Pregenerated sensors for PLEKHG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038167Ensembl transcript IDs: ENSMUST00000042647.7
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTaGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGCACTCT | + |
Preference number: 1 (lower is better) Translates to: SRVLRGDAWVRLGLR*ILEVESGGGGGQHS Trigger: AGAGTGCTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCGGGGCGCTTCGCCGCTaGGGAGCTTGGGGGTCGGGA | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWIGALRR*GAWGSG Trigger: TCCCGACCCCCAAGCTCCCCAGCGGCGAAGCGCCCC...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCGTGTGGAGGGCCTGGTaGTGGGGGACTCCGTGCCCT | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWIVWRAW*WGTPCP Trigger: AGGGCACGGAGTCCCCCAGCACCAGGCCCTCCACAC...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGCACTCTTCTCCGGTCCTCTGGTaGCAGGCGGGGCATCCCAAA | + |
Preference number: 4 (lower is better) Translates to: GLRWILEVESGGGGGQHSSPVLW*QAGHPK Trigger: TTTGGGATGCCCCGCCTGCCACCAGAGGACCGGAGA...AGAGTGCTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | CCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTGTAGTGTCTCCGGTCCTCTaGTGGCAGGCGGGGCATCCC | + |
Preference number: 4 (lower is better) Translates to: PGEVVASTLRETISLGGVVSPVL*WQAGHP Trigger: GGGATGCCCCGCCTGCCACCAGAGGACCGGAGACAC...TACACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTCCCTCGGCACTGCTCTaGGAGTCCTCCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGPSALL*ESSGEG Trigger: GCCTTCCCCGGAGGACTCCCAGAGCAGTGCCGAGGG...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GTCAGGCTTGGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCCAGCAGCAGCTGCCTaGTATACTCAGGGGCAACCC | + |
Preference number: 4 (lower is better) Translates to: VRLGLRWILEVESGGGGGPAAAA*YTQGQP Trigger: GGGTTGCCCCTGAGTATACCAGGCAGCTGCTGCTGG...GCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | GGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGCACTCTTTGAGTTTGGGGGAGTaGGGTGGGCCGACCCCAAAA | + |
Preference number: 4 (lower is better) Translates to: GLRWILEVESGGGGGQHSLSLGE*GGPTPK Trigger: TTTTGGGGTCGGCCCACCTCACTCCCCCAAACTCAA...AGAGTGCTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCCCAGCAGAGTCAGTATaGGTGGGAGAGTGGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWIPAESV*VGEWGS Trigger: GCTCCCCCACTCTCCCACTCATACTGACTCTGCTGG...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | CCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTGTAGCTCGGGGCTTCTCTTaGGCACAGCCTGCAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: PGEVVASTLRETISLGGVARGFS*AQPAAA Trigger: TGCTGCTGCAGGCTGTGCGCAAGAGAAGCCCCGAGC...TACACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GTCAGGCTTGGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCCACAGCCTCGATCATaGCATTCAGGGCCTCTTGGG | + |
Preference number: 4 (lower is better) Translates to: VRLGLRWILEVESGGGGGPQPRS*HSGPLG Trigger: CCCAAGAGGCCCTGAATGCCATGATCGAGGCTGTGG...GCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTTGGAGGGCCTGGTGCTaGGGGACTCCGTGCCCTGGT | + |
Preference number: 4 (lower is better) Translates to: NVQFLTSRVLRGDAWVRLWRAWC*GTPCPG Trigger: ACCAGGGCACGGAGTCCCCCAGCACCAGGCCCTCCA...AAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGGCTTGGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGGCTCCATCGATCCTTTaGTTGGCCAGCTCCTCCCTG | + |
Preference number: 4 (lower is better) Translates to: RLGLRWILEVESGGGGGQAPSIL*LASSSL Trigger: CAGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGC...CTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCCCCCTCATCTTCATCTaGGGACTCCCAGGGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWIPLIFI*GLPGAF Trigger: GAAAGCCCCTGGGAGTCCTCAGATGAAGATGAGGGG...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTTCAGCCTCCGGGGCTTaGCATTCCCTGGTTCCGGTT | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGSASGA*HSLVPV Trigger: AACCGGAACCAGGGAATGGCAAGCCCCGGAGGCTGA...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTCCTTCCAGCAGCAGCTaGCTGGTATACTCAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGPSSSS*LVYSGA Trigger: TGCCCCTGAGTATACCAGGCAGCTGCTGCTGGAAGG...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | CAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGTGCTGGGGGACTCCGTaGCCTGGTTGCGATAGAGGG | + |
Preference number: 4 (lower is better) Translates to: QNVQFLTSRVLRGDAWVRCWGTP*PGCDRG Trigger: CCCTCTATCGCAACCAGGGCACGGAGTCCCCCAGCA...CCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTGAAGCTACCAGGCCTTaGAGGGGGCCCTCATTTGGA | + |
Preference number: 4 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGEATRP*RGPSFG Trigger: TCCAAATGAGGGCCCCCTCCAAGGCCTGGTAGCTTC...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCTCTGGCCAGAGCCCTTaGCAAAGGGGACATAGTGCT | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWISGQSP*QRGHSA Trigger: AGCACTATGTCCCCTTTGCCAAGGGCTCTGGCCAGA...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGGCATTCAGGGCCTCTTaGGCTCGGGGCTCGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: GFVCETKCSVLDLQGPQRAFRAS*ARGSGL Trigger: AAGCCCCGAGCCCCGAGCCCAAGAGGCCCTGAATGC...CCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | AGGCTTGGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGATAGATTCCCAGCAGTaGTGTGGGCAGAGGTCTGAT | + |
Preference number: 4 (lower is better) Translates to: RLGLRWILEVESGGGGGQIDSQQ*CGQRSD Trigger: ATCAGACCTCTGCCCACAGCACTGCTGGGAATCTAT...CTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCTCTTCCAGGATGGGCTaGAGCACCTCCTCCCAAAAT | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWISSRMG*STSSQN Trigger: ATTTTGGGAGGAGGTGCTGCAGCCCATCCTGGAAGA...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTAAGGTTGGCCAGAGGTaGGAGTGTCTTCCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGKVGQR*ECLPGW Trigger: CCATCCTGGAAGACACTCGCACCTCTGGCCAACCTT...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAAAGGTGTGGAGGGCCTaGTGCTGGGGGACTCCGTGC | + |
Preference number: 4 (lower is better) Translates to: RGSSVRQNVQFLTSRVLRKVWRA*CWGTPC Trigger: GCACGGAGTCCCCCAGCACCAGGCCCTCCACACCTT...TCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | AGGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTGCAAGGGGACGTCTCTaGGTTCCAGGGTGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: RAQGFVCETKCSVLDLQGARGRL*VPGWRR Trigger: CCTTCTCCACCCTGGAACTCAGAGACGTCCCCTTGC...ACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | GGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTTCTCCAGCCACCGTaGACGCTCTGTAGAACTGGG | + |
Preference number: 4 (lower is better) Translates to: GLRGSSVRQNVQFLTSRVLLQPP*TLCRTG Trigger: CCCAGTTCTACAGAGCGTGCACGGTGGCTGGAGAAG...GACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTGGTAGATCAGCTCAGTaGTCAGGAGTTCCCACAGTG | + |
Preference number: 4 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGGRSAQ*SGVPTV Trigger: CACTGTGGGAACTCCTGACCACTGAGCTGATCTACC...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTGAGTGTCTTCCAGGATaGGCTGCAGCACCTCCTCCC | + |
Preference number: 4 (lower is better) Translates to: RAQGFVCETKCSVLDLQGECLPG*AAAPPP Trigger: GGGAGGAGGTGCTGCAGCCCATCCTGGAAGACACTC...ACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTACAGGATCCAAAGGTTaGCCAGAGGTGCGAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGTGSKG*PEVRVS Trigger: AGACACTCGCACCTCTGGCCAACCTTTGGATCCTGT...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTCACTGCACGAAGGTGTaGAACAGTGGGTTCGTGTCT | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGHCTKV*NSGFVS Trigger: AGACACGAACCCACTGTTCCACACCTTCGTGCAGTG...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTATCCAGGGTGGAGAATaGACGCAGGTTCTTCTCCAC | + |
Preference number: 4 (lower is better) Translates to: SPGEVVASTLRETISLGGIQGGE*TQVLLH Trigger: GTGGAGAAGAACCTGCGTCCATTCTCCACCCTGGAT...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | AGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAACCGTAGCCAGAGTCTaGGGCGTCATCCGGCATGGA | + |
Preference number: 4 (lower is better) Translates to: RGSSVRQNVQFLTSRVLRTVARV*GVIRHG Trigger: TCCATGCCGGATGACGCCTCAGACTCTGGCTACGGT...TCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | AGGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTGGGACCCTCATTCTCTaGAGCTGGGCTAGAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: RAQGFVCETKCSVLDLQGGTLIL*SWARVS Trigger: GCTGACTCTAGCCCAGCTGCAGAGAATGAGGGTCCC...ACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCTCCATGCCTCTTCTCTaGGTCTGGTTCCCGAAGCAC | + |
Preference number: 4 (lower is better) Translates to: GLRGSSVRQNVQFLTSRVSMPLL*VWFPKH Trigger: GTGCTTCGGGAACCAGACCCAGAGAAGAGGCATGGA...GACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTAGTGCTTCCTGCTGGTaGCAAAGCTGGCGGTTCATC | + |
Preference number: 4 (lower is better) Translates to: NVQFLTSRVLRGDAWVRLSASCW*QSWRFI Trigger: GATGAACCGCCAGCTTTGCCACCAGCAGGAAGCACT...AAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTATTTGGTGATGCGCTaGTGGGGCTTGATGAGCAAG | + |
Preference number: 4 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGYLVMR*WGLMSK Trigger: CTTGCTCATCAAGCCCCACCAGCGCATCACCAAATA...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | CAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGTCACCCTGTCGGACCTaGCCATTTATGTGTCGCAGG | + |
Preference number: 4 (lower is better) Translates to: QNVQFLTSRVLRGDAWVRSPCRT*PFMCRR Trigger: CCTGCGACACATAAATGGCCAGGTCCGACAGGGTGA...CCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGGTTGGGGTCTCGCAGTaGTCGGCACACGAGTTTCTC | + |
Preference number: 4 (lower is better) Translates to: GFVCETKCSVLDLQGPQRVGVSQ*SAHEFL Trigger: GAGAAACTCGTGTGCCGACCACTGCGAGACCCCAAC...CCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCGCATCCCAAACATGCTaGATGTGTGCAGCCTTATTT | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWIASQTC*MCAALF Trigger: AAATAAGGCTGCACACATTCAGCATGTTTGGGATGC...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | AGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGACTGTCCGCCTTGCGTTaGGGTTTGGTTACCAGGAGC | + |
Preference number: 4 (lower is better) Translates to: RGSSVRQNVQFLTSRVLRLSALR*GLVTRS Trigger: GCTCCTGGTAACCAAACCTCAACGCAAGGCGGACAG...TCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | AGGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCTCTTGCGCACAGCCTaGAGCAGCAGTGGGTATTTG | + |
Preference number: 4 (lower is better) Translates to: RAQGFVCETKCSVLDLQGLLRTA*SSSGYL Trigger: CAAATACCCACTGCTGCTGCAGGCTGTGCGCAAGAG...ACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | GGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGGTAGAACTGGGACAGTaGACAGTGAGGGCACTGGAG | + |
Preference number: 4 (lower is better) Translates to: GFVCETKCSVLDLQGPQRVELGQ*TVRALE Trigger: CTCCAGTGCCCTCACTGTGCACTGTCCCAGTTCTAC...CCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR TCA 90 bp | AATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTCACACTGGAATTCTGTaGGGTGGATCAACAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: NVQFLTSRVLRGDAWVRLHTGIL*GGSTGS Trigger: GCTTCCTGTTGATCCACCTCACAGAATTCCAGTGTG...AAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | AGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGAGGGGGCCCTCATTTaGAGGACCAAAGGCTTGCAT | + |
Preference number: 4 (lower is better) Translates to: RGSSVRQNVQFLTSRVLREGALI*RTKGLH Trigger: ATGCAAGCCTTTGGTCCTCCAAATGAGGGCCCCCTC...TCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTTGGTGATGCGCTGGTaGGGCTTGATGAGCAAGTCA | + |
Preference number: 4 (lower is better) Translates to: GFVCETKCSVLDLQGPQRLVMRW*GLMSKS Trigger: TGACTTGCTCATCAAGCCCCACCAGCGCATCACCAA...CCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | GGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGCCTTGCGTTGAGGTTTaGTTACCAGGAGCACATCGG | + |
Preference number: 4 (lower is better) Translates to: GFVCETKCSVLDLQGPQRPCVEV*LPGAHR Trigger: CCGATGTGCTCCTGGTAACCAAACCTCAACGCAAGG...CCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CCA 90 bp | CAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGGCACTGGAGACACACTaGAATTCTGTGAGGTGGATC | + |
Preference number: 4 (lower is better) Translates to: QNVQFLTSRVLRGDAWVRALETH*NSVRWI Trigger: GATCCACCTCACAGAATTCCAGTGTGTCTCCAGTGC...CCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR GCA 90 bp | ACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTTGAGGTGGATCAACATGCTGAATGTGTaGAGCCTTATTTCTAGCTCA | + |
Preference number: 4 (lower is better) Translates to: TSRVLRGDAWVRLGLRWINMLNV*SLISSS Trigger: TGAGCTAGAAATAAGGCTGCACACATTCAGCATGTT...GATCCACCTCAAACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | CGCAGGAAGGACTCCACAGCCTCGATCATGGCATTCAGGGCCTCTTaGGCTCGGGGCTCGGGGCTTCTCTTGCGCACAGCCTGCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: RRKDSTASIMAFRAS*ARGSGLLLRTACSS Trigger: GCTGCTGCAGGCTGTGCGCAAGAGAAGCCCCGAGCCCCGAGCCCAAGAGGCCCTGAATGCCATGATCGAGGCTGTGGAGTCCTTCCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | AATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTTCGCCGCTGGGGAGCTaGGGGGTCGGGAGGCTGGGG | + |
Preference number: 5 (lower is better) Translates to: NVQFLTSRVLRGDAWVRLSPLGS*GVGRLG Trigger: CCCCAGCCTCCCGACCCCCAAGCTCCCCAGCGGCGA...AAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CGTCTTCCTCCTCCGACCAGATTGGTGGGGCTCTCCTGGGTAGACTaGCTCCTCTTAGGATCCCTTCTGGCAACTCTGGGGCGCTTCGCC | + |
Preference number: 5 (lower is better) Translates to: RLPPPTRLVGLSWVD*LLLGSLLATLGRFA Trigger: GGCGAAGCGCCCCAGAGTTGCCAGAAGGGATCCTAAGAGGAGGCAGTCTACCCAGGAGAGCCCCACCAATCTGGTCGGAGGAGGAAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | GGCGTGTCCAGCTGTATGATGTGGGGGACCCTCATTCTCTGCAGCTaGGCTAGAGTCAGCCTCCGGGGCTTGCCATTCCCTGGTTCCGGT | + |
Preference number: 5 (lower is better) Translates to: GVSSCMMWGTLILCS*ARVSLRGLPFPGSG Trigger: ACCGGAACCAGGGAATGGCAAGCCCCGGAGGCTGACTCTAGCCCAGCTGCAGAGAATGAGGGTCCCCCACATCATACAGCTGGACACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GTCAGGCTTGGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCGGAGGACGGATGACCTaGGCTCTGTCCGCCTTGCGT | + |
Preference number: 5 (lower is better) Translates to: VRLGLRWILEVESGGGGGGGRMT*ALSALR Trigger: ACGCAAGGCGGACAGAGCCAAGGTCATCCGTCCTCC...GCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACCAAGCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | GGCACTATCGCCTCCCTCTCCTATCTCCCAGTGTCTCCGGTCCTCTaGTGGCAGGCGGGGCATCCCAAACATGCTGAATGTGTGCAGCCT | + |
Preference number: 5 (lower is better) Translates to: GTIASLSYLPVSPVL*WQAGHPKHAECVQP Trigger: AGGCTGCACACATTCAGCATGTTTGGGATGCCCCGCCTGCCACCAGAGGACCGGAGACACTGGGAGATAGGAGAGGGAGGCGATAGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | GGCTTGCCATTCCCTGGTTCCGGTTCCGAGGCTCCATCGATCCTTTaGTTGGCCAGCTCCTCCCTGATCTCCCTGAGCATGTCCTCCCGT | + |
Preference number: 5 (lower is better) Translates to: GLPFPGSGSEAPSIL*LASSSLISLSMSSR Trigger: ACGGGAGGACATGCTCAGGGAGATCAGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGCCTCGGAACCGGAACCAGGGAATGGCAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGCACTCTGGCTCCATCGATCCTTaGGTTGGCCAGCTCCTCCCT | + |
Preference number: 5 (lower is better) Translates to: GLRWILEVESGGGGGQHSGSIDP*VGQLLP Trigger: AGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGCC...AGAGTGCTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTGTCAGCCTCCGGGGCTaGCCATTCCCTGGTTCCGGT | + |
Preference number: 5 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGVSLRG*PFPGSG Trigger: ACCGGAACCAGGGAATGGCAAGCCCCGGAGGCTGAC...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CATGCCTCTTCTCTGGGTCTGGTTCCCGAAGCACCAGAGGAGACATaGCTCGGGTCTGGCCAGAGCCCTTGGCAAAGGGGACATAGTGCT | + |
Preference number: 5 (lower is better) Translates to: HASSLGLVPEAPEET*LGSGQSPWQRGHSA Trigger: AGCACTATGTCCCCTTTGCCAAGGGCTCTGGCCAGACCCGAGGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGAAGAGGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | TCTCCACCTCCTCGCTGGAGGGCTCTAGCACCTCATAGGGTCCTATaGGCTGGGCCACAGCCATCAAACTCTCCTGCTCTTCACCCTGTC | + |
Preference number: 5 (lower is better) Translates to: SPPPRWRALAPHRVL*AGPQPSNSPALHPV Trigger: GACAGGGTGAAGAGCAGGAGAGTTTGATGGCTGTGGCCCAGCGCATAGGACCCTATGAGGTGCTAGAGCCCTCCAGCGAGGAGGTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | AGGTGGGCCGACCCCAAAATAGCTTCCATGCCTCTTCTCTGGGTCTaGTTCCCGAAGCACCAGAGGAGACATGCCTCGGGTCTGGCCAGA | + |
Preference number: 5 (lower is better) Translates to: RWADPKIASMPLLWV*FPKHQRRHASGLAR Trigger: TCTGGCCAGACCCGAGGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGAAGAGGCATGGAAGCTATTTTGGGGTCGGCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | GGAGTGAGGTGGGCCGACCCCAAAATAGCTTCCATGCCTCTTCTCTaGGTCTGGTTCCCGAAGCACCAGAGGAGACATGCCTCGGGTCTG | + |
Preference number: 5 (lower is better) Translates to: GVRWADPKIASMPLL*VWFPKHQRRHASGL Trigger: CAGACCCGAGGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGAAGAGGCATGGAAGCTATTTTGGGGTCGGCCCACCTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTGGAAGCTACCAGGCCTaGGAGGGGGCCCTCATTTGG | + |
Preference number: 5 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGGSYQA*EGALIW Trigger: CCAAATGAGGGCCCCCTCCAAGGCCTGGTAGCTTCC...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GGTTTGAGGTGGATCCTTGAGGTAGAGTCCGGGGGAGGTGGTGGCCAGCACTCTCCATCGATCCTTTGGTaGGCCAGCTCCTCCCTGATC | + |
Preference number: 5 (lower is better) Translates to: GLRWILEVESGGGGGQHSPSILW*ASSSLI Trigger: GATCAGGGAGGAGCTGGCCAACCAAAGGATCGATGG...AGAGTGCTGGCCACCACCTCCCCCGGACTCTACCTCAAGGATCCACCTCAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 90 bp | AGGGCGTGTCTTCATCTGTATCCTCAGTCACCACCAGGCGGGGGATaGTGGCGAACTCTAAAGTCCTCCCCTCGGCACTGCTCTGGGAGT | + |
Preference number: 5 (lower is better) Translates to: RACLHLYPQSPPGGG*WRTLKSSPRHCSGS Trigger: ACTCCCAGAGCAGTGCCGAGGGGAGGACTTTAGAGTTCGCCATCATCCCCCGCCTGGTGGTGACTGAGGATACAGATGAAGACACGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | TCACCCAGCGTCTGTCTTCCGGAGCGCTTGTGTTTCTCACACCACTaGACGAAGGTGTGGAACAGTGGGTTCGTGTCTTGCTGCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: SPSVCLPERLCFSHH*TKVWNSGFVSCCSR Trigger: GCGGGAGCAGCAAGACACGAACCCACTGTTCCACACCTTCGTGCAGTGGTGTGAGAAACACAAGCGCTCCGGAAGACAGACGCTGGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CCTTCTCGTCCCTCCTTCACCCGCACAGGTCCTTCCAGCAGCAGCTaGCTGGTATACTCAGGGGCAACCCCTAGTACAGGAGTCATCAGA | + |
Preference number: 5 (lower is better) Translates to: PSRPSFTRTGPSSSS*LVYSGATPSTGVIR Trigger: TCTGATGACTCCTGTACTAGGGGTTGCCCCTGAGTATACCAGGCAGCTGCTGCTGGAAGGACCTGTGCGGGTGAAGGAGGGACGAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CTTCTGCAGAGTGGTCTGAGCATGCTGGGTCTTCTCCAGCCACCGTaGACGCTCTGTAGAACTGGGACAGTGCACAGTGAGGGCACTGGA | + |
Preference number: 5 (lower is better) Translates to: LLQSGLSMLGLLQPP*TLCRTGTVHSEGTG Trigger: TCCAGTGCCCTCACTGTGCACTGTCCCAGTTCTACAGAGCGTGCACGGTGGCTGGAGAAGACCCAGCATGCTCAGACCACTCTGCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | CCAAAGTCTCGTCTTCCTCCTCCGACCAGATTGGTGGGGCTCTCCTaGGTAGACTGCCTCCTCTTAGGATCCCTTCTGGCAACTCTGGGG | + |
Preference number: 5 (lower is better) Translates to: PKSRLPPPTRLVGLS*VDCLLLGSLLATLG Trigger: CCCCAGAGTTGCCAGAAGGGATCCTAAGAGGAGGCAGTCTACCCAGGAGAGCCCCACCAATCTGGTCGGAGGAGGAAGACGAGACTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTATGCGCTGGTGGGGCTaGATGAGCAAGTCACCCAGC | + |
Preference number: 5 (lower is better) Translates to: SPGEVVASTLRETISLGGMRWWG*MSKSPS Trigger: GCTGGGTGACTTGCTCATCAAGCCCCACCAGCGCAT...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CCAAACAGGGTCTCAGCCGACACCTCAGTCAGCAGCCCCACCCGCTaGAAATTCAGCAGACCAGCTGCCAGGAGATCAGTCATGATCTTG | + |
Preference number: 5 (lower is better) Translates to: PNRVSADTSVSSPTR*KFSRPAARRSVMIL Trigger: CAAGATCATGACTGATCTCCTGGCAGCTGGTCTGCTGAATTTGCAGCGGGTGGGGCTGCTGACTGAGGTGTCGGCTGAGACCCTGTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | GGATCCAAAGGTTGGCCAGAGGTGCGAGTGTCTTCCAGGATGGGCTaGAGCACCTCCTCCCAAAATCTCCGGTGGGCTCTAATCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: GSKGWPEVRVSSRMG*STSSQNLRWALIRL Trigger: CAACCTGATTAGAGCCCACCGGAGATTTTGGGAGGAGGTGCTGCAGCCCATCCTGGAAGACACTCGCACCTCTGGCCAACCTTTGGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | TGGGTCTTCTCCAGCCACCGTGCACGCTCTGTAGAACTGGGACAGTaGACAGTGAGGGCACTGGAGACACACTGGAATTCTGTGAGGTGG | + |
Preference number: 5 (lower is better) Translates to: WVFSSHRARSVELGQ*TVRALETHWNSVRW Trigger: CCACCTCACAGAATTCCAGTGTGTCTCCAGTGCCCTCACTGTGCACTGTCCCAGTTCTACAGAGCGTGCACGGTGGCTGGAGAAGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | ACTATCGCCTCCCTCTCCTATCTCCCAGTGTCTCCGGTCCTCTGGTaGCAGGCGGGGCATCCCAAACATGCTGAATGTGTGCAGCCTTAT | + |
Preference number: 5 (lower is better) Translates to: TIASLSYLPVSPVLW*QAGHPKHAECVQPY Trigger: ATAAGGCTGCACACATTCAGCATGTTTGGGATGCCCCGCCTGCCACCAGAGGACCGGAGACACTGGGAGATAGGAGAGGGAGGCGATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | CAGTGCACAGTGAGGGCACTGGAGACACACTGGAATTCTGTGAGGTaGATCAACAGGAAGCTGTTGGGGTCTCGCAGTGGTCGGCACACG | + |
Preference number: 5 (lower is better) Translates to: QCTVRALETHWNSVR*INRKLLGSRSGRHT Trigger: CGTGTGCCGACCACTGCGAGACCCCAACAGCTTCCTGTTGATCCACCTCACAGAATTCCAGTGTGTCTCCAGTGCCCTCACTGTGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | TTGGAATCAAGGTACCGTAGCCAGAGTCTGAGGCGTCATCCGGCATaGAGGGCGTGTCTTCATCTGTATCCTCAGTCACCACCAGGCGGG | + |
Preference number: 5 (lower is better) Translates to: LESRYRSQSLRRHPA*RACLHLYPQSPPGG Trigger: CCCGCCTGGTGGTGACTGAGGATACAGATGAAGACACGCCCTCCATGCCGGATGACGCCTCAGACTCTGGCTACGGTACCTTGATTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | CAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCCTCCTCCGACCAGATaGGTGGGGCTCTCCTGGGTA | + |
Preference number: 5 (lower is better) Translates to: QNVQFLTSRVLRGDAWVRPPPTR*VGLSWV Trigger: TACCCAGGAGAGCCCCACCAATCTGGTCGGAGGAGG...CCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | TGGGCCACAGCCATCAAACTCTCCTGCTCTTCACCCTGTCGGACCTaGCCATTTATGTGTCGCAGGAAGGACTCCACAGCCTCGATCATG | + |
Preference number: 5 (lower is better) Translates to: WATAIKLSCSSPCRT*PFMCRRKDSTASIM Trigger: CATGATCGAGGCTGTGGAGTCCTTCCTGCGACACATAAATGGCCAGGTCCGACAGGGTGAAGAGCAGGAGAGTTTGATGGCTGTGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | GTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGCTTGGTTCTGTCCGCCTTGCGTaGAGGTTTGGTTACCAGGAG | + |
Preference number: 5 (lower is better) Translates to: VQFLTSRVLRGDAWVRLGSVRLA*RFGYQE Trigger: CTCCTGGTAACCAAACCTCAACGCAAGGCGGACAGA...ACCAAGCCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 90 bp | AGAATCCTTCGGGGAGCTTGGAATCAAGGTACCGTAGCCAGAGTCTaGGGCGTCATCCGGCATGGAGGGCGTGTCTTCATCTGTATCCTC | + |
Preference number: 5 (lower is better) Translates to: RILRGAWNQGTVARV*GVIRHGGRVFICIL Trigger: GAGGATACAGATGAAGACACGCCCTCCATGCCGGATGACGCCTCAGACTCTGGCTACGGTACCTTGATTCCAAGCTCCCCGAAGGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | TCATCTCCTTGTGTTCCAGCACCAGCTCCTTCCAGGACTTTTCCATaGTCAGGGCACTATCGCCTCCCTCTCCTATCTCCCAGTGTCTCC | + |
Preference number: 5 (lower is better) Translates to: SSPCVPAPAPSRTFP*SGHYRLPLLSPSVS Trigger: GGAGACACTGGGAGATAGGAGAGGGAGGCGATAGTGCCCTGACCATGGAAAAGTCCTGGAAGGAGCTGGTGCTGGAACACAAGGAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 90 bp | AGCATGAGGGGAGGACGGATGACCTTGGCTCTGTCCGCCTTGCGTTaGGGTTTGGTTACCAGGAGCACATCGGAGAAGAGAAATAGGTAC | + |
Preference number: 5 (lower is better) Translates to: SMRGGRMTLALSALR*GLVTRSTSEKRNRY Trigger: GTACCTATTTCTCTTCTCCGATGTGCTCCTGGTAACCAAACCTCAACGCAAGGCGGACAGAGCCAAGGTCATCCGTCCTCCCCTCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | GAGCTTTCTCAGGTAGATCAGCTCAGTGGTCAGGAGTTCCCACAGTaGTTCCTGCTGGTGGCAAAGCTGGCGGTTCATCTCCTTGTGTTC | + |
Preference number: 5 (lower is better) Translates to: ELSQVDQLSGQEFPQ*FLLVAKLAVHLLVF Trigger: GAACACAAGGAGATGAACCGCCAGCTTTGCCACCAGCAGGAAGCACTGTGGGAACTCCTGACCACTGAGCTGATCTACCTGAGAAAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 90 bp | CACCTCAGTCAGCAGCCCCACCCGCTGCAAATTCAGCAGACCAGCTaGCAGGAGATCAGTCATGATCTTGAGCTTTCTCAGGTAGATCAG | + |
Preference number: 5 (lower is better) Translates to: HLSQQPHPLQIQQTS*QEISHDLELSQVDQ Trigger: CTGATCTACCTGAGAAAGCTCAAGATCATGACTGATCTCCTGGCAGCTGGTCTGCTGAATTTGCAGCGGGTGGGGCTGCTGACTGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | TGTGGAACAGTGGGTTCGTGTCTTGCTGCTCCCGCGCATAAGCCATaGTCTGCTTTACTCGAAGGCAGTACTGGACGTAAGGTTGGAACC | + |
Preference number: 5 (lower is better) Translates to: CGTVGSCLAAPAHKP*SALLEGSTGRKVGT Trigger: GGTTCCAACCTTACGTCCAGTACTGCCTTCGAGTAAAGCAGACCATGGCTTATGCGCGGGAGCAGCAAGACACGAACCCACTGTTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 90 bp | TCTGTAGAACTGGGACAGTGCACAGTGAGGGCACTGGAGACACACTaGAATTCTGTGAGGTGGATCAACAGGAAGCTGTTGGGGTCTCGC | + |
Preference number: 5 (lower is better) Translates to: SVELGQCTVRALETH*NSVRWINRKLLGSR Trigger: GCGAGACCCCAACAGCTTCCTGTTGATCCACCTCACAGAATTCCAGTGTGTCTCCAGTGCCCTCACTGTGCACTGTCCCAGTTCTACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | AGTCCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTTGGGCTCTAATCAGGTaGGGGACATTTCCAAACAGG | + |
Preference number: 5 (lower is better) Translates to: SPGEVVASTLRETISLGGWALIR*GTFPNR Trigger: CCTGTTTGGAAATGTCCCCAACCTGATTAGAGCCCA...ACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | CAAAATGTTCAGTTCTTGACCTCCAGGGTCCTCAGAGGTGATGCCTGGGTCAGGTGTCTTCCGGAGCGCTaGTGTTTCTCACACCACTGC | + |
Preference number: 5 (lower is better) Translates to: QNVQFLTSRVLRGDAWVRCLPER*CFSHHC Trigger: GCAGTGGTGTGAGAAACACAAGCGCTCCGGAAGACA...CCTGACCCAGGCATCACCTCTGAGGACCCTGGAGGTCAAGAACTGAACATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | CCGGGGGAGGTGGTGGCCAGCACTCTTAGGGAGACAATTTCTCTAGGAGGTGTACAGCTCCCTCTTCTGTaGAATGTACTGCTCACCCTT | + |
Preference number: 5 (lower is better) Translates to: PGEVVASTLRETISLGGVQLPLL*NVLLTL Trigger: AAGGGTGAGCAGTACATTCAACAGAAGAGGGAGCTG...TACACCTCCTAGAGAAATTGTCTCCCTAAGAGTGCTGGCCACCACCTCCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 90 bp | AAGGTTGGAACCGCTGGCCAAATGTCAGGAAGCCATTTTGTAAGCTaGCAGGATCCAAAGGTTGGCCAGAGGTGCGAGTGTCTTCCAGGA | + |
Preference number: 5 (lower is better) Translates to: KVGTAGQMSGSHFVS*QDPKVGQRCECLPG Trigger: TCCTGGAAGACACTCGCACCTCTGGCCAACCTTTGGATCCTGTCAGCTTACAAAATGGCTTCCTGACATTTGGCCAGCGGTTCCAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS-3UTR CAA 90 bp | AGGGCTCAGGGGTTCGTCTGTGAGACAAAATGTTCAGTTCTTGACCTCCAGGGTGTACTGGACGTAAGGTaGGAACCGCTGGCCAAATGT | + |
Preference number: 5 (lower is better) Translates to: RAQGFVCETKCSVLDLQGVLDVR*EPLAKC Trigger: ACATTTGGCCAGCGGTTCCAACCTTACGTCCAGTAC...ACCCTGGAGGTCAAGAACTGAACATTTTGTCTCACAGACGAACCCCTGAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | GCGAAGGTGTGGAGGGCCTGGTGCTGGGGGACTCCGTaGCCTGGTTGCGATAGAGGGCCAGCAGCTCCCTCT | + |
Preference number: 6 (lower is better) Translates to: AKVWRAWCWGTP*PGCDRGPAAPS Trigger: AGAGGGAGCTGCTGGCCCTCTATCGCAACCAGGGCACGGAGTCCCCCAGCACCAGGCCCTCCACACCTTCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | TGGGCTCGGGGCTCGGGGCTTCTCTTGCGCACAGCCTaGAGCAGCAGTGGGTATTTGGTGATGCGCTGGTGG | + |
Preference number: 6 (lower is better) Translates to: WARGSGLLLRTA*SSSGYLVMRWW Trigger: CCACCAGCGCATCACCAAATACCCACTGCTGCTGCAGGCTGTGCGCAAGAGAAGCCCCGAGCCCCGAGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GACTCCACAGCCTCGATCATGGCATTCAGGGCCTCTTaGGCTCGGGGCTCGGGGCTTCTCTTGCGCACAGCC | + |
Preference number: 6 (lower is better) Translates to: DSTASIMAFRAS*ARGSGLLLRTA Trigger: GGCTGTGCGCAAGAGAAGCCCCGAGCCCCGAGCCCAAGAGGCCCTGAATGCCATGATCGAGGCTGTGGAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | GGACTCCACAGCCTCGATCATGGCATTCAGGGCCTCTaGGGCTCGGGGCTCGGGGCTTCTCTTGCGCACAGC | + |
Preference number: 6 (lower is better) Translates to: GLHSLDHGIQGL*GSGLGASLAHS Trigger: GCTGTGCGCAAGAGAAGCCCCGAGCCCCGAGCCCAAGAGGCCCTGAATGCCATGATCGAGGCTGTGGAGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | TCGCAGGAAGGACTCCACAGCCTCGATCATGGCATTCAGGGCCTCTaGGGCTCGGGGCTCGGGGCTTCTCTTGCGCACAGCCTGCAGCAG | + |
Preference number: 6 (lower is better) Translates to: SQEGLHSLDHGIQGL*GSGLGASLAHSLQQ Trigger: CTGCTGCAGGCTGTGCGCAAGAGAAGCCCCGAGCCCCGAGCCCAAGAGGCCCTGAATGCCATGATCGAGGCTGTGGAGTCCTTCCTGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | CCAGAGGAGACATGCCTCGGGTCTGGCCAGAGCCCTTaGCAAAGGGGACATAGTGCTGAAGGCGTCGGCGAC | + |
Preference number: 6 (lower is better) Translates to: PEETCLGSGQSP*QRGHSAEGVGD Trigger: GTCGCCGACGCCTTCAGCACTATGTCCCCTTTGCCAAGGGCTCTGGCCAGACCCGAGGCATGTCTCCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | GGGCTTGCCATTCCCTGGTTCCGGTTCCGAGGCTCCATCGATCCTTaGGTTGGCCAGCTCCTCCCTGATCTCCCTGAGCATGTCCTCCCG | + |
Preference number: 6 (lower is better) Translates to: GLAIPWFRFRGSIDP*VGQLLPDLPEHVLP Trigger: CGGGAGGACATGCTCAGGGAGATCAGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGCCTCGGAACCGGAACCAGGGAATGGCAAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | TCTCTGGGTCTGGTTCCCGAAGCACCAGAGGAGACATaGCTCGGGTCTGGCCAGAGCCCTTGGCAAAGGGGA | + |
Preference number: 6 (lower is better) Translates to: SLGLVPEAPEET*LGSGQSPWQRG Trigger: TCCCCTTTGCCAAGGGCTCTGGCCAGACCCGAGGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | GGTTGGCCAGAGGTGCGAGTGTCTTCCAGGATGGGCTaGAGCACCTCCTCCCAAAATCTCCGGTGGGCTCTA | + |
Preference number: 6 (lower is better) Translates to: GWPEVRVSSRMG*STSSQNLRWAL Trigger: TAGAGCCCACCGGAGATTTTGGGAGGAGGTGCTGCAGCCCATCCTGGAAGACACTCGCACCTCTGGCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | CCCTCCTTCACCCGCACAGGTCCTTCCAGCAGCAGCTaGCTGGTATACTCAGGGGCAACCCCTAGTACAGGA | + |
Preference number: 6 (lower is better) Translates to: PSFTRTGPSSSS*LVYSGATPSTG Trigger: TCCTGTACTAGGGGTTGCCCCTGAGTATACCAGGCAGCTGCTGCTGGAAGGACCTGTGCGGGTGAAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GCCTCCCTCTCCTATCTCCCAGTGTCTCCGGTCCTCTaGTGGCAGGCGGGGCATCCCAAACATGCTGAATGT | + |
Preference number: 6 (lower is better) Translates to: ASLSYLPVSPVL*WQAGHPKHAEC Trigger: ACATTCAGCATGTTTGGGATGCCCCGCCTGCCACCAGAGGACCGGAGACACTGGGAGATAGGAGAGGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | CCAAAGGTTGGCCAGAGGTGCGAGTGTCTTCCAGGATaGGCTGCAGCACCTCCTCCCAAAATCTCCGGTGGG | + |
Preference number: 6 (lower is better) Translates to: PKVGQRCECLPG*AAAPPPKISGG Trigger: CCCACCGGAGATTTTGGGAGGAGGTGCTGCAGCCCATCCTGGAAGACACTCGCACCTCTGGCCAACCTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | CGGGGAGCTTGGAATCAAGGTACCGTAGCCAGAGTCTaGGGCGTCATCCGGCATGGAGGGCGTGTCTTCATC | + |
Preference number: 6 (lower is better) Translates to: RGAWNQGTVARV*GVIRHGGRVFI Trigger: GATGAAGACACGCCCTCCATGCCGGATGACGCCTCAGACTCTGGCTACGGTACCTTGATTCCAAGCTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | CCTCGCTGGAGGGCTCTAGCACCTCATAGGGTCCTATaGGCTGGGCCACAGCCATCAAACTCTCCTGCTCTT | + |
Preference number: 6 (lower is better) Translates to: PRWRALAPHRVL*AGPQPSNSPAL Trigger: AAGAGCAGGAGAGTTTGATGGCTGTGGCCCAGCGCATAGGACCCTATGAGGTGCTAGAGCCCTCCAGCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | TCCCTCTCCTATCTCCCAGTGTCTCCGGTCCTCTGGTaGCAGGCGGGGCATCCCAAACATGCTGAATGTGTG | + |
Preference number: 6 (lower is better) Translates to: SLSYLPVSPVLW*QAGHPKHAECV Trigger: CACACATTCAGCATGTTTGGGATGCCCCGCCTGCCACCAGAGGACCGGAGACACTGGGAGATAGGAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | CCTTCACCCGCACAGGTCCTTCCAGCAGCAGCTGCCTaGTATACTCAGGGGCAACCCCTAGTACAGGAGTCA | + |
Preference number: 6 (lower is better) Translates to: PSPAQVLPAAAA*YTQGQPLVQES Trigger: TGACTCCTGTACTAGGGGTTGCCCCTGAGTATACCAGGCAGCTGCTGCTGGAAGGACCTGTGCGGGTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GAGGTGGATCAACAGGAAGCTGTTGGGGTCTCGCAGTaGTCGGCACACGAGTTTCTCCAGCATGAGGGGAGG | + |
Preference number: 6 (lower is better) Translates to: EVDQQEAVGVSQ*SAHEFLQHEGR Trigger: CCTCCCCTCATGCTGGAGAAACTCGTGTGCCGACCACTGCGAGACCCCAACAGCTTCCTGTTGATCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | TTCCCTGGTTCCGGTTCCGAGGCTCCATCGATCCTTTaGTTGGCCAGCTCCTCCCTGATCTCCCTGAGCATG | + |
Preference number: 6 (lower is better) Translates to: FPGSGSEAPSIL*LASSSLISLSM Trigger: CATGCTCAGGGAGATCAGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGCCTCGGAACCGGAACCAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | AGCTGTATGATGTGGGGGACCCTCATTCTCTGCAGCTaGGCTAGAGTCAGCCTCCGGGGCTTGCCATTCCCT | + |
Preference number: 6 (lower is better) Translates to: SCMMWGTLILCS*ARVSLRGLPFP Trigger: AGGGAATGGCAAGCCCCGGAGGCTGACTCTAGCCCAGCTGCAGAGAATGAGGGTCCCCCACATCATACAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | GCCCCCGTAAGTCTCAATTCGGGAAGCTACCAGGCCTaGGAGGGGGCCCTCATTTGGAGGACCAAAGGCTTG | + |
Preference number: 6 (lower is better) Translates to: APVSLNSGSYQA*EGALIWRTKGL Trigger: CAAGCCTTTGGTCCTCCAAATGAGGGCCCCCTCCAAGGCCTGGTAGCTTCCCGAATTGAGACTTACGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | GGCTGCAGCACCTCCTCCCAAAATCTCCGGTGGGCTCTAATCAGGTaGGGGACATTTCCAAACAGGGTCTCAGCCGACACCTCAGTCAGC | + |
Preference number: 6 (lower is better) Translates to: GCSTSSQNLRWALIR*GTFPNRVSADTSVS Trigger: GCTGACTGAGGTGTCGGCTGAGACCCTGTTTGGAAATGTCCCCAACCTGATTAGAGCCCACCGGAGATTTTGGGAGGAGGTGCTGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | CTCCGTGCCCTGGTTGCGATAGAGGGCCAGCAGCTCCCTCTTCTGTaGAATGTACTGCTCACCCTTCAGCTTCTGCAGAGTGGTCTGAGC | + |
Preference number: 6 (lower is better) Translates to: LRALVAIEGQQLPLL*NVLLTLQLLQSGLS Trigger: GCTCAGACCACTCTGCAGAAGCTGAAGGGTGAGCAGTACATTCAACAGAAGAGGGAGCTGCTGGCCCTCTATCGCAACCAGGGCACGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | GGTCCTCTGGTGGCAGGCGGGGCATCCCAAACATGCTaGATGTGTGCAGCCTTATTTCTAGCTCATGGGCCC | + |
Preference number: 6 (lower is better) Translates to: GPLVAGGASQTC*MCAALFLAHGP Trigger: GGGCCCATGAGCTAGAAATAAGGCTGCACACATTCAGCATGTTTGGGATGCCCCGCCTGCCACCAGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | ATGTACTGCTCACCCTTCAGCTTCTGCAGAGTGGTCTaGGCATGCTGGGTCTTCTCCAGCCACCGTGCACGC | + |
Preference number: 6 (lower is better) Translates to: MYCSPFSFCRVV*ACWVFSSHRAR Trigger: GCGTGCACGGTGGCTGGAGAAGACCCAGCATGCTCAGACCACTCTGCAGAAGCTGAAGGGTGAGCAGTACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | CTTCATCTGTATCCTCAGTCACCACCAGGCGGGGGATaGTGGCGAACTCTAAAGTCCTCCCCTCGGCACTGC | + |
Preference number: 6 (lower is better) Translates to: LHLYPQSPPGGG*WRTLKSSPRHC Trigger: GCAGTGCCGAGGGGAGGACTTTAGAGTTCGCCATCATCCCCCGCCTGGTGGTGACTGAGGATACAGATGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | AGTGGTCTGAGCATGCTGGGTCTTCTCCAGCCACCGTaGACGCTCTGTAGAACTGGGACAGTGCACAGTGAG | + |
Preference number: 6 (lower is better) Translates to: SGLSMLGLLQPP*TLCRTGTVHSE Trigger: CTCACTGTGCACTGTCCCAGTTCTACAGAGCGTGCACGGTGGCTGGAGAAGACCCAGCATGCTCAGACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | TGGGCCGACCCCAAAATAGCTTCCATGCCTCTTCTCTaGGTCTGGTTCCCGAAGCACCAGAGGAGACATGCC | + |
Preference number: 6 (lower is better) Translates to: WADPKIASMPLL*VWFPKHQRRHA Trigger: GGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGAAGAGGCATGGAAGCTATTTTGGGGTCGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | AGGAGTTCCCACAGTGCTTCCTGCTGGTGGCAAAGCTaGCGGTTCATCTCCTTGTGTTCCAGCACCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: RSSHSASCWWQS*RFISLCSSTSS Trigger: GGAGCTGGTGCTGGAACACAAGGAGATGAACCGCCAGCTTTGCCACCAGCAGGAAGCACTGTGGGAACTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | GGGAGGACGGATGACCTTGGCTCTGTCCGCCTTGCGTaGAGGTTTGGTTACCAGGAGCACATCGGAGAAGAG | + |
Preference number: 6 (lower is better) Translates to: GRTDDLGSVRLA*RFGYQEHIGEE Trigger: CTCTTCTCCGATGTGCTCCTGGTAACCAAACCTCAACGCAAGGCGGACAGAGCCAAGGTCATCCGTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | ATTCCCTGGTTCCGGTTCCGAGGCTCCATCGATCCTTaGGTTGGCCAGCTCCTCCCTGATCTCCCTGAGCAT | + |
Preference number: 6 (lower is better) Translates to: IPWFRFRGSIDP*VGQLLPDLPEH Trigger: ATGCTCAGGGAGATCAGGGAGGAGCTGGCCAACCAAAGGATCGATGGAGCCTCGGAACCGGAACCAGGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | TGGGGCTTGATGAGCAAGTCACCCAGCGTCTGTCTTCCGGAGCGCTaGTGTTTCTCACACCACTGCACGAAGGTGTGGAACAGTGGGTTC | + |
Preference number: 6 (lower is better) Translates to: WGLMSKSPSVCLPER*CFSHHCTKVWNSGF Trigger: GAACCCACTGTTCCACACCTTCGTGCAGTGGTGTGAGAAACACAAGCGCTCCGGAAGACAGACGCTGGGTGACTTGCTCATCAAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | CCACATTCCCTGATGCCAAAGTCTCGTCTTCCTCCTCCGACCAGATaGGTGGGGCTCTCCTGGGTAGACTGCCTCCTCTTAGGATCCCTT | + |
Preference number: 6 (lower is better) Translates to: PHSLMPKSRLPPPTR*VGLSWVDCLLLGSL Trigger: AAGGGATCCTAAGAGGAGGCAGTCTACCCAGGAGAGCCCCACCAATCTGGTCGGAGGAGGAAGACGAGACTTTGGCATCAGGGAATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | GGAGGACGGATGACCTTGGCTCTGTCCGCCTTGCGTTaGGGTTTGGTTACCAGGAGCACATCGGAGAAGAGA | + |
Preference number: 6 (lower is better) Translates to: GGRMTLALSALR*GLVTRSTSEKR Trigger: TCTCTTCTCCGATGTGCTCCTGGTAACCAAACCTCAACGCAAGGCGGACAGAGCCAAGGTCATCCGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | GGTGGCAGGCGGGGCATCCCAAACATGCTGAATGTGTaGAGCCTTATTTCTAGCTCATGGGCCCTGGTGACT | + |
Preference number: 6 (lower is better) Translates to: GGRRGIPNMLNV*SLISSSWALVT Trigger: AGTCACCAGGGCCCATGAGCTAGAAATAAGGCTGCACACATTCAGCATGTTTGGGATGCCCCGCCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GACCCCAAAATAGCTTCCATGCCTCTTCTCTGGGTCTaGTTCCCGAAGCACCAGAGGAGACATGCCTCGGGT | + |
Preference number: 6 (lower is better) Translates to: DPKIASMPLLWV*FPKHQRRHASG Trigger: ACCCGAGGCATGTCTCCTCTGGTGCTTCGGGAACCAGACCCAGAGAAGAGGCATGGAAGCTATTTTGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GCCATCAAACTCTCCTGCTCTTCACCCTGTCGGACCTaGCCATTTATGTGTCGCAGGAAGGACTCCACAGCC | + |
Preference number: 6 (lower is better) Translates to: AIKLSCSSPCRT*PFMCRRKDSTA Trigger: GGCTGTGGAGTCCTTCCTGCGACACATAAATGGCCAGGTCCGACAGGGTGAAGAGCAGGAGAGTTTGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | AGGTACCGTAGCCAGAGTCTGAGGCGTCATCCGGCATaGAGGGCGTGTCTTCATCTGTATCCTCAGTCACCA | + |
Preference number: 6 (lower is better) Translates to: RYRSQSLRRHPA*RACLHLYPQSP Trigger: TGGTGACTGAGGATACAGATGAAGACACGCCCTCCATGCCGGATGACGCCTCAGACTCTGGCTACGGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | CCACTGCACGAAGGTGTGGAACAGTGGGTTCGTGTCTaGCTGCTCCCGCGCATAAGCCATGGTCTGCTTTAC | + |
Preference number: 6 (lower is better) Translates to: PLHEGVEQWVRV*LLPRISHGLLY Trigger: GTAAAGCAGACCATGGCTTATGCGCGGGAGCAGCAAGACACGAACCCACTGTTCCACACCTTCGTGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | CTGATGCCAAAGTCTCGTCTTCCTCCTCCGACCAGATaGGTGGGGCTCTCCTGGGTAGACTGCCTCCTCTTA | + |
Preference number: 6 (lower is better) Translates to: LMPKSRLPPPTR*VGLSWVDCLLL Trigger: TAAGAGGAGGCAGTCTACCCAGGAGAGCCCCACCAATCTGGTCGGAGGAGGAAGACGAGACTTTGGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | ATCAGCTCAGTGGTCAGGAGTTCCCACAGTGCTTCCTaGTGGTGGCAAAGCTGGCGGTTCATCTCCTTGTGT | + |
Preference number: 6 (lower is better) Translates to: ISSVVRSSHSAS*WWQSWRFISLC Trigger: ACACAAGGAGATGAACCGCCAGCTTTGCCACCAGCAGGAAGCACTGTGGGAACTCCTGACCACTGAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | CAGCAGCCCCACCCGCTGCAAATTCAGCAGACCAGCTaGCAGGAGATCAGTCATGATCTTGAGCTTTCTCAG | + |
Preference number: 6 (lower is better) Translates to: QQPHPLQIQQTS*QEISHDLELSQ Trigger: CTGAGAAAGCTCAAGATCATGACTGATCTCCTGGCAGCTGGTCTGCTGAATTTGCAGCGGGTGGGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS GCA 72 bp | GTCTGTCTTCCGGAGCGCTTGTGTTTCTCACACCACTaGACGAAGGTGTGGAACAGTGGGTTCGTGTCTTGC | + |
Preference number: 6 (lower is better) Translates to: VCLPERLCFSHH*TKVWNSGFVSC Trigger: GCAAGACACGAACCCACTGTTCCACACCTTCGTGCAGTGGTGTGAGAAACACAAGCGCTCCGGAAGACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | AGGATGGGCTGCAGCACCTCCTCCCAAAATCTCCGGTaGGCTCTAATCAGGTTGGGGACATTTCCAAACAGG | + |
Preference number: 6 (lower is better) Translates to: RMGCSTSSQNLR*ALIRLGTFPNR Trigger: CCTGTTTGGAAATGTCCCCAACCTGATTAGAGCCCACCGGAGATTTTGGGAGGAGGTGCTGCAGCCCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GTGGGTTCGTGTCTTGCTGCTCCCGCGCATAAGCCATaGTCTGCTTTACTCGAAGGCAGTACTGGACGTAAG | + |
Preference number: 6 (lower is better) Translates to: VGSCLAAPAHKP*SALLEGSTGRK Trigger: CTTACGTCCAGTACTGCCTTCGAGTAAAGCAGACCATGGCTTATGCGCGGGAGCAGCAAGACACGAACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GTGTTTCTCACACCACTGCACGAAGGTGTGGAACAGTaGGTTCGTGTCTTGCTGCTCCCGCGCATAAGCCAT | + |
Preference number: 6 (lower is better) Translates to: VFLTPLHEGVEQ*VRVLLLPRISH Trigger: ATGGCTTATGCGCGGGAGCAGCAAGACACGAACCCACTGTTCCACACCTTCGTGCAGTGGTGTGAGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | GTTGAATGTACTGCTCACCCTTCAGCTTCTGCAGAGTaGTCTGAGCATGCTGGGTCTTCTCCAGCCACCGTG | + |
Preference number: 6 (lower is better) Translates to: VECTAHPSASAE*SEHAGSSPATV Trigger: CACGGTGGCTGGAGAAGACCCAGCATGCTCAGACCACTCTGCAGAAGCTGAAGGGTGAGCAGTACATTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | ACCTCCTCCCAAAATCTCCGGTGGGCTCTAATCAGGTaGGGGACATTTCCAAACAGGGTCTCAGCCGACACC | + |
Preference number: 6 (lower is better) Translates to: TSSQNLRWALIR*GTFPNRVSADT Trigger: GGTGTCGGCTGAGACCCTGTTTGGAAATGTCCCCAACCTGATTAGAGCCCACCGGAGATTTTGGGAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 72 bp | ATGAGCAAGTCACCCAGCGTCTGTCTTCCGGAGCGCTaGTGTTTCTCACACCACTGCACGAAGGTGTGGAAC | + |
Preference number: 6 (lower is better) Translates to: MSKSPSVCLPER*CFSHHCTKVWN Trigger: GTTCCACACCTTCGTGCAGTGGTGTGAGAAACACAAGCGCTCCGGAAGACAGACGCTGGGTGACTTGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CAA 90 bp | TTTCTCACACCACTGCACGAAGGTGTGGAACAGTGGGTTCGTGTCTaGCTGCTCCCGCGCATAAGCCATGGTCTGCTTTACTCGAAGGCA | + |
Preference number: 6 (lower is better) Translates to: FLTPLHEGVEQWVRV*LLPRISHGLLYSKA Trigger: TGCCTTCGAGTAAAGCAGACCATGGCTTATGCGCGGGAGCAGCAAGACACGAACCCACTGTTCCACACCTTCGTGCAGTGGTGTGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | AGGAAGCCATTTTGTAAGCTGACAGGATCCAAAGGTTaGCCAGAGGTGCGAGTGTCTTCCAGGATGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: RKPFCKLTGSKG*PEVRVSSRMGC Trigger: GCAGCCCATCCTGGAAGACACTCGCACCTCTGGCCAACCTTTGGATCCTGTCAGCTTACAAAATGGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS CCA 72 bp | CTGGGACAGTGCACAGTGAGGGCACTGGAGACACACTaGAATTCTGTGAGGTGGATCAACAGGAAGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: LGQCTVRALETH*NSVRWINRKLL Trigger: CAACAGCTTCCTGTTGATCCACCTCACAGAATTCCAGTGTGTCTCCAGTGCCCTCACTGTGCACTGTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |
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CDS TCA 72 bp | ACCGCTGGCCAAATGTCAGGAAGCCATTTTGTAAGCTaGCAGGATCCAAAGGTTGGCCAGAGGTGCGAGTGT | + |
Preference number: 6 (lower is better) Translates to: TAGQMSGSHFVS*QDPKVGQRCEC Trigger: ACACTCGCACCTCTGGCCAACCTTTGGATCCTGTCAGCTTACAAAATGGCTTCCTGACATTTGGCCAGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042647.7 |