Pregenerated sensors for PLEKHM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034247Ensembl transcript IDs: ENSMUST00000041272.10, ENSMUST00000184350.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCCCTCTTGGAGCAGAAGGGTTGTGAGGGGCCTCGGGCATCACTaGGACTTCCTGCGCCTTCTCGGTAGGCTGGAGCTCTGGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: IPSWSRRVVRGLGHH*DFLRLLGRLELWAH Trigger: GTGTGCCCAGAGCTCCAGCCTACCGAGAAGGCGCAGGAAGTCCCAGTGATGCCCGAGGCCCCTCACAACCCTTCTGCTCCAAGAGGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041272.10 ENSMUST00000184350.2 |
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| 3UTR CCA 90 bp | CACCCAGCTCCATGCCTGCCTGGGCTGGGGCTGCTCTCACCCATCTaGTCGGGCGAAGGGTTGTATTTCTTGGGTGACTTGGGTAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: HPAPCLPGLGLLSPI*SGEGLYFLGDLGRS Trigger: TGACCTACCCAAGTCACCCAAGAAATACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATGGAGCTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | GCCCTGAGAACCTGCCTCAAAGATGGCCAAGGAGCACCCACCCACTaGCTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGT | + |
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Preference number: 1 (lower is better) Translates to: ALRTCLKDGQGAPTH*LRALKARKRSPGCC Trigger: ACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAGCCAGTGGGTGGGTGCTCCTTGGCCATCTTTGAGGCAGGTTCTCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | AGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGATaGCCAAGGAGCACCCACCCACTGGCTGAGGGCGCTCAAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSSPFALSPENLPQR*PRSTHPLAEGAQGQ Trigger: CTGGCCTTGAGCGCCCTCAGCCAGTGGGTGGGTGCTCCTTGGCCATCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | ACCCCCAACCTCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTaGGAACCTGCCTCAAAGATGGCCAAGGAGCACCCACCCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: TPNLQIQFLSLCSEP*EPASKMAKEHPPTG Trigger: GCCAGTGGGTGGGTGCTCCTTGGCCATCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGAGGTTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | CAGCCCAAGGATGGCACCTCTCCACAGATGGAGCTTGGAGCTCTCTaGTTTCTAGCCTACTCTACCCTGCAGGGTAAGGGGGCATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: QPKDGTSPQMELGAL*FLAYSTLQGKGAWG Trigger: TCCCCATGCCCCCTTACCCTGCAGGGTAGAGTAGGCTAGAAACCAGAGAGCTCCAAGCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | GCCAAGAGCTCCAACAGAGGGAGGGACGCTTTACAGGTGAGAACGTaGGGAGTGGAGGGAAAGGTGGCCACAGAACCCAGCCTCACAATG | + |
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Preference number: 1 (lower is better) Translates to: AKSSNRGRDALQVRT*GVEGKVATEPSLTM Trigger: CATTGTGAGGCTGGGTTCTGTGGCCACCTTTCCCTCCACTCCTCACGTTCTCACCTGTAAAGCGTCCCTCCCTCTGTTGGAGCTCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | GTGGTGAAGCTCTGCAGGCAGCTTTGGGGCAAATTCTCCTCTCTCTaGAGCCCAAGGATGGCACCTCTCCACAGATGGAGCTTGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: VVKLCRQLWGKFSSL*SPRMAPLHRWSLEL Trigger: GAGCTCCAAGCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | CTTCTTGCCCGAGAAGACCAACTCAAAACGTCCATCACTGTGTGCTaGCCCCACAGCCTCACATCGGAGCAGGGAGCAGCTCTCCACACA | + |
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Preference number: 1 (lower is better) Translates to: LLAREDQLKTSITVC*PHSLTSEQGAALHT Trigger: TGTGTGGAGAGCTGCTCCCTGCTCCGATGTGAGGCTGTGGGGCCAGCACACAGTGATGGACGTTTTGAGTTGGTCTTCTCGGGCAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| 3UTR TCA 90 bp | TTAGGTAAGCCAAGAGCTCCAACAGAGGGAGGGACGCTTTACAGGTaGGAACGTGAGGAGTGGAGGGAAAGGTGGCCACAGAACCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LGKPRAPTEGGTLYR*EREEWRERWPQNPA Trigger: GGCTGGGTTCTGTGGCCACCTTTCCCTCCACTCCTCACGTTCTCACCTGTAAAGCGTCCCTCCCTCTGTTGGAGCTCTTGGCTTACCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | TCCCTCGCTGCTTGGTCAGGCAAGTGTGCTCCATGGACCCTGAAATaGTCAGTGCATAGGACTAAGGGGAGCCAGGTAGTGTTTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SLAAWSGKCAPWTLK*SVHRTKGSQVVFPQ Trigger: CTGGGGAAACACTACCTGGCTCCCCTTAGTCCTATGCACTGAGCATTTCAGGGTCCATGGAGCACACTTGCCTGACCAAGCAGCGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | GGTGGCCACAGAACCCAGCCTCACAATGACAGGCCATTTGGCACATaGCACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GGHRTQPHNDRPFGT*HLHSWQYVPERAEA Trigger: TGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCTGTGGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | TCTGGGGGCTTTGGTGTTTCAACCACTGGTGAGCGCTGTCTTCCATaGCGGACAGATGAACTCTTGGCAGCCTCTGCCATCTGCCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SGGFGVSTTGERCLP*RTDELLAASAICLP Trigger: AGGAAGGCAGATGGCAGAGGCTGCCAAGAGTTCATCTGTCCGTCATGGAAGACAGCGCTCACCAGTGGTTGAAACACCAAAGCCCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | CAAGAGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTaGTGCAGTGTCCTGCTGGGCAGGGTGAAAACTCAAGAAATGCTA | + |
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Preference number: 1 (lower is better) Translates to: QEPLEGNPTPGKPFG*CSVLLGRVKTQEML Trigger: TAGCATTTCTTGAGTTTTCACCCTGCCCAGCAGGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | CTAGCAGTAGACAGGCCTCTGGAGTCTTTAATCCGTGAGTGTAGGTaGCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LAVDRPLESLIRECR*QGPVSLFASLHAQS Trigger: ACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTACACTCACGGATTAAAGACTCCAGAGGCCTGTCTACTGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | CAAGGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTTaGGGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTC | + |
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Preference number: 1 (lower is better) Translates to: QGFVRLRVVKLCRQL*GKFSSLCSPRMAPL Trigger: GAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | CGTGAGGAGTGGAGGGAAAGGTGGCCACAGAACCCAGCCTCACAATaGCAGGCCATTTGGCACATGACACTTGCACTCTTGGCAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: REEWRERWPQNPASQ*QAIWHMTLALLAVC Trigger: ACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCTGTGGCCACCTTTCCCTCCACTCCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | CTTGAAAACAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTTaGGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LENNSRMWPSDPRAS*GQPYSWEALWVLQC Trigger: ACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTTTTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | ACAGAACCCAGCCTCACAATGACAGGCCATTTGGCACATGACACTTaGACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCACC | + |
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Preference number: 1 (lower is better) Translates to: TEPSLTMTGHLAHDT*TLGSMCQKGQRQST Trigger: GGTGCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | GTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTaGCCATTCAGGATCCCAAAACAAGGAAAGGAGGCTCTGATCAGG | + |
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Preference number: 1 (lower is better) Translates to: VLEYPHVTGPQGTDS*PFRIPKQGKEALIR Trigger: CCTGATCAGAGCCTCCTTTCCTTGTTTTGGGATCCTGAATGGGCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CCA 90 bp | TATAGGGAGAAGAGGAAGCCTAGGCCAATGACAGACCCAGATGGATaGCCCCAGAAAGTTGGGACAGCGGGGTTAACTGACAACGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: YREKRKPRPMTDPDG*PQKVGTAGLTDNVL Trigger: CAGAACGTTGTCAGTTAACCCCGCTGTCCCAACTTTCTGGGGCCATCCATCTGGGTCTGTCATTGGCCTAGGCTTCCTCTTCTCCCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| 3UTR TCA 90 bp | CAGACTCTTGCCCATTCAGGATCCCAAAACAAGGAAAGGAGGCTCTaGTCAGGTTGTAGTTTGGGGGACGTGTTAATGCTAGCTCGGGGG | + |
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Preference number: 1 (lower is better) Translates to: QTLAHSGSQNKERRL*SGCSLGDVLMLARG Trigger: CCCCCGAGCTAGCATTAACACGTCCCCCAAACTACAACCTGATCAGAGCCTCCTTTCCTTGTTTTGGGATCCTGAATGGGCAAGAGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR TCA 90 bp | CATGCTTTGTCTAATGCCCCCAAGGAACAGCTCTTTCTTGGTCCTTaGGAAAAAGGCCCGTGGAGAGCAGCCCTTGACTCTGGAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: HALSNAPKEQLFLGP*EKGPWRAALDSGVS Trigger: AGACACTCCAGAGTCAAGGGCTGCTCTCCACGGGCCTTTTTCTCAAGGACCAAGAAAGAGCTGTTCCTTGGGGGCATTAGACAAAGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| 3UTR TCA 90 bp | TGCTGCAGTGTCCTGCTGGGCAGGGTGAAAACTCAAGAAATGCTATaGACTCAAGGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CCSVLLGRVKTQEML*TQGFVRLRVVKLCR Trigger: CCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCCTTGAGTTCATAGCATTTCTTGAGTTTTCACCCTGCCCAGCAGGACACTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | CTCTTGGCAGCCTCTGCCATCTGCCTTCCTACTCCTATGTTTTATTaGACAATTCAAGCTTCAGGTGACTCAGCTCATTCACCTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLAASAICLPTPMFY*TIQASGDSAHSPQG Trigger: TCCCTGAGGTGAATGAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGCAGATGGCAGAGGCTGCCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | ATTGAGATTCAGAAACAAGACTGCTTAGAAAGGCCAGCTCTTTACTaGAAAATCACTCAAATACCACACAGCAGCAGTTTCTCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: IEIQKQDCLERPALY*KITQIPHSSSFSSA Trigger: TGCAGAGGAGAAACTGCTGCTGTGTGGTATTTGAGTGATTTTGCAGTAAAGAGCTGGCCTTTCTAAGCAGTCTTGTTTCTGAATCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR GCA 90 bp | GTAGTGTTTCCCCAGAGCCAAATGATTGAGATTCAGAAACAAGACTaGTTAGAAAGGCCAGCTCTTTACTGCAAAATCACTCAAATACCA | + |
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Preference number: 1 (lower is better) Translates to: VVFPQSQMIEIQKQD*LERPALYCKITQIP Trigger: TGGTATTTGAGTGATTTTGCAGTAAAGAGCTGGCCTTTCTAAGCAGTCTTGTTTCTGAATCTCAATCATTTGGCTCTGGGGAAACACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTGCCTGGGCTGGGGCTGCTCTCACCCATCTGGTCGGGCGAAGGGTTGTGGGGAAGCCAGGCCCTaGGCAGAGGCACCTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HACLGWGCSHPSGRAKGCGEARP*AEAPAG Trigger: TCCAGCAGGTGCCTCTGCCCAGGGCCTGGCTTCCCC...ACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTGCCTGGGCTGGGGCTGCTCTCACCCATCTGGTCGGGCGAAGGGTTGTACAGACCCAGATGGATaGCCCCAGAAAGTTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: HACLGWGCSHPSGRAKGCTDPDG*PQKVGT Trigger: TGTCCCAACTTTCTGGGGCCATCCATCTGGGTCTGT...ACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACAGGTTCCATGCCTGCCTGGGCTaGGGCTGCTCTCACCCATCT | + |
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Preference number: 2 (lower is better) Translates to: ALMLAAQTLGGLHLLDRFHACLG*GCSHPS Trigger: AGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATG...GAACCTGTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCACCCAGCTCCATGCCTaGCTGGGCTGGGGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCTQLHA*LGWGCS Trigger: AGAGCAGCCCCAGCCCAGGCAGGCATGGAGCTGGGT...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCGCCCGCAGCCTACATTCCCTCACTTACCTCTTCTCCCTCGCTGCTTGGAGTGGAGGGAAAGGTaGCCACAGAACCCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HLRPQPTFPHLPLLPRCLEWRER*PQNPAS Trigger: TGAGGCTGGGTTCTGTGGCCACCTTTCCCTCCACTC...CAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAGGCTGCGGGCGCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTTGGGGCAAATTCTGCCTGGGCTGGGGCTaGTCTCACCCATCTGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: GFVRLRVVKLCRQLWGKFCLGWG*SHPSGR Trigger: CCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCA...GAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGTCCGCACCTCTCCACAGATaGAGCTTGGAGCTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLLRATLLLGSPLGAAVSAPLHR*SLELSG Trigger: ACCAGAGAGCTCCAAGCTCCATCTGTGGAGAGGTGC...GGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGGTGGGGGCTTCTCCTaGAGCTCCTGGGGAAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSGGGFS*SSWGRL Trigger: TAGCCTTCCCCAGGAGCTCCAGGAGAAGCCCCCACC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTCTAACGGAGGAGCCATaGCAGCCGGGGAAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SLFASLHAQSPAFTGCVCLTEEP*QPGKPG Trigger: GCCTGGCTTCCCCGGCTGTCATGGCTCCTCCGTTAG...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGACCCAAGAGCCTCTTaGGGGCAACCCTACTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSDPRAS*GQPYSW Trigger: CCAGGAGTAGGGTTGCCCTCAAGAGGCTCTTGGGTC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACGCAGCCTCTGCCATCTaGCTTCCTACTCCTATGTTT | + |
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Preference number: 2 (lower is better) Translates to: GPALMLAAQTLGGLHLLDAASAI*LPTPMF Trigger: AAACATAGGAGTAGGAAGGCAGATGGCAGAGGCTGC...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGGCAGAGGCACCTGCTaGATCCCCTCTTGGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSGRGTC*IPSWSR Trigger: TCTGCTCCAAGAGGGGATCCAGCAGGTGCCTCTGCC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTCTGCAGGCAGCTTTaGGGCAAATTCTCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VGARARFPCLPLSMPRVLLCRQL*GKFSSL Trigger: GAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAG...CAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGGGCAACCCTACTCCTaGGAAGCCCTTTGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSGQPYS*EALWVL Trigger: CAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR CAA 90 bp | AGCTCGGGGGTGCAGATAGAGATACACTGGGTGGTTCTGGGGGCTTaGGTGTTTCAACCACTGGTGAGCGCTGTCTTCCATGACGGACAG | + |
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Preference number: 2 (lower is better) Translates to: SSGVQIEIHWVVLGA*VFQPLVSAVFHDGQ Trigger: CTGTCCGTCATGGAAGACAGCGCTCACCAGTGGTTGAAACACCAAAGCCCCCAGAACCACCCAGTGTATCTCTATCTGCACCCCCGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGTCCAATGACAGACCCAGATaGATGGCCCCAGAAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: SLLRATLLLGSPLGAAVSNDRPR*MAPESW Trigger: CCAACTTTCTGGGGCCATCCATCTGGGTCTGTCATT...GGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGAACAATTCCAGGATGTaGCCATCAGACCCAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VGARARFPCLPLSMPRVLNNSRM*PSDPRA Trigger: GGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTT...CAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGCGGGGCTGGAGCTGGCTaGGCATTTCCACAGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LPSVHHTEVFMVLCHPWSGAGAG*AFPQAC Trigger: ACAGGCCTGTGGAAATGCCCAGCCAGCTCCAGCCCC...GCTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGGCTTTGAGGAACCCTTCATATACCCCCTCTGCAATCTGCTGGAGGTCAAGCTGGAGCTGGGGCTaGAGCTGGCTGGGCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: IRALRNPSYTPSAICWRSSWSWG*SWLGIS Trigger: GGAAATGCCCAGCCAGCTCCAGCCCCAGCTCCAGCT...TGACCTCCAGCAGATTGCAGAGGGGGTATATGAAGGGTTCCTCAAAGCCCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCTTACAGGTGAGAACGTaGGGAGTGGAGGGAAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSLQVRT*GVEGKV Trigger: CACCTTTCCCTCCACTCCTCACGTTCTCACCTGTAA...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTCAGGGCTGTGACCATCAACTTGAAAACAATTCCAGGATGTGGCCATCAGAAGGGGGCATGGGGATaGGGTGGGCAAGGTCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLRAVTINLKTIPGCGHQKGAWG*GGQGHG Trigger: GCCATGACCTTGCCCACCTCATCCCCATGCCCCCTT...CTGATGGCCACATCCTGGAATTGTTTTCAAGTTGATGGTCACAGCCCTGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTCAGGGCTGTGACCATCAACTTGAAAACAATTCCAGGATGTGGCCATCAGGGGAAGCCCTTTGGGTaGTGCAGTGTCCTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLRAVTINLKTIPGCGHQGKPFG*CSVLLG Trigger: GCCCAGCAGGACACTGCAGCACCCAAAGGGCTTCCC...CTGATGGCCACATCCTGGAATTGTTTTCAAGTTGATGGTCACAGCCCTGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCACTCTTGGCAGCCTCTaGCATCTGCCTTCCTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCTLGSL*HLPSYS Trigger: GGAGTAGGAAGGCAGATGGCAGAGGCTGCCAAGAGT...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 90 bp | GAGGGAAAGGTGGCCACAGAACCCAGCCTCACAATGACAGGCCATTaGGCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EGKVATEPSLTMTGH*AHDTCTLGSMCQKG Trigger: CCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCTGTGGCCACCTTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 90 bp | TCAAGGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTaGGGGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SRLCETKGGEALQAA*GQILLSLQPKDGTS Trigger: AGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 90 bp | CTGGAGTCTTTAATCCGTGAGTGTAGGTGCCAGGGCCCGGTTTCCTaGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LESLIRECRCQGPVS*FASLHAQSPAFTGC Trigger: ACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTACACTCACGGATTAAAGACTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGAGCGCTGTCTTCCATaGCGGACAGATGAACTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSERCLP*RTDELL Trigger: CAAGAGTTCATCTGTCCGTCATGGAAGACAGCGCTC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | TTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGCGTGGAGAGCAGCCCTTaGCTCTGGAGTGTCTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LPSVHHTEVFMVLCHPWSVESSP*LWSVLH Trigger: GTGCAAGACACTCCAGAGTCAAGGGCTGCTCTCCAC...GCTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGAATCACTGGGACTTCCTaGGCCTTCTCGGTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SKSSSSPFALSPENLPQRITGTS*AFSVGW Trigger: CCAGCCTACCGAGAAGGCGCAGGAAGTCCCAGTGAT...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCCATTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCATCACTGGGACTTCCTaGGCCTTCTCGGTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PHLPSVHHTEVFMVLCHPITGTS*AFSVGW Trigger: CCAGCCTACCGAGAAGGCGCAGGAAGTCCCAGTGAT...GGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAATGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTGAAAACAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTTGAGGGCAAGCCCTTTGGGTGCTaGAGTGTCCTGCTGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NLKTIPGCGHQTQEPLEGKPFGC*SVLLGR Trigger: CCTGCCCAGCAGGACACTGCAGCACCCAAAGGGCTT...GCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTTTTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CCA 90 bp | AACTTGAAAACAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTTGAGGGCGGCATGGGGATGAGGTaGGCAAGGTCATGGCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NLKTIPGCGHQTQEPLEGGMGMR*ARSWPS Trigger: GGAAGGCCATGACCTTGCCCACCTCATCCCCATGCC...GCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTTTTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTTGGGGCAAATTCTCTGCAGCCCAAGGATaGCACCTCTCCACAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: GFVRLRVVKLCRQLWGKFSAAQG*HLSTDG Trigger: TCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGA...GAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 90 bp | GGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTaGCCCATTCAGGATCCCAAAACAAGGAAAGGAGGCTCTGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: GSGIPSCDRPTGDRL*PIQDPKTRKGGSDQ Trigger: CTGATCAGAGCCTCCTTTCCTTGTTTTGGGATCCTGAATGGGCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 90 bp | CCACTGGCTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTaGTCTTTTTCTGTCCCATTTTTCTGCAACCTGGTTTCCCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLAEGAQGQETKPWM*SFSVPFFCNLVSLG Trigger: TCCTAGGGAAACCAGGTTGCAGAAAAATGGGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAGCCAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTTCCATGACGGACAGATaGACTCTTGGCAGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLFASLHAQSPAFTGCVCSMTDR*TLGSLC Trigger: GCAGAGGCTGCCAAGAGTTCATCTGTCCGTCATGGA...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCACTCTTGGCAGTATGTaGCAGAAAGGGCAGAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSTLGSM*QKGQRQ Trigger: TTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGT...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTCAGGGCTGTGACCATCAACTTGAAAACAATTCCAGGATGTGGCCATCAGGAAGGCTCAAAGTGCTaGCAGTGCTGGTGCTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CLRAVTINLKTIPGCGHQEGSKC*QCWCWS Trigger: TGACCAGCACCAGCACTGTCAGCACTTTGAGCCTTC...CTGATGGCCACATCCTGGAATTGTTTTCAAGTTGATGGTCACAGCCCTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGGCTTTGAGGAACCCTTCATATACCCCCTCTGCAATCTGCTGGAGGTCAACAGACCCAGATGGATaGCCCCAGAAAGTTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: IRALRNPSYTPSAICWRSTDPDG*PQKVGT Trigger: TGTCCCAACTTTCTGGGGCCATCCATCTGGGTCTGT...TGACCTCCAGCAGATTGCAGAGGGGGTATATGAAGGGTTCCTCAAAGCCCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCGTGCTGGTCACCCCCTaGTCCTGCTGTGCTGTACTC | + |
|
Preference number: 2 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLVLVTP*SCCAVL Trigger: GAGTACAGCACAGCAGGAGCAGGGGGTGACCAGCAC...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | AACTTGAAAACAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTTGAGGGCAAATTCTCCTCTCTCTaGAGCCCAAGGATGGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: NLKTIPGCGHQTQEPLEGKFSSL*SPRMAP Trigger: AGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTT...GCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTTTTCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTAAGGCCAGCTCTTTACTaGAAAATCACTCAAATACCA | + |
|
Preference number: 2 (lower is better) Translates to: ARARFPCLPLSMPRVLLLRPALY*KITQIP Trigger: TGGTATTTGAGTGATTTTGCAGTAAAGAGCTGGCCT...TAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGAATGACAGACCCAGATaGATGGCCCCAGAAAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FAFGAPHRSFYGLVSPLENDRPR*MAPESW Trigger: CCAACTTTCTGGGGCCATCCATCTGGGTCTGTCATT...CTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCAAGGGTTGTATTTCTTaGGTGACTTGGGTAGGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCKGCIS*VTWVGQ Trigger: TTGACCTACCCAAGTCACCCAAGAAATACAACCCTT...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCACTCAAGAAATGCTATaGACTCAAGGCTTTGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRALKARKRSPGCCLFLSTQEML*TQGFVR Trigger: TCTCACAAAGCCTTGAGTTCATAGCATTTCTTGAGT...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCAGGGTGGTGAAGCTCTaGAGGCAGCTTTGGGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLRVVKL*RQLWGK Trigger: TTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCT...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACAGGTTCACTCCTATGTTTTATTaGACAATTCAAGCTTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ALMLAAQTLGGLHLLDRFTPMFY*TIQASG Trigger: ACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGT...GAACCTGTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGGCTTTGAGGAACCCTTCATATACCCCCTCTGCAATCTGCTGGAGGTCAACACAGAAGTTTTTATaGTCTTGTGTCACCCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IRALRNPSYTPSAICWRSTQKFL*SCVTPG Trigger: TCCAGGGGTGACACAAGACCATAAAAACTTCTGTGT...TGACCTCCAGCAGATTGCAGAGGGGGTATATGAAGGGTTCCTCAAAGCCCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR GCA 72 bp | AGCAGCAGCGCAAGTGCCAGGCGCCTCCCCCGGGCCTaGCACCCCCAACCTCCAAATCCAGTTCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSASARRLPRA*HPQPPNPVPLP Trigger: AGGGAGAGGAACTGGATTTGGAGGTTGGGGGTGGCAGGCCCGGGGGAGGCGCCTGGCACTTGCGCTGCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | CAGGCCCTGGGCAGAGGCACCTGCTGGATCCCCTCTTaGAGCAGAAGGGTTGTGAGGGGCCTCGGGCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: QALGRGTCWIPS*SRRVVRGLGHH Trigger: GTGATGCCCGAGGCCCCTCACAACCCTTCTGCTCCAAGAGGGGATCCAGCAGGTGCCTCTGCCCAGGGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041272.10 ENSMUST00000184350.2 |
||
| 3UTR GCA 72 bp | CTGTCCACCCAGCTCCATGCCTGCCTGGGCTGGGGCTaGTCTCACCCATCTGGTCGGGCGAAGGGTTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LSTQLHACLGWG*SHPSGRAKGCI Trigger: AATACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATGGAGCTGGGTGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | TGGAGCAGAAGGGTTGTGAGGGGCCTCGGGCATCACTaGGACTTCCTGCGCCTTCTCGGTAGGCTGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WSRRVVRGLGHH*DFLRLLGRLEL Trigger: GAGCTCCAGCCTACCGAGAAGGCGCAGGAAGTCCCAGTGATGCCCGAGGCCCCTCACAACCCTTCTGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041272.10 ENSMUST00000184350.2 |
||
| 3UTR CCA 72 bp | CCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGATaGCCAAGGAGCACCCACCCACTGGCTGAGGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: PFALSPENLPQR*PRSTHPLAEGA Trigger: AGCGCCCTCAGCCAGTGGGTGGGTGCTCCTTGGCCATCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | CCATGCCTGCCTGGGCTGGGGCTGCTCTCACCCATCTaGTCGGGCGAAGGGTTGTATTTCTTGGGTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: PCLPGLGLLSPI*SGEGLYFLGDL Trigger: CAAGTCACCCAAGAAATACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAAGGTCATGGCCTTCCTGAGCAGGGAAGGCTCAAAGTGCTGACAGTGCTGCTGGATCCCCTCTaGGAGCAGAAGGGTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGQGHGLPEQGRLKVLTVLLDPL*EQKGCE Trigger: CTCACAACCCTTCTGCTCCAAGAGGGGATCCAGCAG...CACTGTCAGCACTTTGAGCCTTCCCTGCTCAGGAAGGCCATGACCTTGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGTCCTGGTCGGGCGAAGGGTaGTATTTCTTGGGTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLRATLLLGSPLGAAVSWSGEG*YFLGDL Trigger: CAAGTCACCCAAGAAATACAACCCTTCGCCCGACCA...GGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | CCAAGAGCTCCAACAGAGGGAGGGACGCTTTACAGGTaGGAACGTGAGGAGTGGAGGGAAAGGTGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PRAPTEGGTLYR*EREEWRERWPQ Trigger: CTGTGGCCACCTTTCCCTCCACTCCTCACGTTCTCACCTGTAAAGCGTCCCTCCCTCTGTTGGAGCTCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | GAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTaGAGTGTCCTGCTGGGCAGGGTGAAAACTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGNPTPGKPFGC*SVLLGRVKTQE Trigger: TTCTTGAGTTTTCACCCTGCCCAGCAGGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | CTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTaGTGCAGTGTCCTGCTGGGCAGGGTGAAAACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LEGNPTPGKPFG*CSVLLGRVKTQ Trigger: TTGAGTTTTCACCCTGCCCAGCAGGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | ATGCCAGCACTTTCCGGACCAGGTCTCTCCAGTGGGTaGCCTCCTCGGTGTTTTTGGCCTGCAGTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MPALSGPGLSSG*PPRCFWPAVSG Trigger: TCCTGAAACTGCAGGCCAAAAACACCGAGGAGGCCACCCACTGGAGAGACCTGGTCCGGAAAGTGCTGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR TCA 72 bp | CGTGAGCACTCTTCTGGTGGGGGCAAGTCTCTCACTTaGGCAGTCAGTCAGTCGCTTAGTCAAGGACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: REHSSGGGKSLT*AVSQSLSQGQG Trigger: GCCCTGTCCTTGACTAAGCGACTGACTGACTGCTCAAGTGAGAGACTTGCCCCCACCAGAAGAGTGCTCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | TCGCTGCTTGGTCAGGCAAGTGTGCTCCATGGACCCTaGAATGCTCAGTGCATAGGACTAAGGGGAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLGQASVLHGP*NAQCIGLRGAR Trigger: CCTGGCTCCCCTTAGTCCTATGCACTGAGCATTTCAGGGTCCATGGAGCACACTTGCCTGACCAAGCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAAAGGCACCCACCTaGGCCCGCAGCCTACATTCCCTCACTTACCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ERERERERKAPT*ARSLHSLTYLF Trigger: GAAGAGGTAAGTGAGGGAATGTAGGCTGCGGGCGCAGGTGGGTGCCTTTCTCTCTCTCTCTCTCTCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | GTGCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATaGCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VPGPGFLVCLSP*PESCFYRVCVC Trigger: ACACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGTGGTTCTGGGGGCTTaGGTGTTTCAACCACTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LRALKARKRSPGCCLFLSVVLGA*VFQPLV Trigger: CACCAGTGGTTGAAACACCAAAGCCCCCAGAACCAC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | CAGCCTACATTCCCTCACTTACCTCTTCTCCCTCGCTaGTTGGTCAGGCAAGTGTGCTCCATGGACCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPTFPHLPLLPR*LVRQVCSMDPE Trigger: TTCAGGGTCCATGGAGCACACTTGCCTGACCAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | GACAGGCCTCTGGAGTCTTTAATCCGTGAGTGTAGGTaGCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: DRPLESLIRECR*QGPVSLFASLH Trigger: ATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTACACTCACGGATTAAAGACTCCAGAGGCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | GTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTTaGGGCAAATTCTCCTCTCTCTGCAGCCCAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VRLRVVKLCRQL*GKFSSLCSPRM Trigger: CATCCTTGGGCTGCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | AAGAGGAAGCCTAGGCCAATGACAGACCCAGATGGATaGCCCCAGAAAGTTGGGACAGCGGGGTTAACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KRKPRPMTDPDG*PQKVGTAGLTD Trigger: GTCAGTTAACCCCGCTGTCCCAACTTTCTGGGGCCATCCATCTGGGTCTGTCATTGGCCTAGGCTTCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCCTGCTGGATCCCCTCTaGGAGCAGAAGGGTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PHLPSVHHTEVFMVLCHPLLDPL*EQKGCE Trigger: CTCACAACCCTTCTGCTCCAAGAGGGGATCCAGCAG...GGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAATGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTAGACCCAAGAGCCTCTaGAGGGCAACCCTACTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLFASLHAQSPAFTGCVCRPKSL*RATLLL Trigger: CAGGAGTAGGGTTGCCCTCAAGAGGCTCTTGGGTCT...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGCCGTGGAGAGCAGCCCTaGACTCTGGAGTGTCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPSVHHTEVFMVLCHPWSRGEQP*TLECLA Trigger: TGCAAGACACTCCAGAGTCAAGGGCTGCTCTCCACG...GCTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR TCA 72 bp | CTCCATCTCCTAGACAGGTTCTGGAATACCCTCATGTaGCAGGCCCACAGGGGACAGACTCTTGCCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHLLDRFWNTLM*QAHRGQTLAHS Trigger: TGAATGGGCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCTAGGAGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | GTGAGCGCTGTCTTCCATGACGGACAGATGAACTCTTaGCAGCCTCTGCCATCTGCCTTCCTACTCCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: VSAVFHDGQMNS*QPLPSAFLLLC Trigger: ACATAGGAGTAGGAAGGCAGATGGCAGAGGCTGCCAAGAGTTCATCTGTCCGTCATGGAAGACAGCGCTCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | CTACATTCCCTCACTTACCTCTTCTCCCTCGCTGCTTaGTCAGGCAAGTGTGCTCCATGGACCCTGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LHSLTYLFSLAA*SGKCAPWTLKC Trigger: GCATTTCAGGGTCCATGGAGCACACTTGCCTGACCAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | TTTGGTGTTTCAACCACTGGTGAGCGCTGTCTTCCATaGCGGACAGATGAACTCTTGGCAGCCTCTGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: FGVSTTGERCLP*RTDELLAASAI Trigger: GATGGCAGAGGCTGCCAAGAGTTCATCTGTCCGTCATGGAAGACAGCGCTCACCAGTGGTTGAAACACCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | TCTAATGCCCCCAAGGAACAGCTCTTTCTTGGTCCTTaGGAAAAAGGCCCGTGGAGAGCAGCCCTTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SNAPKEQLFLGP*EKGPWRAALDS Trigger: AGAGTCAAGGGCTGCTCTCCACGGGCCTTTTTCTCAAGGACCAAGAAAGAGCTGTTCCTTGGGGGCATTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR GCA 72 bp | ACTCAAGGCTTTGTGAGACTAAGGGTGGTGAAGCTCTaGAGGCAGCTTTGGGGCAAATTCTCCTCTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TQGFVRLRVVKL*RQLWGKFSSLC Trigger: GCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGTGCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGACTGCCAAGGCTCACTaGTCAGAATATTGCATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGARARFPCLPLSMPRVLTAKAH*SEYCIK Trigger: TTTTATGCAATATTCTGACAAGTGAGCCTTGGCAGT...CAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGCGCTCTTTCTTGGTCCTaGAGAAAAAGGCCCGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSVHHTEVFMVLCHPWSALSWS*RKRPVE Trigger: CTCCACGGGCCTTTTTCTCAAGGACCAAGAAAGAGC...GCTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGGGCTTTGAGGAACCCTTCATATACCCCCTCTGCAATCTGCTGGAGGTCAGAAGTTTTTATGGTCTaGTGTCACCCCTGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IRALRNPSYTPSAICWRSEVFMV*CHPWSW Trigger: CCAGCTCCAGGGGTGACACAAGACCATAAAAACTTC...TGACCTCCAGCAGATTGCAGAGGGGGTATATGAAGGGTTCCTCAAAGCCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR TCA 72 bp | AGAACCCAGCCTCACAATGACAGGCCATTTGGCACATaGCACTTGCACTCTTGGCAGTATGTGCCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTQPHNDRPFGT*HLHSWQYVPER Trigger: CCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | CCTGTTCCTTTCATTATAGGAGGCACTTTCTGGGGATaGGAACTCCAGTTTGCCCATCCCCCTCTAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVPFIIGGTFWG*ELQFAHPPLDR Trigger: CCTGTCTAGAGGGGGATGGGCAAACTGGAGTTCTCATCCCCAGAAAGTGCCTCCTATAATGAAAGGAACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR TCA 72 bp | GGGGAGCCAGGTAGTGTTTCCCCAGAGCCAAATGATTaGGATTCAGAAACAAGACTGCTTAGAAAGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GEPGSVSPEPND*DSETRLLRKAS Trigger: GCTGGCCTTTCTAAGCAGTCTTGTTTCTGAATCTCAATCATTTGGCTCTGGGGAAACACTACCTGGCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CCA 72 bp | CAGATACAAAAGGGACTCTTTGATAGCATCTGGTTCTaGAACCTGGGCAGATGTCCAGTCCAACTGCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: QIQKGLFDSIWF*NLGRCPVQLHA Trigger: GGCATGCAGTTGGACTGGACATCTGCCCAGGTTCCAGAACCAGATGCTATCAAAGAGTCCCTTTTGTATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| 3UTR TCA 72 bp | GCCCATTCAGGATCCCAAAACAAGGAAAGGAGGCTCTaGTCAGGTTGTAGTTTGGGGGACGTGTTAATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AHSGSQNKERRL*SGCSLGDVLML Trigger: TAGCATTAACACGTCCCCCAAACTACAACCTGATCAGAGCCTCCTTTCCTTGTTTTGGGATCCTGAATGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | CTCAAATACCACACAGCAGCAGTTTCTCCTCTGCACTaGCAAGGCTCACTTGTCAGAATATTGCATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: LKYHTAAVSPLH*QGSLVRILHKI Trigger: TATTTTATGCAATATTCTGACAAGTGAGCCTTGGCAGTGCAGAGGAGAAACTGCTGCTGTGTGGTATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR GCA 72 bp | CAGAAACAAGACTGCTTAGAAAGGCCAGCTCTTTACTaGAAAATCACTCAAATACCACACAGCAGCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QKQDCLERPALY*KITQIPHSSSF Trigger: GAAACTGCTGCTGTGTGGTATTTGAGTGATTTTGCAGTAAAGAGCTGGCCTTTCTAAGCAGTCTTGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CATGCCTGCCTGGGCTGGGGCTGCTCTCACCCATCTGGTCGGGCGAAGGGTTGTGGGGAGGCTGTCTGGTaGAGCCTCTGGGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HACLGWGCSHPSGRAKGCGEAVW*SLWGIL Trigger: GAGGATGCCCCAGAGGCTCCACCAGACAGCCTCCCC...ACAACCCTTCGCCCGACCAGATGGGTGAGAGCAGCCCCAGCCCAGGCAGGCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGACCCTCCATTCCACCTGAGGCCCCTGGCTCTAAGTGCTCTGGGGTAGCCGGCCCCGGAATGGGTTaGACAGCCCCATTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRPSIPPEAPGSKCSGVAGPGMG*TAPFAF Trigger: GAAGGCAAATGGGGCTGTCCAACCCATTCCGGGGCC...GGCTACCCCAGAGCACTTAGAGCCAGGGGCCTCAGGTGGAATGGAGGGTCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGTCCTGTGCTTCTTCCTTTTaGCGCCAGCCTCGGCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLRATLLLGSPLGAAVSCASSF*RQPRRG Trigger: TCCGCGCCGAGGCTGGCGGCAAAAGGAAGAAGCACA...GGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACCCCAGAAGTTTCAGCTaGTCCCGGCTCCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GPALMLAAQTLGGLHLLDPRSFS*SRLLPM Trigger: CATTGGCAGGAGCCGGGAGCAGCTGAAACTTCTGGG...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAAGGTCATGGCCTTCCTGAGCAGGGAAGGCTCAAAGTGCTGACAGTGAGCTGGGGCTGGAGCTaGCTGGGCATTTCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGQGHGLPEQGRLKVLTVSWGWS*LGISTG Trigger: GCCTGTGGAAATGCCCAGCCAGCTCCAGCCCCAGCT...CACTGTCAGCACTTTGAGCCTTCCCTGCTCAGGAAGGCCATGACCTTGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACCGGATGTGCTTGGCATaGAGGCCGTGGATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GPALMLAAQTLGGLHLLDRMCLA*RPWMNT Trigger: TGTGTTCATCCACGGCCTGCATGCCAAGCACATCCG...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTAGGGGCTGGAGCTGGCTaGGCATTTCCACAGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARARFPCLPLSMPRVLLLGAGAG*AFPQAC Trigger: ACAGGCCTGTGGAAATGCCCAGCCAGCTCCAGCCCC...TAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | TCCACAGATGGAGCTTGGAGCTCTCTGGTTTCTAGCCTACTCTACCCTGCAGGGAGGGAGAGGGGCGTCTaGAACATGGGGGTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: STDGAWSSLVSSLLYPAGRERGV*NMGVSG Trigger: GCCAGACACCCCCATGTTCCAGACGCCCCTCTCCCT...CCCTGCAGGGTAGAGTAGGCTAGAAACCAGAGAGCTCCAAGCTCCATCTGTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCCAAGGGCCACTCCCTTaGCCAGCTGCTCCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCQGPLP*PAAPPT Trigger: TGTGGGTGGAGCAGCTGGCCAAGGGAGTGGCCCTTG...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCTCCTCAGCCTCGTCTTaGGAGGAGGCACGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRALKARKRSPGCCLFLSSSASS*EEARRA Trigger: GGCTCTCCGTGCCTCCTCCCAAGACGAGGCTGAGGA...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCGCTGCTGGTCTGAAGTaGTCTGTGCAGGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSAAGLK*SVQGQL Trigger: AAGCTGGCCCTGCACAGAGCACTTCAGACCAGCAGC...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACAGCTCTCCACACAGGTaGGTTCCTCATCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPALMLAAQTLGGLHLLDSSPHR*VPHHSS Trigger: ACTTGAGTGATGAGGAACGCACCTGTGTGGAGAGCT...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCAGCTGGAGCTGGGGCTaGAGCTGGCTGGGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSSWSWG*SWLGIS Trigger: GGAAATGCCCAGCCAGCTCCAGCCCCAGCTCCAGCT...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CACCTGCGCCCGCAGCCTACATTCCCTCACTTACCTCTTCTCCCTCGCTGCTTGGCAGGATGTCTCGGATaGTCTCCACTCCATGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLRPQPTFPHLPLLPRCLAGCLG*SPLHGY Trigger: ATAGCCATGGAGTGGAGACCATCCGAGACATCCTGC...CAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAGGCTGCGGGCGCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR TCA 90 bp | TCCACAGATGGAGCTTGGAGCTCTCTGGTTTCTAGCCTACTCTACCCTGCAGGGGTGGAGAGCAGCCCTTaGCTCTGGAGTGTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STDGAWSSLVSSLLYPAGVESSP*LWSVLH Trigger: GTGCAAGACACTCCAGAGTCAAGGGCTGCTCTCCAC...CCCTGCAGGGTAGAGTAGGCTAGAAACCAGAGAGCTCCAAGCTCCATCTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | CACCTGCGCCCGCAGCCTACATTCCCTCACTTACCTCTTCTCCCTCGCTGCTTGTGGTCCGCTGCTTGGTaGAGAATTTACCTGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLRPQPTFPHLPLLPRCLWSAAW*RIYLGF Trigger: AAAGCCCAGGTAAATTCTGCACCAAGCAGCGGACCA...CAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAGGCTGCGGGCGCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTTCTGTTCCTGGTACTTaGGCCGGCGGGCACATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLHAQSPAFTGCVCSVPGT*AGGHIG Trigger: CCCGATGTGCCCGCCGGCGCAAGTACCAGGAACAGA...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGGATAGCATCTGGTTCTaGAACCTGGGCAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGARARFPCLPLSMPRVLDSIWF*NLGRCP Trigger: TGGACATCTGCCCAGGTTCCAGAACCAGATGCTATC...CAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCCCTTCTCGGTCGGGATaGCCACAAGGTACTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSPSRSG*PQGTVA Trigger: TGCTACAGTACCTTGTGGCCATCCCGACCGAGAAGG...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | CAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTaGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFQDVAIRPKSL*RATLLLGSPLG Trigger: ACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAAGGTCATGGCCTTCCTGAGCAGGGAAGGCTCAAAGTGCTGACAGTGTTGGGACCATTCTCTTaGAGCAGGCAGCTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGQGHGLPEQGRLKVLTVLGPFS*SRQLSE Trigger: TTCTGACAGCTGCCTGCTCCAAGAGAATGGTCCCAA...CACTGTCAGCACTTTGAGCCTTCCCTGCTCAGGAAGGCCATGACCTTGCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGAGCATGGTGGCAATGCTCACCAGGCTTCGTTCCCACAGTGTACACATGCCTCCTCGGTGTTTTTaGCCTGCAGTTTCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSMVAMLTRLRSHSVHMPPRCF*PAVSGR Trigger: CCGTCCTGAAACTGCAGGCCAAAAACACCGAGGAGG...CATGTGTACACTGTGGGAACGAAGCCTGGTGAGCATTGCCACCATGCTCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR TCA 90 bp | AACTTGAAAACAATTCCAGGATGTGGCCATCAGACCCAAGAGCCTCTTGAGGGCAGAAGGCTGCTGGTCTaGAGTGCTCTGTGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLKTIPGCGHQTQEPLEGRRLLV*SALCRA Trigger: GGCCCTGCACAGAGCACTTCAGACCAGCAGCCTTCT...GCCCTCAAGAGGCTCTTGGGTCTGATGGCCACATCCTGGAATTGTTTTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCTGTGGCTCAGCCTTTTaGACAACTCCTTCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSCGSAF*TTPSEH Trigger: GTGCTCTGAAGGAGTTGTGCAAAAGGCTGAGCCACA...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCCCGGTTTCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACCCAGAGAGCGACAATaGGGTGAGTGTCCATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ARARFPCLPLSMPRVLLLPRERQ*GECPFI Trigger: AATGAATGGACACTCACCCCATTGTCGCTCTCTGGG...TAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCTTCCTGCGGATCTTATaGCCTGAGTGTTGGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSFLRIL*PECWTS Trigger: CGAAGTCCAACACTCAGGCCATAAGATCCGCAGGAA...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTCATGAGGCCCCGGAATaGGTTGGACAGCCCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLHAQSPAFTGCVCHEAPE*VGQPHL Trigger: CAAATGGGGCTGTCCAACCCATTCCGGGGCCTCATG...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | GTGGCCACAGAACCCAGCCTCACAATGACAGGCCATTaGGCACATGACACTTGCACTCTTGGCAGTATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VATEPSLTMTGH*AHDTCTLGSMC Trigger: GCACATACTGCCAAGAGTGCAAGTGTCATGTGCCAAATGGCCTGTCATTGTGAGGCTGGGTTCTGTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | TGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTaGGGGCAAATTCTCCTCTCTCTGCAGCCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CETKGGEALQAA*GQILLSLQPKD Trigger: ATCCTTGGGCTGCAGAGAGAGGAGAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | TTAATCCGTGAGTGTAGGTGCCAGGGCCCGGTTTCCTaGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIRECRCQGPVS*FASLHAQSPAF Trigger: AAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGAAACCGGGCCCTGGCACCTACACTCACGGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR TCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCGGCAGAGCCTTCTGGTaGGTGTGCTTCTTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSGRAFW*VCFFLL Trigger: CAAAAGGAAGAAGCACACTCACCAGAAGGCTCTGCC...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCGACACATGCTGTTTCTaGAGAGCCTTCACGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSDTCCF*RAFTDP Trigger: GGGATCCGTGAAGGCTCTGCAGAAACAGCATGTGTC...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAGCATGGTGGCAATGCTCACCAGGCTTCGTTCCCACAGTGTACACATGTCAGATCCCTCAAAGTaGAGGTGTGTGCTGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSMVAMLTRLRSHSVHMSDPSK*RCVLVA Trigger: AGCTACCAGCACACACCTGCACTTTGAGGGATCTGA...CATGTGTACACTGTGGGAACGAAGCCTGGTGAGCATTGCCACCATGCTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCGTCCCAGAGGATTTGTaGGCAGGAAAGAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRALKARKRSPGCCLFLSVPEDL*AGKSSS Trigger: TGAAGAGCTCTTTCCTGCCCACAAATCCTCTGGGAC...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | GTGCAGATAGAGATACACTGGGTGGTTCTGGGGGCTTaGGTGTTTCAACCACTGGTGAGCGCTGTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQIEIHWVVLGA*VFQPLVSAVFH Trigger: ATGGAAGACAGCGCTCACCAGTGGTTGAAACACCAAAGCCCCCAGAACCACCCAGTGTATCTCTATCTGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| 3UTR CAA 72 bp | TGGGCATTTCCACAGGCCTGTGAGGGCACACATGCTTaGTCTAATGCCCCCAAGGAACAGCTCTTTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAFPQACEGTHA*SNAPKEQLFLG Trigger: ACCAAGAAAGAGCTGTTCCTTGGGGGCATTAGACAAAGCATGTGTGCCCTCACAGGCCTGTGGAAATGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAATTCTCCTCTCTCTGCAGCCCAAGGATGGCACCTCTCCACAGATGGAGCAGAGCGACAATGGGGTaGGTGTCCATTCATTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKFSSLCSPRMAPLHRWSRATMG*VSIHLR Trigger: TCTTAAATGAATGGACACTCACCCCATTGTCGCTCT...GCTCCATCTGTGGAGAGGTGCCATCCTTGGGCTGCAGAGAGAGGAGAATTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCAAGGATGTTAGTCCTTaGAGGAAGCTCAGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRALKARKRSPGCCLFLSKDVSP*RKLRRN Trigger: GTTCCTCCTGAGCTTCCTGCAAGGACTAACATCCTT...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCTCCAGTCCAACTGCATaGCCTGGGCACCCGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLSSPTA*PGHPQA Trigger: AGCCTGCGGGTGCCCAGGGCATGCAGTTGGACTGGA...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCGACCCAGGTCCGGTCTaGATACAGATACAAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSDPGPV*IQIQKG Trigger: TCCCTTTTGTATCTGTATGCAGACCGGACCTGGGTC...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCTGCATGCGTTCCACATaGTCATACAGAGAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSCMRST*SYREAF Trigger: GAACGCCTCTCTGTATGAGCATGTGGAACGCATGCA...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCCTGAGTCATAGGACATaGGTTCCTCAGAATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCLSHRT*VPQNGL Trigger: CAGACCATTCTGAGGAACCCATGTCCTATGACTCAG...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGATCTGGTTCTGGAACCTaGGCAGATGTCCAGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSSSSPFALSPENLPQRSGSGT*ADVQSN Trigger: GTTGGACTGGACATCTGCCCAGGTTCCAGAACCAGA...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTCAGGTGCTCCAAATCTaGGACAATGTGTCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLHAQSPAFTGCVCQVLQI*DNVSVG Trigger: ACCCACAGACACATTGTCTCAGATTTGGAGCACCTG...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGACATCGGTGTTTGCCATaGCCAGATCTGAGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSSSSPFALSPENLPQRHRCLP*PDLSHR Trigger: CCTATGACTCAGATCTGGGCATGGCAAACACCGATG...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCTTCCTCAGAATGGTCTaGACTCTTGGGACCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSFLRMV*TLGTIL Trigger: GAGAATGGTCCCAAGAGTCCAGACCATTCTGAGGAA...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTCCCTCTGCAATCTGCTaGAGGTCAGCAACACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLHAQSPAFTGCVCPSAIC*RSATLN Trigger: ATTCAGTGTTGCTGACCTCCAGCAGATTGCAGAGGG...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTTTGCCTCTCTCCATGCCCAGAGTCCTGCTTTTACAGGGTGTGTGTGTTGCATTCAGCACACCTaGCTGTGGTGTCAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLHAQSPAFTGCVCCIQHT*LWCQTQ Trigger: TTGAGTTTGACACCACAGTCAGGTGTGCTGAATGCA...ACACACACACCCTGTAAAAGCAGGACTCTGGGCATGGAGAGAGGCAAACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | CCCCATTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCCAGAAATCCAGCTCTTaGCTTTTCTTGCAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PHLPSVHHTEVFMVLCHPQKSSS*LFLQRP Trigger: AGGTCTCTGCAAGAAAAGGCAAGAGCTGGATTTCTG...GGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAATGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| CDS-3UTR CCA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCACACAGAAGTTTTTATaGTCTTGTGTCACCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSTQKFL*SCVTPG Trigger: TCCAGGGGTGACACAAGACCATAAAAACTTCTGTGT...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCGGGGCATCCTCAGCCTaGTCTGGGTACTGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLGASSA*SGYWIF Trigger: GAATATCCAGTACCCAGACCAGGCTGAGGATGCCCC...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | CCCCATTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCCTGAGTCATAGGACATaGGTTCCTCAGAATGGTCTN | + |
|
Preference number: 4 (lower is better) Translates to: PHLPSVHHTEVFMVLCHPLSHRT*VPQNGL Trigger: NAGACCATTCTGAGGAACCCATGTCCTATGACTCAG...GGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAATGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGTGAGACTAAGGGTGGTGAAGCTCTGCAGGCAGCTTTGGGGCAAATTCAACACTGAATCTGTGTaGAGACTCCAGGAGATAATT | + |
|
Preference number: 4 (lower is better) Translates to: GFVRLRVVKLCRQLWGKFNTESV*RLQEII Trigger: AATTATCTCCTGGAGTCTCCACACAGATTCAGTGTT...GAATTTGCCCCAAAGCTGCCTGCAGAGCTTCACCACCCTTAGTCTCACAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCGAGACAATGTGTCTGTaGGTGATGGCTTTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLETMCL*VMAFRR Trigger: CCTTCTGAAAGCCATCACCCACAGACACATTGTCTC...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCCCCATTTGCCTTCGGTaGACCACACAGAAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLPICLR*TTQKFL Trigger: TAAAAACTTCTGTGTGGTGCACCGAAGGCAAATGGG...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | CACCTGCGCCCGCAGCCTACATTCCCTCACTTACCTCTTCTCCCTCGCTGCTTGGTGTGCTTCTTCCTTTaGCCGCCAGCCTCGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HLRPQPTFPHLPLLPRCLVCFFL*PPASAR Trigger: CCGCGCCGAGGCTGGCGGCAAAAGGAAGAAGCACAC...CAAGCAGCGAGGGAGAAGAGGTAAGTGAGGGAATGTAGGCTGCGGGCGCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS CCA 90 bp | GGTCCGACTCTGCCATACTCCAGGGCCTTCCAAGGGCCACTCCCTTaGCCAGCTGCTCCACCCACAGGACTAGAAGGCTGCTGGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPTLPYSRAFQGPLP*PAAPPTGLEGCWSE Trigger: TTCAGACCAGCAGCCTTCTAGTCCTGTGGGTGGAGCAGCTGGCCAAGGGAGTGGCCCTTGGAAGGCCCTGGAGTATGGCAGAGTCGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAAGGTCATGGCCTTCCTGAGCAGGGAAGGCTCAAAGTGCTGACAGTGGTCCTCAGCCTCGTCTaGGGAGGAGGCACGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGQGHGLPEQGRLKVLTVVLSLV*GGGTES Trigger: GCTCTCCGTGCCTCCTCCCAAGACGAGGCTGAGGAC...CACTGTCAGCACTTTGAGCCTTCCCTGCTCAGGAAGGCCATGACCTTGCCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACCGTGGAGAGCAGCCCTaGACTCTGGAGTGTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPALMLAAQTLGGLHLLDRGEQP*TLECLA Trigger: TGCAAGACACTCCAGAGTCAAGGGCTGCTCTCCACG...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS GCA 90 bp | CGTGGAGAGCAGCCCTTGACTCTGGAGTGTCTTGCACAGGAGATGTaGAGAGACCTGCAGCGCTCTTTAGAGCAGGCTCCTGGGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGEQPLTLECLAQEM*RDLQRSLEQAPGEV Trigger: GACCTCCCCAGGAGCCTGCTCTAAAGAGCGCTGCAGGTCTCTGCACATCTCCTGTGCAAGACACTCCAGAGTCAAGGGCTGCTCTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCCCAAGGGCCACTCCCTaGGCCAGCTGCTCCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSPRATP*ASCSTH Trigger: GTGGGTGGAGCAGCTGGCCAAGGGAGTGGCCCTTGG...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGCTCTTATGCTCGCAGCCCAGACACTGGGAGGGCTCCATCTCCTAGACGAGGGCACACATGCTTaGTCTAATGCCCCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPALMLAAQTLGGLHLLDEGTHA*SNAPKE Trigger: TTCCTTGGGGGCATTAGACAAAGCATGTGTGCCCTC...GTCTAGGAGATGGAGCCCTCCCAGTGTCTGGGCTGCGAGCATAAGAGCTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGCGCTCAAGGCCAGGAAACGAAGCCCTGGATGTTGTCTTTTTCTGTCCTTCTGTTCCTGGTACTaGCGCCGGCGGGCACATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRALKARKRSPGCCLFLSFCSWY*RRRAHR Trigger: CCGATGTGCCCGCCGGCGCAAGTACCAGGAACAGAA...GGACAGAAAAAGACAACATCCAGGGCTTCGTTTCCTGGCCTTGAGCGCCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS TCA 90 bp | GCAGTGCCTAGCTGCTTCTCGTCTGGGGTCTCCTGGGGCAGTAGCTaGTGCTTATGGCCACCACTTGATGTCCCAGAGGATTTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVPSCFSSGVSWGSS*CLWPPLDVPEDLWA Trigger: TGCCCACAAATCCTCTGGGACATCAAGTGGTGGCCATAAGCATCAGCTACTGCCCCAGGAGACCCCAGACGAGAAGCAGCTAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS CCA 90 bp | TCTTCAGATCCCTCAAAGTGCAGGTGTGTGCTGGTAGCTAGGCTATaGAGGGAGAGGGGCGTCTGGAACATGGGGGTGTCTGGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDPSKCRCVLVARL*RERGVWNMGVSGSW Trigger: CCAAGAGCCAGACACCCCCATGTTCCAGACGCCCCTCTCCCTCCATAGCCTAGCTACCAGCACACACCTGCACTTTGAGGGATCTGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | AGACAGGTTCTGGAATACCCTCATGTGACAGGCCCACAGGGGACAGACTCTTGCTTCACCAGCTGCAGGTaGATGAGAGGTTGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQVLEYPHVTGPQGTDSCFTSCR*MRGWAR Trigger: CCGGGCCCAACCTCTCATCAACCTGCAGCTGGTGAA...GCAAGAGTCTGTCCCCTGTGGGCCTGTCACATGAGGGTATTCCAGAACCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | AGCCTCTTGAGGGCAACCCTACTCCTGGGAAGCCCTTTGGGTGCTGCAGTGTCCGCTTATGGCCACCACTaGATGTCCCAGAGGATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLRATLLLGSPLGAAVSAYGHH*MSQRIC Trigger: ACAAATCCTCTGGGACATCAAGTGGTGGCCATAAGC...GGACACTGCAGCACCCAAAGGGCTTCCCAGGAGTAGGGTTGCCCTCAAGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | CTCAGGAGCATGGTGGCAATGCTCACCAGGCTTCGTTCCCACAGTGTACACATGGCCTCCTCGGTGTTTTaGGCCTGCAGTTTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LRSMVAMLTRLRSHSVHMASSVF*ACSFRT Trigger: CGTCCTGAAACTGCAGGCCAAAAACACCGAGGAGGC...CATGTGTACACTGTGGGAACGAAGCCTGGTGAGCATTGCCACCATGCTCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGACTTGGGACCATTCTCTaGGAGCAGGCAGCTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKSSSSPFALSPENLPQRLGTIL*EQAAVR Trigger: TCTGACAGCTGCCTGCTCCAAGAGAATGGTCCCAAG...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGGGCTTTGAGGAACCCTTCATATACCCCCTCTGCAATCTGCTGGAGGTCAAGCTCTTGCCTTTTCTaGCAGAGACCTGTCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IRALRNPSYTPSAICWRSSSCLF*QRPVGV Trigger: GACCCCGACAGGTCTCTGCAAGAAAAGGCAAGAGCT...TGACCTCCAGCAGATTGCAGAGGGGGTATATGAAGGGTTCCTCAAAGCCCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGAGATGTCCCAGAGGATTaGTGGGCAGGAAAGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKSSSSPFALSPENLPQRDVPED*WAGKSS Trigger: AGAGCTCTTTCCTGCCCACAAATCCTCTGGGACATC...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
||
| CDS-3UTR CAA 90 bp | GCACATGACACTTGCACTCTTGGCAGTATGTGCCAGAAAGGGCAGAGGCAAAGCTCAGAAATCCAGCTCTaGCCTTTCGGACTCGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: AHDTCTLGSMCQKGQRQSSEIQL*PFGLVG Trigger: TCCTACGAGTCCGAAAGGCAAGAGCTGGATTTCTGA...GCTTTGCCTCTGCCCTTTCTGGCACATACTGCCAAGAGTGCAAGTGTCATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS-3UTR CAA 90 bp | TCCAAATCCAGTTCCTCTCCCTTTGCTCTGAGCCCTGAGAACCTGCCTCAAAGAGAAGTTTTTATGGTCTaGTGTCACCCCTGGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SKSSSSPFALSPENLPQREVFMV*CHPWSW Trigger: CCAGCTCCAGGGGTGACACAAGACCATAAAAACTTC...TCTTTGAGGCAGGTTCTCAGGGCTCAGAGCAAAGGGAGAGGAACTGGATTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS-3UTR CAA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCCGGCCTACATCTGTGTaGATGAAGACCAGGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLRPTSV*MKTRCS Trigger: GGAGCACCTGGTCTTCATCAACACAGATGTAGGCCG...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS-3UTR CAA 90 bp | TTTGCCTTCGGTGCACCACACAGAAGTTTTTATGGTCTTGTGTCACCCCTGGAGTCAGAAATCCAGCTCTaGCCTTTTCTTGCAGAGACC | + |
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Preference number: 5 (lower is better) Translates to: FAFGAPHRSFYGLVSPLESEIQL*PFLAET Trigger: GGTCTCTGCAAGAAAAGGCAAGAGCTGGATTTCTGA...CTCCAGGGGTGACACAAGACCATAAAAACTTCTGTGTGGTGCACCGAAGGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCCTACTCCTATGTTTTATTGCACAATTCAAGCTTCAGGTGACTCAGCTCGCTCTTTCTTGGTCCTaGAGAAAAAGGCCCGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: AFLLLCFIAQFKLQVTQLALSWS*RKRPVE Trigger: CTCCACGGGCCTTTTTCTCAAGGACCAAGAAAGAGC...GAGCTGAGTCACCTGAAGCTTGAATTGTGCAATAAAACATAGGAGTAGGAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS GCA 72 bp | GGTCTGAAGTGCTCTGTGCAGGGCCAGCTTGGGCAGTaGCTAGCTGCTTCTCGTCTGGGGTCTCCTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GLKCSVQGQLGQ*LAASRLGSPGA Trigger: TGCCCCAGGAGACCCCAGACGAGAAGCAGCTAGGCACTGCCCAAGCTGGCCCTGCACAGAGCACTTCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CCA 72 bp | GTGCTGGTAGCTAGGCTATGGAGGGAGAGGGGCGTCTaGAACATGGGGGTGTCTGGCTCTTGGTTTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VLVARLWRERGV*NMGVSGSWFGP Trigger: CGGACCAAACCAAGAGCCAGACACCCCCATGTTCCAGACGCCCCTCTCCCTCCATAGCCTAGCTACCAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CCA 72 bp | CCCTCAAAGTGCAGGTGTGTGCTGGTAGCTAGGCTATaGAGGGAGAGGGGCGTCTGGAACATGGGGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSKCRCVLVARL*RERGVWNMGVS Trigger: AGACACCCCCATGTTCCAGACGCCCCTCTCCCTCCATAGCCTAGCTACCAGCACACACCTGCACTTTGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CCA 72 bp | ATGGAGGGAGAGGGGCGTCTGGAACATGGGGGTGTCTaGCTCTTGGTTTGGTCCGCTGCTTGGTGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: MEGEGRLEHGGV*LLVWSAAWCRI Trigger: AATTCTGCACCAAGCAGCGGACCAAACCAAGAGCCAGACACCCCCATGTTCCAGACGCCCCTCTCCCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS TCA 72 bp | AGCTGCTTCTCGTCTGGGGTCTCCTGGGGCAGTAGCTaGTGCTTATGGCCACCACTTGATGTCCCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SCFSSGVSWGSS*CLWPPLDVPED Trigger: ATCCTCTGGGACATCAAGTGGTGGCCATAAGCATCAGCTACTGCCCCAGGAGACCCCAGACGAGAAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CAA 90 bp | CGTCTGGGGTCTCCTGGGGCAGTAGCTGATGCTTATGGCCACCACTaGATGTCCCAGAGGATTTGTGGGCAGGAAAGAGCTCTTCAGATC | + |
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Preference number: 6 (lower is better) Translates to: RLGSPGAVADAYGHH*MSQRICGQERALQI Trigger: GATCTGAAGAGCTCTTTCCTGCCCACAAATCCTCTGGGACATCAAGTGGTGGCCATAAGCATCAGCTACTGCCCCAGGAGACCCCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS GCA 72 bp | AAGCAGGGCTGTGGGCTGATAGTACTCGCACAACCGTaGAGGTTCCTGCAGGAGCAGTTTCAGATAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: KQGCGLIVLAQP*RFLQEQFQIAL Trigger: GAGTGCTATCTGAAACTGCTCCTGCAGGAACCTGCACGGTTGTGCGAGTACTATCAGCCCACAGCCCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CAA 72 bp | TCTCCTGGGGCAGTAGCTGATGCTTATGGCCACCACTaGATGTCCCAGAGGATTTGTGGGCAGGAAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPGAVADAYGHH*MSQRICGQERA Trigger: AGCTCTTTCCTGCCCACAAATCCTCTGGGACATCAAGTGGTGGCCATAAGCATCAGCTACTGCCCCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CAA 72 bp | GGAGGTCGGCAGAAGTCATCTTCAGAAATCCAGCTCTaGCCTTTTCTTGCAGAGACCTGTCGGGGTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: GGRQKSSSEIQL*PFLAETCRGHR Trigger: CCGATGACCCCGACAGGTCTCTGCAAGAAAAGGCAAGAGCTGGATTTCTGAAGATGACTTCTGCCGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184350.2 |
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| CDS CAA 72 bp | GGAGGTCGGCAGAAGTCATCTTCAGAAATCCAGCTCTaGCCTTTCGGACTCGTAGGAGAGGAAACCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: GGRQKSSSEIQL*PFGLVGEETTS Trigger: GCTTGTGGTTTCCTCTCCTACGAGTCCGAAAGGCAAGAGCTGGATTTCTGAAGATGACTTCTGCCGACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS GCA 72 bp | CGGCAACGGCCTACATCTGTGTTGATGAAGACCAGGTaGTCCAAATCTGAGACAATGTGTCTGTGGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RQRPTSVLMKTR*SKSETMCLWVM Trigger: CATCACCCACAGACACATTGTCTCAGATTTGGAGCACCTGGTCTTCATCAACACAGATGTAGGCCGTTGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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| CDS CCA 72 bp | TGCTTATGGCCACCACTTGATGTCCCAGAGGATTTGTaGGCAGGAAAGAGCTCTTCAGATCCCTCAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: CLWPPLDVPEDL*AGKSSSDPSKC Trigger: GCACTTTGAGGGATCTGAAGAGCTCTTTCCTGCCCACAAATCCTCTGGGACATCAAGTGGTGGCCATAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041272.10 |
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