) Translates to: RCLYRTEELIQA*DVCNLVARCSW Trigger: CCAGCTACATCTCGCCACAAGATTACAGACATCCAAGGCCTGGATGAGTTCCTCTGTGCGATACAGACATCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CCA 72 bp | GATGTCTGTATCGCACAGAGGAACTCATCCAGGCCTTaGATGTCTGTAATCTTGTGGCGAGATGTAGCTGGT | + |
Preference number: 6 (lower is better) Translates to: DVCIAQRNSSRP*MSVILWRDVAG Trigger: ACCAGCTACATCTCGCCACAAGATTACAGACATCCAAGGCCTGGATGAGTTCCTCTGTGCGATACAGACATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217885.2 ENSMUST00000218699.2 |
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CDS CAA 90 bp | CCTTCGATGAGAAAGGAGCGAATCTCCTTTTCCTTCTCTTCTAAGTaGATATGGATGGCACTTAGTGGAAGCTCCCCCTTAAAGCTAAGG | + |
Preference number: 6 (lower is better) Translates to: PSMRKERISFSFSSK*IWMALSGSSPLKLR Trigger: CCTTAGCTTTAAGGGGGAGCTTCCACTAAGTGCCATCCATATCAACTTAGAAGAGAAGGAAAAGGAGATTCGCTCCTTTCTCATCGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105571.4 ENSMUST00000217885.2 ENSMUST00000218699.2 |